Miyakogusa Predicted Gene
- Lj2g3v2925160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2925160.1 NODE_49629_length_3728_cov_36.261803.path2.1
(968 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 1002 0.0
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 258 2e-68
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 253 4e-67
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 249 9e-66
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 227 4e-59
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 225 1e-58
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 218 2e-56
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 202 8e-52
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 160 3e-39
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 159 1e-38
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 159 1e-38
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 158 1e-38
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 158 2e-38
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 157 3e-38
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 157 4e-38
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 153 7e-37
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 152 1e-36
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 147 5e-35
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 145 2e-34
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 143 5e-34
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 142 8e-34
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 142 8e-34
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 142 9e-34
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 142 1e-33
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 141 2e-33
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 141 2e-33
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 140 3e-33
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 139 1e-32
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 138 2e-32
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 138 2e-32
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 137 3e-32
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 137 4e-32
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 136 6e-32
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 135 1e-31
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 134 3e-31
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 134 3e-31
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 133 6e-31
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 132 1e-30
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-... 132 2e-30
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 131 3e-30
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 130 3e-30
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 129 8e-30
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 128 3e-29
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489911-1... 127 4e-29
AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein | ch... 126 7e-29
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 122 1e-27
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 122 1e-27
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 122 1e-27
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 121 2e-27
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 121 3e-27
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 120 5e-27
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 119 8e-27
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 118 2e-26
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 117 3e-26
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 116 7e-26
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 116 9e-26
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 115 1e-25
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 115 1e-25
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 108 2e-23
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 108 2e-23
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 108 2e-23
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 97 4e-20
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 97 4e-20
AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH pro... 97 7e-20
AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fam... 95 3e-19
AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosph... 91 3e-18
AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosph... 55 3e-07
AT5G16930.1 | Symbols: | AAA-type ATPase family protein | chr5:... 51 4e-06
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/980 (55%), Positives = 675/980 (68%), Gaps = 34/980 (3%)
Query: 1 MPGTEVAVAPKRRKRISDSAGDSHLESCNKEHTAKMLLRVQDPDGLCSTSTHVKGVELHV 60
+PGTEVAVAPKRR R + A S + CN K LLRVQ+ D VKG EL V
Sbjct: 173 VPGTEVAVAPKRRDR-NLKAKKSQEKECN---NVKALLRVQETDRSAFHEADVKGFELRV 228
Query: 61 GLTSVAFVHPETAKLFSFNMLQLVSIVPRVSKENVNIPRTNIMKAKGGSAFNEVENG-ST 119
LTS+A++HPETAK S LQL+S+ PR+ + + + + K A ENG S+
Sbjct: 229 ALTSIAYIHPETAKKHSLESLQLISVSPRIPLKG-SAKKDEALNMKNSEASKVAENGTSS 287
Query: 120 DKKEYRQALVHLLISESVAEGHVMVAKSLRLYLRAGLHSWVYLKACDVILEKSIPSISIC 179
KKE RQA++ L+ S+ A+GH+M+ +SLRLYL AGLHSWVYL+ C+V +K IP++S+
Sbjct: 288 AKKEPRQAILRLVFSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLS 347
Query: 180 HCQFKLLRKEMAVEKDGLEVLHGQKNHSDEKLHAKATSGVIVDTLDWSIQHAFTXXXXXX 239
C FK+ E ++K G + L G N + H + VD +DWS+
Sbjct: 348 PCVFKISENEKVLDK-GTDRL-GNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSE 405
Query: 240 XXXXXXXXXXXQFQNQKGLQSLVKLWYIAQLEAITSITGMEVNSLVMGRNTLLQFE---L 296
+N+KGL+ L +LW +AQL+A+ S+TG++V+SL++GR T FE L
Sbjct: 406 GLHDEGNHD----KNKKGLEYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGL 461
Query: 297 SCYKLGSDGKVQLADNSSENSGK-----AAEMLFLLTFGEEHLHHRRLNAYEVAL--GGK 349
YK DG Q + N SGK E+L+++T +E L + Y+++L K
Sbjct: 462 ESYK-SIDG--QPSVNDRWESGKKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEK 518
Query: 350 LNNINDGDFKLFGQMKLGDPVSINSVEERAPEDPVSSNVSSLDWMEKTASDVINRMLVLL 409
+N+ + + +M LG+P+ + S +E VS ++SSL WM SDVI RM VLL
Sbjct: 519 SDNVVHIE-PVLEKMNLGEPIYLKSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLL 577
Query: 410 SSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLAL 469
S A+G+WF + +P PGH+LIYGPPGSGKTILAR AK E KD+LAH+I VSCS LAL
Sbjct: 578 SPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLAL 637
Query: 470 EKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHD-SEGSQPSTSVAGLSDFLVDIM 528
EKV I +++ I E + HAPS++I DDLDSI+S+ +EG+Q S V L+ FL D++
Sbjct: 638 EKVQHIHHVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVI 697
Query: 529 DEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEI 588
D+YGE R SCG GP+AF+A GRFDFH++L APA SER A+LKHEI
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEI 757
Query: 589 QRRHLQCDDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYEHENPALLRE 648
Q+R L C +D+LL++A KC+GYD YDLEILVDR VHAA+ R LP + I ++ L++E
Sbjct: 758 QKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYN---LVKE 814
Query: 649 DFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAP 708
DF++AMHDF+PVAMRDITKSAS+ GR GW+DVGG+ DI+NAIKEMIELPSKFPK FA++P
Sbjct: 815 DFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSP 874
Query: 709 LRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKAT 768
LRLRSNVLLYGPPGCGKTHIVGAAAAA SLRFISVKGPELLNKYIGASEQAVRD+FSKA
Sbjct: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAA 934
Query: 769 AAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLD 828
AAAPC+LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVE+LTGVFVFAATSRPDLLD
Sbjct: 935 AAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
Query: 829 AALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSGXXXXXX 888
ALLRPGRLDRLL CDFPS ERLEILTVLSRKL MA DIDL +A MTEGFSG
Sbjct: 995 PALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQAL 1054
Query: 889 XXXXXXXXVHDILDNVDASRPLKTPVITDALLKLTASKARPSVSEEEKRRLYSIYHQFLD 948
VH+ L+ D TP+ITD LLK ASK +PSVSE EK++LY IY QFLD
Sbjct: 1055 LSDAQLAAVHEYLNREDKPETGTTPIITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLD 1114
Query: 949 SKRSVAAQSRDAKGKRATLA 968
S++S SR+AKGKRATLA
Sbjct: 1115 SRKS----SREAKGKRATLA 1130
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 283/588 (48%), Gaps = 63/588 (10%)
Query: 404 RMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLE------NHKDILA 457
R LV L F S + P +L+YGPPGSGKT++AR +A N +I+
Sbjct: 220 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM- 278
Query: 458 HIIFVSCSKLALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSV 517
SKLA E +R+ EA +APSI+ D++DSI + + +
Sbjct: 279 -------SKLAGESESNLRK----AFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI 327
Query: 518 AGLSDFLVDIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAA 577
L+ +MD + + + GRFD I + P
Sbjct: 328 VSQ---LLTLMDGLKSRAH-------VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 377
Query: 578 SERKAMLKHEIQRRHLQCDDDVLLD-VAVKCDGYDGYDLEILVDRTVHAAVCRFLPANAT 636
R +L+ I ++++ +DV L+ ++ GY G DL L T A C +
Sbjct: 378 IGRLEVLR--IHTKNMKLAEDVDLERISKDTHGYVGADLAALC--TEAALQCIREKMDVI 433
Query: 637 IYEHEN--------PALLREDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQN 688
E ++ A+ E F A+ + P A+R+ + W+D+GGL +++
Sbjct: 434 DLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPN---VSWEDIGGLENVKR 490
Query: 689 AIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPEL 748
++E ++ P + P+ F + + VL YGPPGCGKT + A A FISVKGPEL
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 749 LNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTE 805
L + G SE VR++F KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE
Sbjct: 551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTE 610
Query: 806 LDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMA 865
+DG+ VF+ AT+RPD++D+ALLRPGRLD+L++ P RL I RK P+A
Sbjct: 611 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVA 670
Query: 866 SDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHD-ILDNVDASR-------PLKTPVITD 917
D+D+ +A T+GFSG + + I +++ R ++ ++ D
Sbjct: 671 KDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDD 730
Query: 918 ALLKLTASK-------ARPSVSEEEKRRLYSIYHQFLDSKRSVAAQSR 958
+ ++ A+ AR SVS+ + R+ Y + Q L R ++ R
Sbjct: 731 EVSEIRAAHFEESMKYARRSVSDADIRK-YQAFAQTLQQSRGFGSEFR 777
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%)
Query: 676 GWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 735
G+DDVGG+ I+E++ELP + P+ F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 795
+ F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 796 DRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RLE+L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 856 TVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVD 905
+ ++ + +A D+DL ++ T G+ G + + +D +D
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 253 bits (647), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 248/497 (49%), Gaps = 47/497 (9%)
Query: 404 RMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLE------NHKDILA 457
R LV L F S + P +L+YGPPGSGKT++AR +A N +I+
Sbjct: 221 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM- 279
Query: 458 HIIFVSCSKLALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSV 517
