Miyakogusa Predicted Gene
- Lj2g3v2905020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2905020.1 tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein
OS=Lotus japonicus GN=CM0545.290.nc PE=4
SV=1,98.84,0,UCH_2_1,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2, conserved site; no description,TRAF-,CUFF.39491.1
(1118 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1848 0.0
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1841 0.0
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1838 0.0
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1831 0.0
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1628 0.0
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 137 3e-32
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 130 8e-30
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 130 8e-30
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 121 2e-27
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 120 5e-27
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 119 2e-26
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 109 1e-23
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 108 1e-23
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 104 3e-22
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 103 1e-21
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 102 2e-21
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 101 3e-21
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 100 8e-21
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322... 97 5e-20
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 96 2e-19
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 96 2e-19
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 96 2e-19
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 94 7e-19
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 93 1e-18
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 93 1e-18
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 92 2e-18
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 92 3e-18
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 91 5e-18
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 90 1e-17
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 89 1e-17
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 89 2e-17
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 89 2e-17
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 89 2e-17
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 87 8e-17
AT3G58440.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 87 8e-17
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 84 7e-16
AT2G32870.1 | Symbols: | TRAF-like family protein | chr2:139449... 82 2e-15
AT2G32880.1 | Symbols: | TRAF-like family protein | chr2:139489... 81 4e-15
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 80 8e-15
AT2G42460.2 | Symbols: | TRAF-like family protein | chr2:176780... 79 1e-14
AT2G42460.1 | Symbols: | TRAF-like family protein | chr2:176763... 79 1e-14
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 79 1e-14
AT4G09780.1 | Symbols: | TRAF-like family protein | chr4:615953... 79 2e-14
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 79 3e-14
AT4G09770.2 | Symbols: | TRAF-like family protein | chr4:615453... 77 5e-14
AT4G09770.1 | Symbols: | TRAF-like family protein | chr4:615453... 77 5e-14
AT2G42480.1 | Symbols: | TRAF-like family protein | chr2:176858... 76 2e-13
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:923831... 76 2e-13
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 75 4e-13
AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein... 73 9e-13
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:920872... 72 2e-12
AT4G01390.1 | Symbols: | TRAF-like family protein | chr4:570242... 72 2e-12
AT3G58400.1 | Symbols: | TRAF-like family protein | chr3:216026... 72 2e-12
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:920049... 72 2e-12
AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein | chr1:216... 71 4e-12
AT3G20360.1 | Symbols: | TRAF-like family protein | chr3:709995... 70 7e-12
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:197749... 70 7e-12
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:215979... 69 2e-11
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 69 2e-11
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 68 4e-11
AT3G58430.1 | Symbols: | TRAF-like family protein | chr3:216131... 67 6e-11
AT3G58290.3 | Symbols: | TRAF-like superfamily protein | chr3:2... 67 7e-11
AT3G28220.1 | Symbols: | TRAF-like family protein | chr3:105244... 67 8e-11
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 67 8e-11
AT3G20370.1 | Symbols: | TRAF-like family protein | chr3:710548... 66 1e-10
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 66 2e-10
AT4G00780.1 | Symbols: | TRAF-like family protein | chr4:334779... 65 2e-10
AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:142759... 65 2e-10
AT2G04170.5 | Symbols: | TRAF-like family protein | chr2:141766... 65 3e-10
AT2G04170.4 | Symbols: | TRAF-like family protein | chr2:141740... 64 4e-10
AT2G04170.3 | Symbols: | TRAF-like family protein | chr2:141740... 64 4e-10
