Miyakogusa Predicted Gene
- Lj2g3v2925130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2925130.1 Non Chatacterized Hit- tr|I1JVG6|I1JVG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12658
PE,40.15,2e-18,SUBFAMILY NOT NAMED,NULL; SER/THR-RICH PROTEIN T10 IN
DGCR REGION,Protein of unknown function DUF833,gene.g43935.t1.1
(196 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38260.1 | Symbols: | Protein of unknown function (DUF833) |... 134 4e-32
AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) |... 65 2e-11
AT1G20680.2 | Symbols: | Protein of unknown function (DUF833) |... 61 4e-10
AT1G20680.1 | Symbols: | Protein of unknown function (DUF833) |... 61 5e-10
AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) |... 54 6e-08
>AT4G38260.1 | Symbols: | Protein of unknown function (DUF833) |
chr4:17937077-17938210 REVERSE LENGTH=275
Length = 275
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 32/213 (15%)
Query: 16 KIFLLPTLEATFHFVSSRSLGSIVEGLSKGNQSPEEFAEQVLKEAHQYNGFNLILADMST 75
++ L + F +++S G + + +SP EFAE++ E YNGFNL++A + +
Sbjct: 61 RLAFLTNFKEASSFPAAKSRGDLPLRYLQSEKSPAEFAEEIQDEISLYNGFNLVVAHVLS 120
Query: 76 SSMVYVFNRPKPD---LLSVAPGVH-------------AERLRHSFKELIDQYGESEFPI 119
SM+Y+ NRP + V+PG+H RLR F++L+ + G EFP+
Sbjct: 121 KSMIYITNRPPHGDKLVTQVSPGIHVLSNANLDSPWPKCLRLREGFQQLLAENGSGEFPV 180
Query: 120 KEMVEKLMTNTIKDEEYMLPGIYPPERELPVSS---------GRYGTRSSSALLVKS--- 167
K MVE++MTNT+KDEE LP ++ PE E +SS GRYGTRS SA++VKS
Sbjct: 181 KTMVEEVMTNTVKDEETELPHVFTPETEYHLSSIFVDMQRPTGRYGTRSISAIIVKSHGD 240
Query: 168 ---NKEATFYEKHLDQ-EKWKEKMVTYQIIEAE 196
+ E FYE+HL++ + WKE + II+ +
Sbjct: 241 GGGDGEICFYERHLEEGDSWKEHTQQFVIIQNQ 273
>AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) |
chr1:7200394-7201538 FORWARD LENGTH=266
Length = 266
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 36/176 (20%)
Query: 46 NQSPEEFAEQVLKE---AHQYNGFNLILADMSTSSMVYVFNRPKPDLLS--------VAP 94
N+SPE+FA+ + F+LI+AD++++SM+Y+ KP V P
Sbjct: 99 NESPEDFAKSSAADYIRNKNTAAFHLIVADIASNSMLYI---SKPRFSDYGIVYTEPVGP 155
Query: 95 GVHAE--------------RLRHSFKELIDQYGESEFPIKEMVEKLMTNTIKD-EEYMLP 139
GVH R+RHSF E+I++ E PI+++ E +M + +K E +L
Sbjct: 156 GVHTLSSAGLDSDVGYRDLRMRHSFCEMINR--ERLPPIRDIAE-IMYDPVKAYESVLLS 212
Query: 140 GIYPPERELPVSSGRYGTRSSSALLVKSNKEATFYEKHLD--QEKWKEKMVTYQII 193
I+ + + + YGTR ++AL+VK KE F+E++ + + W + + II
Sbjct: 213 SIFFVD--MKIGYEHYGTRITTALVVKRTKEVLFFERYREIFNDDWDDHDFAFTII 266
>AT1G20680.2 | Symbols: | Protein of unknown function (DUF833) |
chr1:7169382-7170587 FORWARD LENGTH=263
Length = 263
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 30/176 (17%)
Query: 44 KGNQSPEEFAEQVL---KEAHQYNGFNLILADMSTSSMVYVF--NRPKPDLL--SVAPGV 96
+GN SPE+FA +V KE ++ + ++L++ADM++SSMV++ + K D++ +V GV
Sbjct: 90 EGNMSPEQFANEVKVHEKETNERHAYSLVVADMTSSSMVHILKPSDTKSDVVIETVPFGV 149
Query: 97 HAER---------------LRHSFKELIDQYGE-SEFPIKEMVEKLMTNTIKDEEYMLPG 140
H LR F +++ G + ++E+ + M + + +
Sbjct: 150 HTLSSYEGLDSTDSARDLLLRRLFTQMVGNLGNVQQRQMEEIAGRFMYDAQAGRDAVF-- 207
Query: 141 IYPPERELP---VSSGRYGTRSSSALLVKSNKEATFYEKHLDQE-KWKEKMVTYQI 192
Y E P + + R+GT S++AL+VK +E +EK+++Q W + I
Sbjct: 208 -YHSRDEHPNGKLGTQRFGTTSTTALVVKRTREVMLFEKYMEQNGAWNTNNFAFNI 262
>AT1G20680.1 | Symbols: | Protein of unknown function (DUF833) |
chr1:7169402-7170587 FORWARD LENGTH=266
Length = 266
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 45 GNQSPEEFAEQVL---KEAHQYNGFNLILADMSTSSMVYVF--NRPKPDLL--SVAPGVH 97
GN SPE+FA +V KE ++ + ++L++ADM++SSMV++ + K D++ +V GVH
Sbjct: 94 GNMSPEQFANEVKVHEKETNERHAYSLVVADMTSSSMVHILKPSDTKSDVVIETVPFGVH 153
Query: 98 AER---------------LRHSFKELIDQYGE-SEFPIKEMVEKLMTNTIKDEEYMLPGI 141
LR F +++ G + ++E+ + M + + +
Sbjct: 154 TLSSYEGLDSTDSARDLLLRRLFTQMVGNLGNVQQRQMEEIAGRFMYDAQAGRDAVF--- 210
Query: 142 YPPERELP---VSSGRYGTRSSSALLVKSNKEATFYEKHLDQE-KWKEKMVTYQI 192
Y E P + + R+GT S++AL+VK +E +EK+++Q W + I
Sbjct: 211 YHSRDEHPNGKLGTQRFGTTSTTALVVKRTREVMLFEKYMEQNGAWNTNNFAFNI 265
>AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) |
chr1:7194256-7195400 FORWARD LENGTH=256
Length = 256
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 32/159 (20%)
Query: 44 KGNQSPEEFAEQVLKEAHQYNG--FNLILADMSTSSMVYVFNRPKPDLLS--------VA 93
K N SPE+FA+ + ++ + G ++LI+AD+ ++SM Y++ KP L V
Sbjct: 88 KSNLSPEDFADSLALDSGRNTGIAYHLIVADIVSNSMFYIY---KPSLSEDGMVYTEPVG 144
Query: 94 PGVHAE--------------RLRHSFKELIDQYGESEFPIKEMVEKLMTNTIKD-EEYML 138
PGVH RL+ F E I++ E PI + E++M +T++ L
Sbjct: 145 PGVHTLSSAGLDSEVGHRDLRLKRYFSERINR--ELPEPISGLAEEVMYDTVEAINGDPL 202
Query: 139 PGIYPPERELPVSSGRYGTRSSSALLVKSNKEATFYEKH 177
I+ + + + YGTR ++AL+V+ + F+E++
Sbjct: 203 SSIFVVD--TLIENEHYGTRCTTALVVRRTMQVRFFERY 239