SKLA E +R+ EA +APSI+ D++DSI + + +
Sbjct: 280 -------SKLAGESESNLRK----AFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI 328
Query: 518 AGLSDFLVDIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAA 577
L+ +MD + + + GRFD I + P
Sbjct: 329 VSQ---LLTLMDGLKSRAH-------VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
Query: 578 SERKAMLKHEIQRRHLQCDDDVLLD-VAVKCDGYDGYDLEILVDRTVHAAVCRFLPANAT 636
R +L+ I ++++ +DV L+ V+ GY G DL L T A C +
Sbjct: 379 IGRLEVLR--IHTKNMKLAEDVDLERVSKDTHGYVGADLAALC--TEAALQCIREKMDVI 434
Query: 637 IYEHE--------NPALLREDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQN 688
+ E + A+ + F A+ + P A+R+ + W+D+GGL +++
Sbjct: 435 DLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPN---VSWEDIGGLENVKR 491
Query: 689 AIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPEL 748
++E ++ P + P+ F + + VL YGPPGCGKT + A A FIS+KGPEL
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 551
Query: 749 LNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTE 805
L + G SE VR++F KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTE 611
Query: 806 LDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMA 865
+DG+ VF+ AT+RPD++D ALLRPGRLD+L++ P R +I RK P+A
Sbjct: 612 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVA 671
Query: 866 SDIDLGTVANMTEGFSG 882
D+DL +A T+GFSG
Sbjct: 672 KDVDLRALAKYTQGFSG 688
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%)
Query: 676 GWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 735
G+DDVGG+ I+E++ELP + P+ F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 795
+ F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 796 DRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RLE+L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 856 TVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVD 905
+ ++ + +A D+DL V+ T G+ G + + +D +D
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVID 435
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 249 bits (635), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 249/498 (50%), Gaps = 48/498 (9%)
Query: 404 RMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLE------NHKDILA 457
R LV L F S + P +L+YGPPGSGKT++AR +A N +I+
Sbjct: 220 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM- 278
Query: 458 HIIFVSCSKLALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSV 517
SKLA E +R+ EA +APSI+ D++DSI + + +
Sbjct: 279 -------SKLAGESESNLRK----AFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI 327
Query: 518 AGLSDFLVDIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAA 577
L+ +MD + + + GRFD I + P
Sbjct: 328 VSQ---LLTLMDGLKSRAH-------VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 377
Query: 578 SERKAMLKHEIQRRHLQCDDDVLLD-VAVKCDGYDGYDLEILVDRTVHAAVCRFLPANAT 636
R +L+ I ++++ +DV L+ ++ GY G DL L T A C +
Sbjct: 378 IGRLEVLR--IHTKNMKLAEDVDLERISKDTHGYVGADLAALC--TEAALQCIREKMDVI 433
Query: 637 IYEHEN--------PALLREDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQN 688
E ++ A+ E F A+ + P A+R+ + W+D+GGL +++
Sbjct: 434 DLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPN---VSWNDIGGLENVKR 490
Query: 689 AIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPEL 748
++E ++ P + P+ F + + VL YGPPGCGKT + A A FISVKGPEL
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 749 LNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKR----GHDNTGVTDRVVNQFLT 804
L + G SE VR++F KA +APC+LFFDE DSIA +R G D G DRV+NQ LT
Sbjct: 551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLT 610
Query: 805 ELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPM 864
E+DG+ VF+ AT+RPD++D+ALLRPGRLD+L++ P RL I RK P+
Sbjct: 611 EMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPI 670
Query: 865 ASDIDLGTVANMTEGFSG 882
A D+D+G +A T+GFSG
Sbjct: 671 AKDVDIGALAKYTQGFSG 688
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%)
Query: 676 GWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 735
G+DDVGG+ I+E++ELP + P+ F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 795
+ F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 796 DRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RLE+L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 856 TVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVD 905
+ ++ + +A D+DL ++ T G+ G + + +D +D
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 243/487 (49%), Gaps = 35/487 (7%)
Query: 404 RMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVS 463
R L++ L + L P +L+YGPPG+GKT L R + + + AH+I +S
Sbjct: 35 RELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD------AHLIVLS 88
Query: 464 CSKL----ALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAG 519
+ A E ++R+ A + A++ PS++ D++D + D+ Q
Sbjct: 89 PHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQD----VR 144
Query: 520 LSDFLVDIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASE 579
++ L +MD + S + +A GRFD + + P +
Sbjct: 145 IASQLFTLMD----SNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEED 200
Query: 580 RKAMLKHEIQRRHLQCDDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYE 639
R +L+ ++ +L D L +A+ C+GY G DLE A+CR +A+
Sbjct: 201 RLKILQLYTKKVNLDPSVD-LQAIAISCNGYVGADLE---------ALCREATISASKRS 250
Query: 640 HENPALLREDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQNAIKEMIELPSK 699
++ L +DF A P R IT + WDDVGGL D++ +++ +E P K
Sbjct: 251 SDSLILTSQDFKIAKSVVGPSINRGITVEIP---KVTWDDVGGLKDLKKKLQQAVEWPIK 307
Query: 700 FPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQA 759
F + + +LL+GPPGC KT + AAA A+ F S+ EL + Y+G E
Sbjct: 308 HSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEAL 367
Query: 760 VRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG----VTDRVVNQFLTELDGVEILTGV 815
+R+ F +A A+P ++FFDE D +A KRG +++ V +R+++ LTE+DG+E G+
Sbjct: 368 LRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGI 427
Query: 816 FVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVAN 875
V AAT+RP +DAAL+RPGR D +L+ P R EIL V +R + + D+DL +A
Sbjct: 428 LVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAE 487
Query: 876 MTEGFSG 882
T+ F+G
Sbjct: 488 ETDLFTG 494
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 673 GRSGWD---DVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIV 729
G W ++GG A++E+I P ++P L+ +LLYGPPG GKT +V
Sbjct: 14 GNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLV 73
Query: 730 GAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAA----PCLLFFDEFDSIAP 785
A I + + + G SE+ +R+ F++A++ A P ++F DE D + P
Sbjct: 74 RAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCP 133
Query: 786 KRGHDNTGVTD-RVVNQFLTELDGVEILTG---VFVFAATSRPDLLDAALLRPGRLDRLL 841
+R D D R+ +Q T +D + + V V A+T+R D +D AL R GR D L+
Sbjct: 134 RR--DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALV 191
Query: 842 FCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
P+ +RL+IL + ++K+ + +DL +A G+ G
Sbjct: 192 EVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVG 232
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 178/563 (31%), Positives = 262/563 (46%), Gaps = 48/563 (8%)
Query: 417 FGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPIIR 476
F + P +L +GPPG GKT LA +A A + F S A E + +
Sbjct: 259 FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPFYKIS--ATEVISGVS 308
Query: 477 QEIANHINE----AINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYG 532
+I E A APSIV D++D+I S +++ + + L+ MD G
Sbjct: 309 GASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQ---LLTCMDGPG 365
Query: 533 EKRQK-----SCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHE 587
K K S GF + + GRF+ I L AP R +L
Sbjct: 366 NKGDKNAPDSSAGF--VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVV 423
Query: 588 IQRRHLQCDDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYE---HENPA 644
Q+ L+ D +A G+ G DLE + A+ R L + + ++ +
Sbjct: 424 AQKLRLEGPFDKKR-IARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKS 482
Query: 645 LLREDFSQAMHDFLPVAMRD-------ITKSASDDGRS-----GWDDVGGLVDIQNAIKE 692
LR + + + L V M D + S + +G S WDDVGGL ++
Sbjct: 483 WLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNR 542
Query: 693 MIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKY 752
I P K P + + L + LLYGPPGCGKT I AAA + F+ +KG ELLNKY
Sbjct: 543 YIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKY 602
Query: 753 IGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEIL 812
+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQFL ELDG E
Sbjct: 603 VGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGE-R 661
Query: 813 TGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDL-G 871
V+V AT+RPD++D A LRPGR LL+ P+ ER IL ++RK P+ +DL G
Sbjct: 662 RNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDG 721
Query: 872 TVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVDASRPLKTPVITDALLKL-----TASK 926
N EGFSG V +++ + ++S T IT +K S
Sbjct: 722 IAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTD-ITQCTIKTRHFEQALSL 780
Query: 927 ARPSVSEEEKRRLYSIYHQFLDS 949
PSV+++++R ++ + +S
Sbjct: 781 VSPSVNKQQRRHYDALSTKLQES 803
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D GG+ I + ++ + P P+ F + ++ S +L +GPPGCGKT + A A +
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 797 RVVNQFLTELDG---------VEILTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 846
R+V Q LT +DG + G V V AT+RPD LD AL R GR + + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 847 SWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDN 903
R EIL+V+++KL + D +A +T GF G + ILD+
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDS 468
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 156/237 (65%), Gaps = 5/237 (2%)
Query: 648 EDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQA 707
EDF A P AMR++ + W+DVGG +++N + E +E P K F +
Sbjct: 697 EDFENAKTKIRPSAMREVILEVP---KVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRI 753
Query: 708 PLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKA 767
R S +L++GPPGC KT + A A+ + L F++VKGPEL +K++G SE+AVR +F+KA
Sbjct: 754 GTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKA 813
Query: 768 TAAAPCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGVEILTGVFVFAATSRPD 825
A AP ++FFDE DS+A RG +N G V+DRV++Q L ELDG+ GV V AAT+RPD
Sbjct: 814 RANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPD 873
Query: 826 LLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+D+ALLRPGR DRLL+ P+ +R IL + RK+P +SDI L +A++T+G++G
Sbjct: 874 KIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTG 930
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 709 LRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKAT 768
LR VL++GPPG GKT + A S + F SV GPE++++Y+G SE+A+ +VF A+
Sbjct: 415 LRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSAS 474
Query: 769 AAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLD 828
A P ++F D+ D+IAP R ++ R+V L +DG+ GV V AAT+RPD ++
Sbjct: 475 NATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIE 534
Query: 829 AALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMA-SDIDLGTVANMTEGFSG 882
AL RPGRLDR + PS +R +IL ++ R + + S+I + +A T GF G
Sbjct: 535 PALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVG 589
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 425 PGHVLIYGPPGSGKTILARTLAKSLE-NHKDILAHIIFVSCSKLALEKVPIIRQEIANHI 483
P +L++GPPG KT++AR +A + N + +F SK E +R A