AT3G46190.1 | Symbols: | TRAF-like family protein | chr3:169658... 64 4e-10
AT2G04170.2 | Symbols: | TRAF-like family protein | chr2:141740... 64 5e-10
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:141740... 64 5e-10
AT2G15710.1 | Symbols: | TRAF-like family protein | chr2:684264... 64 6e-10
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 64 7e-10
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 62 2e-09
AT3G22080.1 | Symbols: | TRAF-like family protein | chr3:777781... 62 2e-09
AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:922932... 61 4e-09
AT1G65050.1 | Symbols: | TRAF-like superfamily protein | chr1:2... 60 6e-09
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:922607... 60 8e-09
AT2G42470.1 | Symbols: | TRAF-like family protein | chr2:176798... 60 1e-08
AT5G52330.2 | Symbols: | TRAF-like superfamily protein | chr5:2... 60 1e-08
AT1G65150.2 | Symbols: | TRAF-like family protein | chr1:242041... 59 2e-08
AT1G65150.1 | Symbols: | TRAF-like family protein | chr1:242041... 59 2e-08
AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein... 58 4e-08
AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:9... 57 9e-08
AT5G26280.2 | Symbols: | TRAF-like family protein | chr5:920872... 54 5e-07
AT1G69660.1 | Symbols: | TRAF-like family protein | chr1:261996... 53 1e-06
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 51 4e-06
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 51 6e-06
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 1848 bits (4787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1119 (79%), Positives = 977/1119 (87%), Gaps = 4/1119 (0%)
Query: 1 MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
MT+MTP P+DQ EDEEMLVP++DL + QPMEV AA TVE+QP E+PP +FTW
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120
Query: 121 SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
SLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV
Sbjct: 121 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180
Query: 181 VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 181 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240
Query: 241 SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
Query: 301 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 301 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 361 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
Query: 421 RDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 480
R+DGKYLSPDADR+VRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 481 TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
KRALEEQYGGEEELPQTNPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
HLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 541 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600
Query: 600 VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
+QKQ F FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 601 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
Query: 660 NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
NK + AELKLFLEVE DLRPI P +K+K+DILLFFKLYDPEK L Y GRL VKS+ K
Sbjct: 661 NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719
Query: 720 PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
P +I +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR Q+EDGDIICFQK P
Sbjct: 720 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778
Query: 780 AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
++ E YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 779 LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 838
Query: 840 NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 839 GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 898
Query: 900 GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 899 GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 958
Query: 960 YKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGE 1019
YK+FP E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QNQ Q+QNFGE
Sbjct: 959 YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGE 1017
Query: 1020 PFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRD 1079
PFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+V NRFQRRD
Sbjct: 1018 PFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRD 1077
Query: 1080 VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
VYGA+EQYLGLEH D PKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 VYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1116
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 1841 bits (4769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1119 (79%), Positives = 976/1119 (87%), Gaps = 5/1119 (0%)
Query: 1 MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
MT+MTP P+D EDEEMLVP++DL + QPMEV AA TVE+QP E+PP +FTW
Sbjct: 1 MTMMTPPPVDP-EDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 59
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 60 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 119
Query: 121 SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
SLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV
Sbjct: 120 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 179
