Miyakogusa Predicted Gene

Lj2g3v2925180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2925180.1 Non Chatacterized Hit- tr|I1MWX3|I1MWX3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57433 PE,90.51,0,GB DEF:
HYPOTHETICAL PROTEIN T5K6_30,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
TRAPPC9-Trs120,TRAPP II ,gene.g43939.t1.1
         (770 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11040.1 | Symbols: TRS120, AtTRS120 | TRS120 | chr5:3495332-...  1105   0.0  

>AT5G11040.1 | Symbols: TRS120, AtTRS120 | TRS120 |
            chr5:3495332-3500610 FORWARD LENGTH=1186
          Length = 1186

 Score = 1105 bits (2859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/772 (71%), Positives = 629/772 (81%), Gaps = 19/772 (2%)

Query: 1    MYHQSVVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLIPPAGQHG 60
            M+H S+VSLFES WSTLQMVVLREILLSAVRAGDPL AWSAAARLLR +YPLI P+GQ+G
Sbjct: 431  MHHHSIVSLFESHWSTLQMVVLREILLSAVRAGDPLAAWSAAARLLRWHYPLITPSGQNG 490

Query: 61   LANALLNSAERLPPGTRCADPALPFIRLHSFPLHPIQMDIVKRNPAREDWWAGSAPSGPF 120
            LAN+L NSA+RLP GTRCADPALPF+RL SFPLH  Q+DIVKRNPAREDWW GSAPSGPF
Sbjct: 491  LANSLANSADRLPSGTRCADPALPFVRLFSFPLHSSQVDIVKRNPAREDWWTGSAPSGPF 550

Query: 121  IYTPFSKGEPNNMKKQELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVS 180
            IYTPFSKG+ N   KQELIWVVGEPVQVLVELANPC FDLR+DSIYLS HS NFDAFPVS
Sbjct: 551  IYTPFSKGDANESSKQELIWVVGEPVQVLVELANPCCFDLRIDSIYLSAHSSNFDAFPVS 610

Query: 181  VSLLPNSSKVITLSGIPTSVGTVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDP 240
            V + PNS+KVITLSGIPT+VG VTIPGC VHCFGVITEH+FR+VDNLLLGAAQGLV SDP
Sbjct: 611  VDIPPNSAKVITLSGIPTAVGPVTIPGCTVHCFGVITEHVFRDVDNLLLGAAQGLVFSDP 670

Query: 241  FRCCGSPKLKNVSVPNISVVQPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVQIE 300
            FR CGS KL++V VPNISV  PLPLL+++VVGGDGAIILYEGEIR+V I+ ANAGTV I 
Sbjct: 671  FRSCGSAKLRHVFVPNISVAPPLPLLVANVVGGDGAIILYEGEIREVCINFANAGTVPIV 730

Query: 301  QAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTFPVTLRAWQVGSVDTDTGV--GRTV 358
            QAH+SLSGKNQD+VIS + E L+S LPLKPGA+VT PVTL+AW VG  D+D  +  GR  
Sbjct: 731  QAHVSLSGKNQDAVISIADEALQSALPLKPGAQVTLPVTLKAWHVGPTDSDNTMSSGRNA 790

Query: 359  SGSNMRHSKDGSDPSLLIHYAGPLKTSEEPLTNGSTVPPGRRLIVPLQICVLQGLSFVKA 418
            +G+  R  KDG+ PSLLIHYAGPL  + +     S VPPGRRL+VPLQICVLQGLSFVKA
Sbjct: 791  AGNTGR-PKDGTSPSLLIHYAGPLSNNGDSQEKESIVPPGRRLVVPLQICVLQGLSFVKA 849

Query: 419  QLLSMEFPAHVGENLPKLDDMDNKSPGEHVKSETKMDRLVKIDPFRGSWGLRFLELELSN 478
            +LLSME PAHV +NL            E ++ E+  D LVKI+PFRGSWGLRFLELELSN
Sbjct: 850  RLLSMEIPAHVSDNLRD----------EDIERESNADSLVKINPFRGSWGLRFLELELSN 899

Query: 479  PTDVAFEINVSVKLENSSNEDNHLADQGATEYGYPKTRIDRDCSARVLVPLEHFKLPVLD 538
            PTDV FEI+V V+LENS+ ED+    Q + EY YPKTRIDRD SARVL+PLEHFKLPVLD
Sbjct: 900  PTDVVFEISVFVQLENSAKEDDSSPVQDSPEYEYPKTRIDRDYSARVLIPLEHFKLPVLD 959

Query: 539  DSFFMKXXXXXXXXXXXXXSFSEKSTKAELNACIKNLISRIKVQWHSGRNSSGELNIRDA 598
             SFF K             SFSEK+TKAE+N  IKNLIS+IKV+W SGRNSSGEL+I+DA
Sbjct: 960  GSFFTKDPPPGSPSSSRNPSFSEKNTKAEINTLIKNLISKIKVRWQSGRNSSGELDIKDA 1019

Query: 599  IQAALQTSVMDVLLPDPLTFGFRLVRDGFESEKLDSDKESDIIESPASKDSVLAHEMTPM 658
            IQ ALQT+VMDVLLPDPLTFGFRLVR+G E      D E+   ESP SK SVL+HE+TPM
Sbjct: 1020 IQTALQTTVMDVLLPDPLTFGFRLVRNGLE-----KDPETK-AESPFSKGSVLSHEVTPM 1073

Query: 659  EVVVRNNTKDMIKMSLNITCRDVAGENCVDGIKATVLWTGVLSDITMEIPPLQQIKHSFC 718
            EV+VRNNT + IK++L++TCRDVAG+NC +G  ATVLW G LS I+ME+ PLQ+ +H F 
Sbjct: 1074 EVLVRNNTSEAIKLNLSVTCRDVAGQNCTEGADATVLWAGALSGISMEVAPLQEARHCFS 1133

Query: 719  LHFFVPGEYTLLAAAVIEDASDILRARAKTTSAAEPIFCRGPPYHVRVVGTA 770
            L F VPGEYT++AAAVIEDA+++LRARA T S  EPIFCRGPP+HV V G A
Sbjct: 1134 LFFLVPGEYTMVAAAVIEDANNVLRARAGTASPNEPIFCRGPPFHVCVAGGA 1185