Sbjct: 758 PSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELF---SKWVGESEKAVRSLFA--- 811
Query: 484 NEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGFGP 543
+A +APSI+ FD++DS+ S E S S +S LV++ + + G
Sbjct: 812 -KARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVEL-----DGLHQRVG--- 862
Query: 544 IAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLL-D 602
+ +A GRFD + + P ++R+A+LK I R + C D+ L +
Sbjct: 863 VTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILK--IHLRKIPCSSDICLKE 920
Query: 603 VAVKCDGYDGYDLEILVDRTVHAAV 627
+A GY G D+ ++ AA+
Sbjct: 921 LASITKGYTGADISLICREAAIAAL 945
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 428 VLIYGPPGSGKTILARTLAKSLE------NHKDILAHIIFVSCSKLALEKVPIIRQEIAN 481
VLI+GPPG+GKT LART A+ N +I++ ++ S+ AL++V
Sbjct: 421 VLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQ--YLGESEKALDEV--------- 469
Query: 482 HINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF 541
A N P++V DDLD+I G + S + L+++MD G R
Sbjct: 470 -FRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVAT---LLNLMD--GISRTDG--- 520
Query: 542 GPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQR--RHLQCDDDV 599
+ +A GR D I + P++++R +L H I R RH + V
Sbjct: 521 --VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDIL-HIILRGMRHSLSNIQV 577
Query: 600 LLDVAVKCDGYDGYDLEILVDRTVHAAVCRFL 631
+A+ G+ G DL L + R L
Sbjct: 578 -EQLAMATHGFVGADLSALCCEAAFVCLRRHL 608
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 153/239 (64%), Gaps = 21/239 (8%)
Query: 647 REDFSQAMHDFLPVAMRDITKSASDDG-----RSGWDDVGGLVDIQNAIKEMIELPSKFP 701
+EDF++A+ R ++AS G WDDVGGL D++ +I + ++LP
Sbjct: 629 KEDFTKALD-------RSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHK 681
Query: 702 KTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVR 761
F+ LR RS VLLYGPPG GKT + A A SL F+SVKGPEL+N YIG SE+ VR
Sbjct: 682 DLFSSG-LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 740
Query: 762 DVFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV-EILTGVFVF 818
D+F KA +A PC++FFDE DS+AP RG D+ GV DRVV+Q L E+DG+ + +F+
Sbjct: 741 DIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFII 800
Query: 819 AATSRPDLLDAALLRPGRLDRLLFCDF---PSWHERLEILTVLSRKLPMASDIDLGTVA 874
A++RPDL+D ALLRPGR D+LL+ S+ ER +L L+RK ++ D+ L +VA
Sbjct: 801 GASNRPDLIDPALLRPGRFDKLLYVGVNADASYRER--VLKALTRKFKLSEDVSLYSVA 857
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+DDV G+ + + E++E K P+ F R+ VLL GPPG GKT + A A +
Sbjct: 219 FDDVAGVDEAKQDFMEVVEFLKK-PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F S+ G E + ++G VRD+F KA APC++F DE D++ +RG G D
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+ +NQ LTE+DG E TGV V AAT+R D+LD+ALLRPGR DR + D P R +
Sbjct: 338 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 397
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL V S S + L +A T GFSG
Sbjct: 398 ILKVHSGNKKFESGVSLEVIAMRTPGFSG 426
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 417 FGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIF--VSCSKLALEKVPI 474
F + +P VL+ GPPG+GKT+LA+ +A A + F +S S+ V +
Sbjct: 245 FTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE--------AGVPFFSISGSEFVEMFVGV 296
Query: 475 IRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEK 534
+ + +A +AP IV D++D++ G Q T + G +D +++ +
Sbjct: 297 GASRVRDLFKKAKENAPCIVFVDEIDAV-------GRQRGTGIGGGNDEREQTLNQLLTE 349
Query: 535 RQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQ 594
G + +A GRFD + + P R +LK + + +
Sbjct: 350 MDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK--VHSGNKK 407
Query: 595 CDDDVLLDV-AVKCDGYDGYDLEILVD 620
+ V L+V A++ G+ G DL L++
Sbjct: 408 FESGVSLEVIAMRTPGFSGADLANLLN 434
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+DDV G+ + + E++E K P+ F ++ VLL GPPG GKT + A A +
Sbjct: 226 FDDVAGVDEAKQDFMEVVEFLKK-PERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEA 284
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F S+ G E + ++G VRD+F KA APC++F DE D++ +RG G D
Sbjct: 285 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 344
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+ +NQ LTE+DG E TGV V AAT+R D+LD+ALLRPGR DR + D P R +
Sbjct: 345 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 404
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL V + +D+ L +A T GFSG
Sbjct: 405 ILKVHAGNKKFDNDVSLEIIAMRTPGFSG 433
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 417 FGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIF--VSCSKLALEKVPI 474
F + +P VL+ GPPG+GKT+LA+ +A A + F +S S+ V +
Sbjct: 252 FTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE--------AGVPFFSISGSEFVEMFVGV 303
Query: 475 IRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEK 534
+ + +A +AP IV D++D++ G Q T + G +D +++ +
Sbjct: 304 GASRVRDLFKKAKENAPCIVFVDEIDAV-------GRQRGTGIGGGNDEREQTLNQLLTE 356
Query: 535 RQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQ 594
G + +A GRFD + + P R +LK + + +
Sbjct: 357 MDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK--VHAGNKK 414
Query: 595 CDDDVLLD-VAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYEHE 641
D+DV L+ +A++ G+ G DL L++ AA+ A +I E
Sbjct: 415 FDNDVSLEIIAMRTPGFSGADLANLLN---EAAILAGRRARTSISSKE 459
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Query: 675 SGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 734
S +D +GGL IKE+IELP K P+ F + VLLYGPPG GKT + A A
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 735 ASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 794
+ FI V G EL+ KYIG + VR++F A AP ++F DE DSI R +G
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 795 TD----RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHE 850
D R + + L +LDG E + V AT+R D+LD ALLRPGR+DR + P+
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 851 RLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R +IL + SRK+ + IDL +A G SG
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASG 369
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 377 ERAPEDPVSSNVSSLDWMEKTASDVINRMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGS 436
E+ P D + LD K +VI L F S + P VL+YGPPG+
Sbjct: 153 EKVP-DSTYDMIGGLDQQIKEIKEVIE-----LPIKHPELFESLGIAQPKGVLLYGPPGT 206
Query: 437 GKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEAINHAPSIVIF 496
GKT+LAR +A +H D I VS S+L + + + + A HAPSI+
Sbjct: 207 GKTLLARAVA----HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 497 DDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF---GPIAFLAXXXXX 553
D++DSI S GS S + +++++++ GF I L
Sbjct: 261 DEIDSIGSARMESGSGNGDS--EVQRTMLELLNQLD-------GFEASNKIKVLMATNRI 311
Query: 554 XXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLLDVAVKCDGYDGY 613
GR D I P P R +LK ++ +L D L +A K +G G
Sbjct: 312 DILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGID-LKKIAEKMNGASGA 370
Query: 614 DLE---------ILVDRTVHAAVCRFLPANATIYEHE 641
+L+ L +R VH F A A + + +
Sbjct: 371 ELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKD 407
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Query: 675 SGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 734
S +D +GGL IKE+IELP K P+ F + VLLYGPPG GKT + A A
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 735 ASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 794
+ FI V G EL+ KYIG + VR++F A AP ++F DE DSI R +G
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 795 TD----RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHE 850
D R + + L +LDG E + V AT+R D+LD ALLRPGR+DR + P+
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 851 RLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R +IL + SRK+ + IDL +A G SG
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASG 369
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 377 ERAPEDPVSSNVSSLDWMEKTASDVINRMLVLLSSASGLWFGSYNLPLPGHVLIYGPPGS 436
E+ P D + LD K +VI L F S + P VL+YGPPG+
Sbjct: 153 EKVP-DSTYDMIGGLDQQIKEIKEVIE-----LPIKHPELFESLGIAQPKGVLLYGPPGT 206
Query: 437 GKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEAINHAPSIVIF 496
GKT+LAR +A +H D I VS S+L + + + + A HAPSI+
Sbjct: 207 GKTLLARAVA----HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 497 DDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF---GPIAFLAXXXXX 553
D++DSI S GS S + +++++++ GF I L
Sbjct: 261 DEIDSIGSARMESGSGNGDS--EVQRTMLELLNQLD-------GFEASNKIKVLMATNRI 311
Query: 554 XXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLLDVAVKCDGYDGY 613
GR D I P P R +LK ++ +L D L +A K +G G
Sbjct: 312 DILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGID-LKKIAEKMNGASGA 370
Query: 614 DLE---------ILVDRTVHAAVCRFLPANATIYEHE 641
+L+ L +R VH F A A + + +
Sbjct: 371 ELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKD 407
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
++DV G+ + + +E++E K P+ F+ ++ VLL GPPG GKT + A A +
Sbjct: 223 FEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEA 281
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F S+ G E + ++G RD+F+KA A +PC++F DE D++ RG G D
Sbjct: 282 GVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGND 341
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+ +NQ LTE+DG TGV V AAT+RP++LD+ALLRPGR DR + P R E
Sbjct: 342 EREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREE 401
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL V SR + D+ L +A T GFSG
Sbjct: 402 ILKVHSRSKKLDKDVSLSVIAMRTPGFSG 430
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 417 FGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEK--VPI 474
F + +P VL+ GPPG+GKT+LA+ +A A + F S S + V +
Sbjct: 249 FSALGAKIPKGVLLTGPPGTGKTLLAKAIAGE--------AGVPFFSLSGSEFIEMFVGV 300
Query: 475 IRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEK 534
+ N+A ++P IV D++D++ G T + G +D +++ +
Sbjct: 301 GASRARDLFNKAKANSPCIVFIDEIDAV-------GRMRGTGIGGGNDEREQTLNQILTE 353
Query: 535 RQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQ 594
G + +A GRFD + + P R+ +LK + R +
Sbjct: 354 MDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILK--VHSRSKK 411
Query: 595 CDDDVLLDV-AVKCDGYDGYDLEILVD 620
D DV L V A++ G+ G DL L++
Sbjct: 412 LDKDVSLSVIAMRTPGFSGADLANLMN 438
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ DV G + ++E+++ K P + ++ LL GPPG GKT + A A +
Sbjct: 261 FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEA 319
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F S E + ++G VRD+F KA + APC++F DE D++ +RG G D
Sbjct: 320 GVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGND 379
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+ +NQ LTE+DG +GV V AAT+RPD+LD+ALLRPGR DR + D P R++
Sbjct: 380 EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVK 439
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVDASRPLKTP 913
IL V SR + D+D VA T GF+G L +
Sbjct: 440 ILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE----- 494
Query: 914 VITDALLKLTAS-KARPSVSEEEKRRLYSIYHQ 945
I+DAL ++ A + + +V EEK+RL + YH+
Sbjct: 495 -ISDALERIIAGPEKKNAVVSEEKKRLVA-YHE 525
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 424 LPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSC--SKLALEKVPIIRQEIAN 481
+P L+ GPPG+GKT+LAR +A A + F SC S+ V + + +
Sbjct: 294 IPKGCLLVGPPGTGKTLLARAVAGE--------AGVPFFSCAASEFVELFVGVGASRVRD 345
Query: 482 HINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF 541
+A + AP IV D++D++ G Q + G +D +++ + G
Sbjct: 346 LFEKAKSKAPCIVFIDEIDAV-------GRQRGAGMGGGNDEREQTINQLLTEMDGFSGN 398