Query: 181 VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 180 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239
Query: 241 SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 240 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299
Query: 301 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 300 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 360 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 419
Query: 421 RDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 480
R+DGKYLSPDADR+VRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 481 TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
KRALEEQYGGEEELPQTNPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 480 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 539
Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
HLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 540 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 599
Query: 600 VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
+QKQ F FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 600 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 659
Query: 660 NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
NK + AELKLFLEVE DLRPI P +K+K+DILLFFKLYDPEK L Y GRL VKS+ K
Sbjct: 660 NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 718
Query: 720 PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
P +I +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR Q+EDGDIICFQK P
Sbjct: 719 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 777
Query: 780 AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
++ E YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 778 LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 837
Query: 840 NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 838 GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 897
Query: 900 GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 898 GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 957
Query: 960 YKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGE 1019
YK+FP E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QNQ Q+QNFGE
Sbjct: 958 YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGE 1016
Query: 1020 PFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRD 1079
PFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+V NRFQRRD
Sbjct: 1017 PFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRD 1076
Query: 1080 VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
VYGA+EQYLGLEH D PKR+YA NQNRH +EKPVKIYN
Sbjct: 1077 VYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1115
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 1838 bits (4760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1118 (78%), Positives = 978/1118 (87%), Gaps = 3/1118 (0%)
Query: 1 MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
MT+MTP P+DQQEDEEMLVP+ DL E QPMEV AA VE+ P E+PP +FTW
Sbjct: 1 MTMMTPPPLDQQEDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPPPEDPPSLKFTWT 59
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
I F+R+N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+ NLPYGWSRY+QF
Sbjct: 60 IPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQF 119
Query: 121 SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
SLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYL+NDT+++EAEV
Sbjct: 120 SLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVA 179
Query: 181 VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 180 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239
Query: 241 SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 240 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299
Query: 301 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 300 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
GDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDLD
Sbjct: 360 GDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 419
Query: 421 RDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 480
R+DG+YLSPDAD++VRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420 REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 481 TKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVDEKDIAX 540
KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 480 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 539
Query: 541 XXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRV 600
HL+T IKVAR++D+ EQIGK+IYFDLVDH+KVRSFR+
Sbjct: 540 HLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRI 599
Query: 601 QKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSN 660
QKQ F FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPL+P EE Q+VGQ+RE SN
Sbjct: 600 QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASN 659
Query: 661 KVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP 720
K +NAELKLFLE+E GPD PI P +KT +DILLFFKLYDPE LRYVGRL VKS+ KP
Sbjct: 660 KANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKP 719
Query: 721 SEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPA 780
+I+ +LN+MAG+ PDEEI L+EEIKFEP VMCE IDKK +FR Q+EDGDIIC+QK P
Sbjct: 720 MDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQK-PL 778
Query: 781 MDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLN 840