Query: 542 GPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLL 601
+ LA GRFD + + P + R +L ++ R DV
Sbjct: 399 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL--QVHSRGKALGKDVDF 456
Query: 602 D-VAVKCDGYDGYDLEILVDRTVHAAVCRFL 631
D VA + G+ G DL+ L++ A R L
Sbjct: 457 DKVARRTPGFTGADLQNLMNEAAILAARREL 487
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 28/304 (9%)
Query: 649 DFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQNAIKEMIEL---PSKFPKTFA 705
DF ++ F V +T + DV G + ++E+++ P K+ A
Sbjct: 231 DFGRSKSKFQEVPETGVT----------FGDVAGADQAKLELQEVVDFLKNPDKYTALGA 280
Query: 706 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFS 765
+ P LL GPPG GKT + A A + + F S E + ++G VRD+F
Sbjct: 281 KIP----KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFE 336
Query: 766 KATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEILTGVFVFAATS 822
KA + APC++F DE D++ +RG G D + +NQ LTE+DG +GV V AAT+
Sbjct: 337 KAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATN 396
Query: 823 RPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
RPD+LD+ALLRPGR DR + D P R++IL V SR + D+D VA T GF+G
Sbjct: 397 RPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTG 456
Query: 883 XXXXXXXXXXXXXXVHDILDNVDASRPLKTPVITDALLKLTAS-KARPSVSEEEKRRLYS 941
L + I+DAL ++ A + + +V EEK+RL +
Sbjct: 457 ADLQNLMNEAAILAARRELKEISKDE------ISDALERIIAGPEKKNAVVSEEKKRLVA 510
Query: 942 IYHQ 945
YH+
Sbjct: 511 -YHE 513
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 18/210 (8%)
Query: 424 LPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSC--SKLALEKVPIIRQEIAN 481
+P L+ GPPG+GKT+LAR +A A + F SC S+ V + + +
Sbjct: 282 IPKGCLLVGPPGTGKTLLARAVAGE--------AGVPFFSCAASEFVELFVGVGASRVRD 333
Query: 482 HINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF 541
+A + AP IV D++D++ G Q + G +D +++ + G
Sbjct: 334 LFEKAKSKAPCIVFIDEIDAV-------GRQRGAGMGGGNDEREQTINQLLTEMDGFSGN 386
Query: 542 GPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLL 601
+ LA GRFD + + P + R +LK + + + D D
Sbjct: 387 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVD-YE 445
Query: 602 DVAVKCDGYDGYDLEILVDRTVHAAVCRFL 631
VA + G+ G DL+ L++ A R L
Sbjct: 446 KVARRTPGFTGADLQNLMNEAAILAARREL 475
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 153 bits (386), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 671 DDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVG 730
D G + VGGL D ++E IELP P+ F + ++ VLLYGPPG GKT +
Sbjct: 132 DPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 191
Query: 731 AAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHD 790
A A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R +
Sbjct: 192 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSE 251
Query: 791 NTGV---TDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 847
T R + + L +LDG + L V + AT+RPD+LD ALLRPGRLDR + P+
Sbjct: 252 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 311
Query: 848 WHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R+EIL + + + +ID + + EGF+G
Sbjct: 312 EQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNG 346
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 26/251 (10%)
Query: 368 DPVSINSVEERAPEDPVSSNVSSLDWMEKTASDVINRMLVLLSSASGLWFGSYNLPLPGH 427
DPV N + E DP + + S++ + ++ R + L + F + P
Sbjct: 122 DPVVYNMLHE----DPGNISYSAVGGLGDQIREL--RESIELPLMNPELFLRVGIKPPKG 175
Query: 428 VLIYGPPGSGKTILARTLAKSLE-NHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEA 486
VL+YGPPG+GKT+LAR +A +++ N +++ I K E +IR+ N A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII---DKYIGESARLIRE----MFNYA 228
Query: 487 INHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGFGPIAF 546
H P I+ D++D+I SEG+ + L++ +D + + G +
Sbjct: 229 REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQ-------LGKVKM 281
Query: 547 LAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQ--RRHLQCDDDVLLDVA 604
+ GR D I +P P R +LK +H + D + ++ +
Sbjct: 282 IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLG 341
Query: 605 VKCDGYDGYDL 615
+G++G DL
Sbjct: 342 ---EGFNGADL 349
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 671 DDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVG 730
D G + VGGL D ++E IELP P+ F + ++ VLLYGPPG GKT +
Sbjct: 132 DPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 191
Query: 731 AAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHD 790
A A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R +
Sbjct: 192 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSE 251
Query: 791 NTGV---TDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 847
T R + + L +LDG + L V + AT+RPD+LD ALLRPGRLDR + P+
Sbjct: 252 GTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 311
Query: 848 WHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R++IL + + + +ID + + EGF+G
Sbjct: 312 EQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNG 346
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 26/251 (10%)
Query: 368 DPVSINSVEERAPEDPVSSNVSSLDWMEKTASDVINRMLVLLSSASGLWFGSYNLPLPGH 427
DPV N + E DP + + S++ + ++ R + L + F + P
Sbjct: 122 DPVVYNMLHE----DPGNISYSAVGGLGDQIREL--RESIELPLMNPELFLRVGIKPPKG 175
Query: 428 VLIYGPPGSGKTILARTLAKSLE-NHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEA 486
VL+YGPPG+GKT+LAR +A +++ N +++ I K E +IR+ N A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII---DKYIGESARLIRE----MFNYA 228
Query: 487 INHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGFGPIAF 546
H P I+ D++D+I SEG+ + L++ +D + G +
Sbjct: 229 REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD-------NLGKVKM 281
Query: 547 LAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQ--RRHLQCDDDVLLDVA 604
+ GR D I +P P R +LK +H + D + ++ +A
Sbjct: 282 IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLA 341
Query: 605 VKCDGYDGYDL 615
+G++G DL
Sbjct: 342 ---EGFNGADL 349
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 131/250 (52%), Gaps = 8/250 (3%)
Query: 641 ENPALLREDFSQAMHDFLPVAMRDITKSASDDGRS--GWDDVGGLVDIQNAIKEMIELPS 698
E+ L+ + + D L VA I S S+ G++ GWD V GL + +KE++ +P
Sbjct: 680 EDEEFLKRESKRLHRDLLRVAPEYIGGSDSESGKAFEGWDSVAGLEGVTQCMKEVVLIPL 739
Query: 699 KFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGA-----AAAASSLRFISVKGPELLNKYI 753
+P+ F L +LL+G PG GKT +V A A + + + KG + L KY+
Sbjct: 740 LYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYV 799
Query: 754 GASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILT 813
G +E+ +R +F A P ++FFDE D +APKR VV+ L LDG++
Sbjct: 800 GDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKSRG 859
Query: 814 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPM-ASDIDLGT 872
V V AT+ PD +D AL RPGR DR ++ PS +R I+++ +RK P S L
Sbjct: 860 SVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKW 919
Query: 873 VANMTEGFSG 882
+A T GF+G
Sbjct: 920 IAKETAGFAG 929
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 11/226 (4%)
Query: 416 WFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPII 475
+F + L P +L++G PG+GKT++ R L SL +A+ L + V
Sbjct: 744 FFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLG-KYVGDA 802
Query: 476 RQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKR 535
+++ A PSI+ FD++D + + Q +SV L+D + G
Sbjct: 803 ERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKSRGS-- 860
Query: 536 QKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQC 595
+ + GRFD I P P+ +R A++ ++
Sbjct: 861 --------VVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPV 912
Query: 596 DDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYEHE 641
+L +A + G+ G D++ L + A+ R P ++ E
Sbjct: 913 SGYLLKWIAKETAGFAGADIQALCTQAAMIALNRSFPLQESLAAAE 958
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 122/232 (52%), Gaps = 27/232 (11%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
++DV G+ + + +E++E K P+ F+ ++ VLL GPPG GKT + A A +
Sbjct: 221 FEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEA 279
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F S+ G E + ++G RD+F+KA A +PC++F DE D++ RG G D
Sbjct: 280 GVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGND 339
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDR-------------- 839
+ +NQ LTE+DG TGV V AAT+RP++LD+ALLRPGR DR
Sbjct: 340 EREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVCWLILKPNKSNR 399
Query: 840 ---LLFC------DFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+ C P R EIL V SR + D+ L +A T GFSG
Sbjct: 400 FGIMSTCFKQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSG 451
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 143 bits (361), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 11/213 (5%)
Query: 677 WDDVGGLVDIQNAIKEMIE---LPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 733
++D+GGL + I+E++E LP + F + +R VLLYGPPG GKT + A A
Sbjct: 170 YNDIGGL---EKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACA 226
Query: 734 AASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 793
A ++ F+ + GP+L+ +IG + VRD F A APC++F DE D+I KR D+
Sbjct: 227 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKR-FDSEV 285
Query: 794 VTDRVVN----QFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWH 849
DR V + L +LDG + V AAT+R D+LD AL+R GRLDR + P+
Sbjct: 286 SGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 345
Query: 850 ERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R IL + SRK+ + D++ +A T+ F+G
Sbjct: 346 ARARILQIHSRKMNVHPDVNFEELARSTDDFNG 378
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+GG + I+E++ELP P+ F + + VL YGPPG GKT + A A +
Sbjct: 360 YSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRT 419
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
FI V G EL+ KYIG + VR++F A + C+LFFDE D+I R D G +
Sbjct: 420 GACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDN 479
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLL-FCDFPSWHERL 852
R + + L +LDG + + V AT+RPD+LD ALLRPGRLDR + FC P R
Sbjct: 480 EVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFC-LPDLEGRT 538
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+I + +R + DI +A + +G
Sbjct: 539 QIFKIHTRTMSCERDIRFELLAGLCPNSTG 568
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+GG + I+E++ELP P+ F + + VL YGPPG GKT + A A +
Sbjct: 338 YSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRT 397
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
FI V G EL+ KYIG + VR++F A + C+LFFDE D+I R D G +
Sbjct: 398 GACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDN 457
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLL-FCDFPSWHERL 852
R + + L +LDG + + V AT+RPD+LD ALLRPGRLDR + FC P R
Sbjct: 458 EVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFC-LPDLEGRT 516
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+I + +R + DI +A + +G
Sbjct: 517 QIFKIHTRTMSCERDIRFELLAGLCPNSTG 546
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+GG + I+E++ELP P+ F + + VL YGPPG GKT + A A +
Sbjct: 339 YSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRT 398
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
FI V G EL+ KYIG + VR++F A + C+LFFDE D+I R D G +
Sbjct: 399 GACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDN 458
Query: 797 ---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLL-FCDFPSWHERL 852
R + + L +LDG + + V AT+RPD+LD ALLRPGRLDR + FC P R
Sbjct: 459 EVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFC-LPDLEGRT 517