E RYPDVPS+LEYV NR++V FR+L+KPKED+F +E+S+L+TYDDVVE+VA++L
Sbjct: 779 SIEESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLG 838
Query: 841 LDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQG 900
LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQG
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 901 LKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIY 960
LKTLKVAF+ ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRLLEVF+HKIY
Sbjct: 899 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 958
Query: 961 KVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEP 1020
K+FP E+IE INDQYWTLRAEE+PEEEKN+GP+DRLIHVYHFTK+ QNQ Q+QNFGEP
Sbjct: 959 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGEP 1017
Query: 1021 FFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRDV 1080
FFLVI EGETL EIK RIQKKL VPD++F KWKFA F++GRP+YL D+D+V NRFQRRDV
Sbjct: 1018 FFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDV 1077
Query: 1081 YGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
YGAWEQYLGLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 YGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1115
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 1831 bits (4742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1118 (78%), Positives = 977/1118 (87%), Gaps = 4/1118 (0%)
Query: 1 MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
MT+MTP P+DQ EDEEMLVP+ DL E QPMEV AA VE+ P E+PP +FTW
Sbjct: 1 MTMMTPPPLDQ-EDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPPPEDPPSLKFTWT 58
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
I F+R+N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+ NLPYGWSRY+QF
Sbjct: 59 IPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQF 118
Query: 121 SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
SLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYL+NDT+++EAEV
Sbjct: 119 SLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVA 178
Query: 181 VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 179 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 238
Query: 241 SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 239 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 298
Query: 301 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 299 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 358
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
GDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDLD
Sbjct: 359 GDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 418
Query: 421 RDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 480
R+DG+YLSPDAD++VRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 419 REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
Query: 481 TKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVDEKDIAX 540
KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 479 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 538
Query: 541 XXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRV 600
HL+T IKVAR++D+ EQIGK+IYFDLVDH+KVRSFR+
Sbjct: 539 HLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRI 598
Query: 601 QKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSN 660
QKQ F FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPL+P EE Q+VGQ+RE SN
Sbjct: 599 QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASN 658
Query: 661 KVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP 720
K +NAELKLFLE+E GPD PI P +KT +DILLFFKLYDPE LRYVGRL VKS+ KP
Sbjct: 659 KANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKP 718
Query: 721 SEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPA 780
+I+ +LN+MAG+ PDEEI L+EEIKFEP VMCE IDKK +FR Q+EDGDIIC+QK P
Sbjct: 719 MDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQK-PL 777
Query: 781 MDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLN 840
E RYPDVPS+LEYV NR++V FR+L+KPKED+F +E+S+L+TYDDVVE+VA++L
Sbjct: 778 SIEESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLG 837
Query: 841 LDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQG 900
LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQG
Sbjct: 838 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 897
Query: 901 LKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIY 960
LKTLKVAF+ ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRLLEVF+HKIY
Sbjct: 898 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 957
Query: 961 KVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEP 1020
K+FP E+IE INDQYWTLRAEE+PEEEKN+GP+DRLIHVYHFTK+ QNQ Q+QNFGEP
Sbjct: 958 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGEP 1016
Query: 1021 FFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRDV 1080
FFLVI EGETL EIK RIQKKL VPD++F KWKFA F++GRP+YL D+D+V NRFQRRDV
Sbjct: 1017 FFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDV 1076
Query: 1081 YGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
YGAWEQYLGLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1077 YGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1114
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 1628 bits (4217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/985 (80%), Positives = 860/985 (87%), Gaps = 3/985 (0%)
Query: 1 MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
MT+MTP P+DQ EDEEMLVP++DL + QPMEV AA TVE+QP E+PP +FTW
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120
Query: 121 SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
SLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV
Sbjct: 121 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180
Query: 181 VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 181 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240
Query: 241 SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
Query: 301 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 301 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 361 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
Query: 421 RDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 480
R+DGKYLSPDADR+VRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 481 TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
KRALEEQYGGEEELPQTNPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
HLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 541 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600
Query: 600 VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
+QKQ F FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 601 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
Query: 660 NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
NK + AELKLFLEVE DLRPI P +K+K+DILLFFKLYDPEK L Y GRL VKS+ K
Sbjct: 661 NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719
Query: 720 PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
P +I +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR Q+EDGDIICFQK P
Sbjct: 720 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778
Query: 780 AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
++ E YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 779 LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 838
Query: 840 NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 839 GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 898
Query: 900 GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 899 GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 958
Query: 960 YKVFPPNEKIETINDQYWTLRAEEV 984
YK+FP E+IE INDQYWTLRAEEV
Sbjct: 959 YKIFPSTERIENINDQYWTLRAEEV 983
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV--DYLSMYLDVADS 107
++ + +F+W I NFS + +K+YS+ FV+ G +WR+L FPKGN+ D+LS+YLDVA+S
Sbjct: 4 DQADKKKFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAES 63
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
+LP GW R+AQFS +VN I K + RK+T H F + SDWGFT+ +PL EL G+
Sbjct: 64 ESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGF 123
Query: 168 LLNDTL--VVEAEVL-VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQ 215
L+ L VVE EVL V +++ +S G+ L +Q Y+ SL +
Sbjct: 124 LVKGELKIVVEIEVLEVIGLLNVSESESMDVNGFHVLPSQAK--YVKSLFE 172
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 87/131 (66%)
Query: 55 SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGW 114
++FTW I NFS +K YS+ F V G KWR+L FPKGN V+ LS+YL VA S LP GW
Sbjct: 7 NKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGW 66
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLV 174
R+A F +VVNQ+ ++ + ++T++ F+A SDWGFTS + L +L+D G+L+N L
Sbjct: 67 RRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELK 126
Query: 175 VEAEVLVRRIV 185
+ +V V ++
Sbjct: 127 IVVDVSVLEVI 137
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 87/131 (66%)
Query: 55 SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGW 114
++FTW I NFS +K YS+ F V G KWR+L FPKGN V+ LS+YL VA S LP GW
Sbjct: 7 NKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGW 66
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLV 174
R+A F +VVNQ+ ++ + ++T++ F+A SDWGFTS + L +L+D G+L+N L
Sbjct: 67 RRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELK 126
Query: 175 VEAEVLVRRIV 185
+ +V V ++
Sbjct: 127 IVVDVSVLEVI 137
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 2/144 (1%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWS 115
+ TW I+NFS ++ KK+YS+ F+VGG KWR L++PKGNNVDYL +YL+VAD +L W
Sbjct: 8 KITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYESLSPEWR 67
Query: 116 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
R+A++ L VVNQ K + + + Q F+ + WG S PL E+ G+L+N L +
Sbjct: 68 RHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGELKI 127
Query: 176 EAEVLVRRIVDYWTYDSKKETGYV 199
AE+ V ++ D +ET +
Sbjct: 128 VAEIEVLEVIG--KLDVSEETSTI 149
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 79/124 (63%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWS 115
+F W I NFS +N ++ +S V+G KWR++ FPKG DYLS+YL+VAD +LP GW
Sbjct: 8 KFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWR 67
Query: 116 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
RY +F +VNQ+ + +V+++TQ F+ WGF + + L EL G+L+N +++
Sbjct: 68 RYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMI 127
Query: 176 EAEV 179
AEV
Sbjct: 128 VAEV 131
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Query: 55 SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN--VDYLSMYLDVADSTNLPY 112
++FTW I NFS + + S FV+GG KWR+L++P+G N D+LS++L+VAD +LP
Sbjct: 7 NKFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPP 66