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+I + +R + DI +A + +G
Sbjct: 518 QIFKIHTRTMSCERDIRFELLAGLCPNSTG 547
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 124/213 (58%), Gaps = 13/213 (6%)
Query: 679 DVGGLVDIQNAIKEMIEL---PSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 735
DV G+ + + ++E++E P K+ + A+ P VLL G PG GKT + A A
Sbjct: 326 DVAGVDEAKEELEEIVEFLRNPEKYVRLGARPP----RGVLLVGLPGTGKTLLAKAVAGE 381
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKR-GHDNTGV 794
+ + FIS E + Y+G VRD+F++A AP ++F DE D++A R G G
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGS 441
Query: 795 TD---RVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHER 851
D + +NQ LTE+DG + + V V AT+R D+LD AL RPGR DR++ + P R
Sbjct: 442 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGR 501
Query: 852 LEILTV-LSRK-LPMASDIDLGTVANMTEGFSG 882
IL V +S+K LP+ D++LG++A+MT GF+G
Sbjct: 502 ESILRVHVSKKELPLGDDVNLGSIASMTTGFTG 534
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 11/213 (5%)
Query: 677 WDDVGGLVDIQNAIKEMIE---LPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 733
++D+GGL + I+E++E LP + F + +R VLLYGPPG GKT + A A
Sbjct: 169 YNDIGGL---EKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACA 225
Query: 734 AASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 793
A ++ F+ + GP+L+ +IG + VRD F A +PC++F DE D+I KR D+
Sbjct: 226 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKR-FDSEV 284
Query: 794 VTDRVVN----QFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWH 849
DR V + L +LDG + V AAT+R D+LD AL+R GRLDR + P+
Sbjct: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
Query: 850 ERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R IL + SRK+ + +D++ +A T+ F+G
Sbjct: 345 ARGRILQIHSRKMNVNADVNFEELARSTDDFNG 377
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 679 DVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSL 738
DV GL I+ ++E+++ + + + + +++ +LL GPPG GKT + A A + +
Sbjct: 411 DVAGLGKIRLELEEIVKFFT-HGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGV 469
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDR 797
F S+ + + Y+G VR ++ +A AP ++F DE D++ +RG +G +R
Sbjct: 470 NFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQER 529
Query: 798 --VVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+NQ L LDG E V A+T+RPD+LD AL+RPGR DR +F P R+EIL
Sbjct: 530 DATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEIL 589
Query: 856 TVLSRKLPMASDIDLGTVANMTEGFSG 882
V +RK PMA D+D VA+MT+G G
Sbjct: 590 QVHARKKPMAEDLDYMAVASMTDGMVG 616
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 414 GLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVP 473
G + + +PG +L+ GPPG GKT+LA+ +A + + +S S+ V
Sbjct: 432 GEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVA------GEAGVNFFSISASQFVEIYVG 485
Query: 474 IIRQEIANHINEAINHAPSIVIFDDLDSIVSTHD-SEGSQPSTSVAGLSDFLVDIMDEYG 532
+ + EA +APS+V D+LD++ +GS A L+ LV +D +
Sbjct: 486 VGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVS-LDGFE 544
Query: 533 EKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRH 592
G G + +A GRFD I +P P R +L+ +++
Sbjct: 545 -------GRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKP 597
Query: 593 LQCDDDVLLDVAVKCDGYDGYDLEILVD 620
+ D D + VA DG G +L +V+
Sbjct: 598 MAEDLDYMA-VASMTDGMVGAELANIVE 624
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 114/213 (53%), Gaps = 1/213 (0%)
Query: 670 SDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIV 729
S D + + DV G+ + + ++E++ + PK F + +L VLL GPPG GKT +
Sbjct: 219 SMDSSTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLA 277
Query: 730 GAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH 789
A A + + F S G E ++G + VRD+FS A +PC++F DE D+I R
Sbjct: 278 RAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNP 337
Query: 790 DNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWH 849
+ +NQ L ELDG + G+ V AAT+ P+ LD AL+RPGR DR + P
Sbjct: 338 KDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVE 397
Query: 850 ERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
R +IL K+ A D+DL +A T GFSG
Sbjct: 398 GRRQILESHMSKVLKAEDVDLMIIARGTPGFSG 430
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 424 LPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEK--VPIIRQEIAN 481
LP VL+ GPPG+GKT+LAR +A A + F SCS E+ V + + + +
Sbjct: 259 LPKGVLLVGPPGTGKTMLARAIAGE--------AGVPFFSCSGSEFEEMFVGVGARRVRD 310
Query: 482 HINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGF 541
+ A +P I+ D++D+I + + + Q L+ LV++ G K+ +
Sbjct: 311 LFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMT--LNQMLVEL---DGFKQNEG--- 362
Query: 542 GPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLL 601
I +A GRFD HI +P P R+ +L+ + + L+ +D L+
Sbjct: 363 --IIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMS-KVLKAEDVDLM 419
Query: 602 DVAVKCDGYDGYDLEILVD 620
+A G+ G DL LV+
Sbjct: 420 IIARGTPGFSGADLANLVN 438
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Query: 668 SASDDGRSGWDDVGGLVDIQ-NAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKT 726
S S+ ++D+GG DIQ I+E +ELP + + Q + VLLYGPPG GKT
Sbjct: 145 SQSEKPDVSYNDIGG-CDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKT 203
Query: 727 HIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPK 786
+ A A ++ FI V G E + KY+G + VRDVF A AP ++F DE D+IA
Sbjct: 204 MLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATA 263
Query: 787 RGHDNTGV---TDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFC 843
R TG R++ + L ++DG + V V AT+R D LD ALLRPGRLDR +
Sbjct: 264 RFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEF 323
Query: 844 DFPSWHERLEILTVLSRKLPMASDIDL 870
P ++ + V + K+ ++ ++DL
Sbjct: 324 PLPDRRQKRLVFQVCTSKMNLSDEVDL 350
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 7/210 (3%)
Query: 679 DVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSL 738
DV G+ + + ++E++E K P + + R VLL G PG GKT + A A S +
Sbjct: 330 DVAGVDEAKEELEEIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDV 388
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT--- 795
FIS E + Y+G VRD+F++A AP ++F DE D++A R V+
Sbjct: 389 PFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDE 448
Query: 796 -DRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEI 854
++ +NQ LTE+DG + + V V AT+R D+LD AL RPGR DR++ + P R I
Sbjct: 449 REQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESI 508
Query: 855 LTV-LSRK-LPMASDIDLGTVANMTEGFSG 882
L V +S+K LP+ D++L ++A+MT GF+G
Sbjct: 509 LKVHVSKKELPLGDDVNLASIASMTTGFTG 538
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
++DVGG + ++E++ELP P+ F + + VL YGPPG GKT + A A +
Sbjct: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRT 226
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG--- 793
FI V G EL+ KY+G + VR++F A + C++FFDE D+I R D G
Sbjct: 227 DACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286
Query: 794 VTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
R + + + +LDG + + V AT+RPD LD ALLRPGRLDR + P R +
Sbjct: 287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQ 346
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
I + +R + DI +A + +G
Sbjct: 347 IFKIHTRTMNCERDIRFELLARLCPNSTG 375
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 8/209 (3%)
Query: 677 WDDVGGLVDIQNAIKEMIEL---PSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 733
+ DV G D + ++E++E PSKF + + P +LL G PG GKT + A A
Sbjct: 361 FKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLP----KGILLTGAPGTGKTLLAKAIA 416
Query: 734 AASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 793
+ + F G E ++G + VR +F A APC++F DE D++ R G
Sbjct: 417 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE-G 475
Query: 794 VTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
T + ++Q L E+DG E G+ V AAT+ PD+LD AL RPGR DR + P R E
Sbjct: 476 HTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREE 535
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL + + PM+ D+D+ +A T GF+G
Sbjct: 536 ILELYLQGKPMSEDVDVKAIARGTPGFNG 564
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 424 LPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEK--VPIIRQEIAN 481
LP +L+ G PG+GKT+LA+ +A A + F + E+ V + + + +
Sbjct: 394 LPKGILLTGAPGTGKTLLAKAIAGE--------AGVPFFYRAGSEFEEMFVGVGARRVRS 445
Query: 482 HINEAINHAPSIVIFDDLDSIVSTHDS-EGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCG 540
A AP I+ D++D++ ST EG T L LV+ MD + +
Sbjct: 446 LFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKT----LHQLLVE-MDGFEQNEG---- 496
Query: 541 FGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVL 600
I +A GRFD HI +P+P R+ +L+ +Q + + D DV
Sbjct: 497 ---IIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVK 553
Query: 601 LDVAVKCDGYDGYDLEILVD-RTVHAAV 627
+A G++G DL LV+ + AAV
Sbjct: 554 A-IARGTPGFNGADLANLVNIAAIKAAV 580
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE LENGTH=622
Length = 622
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 667 KSASDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL--RLRSNVLLYGPPGCG 724
K S + G+DDV G + +A E++E+ S + L RL VLL GPPG G
Sbjct: 323 KRRSKNPTVGFDDVEG---VDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTG 379
Query: 725 KTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIA 784
KT + A A + + F SV E + ++G +RD+F+ A +P ++F DE D++
Sbjct: 380 KTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVG 439
Query: 785 PKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCD 844
KRG D+ +NQ LTE+DG E T V V AAT+RP+ LD+AL RPGR R +
Sbjct: 440 GKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVA 499
Query: 845 FPSWHERLEILTVLSRKLPMASDIDL--GTVANMTEGFSG 882
P R +IL + R +P+ D L VA++T GF G
Sbjct: 500 EPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVG 539
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 11/219 (5%)
Query: 670 SDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHI 728
SD G S + D+G L ++++ +KE++ LP + P+ F + L + +LL+GPPG GKT +
Sbjct: 937 SDIGVS-FSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTML 995
Query: 729 VGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRG 788
A A + FI++ + +K+ G E+ V+ VFS A+ AP ++F DE DS+ +R
Sbjct: 996 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR- 1054
Query: 789 HDNTG---VTDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFC 843
+N G ++ N+F+ DG+ V V AAT+RP LD A++R RL R L
Sbjct: 1055 -ENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1111
Query: 844 DFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+ P R +IL+V+ K MA D+DL +ANMT+G+SG
Sbjct: 1112 NLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSG 1150
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 11/219 (5%)
Query: 670 SDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHI 728
SD G S +DD+G L +++ +KE++ LP + P+ F + L + +LL+GPPG GKT +
Sbjct: 956 SDIGVS-FDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTML 1014
Query: 729 VGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRG 788
A A + FI++ + +K+ G E+ V+ VFS A+ AP ++F DE DS+ +R
Sbjct: 1015 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR- 1073
Query: 789 HDNTG---VTDRVVNQFLTELDGVEI--LTGVFVFAATSRPDLLDAALLRPGRLDRLLFC 843
+N G ++ N+F+ DG+ V V AAT+RP LD A++R RL R L
Sbjct: 1074 -ENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1130
Query: 844 DFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+ P R +IL+V+ K +A D+DL +ANMT+G+SG
Sbjct: 1131 NLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSG 1169
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHIVGAAAAA 735
++D+G L D++ A+ E++ LP + P+ FA+ L R +LL+GPPG GKT + A A
Sbjct: 713 FEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATE 772
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNT-GV 794
+ FIS+ G L +K+ G +E+ + +FS AT AP ++F DE DS+ RG +
Sbjct: 773 AGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEA 832
Query: 795 TDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
T R+ N+F+ DG+ + + AT+RP LD A++R RL R ++ D P RL
Sbjct: 833 TRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRL 890
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+IL + + SD +A TEG+SG
Sbjct: 891 KILKIFLTPENLESDFQFEKLAKETEGYSG 920
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHIVGAAAAA 735
++D+G L D++ A+ E++ LP + P+ FA+ L R +LL+GPPG GKT + A A
Sbjct: 691 FEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATE 750
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNT-GV 794
+ FIS+ G L +K+ G +E+ + +FS AT AP ++F DE DS+ RG +
Sbjct: 751 AGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEA 810
Query: 795 TDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
T R+ N+F+ DG+ + + AT+RP LD A++R RL R ++ D P RL
Sbjct: 811 TRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRL 868
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+IL + + SD +A TEG+SG
Sbjct: 869 KILKIFLTPENLESDFQFEKLAKETEGYSG 898
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+GGL IKE +ELP P+ + ++ V+LYG PG GKT + A A ++
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG--- 793
S F+ V G EL+ KY+G + VR++F A +P ++F DE D++ KR N+G
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 794 VTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
R + + L +LDG + V V AT+R + LD ALLRPGR+DR + P R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
I + + K+ +A D++L + FSG
Sbjct: 367 IFQIHTSKMTLAEDVNLEEFVMTKDEFSG 395
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 124/236 (52%), Gaps = 14/236 (5%)
Query: 660 VAMRDITKSASDDGRSG--WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLL 717
+A A DG +G + DV G+ + + ++E+++ K P F + ++ VLL
Sbjct: 410 IAFSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLL 468
Query: 718 YGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFF 777
GPPGCGKT + A A + + F + G E + +G +RD+F +A P ++F
Sbjct: 469 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 528
Query: 778 DEFDSIAPKR------GHD---NTGVTDR--VVNQFLTELDGVEILTGVFVFAATSRPDL 826
DE D++A +R D N +R +NQ L ELDG + GV AT+R DL
Sbjct: 529 DEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDL 588
Query: 827 LDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
LD ALLRPGR DR + P+ RL+IL + + K+ M+ +DL + A+ G+SG
Sbjct: 589 LDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSG 644
>AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 |
chr1:2305689-2309380 FORWARD LENGTH=813
Length = 813
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 7/212 (3%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ DV G + + I E + PK + ++ LL GPPG GKT + A A S
Sbjct: 326 FKDVAGCEEAKQEIMEFVHFLQN-PKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 384
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDN-TGVT 795
++ F+S+ G + + ++G VR++F +A AP ++F DE D+I RG +G
Sbjct: 385 AVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGN 444
Query: 796 DR---VVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
D +NQ L E+DG GV V A T+RPD+LD ALLRPGR DR + D P R
Sbjct: 445 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 504
Query: 853 EILTVLSRKLPMASDIDLGT--VANMTEGFSG 882
+I + +K+ + + + +A +T GF+G
Sbjct: 505 QIFQIYLKKIKLDHEPSYYSQRLAALTPGFAG 536
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 5/190 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+DD+GGL + N +KEM+ P +P+ FA + VLL GPPG GKT I A A A+
Sbjct: 380 FDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAA 439
Query: 737 S-----LRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDN 791
S + F KG ++L+K++G +E+ ++ +F +A P ++FFDE D +AP R
Sbjct: 440 SKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQ 499
Query: 792 TGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHER 851
+ + +V+ L +DG++ V + AT+R D +D AL RPGR DR P R
Sbjct: 500 EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEAR 559
Query: 852 LEILTVLSRK 861
EIL + +RK
Sbjct: 560 AEILDIHTRK 569
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 22/256 (8%)
Query: 416 WFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPII 475
+F SY++ P VL+ GPPG+GKT++AR LA + ++ + L+ + V
Sbjct: 406 FFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLS-KWVGEA 464
Query: 476 RQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKR 535
+++ EA + PSI+ FD++D + S+ Q S+ L+D +D G+
Sbjct: 465 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQ-- 522
Query: 536 QKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQC 595
+ + GRFD P R +L ++
Sbjct: 523 --------VVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPP 574
Query: 596 DDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANATIYEHENPALL--------R 647
++ ++A C GY G DL+ L AA+ F +Y ++ + +
Sbjct: 575 TRELKEELAATCVGYCGADLKALC---TEAAIRAFREKYPQVYTSDDKYAIDVGLVNVEK 631
Query: 648 EDFSQAMHDFLPVAMR 663
F +AM P A R
Sbjct: 632 SHFVEAMSAITPAAHR 647
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 126/236 (53%), Gaps = 6/236 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHIVGAAAAA 735
+DD+G L +++ +KE++ LP + P+ F + L + +LL+GPPG GKT + A A
Sbjct: 819 FDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKE 878
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 795
+ FI++ + +K+ G E+ V+ VFS A+ +P ++F DE DS+ +R H
Sbjct: 879 ADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEA 938
Query: 796 DR-VVNQFLTELDGV--EILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
R + N+F+ DG+ + V V AAT+RP LD A++R RL R L P R
Sbjct: 939 SRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRA 996
Query: 853 EILTVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVDASR 908
IL V+ K ++ D+D+G +A+MT G+SG + +IL+ R
Sbjct: 997 FILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILEKEKRER 1052
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+GGL IKE +ELP P+ + ++ V+LYG PG GKT + A A ++
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG--- 793
S F+ V G EL+ KY+G + VR++F A +P ++F DE D++ KR ++G
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 794 VTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
R + + L +LDG + V V AT+R + LD ALLRPGR+DR + P R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
I + + K+ ++ D++L + FSG
Sbjct: 367 IFQIHTSKMTLSEDVNLEEFVMTKDEFSG 395
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 18/268 (6%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHIVGAAAAA 735
+DD+G L ++ + E++ LP + P+ F + L R +LL+GPPG GKT + A A
Sbjct: 703 FDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATE 762
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRG----HDN 791
+ FIS+ G L +K+ G +E+ + +FS A+ AP ++F DE DS+ RG H+
Sbjct: 763 AGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHE- 821
Query: 792 TGVTDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWH 849
T R+ N+F+ DG+ + + AT+RP LD A++R RL R ++ D P
Sbjct: 822 --ATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAE 877
Query: 850 ERLEILTVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDIL-----DNV 904
RL+IL + + + + +A TEG+SG V ++L D+V
Sbjct: 878 NRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEENKDSV 937
Query: 905 DASRPLKTPVITDALLKLTASKARPSVS 932
+ P P+ D ++ + +K PSV+
Sbjct: 938 TNASPDLRPLSLDDFIQ-SKAKVSPSVA 964
>AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 |
chr2:12489911-12492999 REVERSE LENGTH=809
Length = 809
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 6/211 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ DV G + + I E + K PK + ++ LL GPPG GKT + A A S
Sbjct: 321 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 379
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 796
+ F+S+ G + + ++G VR +F +A AAP ++F DE D+I RG G D
Sbjct: 380 GVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGND 439
Query: 797 R---VVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+NQ L E+DG GV V A T+RPD+LD ALLRPGR DR + D P R +
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 499
Query: 854 ILTVLSRKLPMASDIDLGT--VANMTEGFSG 882
I + +K+ + + + +A +T GF+G
Sbjct: 500 IFKIYLKKIKLDHEPSYYSQRLAALTPGFAG 530
>AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein |
chr4:2489696-2495666 REVERSE LENGTH=742
Length = 742
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 19/199 (9%)
Query: 701 PKTFAQAPLRLRSNVLLYGPPGCGKTHI---VGAAAAASSLRFISVKGPELLNKYIGASE 757
P ++ ++ +LL+GPPG GKT + +G + V GPE+L+K++G +E
Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKI--VNGPEVLSKFVGETE 296
Query: 758 QAVRDVFSKAT--------AAAPCLLFFDEFDSIAPKRG--HDNTGVTDRVVNQFLTELD 807
+ VRD+F+ A A+ ++ FDE D+I RG D TGV D +VNQ LT++D
Sbjct: 297 KNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 356
Query: 808 GVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLP---- 863
GVE L V + T+R DLLD ALLRPGRL+ + P RL+IL + + K+
Sbjct: 357 GVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSF 416
Query: 864 MASDIDLGTVANMTEGFSG 882
+ +DI+L +A T+ +SG
Sbjct: 417 LGTDINLQELAARTKNYSG 435
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 149/385 (38%), Gaps = 52/385 (13%)
Query: 428 VLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPIIRQEIAN--HINE 485
+L++GPPG+GKT++AR + K L N KD SK E +R A+
Sbjct: 253 MLLFGPPGTGKTLMARQIGKML-NGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQR 311
Query: 486 AINHAPS--IVIFDDLDSIV----STHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSC 539
+ A ++IFD++D+I ST D G S I+++ K
Sbjct: 312 TLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDS------------IVNQLLTKIDGVE 359
Query: 540 GFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLK---HEIQRRHLQCD 596
+ + GR + + + P + R +L+ ++++
Sbjct: 360 ALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGT 419
Query: 597 DDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPAN--ATIYEHENPALLREDFSQAM 654
D L ++A + Y G +LE +V A+ R L + E EN + EDF A+
Sbjct: 420 DINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFLHAI 479
Query: 655 HDFLPVAMRDITKSASDDGRSGWDDVGGLVDI---QNAIKEMIELPSKFPKTFAQAPLRL 711
++ P S D R + G+VD N I + L + K ++PL
Sbjct: 480 YEVQPA----FGASTDDLERCRLN---GMVDCGHRHNHIYKRAMLLVEQVKVSTRSPL-- 530
Query: 712 RSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQA----VRDVFSKA 767
LL GP G GKT + S ++ + E + IG SE + VF A
Sbjct: 531 -VTCLLEGPSGSGKTALAATIGIDSDFPYVKIVSAETM---IGLSESTKCAHIVKVFEDA 586
Query: 768 TAAAPCLLFFD------EFDSIAPK 786
+ ++ D EF +I P+
Sbjct: 587 YKSPMSIIILDDIERLLEFIAIGPR 611
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+G L +I+ +++E++ LP + P F L+ +LL+GPPG GKT + A A +
Sbjct: 520 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEA 579
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVT 795
FI+V + +K+ G E+ VR +F+ A+ +P ++F DE DS+ +R
Sbjct: 580 GASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAM 639
Query: 796 DRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