Query: 113 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
GWSR+A++ L +VNQ +K + R + FN + WG ++ +PL +L+ G+L+ND
Sbjct: 67 GWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDE 126
Query: 173 LVVEAEVLVRRIV 185
L + AEV V ++
Sbjct: 127 LKIVAEVNVLEVI 139
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSTNLPYGW 114
+ TW I NF+ + +YS+ FVVGG KW + +PKG NN + LS++L VA T+LP GW
Sbjct: 8 KITWTIKNFASLLSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVPTSLPSGW 67
Query: 115 SRYAQFSLAVVNQIQNKYTVRK--DTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
R+ +F L +VNQ+ +K + K + + F+ + ++WG +S PL E++ G+LLN
Sbjct: 68 RRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFLLNGE 127
Query: 173 L--VVEAEVL 180
L VVE +VL
Sbjct: 128 LKIVVEIKVL 137
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWS 115
+F W I NFS + KK YS F +G KWR+ I+PKGNN DYLS++L+VAD +LP GW
Sbjct: 29 KFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFKSLPSGWR 88
Query: 116 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
RY + L +V Q WGF +PL +L+D G+L+N L++
Sbjct: 89 RYVKLRLYIVKQ-----------------EMWGWGFLYMLPLTKLHDEKEGFLVNGELMI 131
Query: 176 EAEVLVRRIVD 186
AEV +D
Sbjct: 132 VAEVDALGFID 142
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 44/235 (18%)
Query: 57 FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD---YLSMYLDVADST-NLPY 112
FTW I N S + ++ S++FVVGG KWR++ +P+ N+ D LS+YL V D +LP
Sbjct: 9 FTWVIKNLSTLQGLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCCESLPS 68
Query: 113 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
GW R+A+FSL +VNQ+ + ++TQ F+ WGF + L ++ D G+L+ND
Sbjct: 69 GWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVNDE 128
Query: 173 LVVEAEVLVRRIVDYWTYDSKKET----GY-----------------------VGLKNQG 205
++V V V +V E+ G+ +KNQ
Sbjct: 129 VMVAVAVDVIEVVGSLDAPEMSESMDIKGFKVLPSQVKSVNRLFESHPDIASKFSIKNQS 188
Query: 206 -ATCYMNSLL---QTLYHIPYFRKAVYHMPTTENDMPAGSIPLA-LQSLFYKLQY 255
T YMN LL +TL+ P M +E+D+ LA ++S+ +KL +
Sbjct: 189 LKTAYMNVLLCLAETLHQSP--------MEISEDDLSDAKTTLAYMKSVGFKLDW 235
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
Query: 57 FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGN--------NVDYLSMYLDVADST 108
TW I+NFS + ++S+ FVVG KWR+ +PKGN + L++YL+VA+S
Sbjct: 10 ITWVIENFSSLQSASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALYLNVANSK 69
Query: 109 NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 168
+ P GW+R+ +FSL +VNQ K + ++QH F+ + + GF + +PL L+ + G+L
Sbjct: 70 SFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLH-TNEGFL 128
Query: 169 LNDTLVVEAEVLVRRIV 185
+N L + A+V V +V
Sbjct: 129 VNGELTLVAKVEVLEVV 145
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 147/358 (41%), Gaps = 40/358 (11%)
Query: 195 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQ 254
E+ GL N GATCY NS+LQ LY FR+ V+ + + + + + LF +L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEV--HVLKQNPVLDQIARLFAQLH 159
Query: 255 YSDTS-VATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKM--KGTVVEGTIQKLFE 311
S S V + K+ D+ +Q D E +L LE + G + +Q LF
Sbjct: 160 ASQKSFVDSDAFVKTL---ELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAKTIVQDLFS 216
Query: 312 G---HHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLEGDNKYHAE 368
G H +C S++ E FY L+L+VKG + AS + Y+ +E L GDN+Y
Sbjct: 217 GSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCG 276
Query: 369 QYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDDGKYL 427
+ DA + + PPV+ QLKR + KI + FP LD+ G L
Sbjct: 277 SCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDM----GSRL 332
Query: 428 SPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKEDTKRALEE 487
+ ++ +N Y A I+ + W++FDDE V+ E KR E
Sbjct: 333 A-ESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVS-ELGKRPCNE 390
Query: 488 QYGGEEELPQTNPGFNNTPFKFT-------------------KYSNAYMLVYIREADK 526
PQ+ + T S+AYML+Y DK
Sbjct: 391 ---ASSSTPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSDAYMLMYSLRCDK 445
>AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:9974912-9977927 REVERSE
LENGTH=358
Length = 358
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGW 114
+FTW I N++ + +YS+ F G KWR+L FPKGNN+ DY +Y+ V +S +LP GW
Sbjct: 96 KFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNSESLPSGW 155
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLV 174
R A+ S +VNQI + +++ + F+ +++ GF S L E+ +G+L+N +
Sbjct: 156 RRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGFLVNGEVK 215
Query: 175 VEAEVLVRRIV 185
+ AEV V ++
Sbjct: 216 IVAEVDVLEVI 226
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN--VDYLSMYLDVADSTNLPYG 113
+F W I NF+ ++ ++YS+ F G KWR++ +PK + S++L V DS +LP G
Sbjct: 9 KFAWVIKNFNSLDTTRVYSDTFKAGRCKWRLVAYPKRRDRYTTSFSLFLCVPDSESLPSG 68
Query: 114 WSRYAQF 120
W R A+
Sbjct: 69 WRRRAKL 75
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADS 107
+E+ ++F W I NFS + ++++S++FVVG KWR++ +PKG + S++L V D
Sbjct: 1 MEKEADNKFRWVIKNFSSLGSERVFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTDF 60
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
LP W R+ + L VVNQ+ + ++ K+TQ F+ + WGF + +PL EL + G+
Sbjct: 61 KTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGGF 120
Query: 168 L 168
L
Sbjct: 121 L 121