++ N+F++ DG+ G + V AAT+RP LD A++R R +R + P+ R +
Sbjct: 640 RKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREK 697
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL L K + ++D +A MTEG++G
Sbjct: 698 ILRTLLAKEKVDENLDYKELAMMTEGYTG 726
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+G L +I+ +++E++ LP + P F L+ +LL+GPPG GKT + A A +
Sbjct: 518 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEA 577
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVT 795
FI+V + +K+ G E+ VR +F+ A+ +P ++F DE DS+ +R
Sbjct: 578 GASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAM 637
Query: 796 DRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
++ N+F++ DG+ G + V AAT+RP LD A++R R +R + P+ R +
Sbjct: 638 RKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREK 695
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL L K + ++D +A MTEG++G
Sbjct: 696 ILRTLLAKEKVDENLDYKELAMMTEGYTG 724
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
+ D+G L +I+ +++E++ LP + P F L+ +LL+GPPG GKT + A A +
Sbjct: 515 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEA 574
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVT 795
FI+V + +K+ G E+ VR +F+ A+ +P ++F DE DS+ +R
Sbjct: 575 GASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAM 634
Query: 796 DRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
++ N+F++ DG+ G + V AAT+RP LD A++R R +R + P+ R +
Sbjct: 635 RKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREK 692
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL L K + ++D +A MTEG++G
Sbjct: 693 ILRTLLAKEKVDENLDYKELAMMTEGYTG 721
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 29/307 (9%)
Query: 680 VGGLVDIQNAIKEMIELPSKFPKTFAQAPLR-LRSNVLLYGPPGCGKTHIVGAAAAASSL 738
+GGL I+ A+ E++ LP K P+ FA L + VLLYGPPG GKT + A A S
Sbjct: 89 IGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEA 148
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDS-IAPKRGHDNTGVTDR 797
FI+VK L++K+ G +++ V VFS A P ++F DE DS + +R DN +++
Sbjct: 149 VFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMSN- 207
Query: 798 VVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+ +F+ DG V V AAT+RP LD A+LR R + P ER +IL
Sbjct: 208 MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQIL 265
Query: 856 TVLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILD------NVDASRP 909
V+ + + SDI+ +A + E ++G + +IL+ V RP
Sbjct: 266 KVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKRVSVPRP 325
Query: 910 L-------------KTPVITDALLKLTASKA---RPSVSEEEKRRLYSIYHQFLDSKRSV 953
L KT V L++ + PS ++E + + I F+ R++
Sbjct: 326 LTQLDLEKVLATSKKTQVAASEYTGLSSQSSVWGSPSNADEVQAAINGISKLFVSQLRNI 385
Query: 954 AAQSRDA 960
S+D+
Sbjct: 386 QPDSQDS 392
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 680 VGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHIVGAAAAASSL 738
+GGL I+ A+ E++ LP K P+ FA L + VLLYGPPG GKT + A A S
Sbjct: 86 IGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGA 145
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 798
FI+V+ L++K+ G +++ V VFS A P ++F DE +S +R + +
Sbjct: 146 VFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTDHEAMANM 205
Query: 799 VNQFLTELDG--VEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILT 856
+F+ DG + V V AAT+RP LD A+LR RL + P ER EIL
Sbjct: 206 KTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILK 263
Query: 857 VLSRKLPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILDNVDASRPLKTP 913
V + + DID +A + EG++G + +ILD +P P
Sbjct: 264 VTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREILDAERKGKPCLDP 320
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 18/218 (8%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
WDDV GL + + ++E + LP P+ F Q R VL++GPPG GKT + A A
Sbjct: 238 WDDVAGLSEAKRLLEEAVVLPLWMPEYF-QGIRRPWKGVLMFGPPGTGKTLLAKAVATEC 296
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRG----HDNT 792
F +V L +K+ G SE+ VR +F A A AP +F DE DS+ RG H++
Sbjct: 297 GTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHES- 355
Query: 793 GVTDRVVNQFLTELDGVEILTG--------VFVFAATSRPDLLDAALLRPGRLDRLLFCD 844
+ RV ++ L ++DGV V V AAT+ P +D AL R RL++ ++
Sbjct: 356 --SRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIP 411
Query: 845 FPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
P + R ++ + R + +ASD+++ VA TEG+SG
Sbjct: 412 LPDFESRKALININLRTVEVASDVNIEDVARRTEGYSG 449
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAS 736
W DV GL + A++E + LP KFP+ F R+ LLYGPPG GK+++ A A +
Sbjct: 131 WSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRA-FLLYGPPGTGKSYLAKAVATEA 189
Query: 737 SLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDN-TGVT 795
F SV +L++K++G SE+ V ++F A +AP ++F DE DS+ RG N + +
Sbjct: 190 DSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESEAS 249
Query: 796 DRVVNQFLTELDGV-EILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEI 854
R+ + L ++ GV V V AAT+ P LD A+ R R D+ ++ P R +
Sbjct: 250 RRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAKARQHM 307
Query: 855 LTVLSRKLPMA-SDIDLGTVANMTEGFSG 882
V P ++ D + TEGFSG
Sbjct: 308 FKVHLGDTPHNLTEPDFEYLGQKTEGFSG 336
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 16/191 (8%)
Query: 429 LIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEAIN 488
L+YGPPG+GK+ LA+ +A + + VS S L + + + ++N A
Sbjct: 169 LLYGPPGTGKSYLAKAVATEAD------STFFSVSSSDLVSKWMGESEKLVSNLFEMARE 222
Query: 489 HAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLVDIMDEYGEKRQKSCGFGPIAFLA 548
APSI+ D++DS+ T EG++ S ++ LV + + G L
Sbjct: 223 SAPSIIFVDEIDSLCGTR-GEGNESEASRRIKTELLVQM---------QGVGHNDEKVLV 272
Query: 549 XXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEIQRRHLQCDDDVLLDVAVKCD 608
RFD I +P P A R+ M K + + + K +
Sbjct: 273 LAATNTPYALDQAIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTE 332
Query: 609 GYDGYDLEILV 619
G+ G D+ + V
Sbjct: 333 GFSGSDVSVCV 343
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 679 DVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSL 738
D+G L + + +++E++ LP + P F L+ +LL+GPPG GKT + A A +
Sbjct: 519 DIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGA 578
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDR 797
FI+V + +K+ G E+ VR +F+ A +P ++F DE DS+ +R +
Sbjct: 579 SFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 638
Query: 798 VVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+ N+F+T DG+ G + V AAT+RP LD A++R R +R + PS R +IL
Sbjct: 639 IKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKIL 696
Query: 856 -TVLSRKLPMASDIDLGTVANMTEGFSG 882
T+LS++ ++D +A MT+G+SG
Sbjct: 697 RTLLSKE--KTENLDFQELAQMTDGYSG 722
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 679 DVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSL 738
D+G L + +++++E++ LP + P F L+ +LL+GPPG GKT + A A +
Sbjct: 518 DIGSLDETKDSLQELVMLPLRRPDLFQGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGA 577
Query: 739 RFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDR 797
FI+V + +K+ G E+ VR +F+ A +P ++F DE DS+ +R +
Sbjct: 578 SFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK 637
Query: 798 VVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+ N+F+T DG+ G + V AAT+RP LD A++R R +R + PS R +IL
Sbjct: 638 IKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPSIESREKIL 695
Query: 856 -TVLSRKLPMASDIDLGTVANMTEGFSG 882
T+LS++ ++D + +TEG+SG
Sbjct: 696 RTLLSKE--KTENLDFHELGQITEGYSG 721
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTF--AQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 734
WDD+ GL + + EM+ P P F ++P + +LL+GPPG GKT I A A
Sbjct: 198 WDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGK---GLLLFGPPGTGKTMIGKAIAG 254
Query: 735 ASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNT-G 793
+ F + L +K+IG E+ VR +F A+ P ++F DE DS+ +R D
Sbjct: 255 EAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHE 314
Query: 794 VTDRVVNQFLTELDGVEILT-GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
+ R+ QFL E++G + + + + AT+RP LD A R RL + L+ PS R
Sbjct: 315 SSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARA 372
Query: 853 EILTVLSRK--LPMASDIDLGTVANMTEGFSGXXXXXXXXXXXXXXVHDILD-NVDASRP 909
I+ L +K L SD D+ + N+TEG+SG + + L +D +
Sbjct: 373 WIIQNLLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNL 432
Query: 910 LKTPV--ITDALLKLTASKARPSVSEEEKRRLYSIYHQF 946
K + +T K + RPSVS+ E + +QF
Sbjct: 433 TKDDMRLVTLQDFKDALQEVRPSVSQNELGIYENWNNQF 471
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Query: 668 SASDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTH 727
SA + +DD G I+ ++E++ + K + F + VLL+GPPG GKT
Sbjct: 306 SAEEKTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTL 364
Query: 728 IVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKR 787
+ A A + L F + G + + ++G + V+D+F+ + + AP ++F DE D+I KR
Sbjct: 365 LAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKR 424
Query: 788 GHDNTGVT----DRVVNQFLTELDGVEILTG-VFVFAATSRPDLLDAALLRPGRLDRLLF 842
G + G ++ + Q LTE+DG ++ T V V AT+R D+LD ALLR GR D+++
Sbjct: 425 GGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIR 484
Query: 843 CDFPSWHERLEILTVLSRKLPMASDID----LGTVANMTEGFSG 882
PS RL IL V +R S+ + L VA TE F+G
Sbjct: 485 VGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTG 528
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 417 FGSYNLPLPGHVLIYGPPGSGKTILARTLAKS------LENHKDILAHIIFVSCSKLALE 470
F + + P VL++GPPG+GKT+LA+ +A N D + + V+ S+
Sbjct: 341 FQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASR---- 396
Query: 471 KVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTS--VAGLSDFLVDIM 528
+ + + ++APSI+ D++D+I S + GL L + M
Sbjct: 397 --------VKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTE-M 447
Query: 529 DEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLKHEI 588
D + + + GRFD IR+ P+ R A+LK
Sbjct: 448 DGF------KVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHA 501
Query: 589 QRRHLQCDD---DVLLDVAVKCDGYDGYDLE 616
+ + + +D ++L +VA + + G +L+
Sbjct: 502 RNKFFRSEDEKEELLQEVAENTEDFTGAELQ 532
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFA--QAPLRLRSNVLLYGPPGCGKTHIVGAAAA 734
WDDV GL + A+ EM+ LP+K F + P R +LL+GPPG GKT + A A+
Sbjct: 215 WDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPAR---GLLLFGPPGNGKTMLAKAVAS 271
Query: 735 ASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 794
S F +V L +K++G +E+ V+ +F A + P ++F DE DSI R
Sbjct: 272 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEA 331
Query: 795 TDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
+ R+ ++FL + DGV V + AT++P LD A+LR RL + ++ P + R
Sbjct: 332 SRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRK 389
Query: 853 EILTVLSRKLPMA-SDIDLGTVANMTEGFSG 882
+ + P + SD D+ + TEG+SG
Sbjct: 390 LLFKTKLKCQPHSLSDGDIDKIVKETEGYSG 420
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 19/255 (7%)
Query: 406 LVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCS 465
+V+L + F P G +L++GPPG+GKT+LA+ +A + A VS S
Sbjct: 231 MVILPAKRRDLFTGLRRPARG-LLLFGPPGNGKTMLAKAVASESQ------ATFFNVSAS 283
Query: 466 KLALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLV 525
L + V + + AI+ PS++ D++DSI+ST + ++ S + S+FL+
Sbjct: 284 SLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLK--SEFLI 341
Query: 526 DIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLK 585
G R I +P P ++ RK + K
Sbjct: 342 QFDGVTSNPDDLVIIIG--------ATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFK 393
Query: 586 HEIQRRHLQCDDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANA-TIYEHENPA 644
+++ + D + + + +GY G DL+ L + + R L AN TI ++ +
Sbjct: 394 TKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPI-RELGANILTIQANKVRS 452
Query: 645 LLREDFSQAMHDFLP 659
L +DF ++M P
Sbjct: 453 LRYDDFRKSMAVIRP 467
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFA--QAPLRLRSNVLLYGPPGCGKTHIVGAAAA 734
WDDV GL + A+ EM+ LP+K F + P R +LL+GPPG GKT + A A+
Sbjct: 219 WDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPAR---GLLLFGPPGNGKTMLAKAVAS 275
Query: 735 ASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 794
S F +V L +K++G +E+ V+ +F A + P ++F DE DSI R
Sbjct: 276 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEA 335
Query: 795 TDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERL 852
+ R+ ++FL + DGV V + AT++P LD A+LR RL + ++ P + R
Sbjct: 336 SRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRK 393
Query: 853 EILTVLSRKLPMA-SDIDLGTVANMTEGFSG 882
+ + P + SD D+ + TEG+SG
Sbjct: 394 LLFKTKLKCQPHSLSDGDIDKIVKETEGYSG 424
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 19/255 (7%)
Query: 406 LVLLSSASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTLAKSLENHKDILAHIIFVSCS 465
+V+L + F P G +L++GPPG+GKT+LA+ +A + A VS S
Sbjct: 235 MVILPAKRRDLFTGLRRPARG-LLLFGPPGNGKTMLAKAVASESQ------ATFFNVSAS 287
Query: 466 KLALEKVPIIRQEIANHINEAINHAPSIVIFDDLDSIVSTHDSEGSQPSTSVAGLSDFLV 525
L + V + + AI+ PS++ D++DSI+ST + ++ S + S+FL+
Sbjct: 288 SLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLK--SEFLI 345
Query: 526 DIMDEYGEKRQKSCGFGPIAFLAXXXXXXXXXXXXXXXGRFDFHIRLPAPAASERKAMLK 585
G R I +P P ++ RK + K
Sbjct: 346 QFDGVTSNPDDLVIIIG--------ATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFK 397
Query: 586 HEIQRRHLQCDDDVLLDVAVKCDGYDGYDLEILVDRTVHAAVCRFLPANA-TIYEHENPA 644
+++ + D + + + +GY G DL+ L + + R L AN TI ++ +
Sbjct: 398 TKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPI-RELGANILTIQANKVRS 456
Query: 645 LLREDFSQAMHDFLP 659
L +DF ++M P
Sbjct: 457 LRYDDFRKSMAVIRP 471
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 16/209 (7%)
Query: 677 WDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSN-VLLYGPPGCGKTHIVGAAAAA 735
+DD+G L ++++ +KE++ LP ++P+ F + L N +LL+GP G GKT + A A
Sbjct: 752 FDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATE 811
Query: 736 SSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 795
+ I++ ++++ E+ V+ VFS A+ +P ++F DE +S+ +
Sbjct: 812 AGANLINMS----MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESMLHR-------YR 860
Query: 796 DRVVNQFLTELDGVEI--LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLE 853
+ N+F+ DG+ V V AAT+RP LD A++R RL L P R +
Sbjct: 861 LKTKNEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSK 918
Query: 854 ILTVLSRKLPMASDIDLGTVANMTEGFSG 882
IL V+ K ++ D D+ VA+MT G+SG
Sbjct: 919 ILKVILSKEDLSPDFDIDEVASMTNGYSG 947
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 13/251 (5%)
Query: 642 NPALLREDFSQAMHD-FLPVAMRDITKSASDDGRSG-----WDDVGGLVDIQNAIKEMIE 695
N ++RE ++M F R + +S S D G W+ + GL + + +KE +
Sbjct: 70 NGNVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVV 129
Query: 696 LPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGA 755
+P K+P T+ L +LL+GPPG GKT + A A + F ++ +++K+ G
Sbjct: 130 MPIKYP-TYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGD 188
Query: 756 SEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEIL 812
SE+ +R +F A AP +F DE D+I +RG + + R+ + L ++DG++
Sbjct: 189 SEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKT 248
Query: 813 TG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLG 871
VFV AAT+ P LDAA+LR RL++ + P R + +L P +
Sbjct: 249 NELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHD 306
Query: 872 TVANMTEGFSG 882
+ +EG+SG
Sbjct: 307 VLVEKSEGYSG 317
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 13/251 (5%)
Query: 642 NPALLREDFSQAMHD-FLPVAMRDITKSASDDGRSG-----WDDVGGLVDIQNAIKEMIE 695
N ++RE ++M F R + +S S D G W+ + GL + + +KE +
Sbjct: 61 NGNVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVV 120
Query: 696 LPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGA 755
+P K+P T+ L +LL+GPPG GKT + A A + F ++ +++K+ G
Sbjct: 121 MPIKYP-TYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGD 179
Query: 756 SEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEIL 812
SE+ +R +F A AP +F DE D+I +RG + + R+ + L ++DG++
Sbjct: 180 SEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKT 239
Query: 813 TG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLG 871
VFV AAT+ P LDAA+LR RL++ + P R + +L P +
Sbjct: 240 NELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHD 297
Query: 872 TVANMTEGFSG 882
+ +EG+SG
Sbjct: 298 VLVEKSEGYSG 308
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 671 DDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVG 730
D G + VGGL D ++E IELP P+ F + ++ VLLYGPPG GKT +
Sbjct: 132 DPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 191
Query: 731 AAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRGHD 790
A A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R +
Sbjct: 192 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSE 251
Query: 791 NTGV---TDRVVNQFLTELDGVEILTGVF 816
T R + + L +LDG + L F
Sbjct: 252 GTSADREIQRTLMELLNQLDGFDQLGKGF 280
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 368 DPVSINSVEERAPEDPVSSNVSSLDWMEKTASDVINRMLVLLSSASGLWFGSYNLPLPGH 427
DPV N + E DP + + S++ + ++ R + L + F + P
Sbjct: 122 DPVVYNMLHE----DPGNISYSAVGGLGDQIREL--RESIELPLMNPELFLRVGIKPPKG 175
Query: 428 VLIYGPPGSGKTILARTLAKSLE-NHKDILAHIIFVSCSKLALEKVPIIRQEIANHINEA 486
VL+YGPPG+GKT+LAR +A +++ N +++ I K E +IR+ N A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII---DKYIGESARLIRE----MFNYA 228
Query: 487 INHAPSIVIFDDLDSIVSTHDSEGSQPSTSV 517
H P I+ D++D+I SEG+ +
Sbjct: 229 REHQPCIIFMDEIDAIGGRRFSEGTSADREI 259
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 39/219 (17%)
Query: 670 SDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAPL-RLRSNVLLYGPPGCGKTHI 728
SD G S + D+G L ++++ +KE++ LP + P+ F + L + +LL+GPPG GKT +
Sbjct: 937 SDIGVS-FSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTML 995
Query: 729 VGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKATAAAPCLLFFDEFDSIAPKRG 788
A A + FI++ + +K DS+ +R
Sbjct: 996 AKAVATEAGANFINISMSSITSK----------------------------VDSMLGRR- 1026
Query: 789 HDNTG---VTDRVVNQFLTELDGVEILTG--VFVFAATSRPDLLDAALLRPGRLDRLLFC 843
+N G ++ N+F+ DG+ V V AAT+RP LD A++R RL R L
Sbjct: 1027 -ENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1083
Query: 844 DFPSWHERLEILTVLSRKLPMASDIDLGTVANMTEGFSG 882
+ P R +IL+V+ K MA D+DL +ANMT+G+SG
Sbjct: 1084 NLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSG 1122
>AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH
protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008
Length = 1008
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 649 DFSQAMHDFLPVAMRDITKSASDDGRSGWDDVGGLVDIQNAIKEMIELPSKFPKTFAQAP 708
D + A + LPV TKS + G DV L+D + MI + + P + +
Sbjct: 471 DMAYAENFILPVGDVSETKSMYKEVVLG-GDVWDLLD-----ELMIYMGN--PMQYYEKD 522
Query: 709 LRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDVFSKAT 768
+ VLL GPPG GKT A S L F+ G E + + + + ++FS A
Sbjct: 523 VAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAK-INEMFSIAR 581
Query: 769 AAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQ-FLTELDGVEILTGVFVFA-------- 819
AP +F DE D+IA + H R + + +LDG + TG+ F+
Sbjct: 582 RNAPAFVFVDEIDAIAGR--HARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFI 639
Query: 820 -ATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMTE 878
AT+RPD LD +R GR+DR L+ P +R++I V S +A DID G + T
Sbjct: 640 CATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTV 699
Query: 879 GFSG 882
GFSG
Sbjct: 700 GFSG 703
>AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease family
| chr3:1146943-1153341 REVERSE LENGTH=1320
Length = 1320
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 4/159 (2%)
Query: 701 PKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPEL-LNKYIGASEQA 759
PK F + R VL+ G G GKT + A AA + + ++V+ EL ++G S
Sbjct: 806 PKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAAN 865
Query: 760 VRDVFSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEILTGVF 816
VR++F A AP ++F ++FD A RG H + +NQ L ELDG E GV
Sbjct: 866 VRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDGFEKQDGVV 925
Query: 817 VFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+ A T +D AL RPGR+DR+ P+ ER IL
Sbjct: 926 LMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERIL 964
>AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:2020471-2023673
FORWARD LENGTH=609
Length = 609
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 16/245 (6%)
Query: 649 DFSQAMHDFLPVAMRDITKSASDDGRS--GWDDVGGLVDIQNAIKEMIELPSKFPKTFAQ 706
D S + + + V + + K DD WD++ G + I++ I + P+ +
Sbjct: 288 DKSISQLESMGVRIYGVNKPLGDDSMDEISWDNIAGYDQQKREIEDTILMALHSPEVYDD 347
Query: 707 APLRLRSN--------VLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQ 758
RS VL GPPG GKT A + + + V +++KY G SE+
Sbjct: 348 IVRGTRSKFESNRPRAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESER 407
Query: 759 AVRDVFSKATAAAP-CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFV 817
+ VFS+A ++F DE D+ A R + T RV++ L ++DG E V V
Sbjct: 408 LLGAVFSQANELPDGAIIFLDEIDAFAISRDSEMHEATRRVLSVLLRQIDGFEQEKKVVV 467
Query: 818 FAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDIDLGTVANMT 877
AAT+R LD AL+ R D ++ D P R EI+ +++L S +L +A T
Sbjct: 468 IAATNRKQDLDPALI--SRFDSMIMFDLPDLQTRQEIIAQYAKQL---SKPELVQLAQAT 522
Query: 878 EGFSG 882
E SG
Sbjct: 523 EAMSG 527
>AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12745752-12748995
REVERSE LENGTH=475
Length = 475
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 715 VLLYGPPGCGKTHIVGAAAAASSLR---------FISVKGPELLNKYIGASEQAVRDVFS 765
+LL+GPPG GKT + A A S+R I V L +K+ S + V +F
Sbjct: 213 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 272
Query: 766 KATAAAP-----CLLFFDEFDSIAPKRGHDNTGV----TDRVVNQFLTELDGVEILTGVF 816
K + DE +S+A R +G + RVVN LT++D ++ V
Sbjct: 273 KIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVI 332
Query: 817 VFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIL 855
+ ++ +D A + R D + P+ H R EIL
Sbjct: 333 ILTTSNITTAIDVAFV--DRADIKAYVGPPTLHVRYEIL 369
>AT5G16930.1 | Symbols: | AAA-type ATPase family protein |
chr5:5568578-5571565 FORWARD LENGTH=644
Length = 644
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 642 NPALLREDFSQAMHDFLPVAMRDITKSASDDGRSGWDDVG---GLVDIQNAIKEMIE-LP 697
P+L+RE S+ + + A R + + G+ G G V ++ A+++ IE L
Sbjct: 328 QPSLIRES-SRGKYPWSGSASR-VLSTLRGGGKESTSKTGKGFGDVILRPALEKRIEQLA 385
Query: 698 SKFPKTFA-QAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGAS 756
+ T A QAP R N+L YGPPG GKT A S L + + G ++ +GA
Sbjct: 386 NATANTKAHQAPFR---NILFYGPPGTGKTMAARELARRSGLDYALMTGGDVAP--LGA- 439
Query: 757 EQAVRDV-----FSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEI 811
QAV + +SK + LLF DE D+ +R R + L+ +
Sbjct: 440 -QAVTKIHQLFDWSKKSKRG-LLLFIDEADAFLCERNKTYMSEAQR------SALNALLF 491
Query: 812 LTG-----VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTV 857
TG + + AT+RP LD+A+ R+D L P ER ++L +
Sbjct: 492 RTGDQSKDIVLALATNRPGDLDSAV--ADRIDETLEFPLPGEEERFKLLNL 540