>AT2G01790.1 | Symbols: | TRAF-like family protein |
chr2:341322-342480 REVERSE LENGTH=269
Length = 269
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 59 WRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSTNLPYGWS 115
W I+NFS ++ ++YS++FVVGG KW +L P+GNN DY S+YL V DS LP GW
Sbjct: 11 WVINNFSFLDSDRVYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSEYLPSGWR 70
Query: 116 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
R A+ S +VNQ+ + + +++ + F+ + + GF S L +G+L+N + +
Sbjct: 71 RRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFLVNGEVDI 130
Query: 176 EAEVLVRRIV 185
AEV V ++
Sbjct: 131 VAEVDVVEVI 140
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 86/132 (65%), Gaps = 7/132 (5%)
Query: 58 TWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGWSR 116
TW I+ FS +N ++L +VF VGGYKW +LI+P+G +V ++LS++L VA L GWS
Sbjct: 72 TWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVAHHEKLLPGWSH 131
Query: 117 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND-TLVV 175
+AQF++AV N+ K + DT H+F +E DWG+ F+ L +L + G++ + L +
Sbjct: 132 FAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFIDDSGCLTI 187
Query: 176 EAEV-LVRRIVD 186
+A+V ++R VD
Sbjct: 188 KAQVQVIRERVD 199
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 86/132 (65%), Gaps = 7/132 (5%)
Query: 58 TWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGWSR 116
TW I+ FS +N ++L +VF VGGYKW +LI+P+G +V ++LS++L VA L GWS
Sbjct: 72 TWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVAHHEKLLPGWSH 131
Query: 117 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND-TLVV 175
+AQF++AV N+ K + DT H+F +E DWG+ F+ L +L + G++ + L +
Sbjct: 132 FAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFIDDSGCLTI 187
Query: 176 EAEV-LVRRIVD 186
+A+V ++R VD
Sbjct: 188 KAQVQVIRERVD 199
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 87/134 (64%), Gaps = 7/134 (5%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGW 114
++TW+I FS + ++ S VF GGYKW +LI+P+G +V ++LS++L VA+ L GW
Sbjct: 69 QYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGW 128
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL-LNDTL 173
S++AQF+++V++Q K DT H+F +E DWG+ FM L +L D G++ + L
Sbjct: 129 SQFAQFTISVLSQDLKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCL 184
Query: 174 VVEAEV-LVRRIVD 186
+EA+V ++R VD
Sbjct: 185 TIEAKVQVIRERVD 198
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD---YLSMYLDVA 105
+E+ + + TW I NFS + + + S++FVVG KW ++ +PKGN LS+YL+VA
Sbjct: 1 MEDQYEKKITWTIKNFSFVQSQAIDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVA 60
Query: 106 DSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSR 165
D +LP GW R+ ++ L VVNQ+ K + ++ Q F GF + +PL +L D +
Sbjct: 61 DFQSLPNGWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNG 120
Query: 166 GYLLN 170
G+L+N
Sbjct: 121 GFLVN 125
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 81/132 (61%), Gaps = 13/132 (9%)
Query: 59 WRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV---DYLSMYLDVADSTNLPYG-- 113
W +++F+R+ K L+S+ F VGGY R+L++P+G++ Y+S+YL + D P G
Sbjct: 75 WTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMD----PRGTT 130
Query: 114 ---WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLL- 169
W +A + L++VN + + T+ KD+ H+F++++ G+ F + DP G+L
Sbjct: 131 SSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMGFLFN 190
Query: 170 NDTLVVEAEVLV 181
ND+L++ A++L+
Sbjct: 191 NDSLLITADILI 202
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 84/138 (60%), Gaps = 12/138 (8%)
Query: 55 SRFTWRIDNFSRMN--VKK-------LYSEVFVVGGYKWRVLIFPKGNNVD--YLSMYLD 103
+FTWRI+NF+R+ +KK + S+ F +G R++++P+G + +LS++L+
Sbjct: 403 GKFTWRIENFTRLKDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLE 462
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDP 163
V DS + WS + L+VVNQ + +V K++Q++++ DWG+ F+ L L+D
Sbjct: 463 VTDSRS-SSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 521
Query: 164 SRGYLLNDTLVVEAEVLV 181
G+L+ DT+V AEVL+
Sbjct: 522 DSGFLVQDTVVFSAEVLI 539
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 48 PVEEPPQSRFTWRIDNFS----RMNVKKLYSEVFVVGGYKWRVLIFPKG-NNVDYLSMYL 102
P+ + +FTW+++NFS + +K+ S VF G R+ ++ N+ +Y+SM L
Sbjct: 229 PMPDVLSGKFTWKVNNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYISMCL 288
Query: 103 DVADS-TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE-----SDWGFTSFMP 156
+ ++ L S + F ++ +NQ + +D+ +F A + G+ +M
Sbjct: 289 ESKETEKTLVSDRSCWCLFRMSALNQKPGCTHMHRDSYGRFAADNKSGDNTSLGWNDYMK 348
Query: 157 LGELYDPSRGYLLNDTLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGAT 207
+ E +P G+LL+D V V + +T K G +G +N
Sbjct: 349 MSEFVNPEAGFLLDDMAVFSTSFHVIKEFSSFT----KNGGLIGGRNGAGA 395
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 54 QSRFTWRIDNFSR----MNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTN 109
+S FTW+++NF M +K++S+ F GG + R+ ++ + D + +YL+ S
Sbjct: 567 KSSFTWKVENFLAFKEIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQSAG 623
Query: 110 LPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLL 169
+ + ++ + ++NQ +V K++ + + FM + ++ + G+L+
Sbjct: 624 TDVDNNFWVKYKMGILNQKNPAKSVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLV 681
Query: 170 NDTLVVEAEVL 180
DT+V E+L
Sbjct: 682 RDTVVFVCEIL 692
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSTNLPYGW 114
+FTW I NFS + K + S+ FV+GG KW F KG N +YLS++L VA S LP GW
Sbjct: 5 KFTWVIKNFSSLQSKYINSDKFVIGGCKW----FLKGYQNANYLSLFLMVATSKTLPCGW 60
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND--T 172
RY +F L VVNQ+ ++ + +++T+ F+ G + L +L G+L+N+
Sbjct: 61 RRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGFLVNNEVK 120
Query: 173 LVVEAEVL 180
+VVE +VL
Sbjct: 121 IVVEVDVL 128
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 12/143 (8%)
Query: 48 PVEEPPQSRFTWRIDNFSRMNVKKLY-SEVFVVGGYKWRVLIFPKG----------NNVD 96
+ P +F W I NFS + ++ Y S+ ++ WR+ +P+G NN D
Sbjct: 3 SIMNPCDKKFVWVIKNFSSLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGD 62
Query: 97 YLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMP 156
+LS+YL+V D +LP GW +Y QF VVNQI +V+++ + F+ + +WG+ +
Sbjct: 63 HLSLYLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMIS 121
Query: 157 LGELYDPSRGYLLNDTLVVEAEV 179
L +L D + G+++N L++ AEV
Sbjct: 122 LTKLNDINSGFVVNGELMIVAEV 144
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
Query: 58 TWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGWSR 116
TW+I FS+++ ++ S VF +GGY W +L++P+G +V ++LS++L VA+ L GWS+
Sbjct: 22 TWKIKKFSQISKREFASSVFEIGGYSWHILMYPEGCDVSNHLSLFLCVANHDELLPGWSQ 81
Query: 117 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND-TLVV 175
AQF+++V+++ K DT H+F +E DWG+ FM L +L D G++ + L +
Sbjct: 82 LAQFTISVMHKDPKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLRD---GFIDDSGCLTI 137
Query: 176 EAEVLVRR 183
E +V V R
Sbjct: 138 ETKVQVIR 145
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGN-NVDYLSMYLDVADSTNLPYGW 114
+FTW I NFS + + + S++FV+GG KW +L +P G N YLS+YLD LP G
Sbjct: 5 KFTWVIKNFSSLQSEYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPTLKTLPCGC 64
Query: 115 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLV 174
R +F L VVNQ+ + R + + F+ + G+ + L +L G+L+N+ +
Sbjct: 65 RRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGGFLVNNEVK 124
Query: 175 VEAEVLVRRIV 185
+ AEV V ++
Sbjct: 125 IVAEVDVLEVI 135
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 87/142 (61%), Gaps = 15/142 (10%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTN----- 109
++TW+I FS + ++ S VF GGYKW +LI+P+G +V ++LS++L VA+
Sbjct: 69 QYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGS 128
Query: 110 ---LPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRG 166
L GWS++AQF+++V++Q K DT H+F +E DWG+ FM L +L D G
Sbjct: 129 FAILEAGWSQFAQFTISVLSQDLKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLKD---G 184
Query: 167 YL-LNDTLVVEAEV-LVRRIVD 186
++ + L +EA+V ++R VD
Sbjct: 185 FIDESGCLTIEAKVQVIRERVD 206
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 89/144 (61%), Gaps = 7/144 (4%)
Query: 47 QPVEEPPQSRFTWRIDNFSRMN---VKKLYSEVFVVGGYKWRVLIFPKGNNV----DYLS 99
+ + + P + + +I++FS + +++ +E F GGYKW+++++P GN D++S
Sbjct: 12 KSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVS 71
Query: 100 MYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGE 159
+YL +ADS++L GW YA F L +++Q ++ Y + + + +F++ + +WGF F+P G
Sbjct: 72 VYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIPTGT 131
Query: 160 LYDPSRGYLLNDTLVVEAEVLVRR 183
D S GYL+ DT + A+V V +
Sbjct: 132 FSDASNGYLMEDTCMFGADVFVSK 155
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG---NNVDYLSMYLDVA 105
+++ S+ W+I+NFS+++ + S F G KW++ +P G +LS+YL +
Sbjct: 168 IKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLV 227
Query: 106 DSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSR 165
D + G + +F++ + +Q+Q ++ K T+ F+ S+ G+ ++ + P+
Sbjct: 228 DPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTK-WFSRSSSEHGWVKYVSMVYFTQPNS 286
Query: 166 GYLLNDTLVVEAEVLVRRIV 185
G LL D +VEA+V V I
Sbjct: 287 GLLLKDVCLVEADVCVHGIT 306
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG--NNVD-YLSMYLDVADSTNL 110
+ R TW I NFS + +Y ++FVVG KW +L +PKG ++++ LS++L V D +L
Sbjct: 6 EKRITWTIKNFSSLQSHAIYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVPDPDDL 65
Query: 111 PYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLN 170
P GW R+ + L VVNQ+ K + ++ + F R +G +PL ELY G+L++
Sbjct: 66 PSGWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTELYG---GFLVS 122
Query: 171 DTLVVEAEVLVRRIV 185
+ + AEV V +V
Sbjct: 123 GQVKIVAEVGVLEVV 137
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 11/137 (8%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPY 112
++ F+W I +FS + V+ +YS+ FV+GG KWR++ +P GN + Y+S+Y++VADS +LP
Sbjct: 10 KNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSKHLPS 69
Query: 113 GWSRYAQFSLAVVNQ-----IQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
GWS + + VVN Q KY RK+ F+ + WG+ + + +L G+
Sbjct: 70 GWSINTELRMEVVNHNLYKPSQQKY--RKNL--WFDQKTPSWGYKTMIRHSKL-SGEEGF 124
Query: 168 LLNDTLVVEAEVLVRRI 184
L++ + + ++ V R+
Sbjct: 125 LVSGEVTIVVKIDVYRV 141
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 11/137 (8%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPY 112
++ F+W I +FS + V+ +YS+ FV+GG KWR++ +P GN + Y+S+Y++VADS +LP
Sbjct: 10 KNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSKHLPS 69
Query: 113 GWSRYAQFSLAVVNQ-----IQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
GWS + + VVN Q KY RK+ F+ + WG+ + + +L G+
Sbjct: 70 GWSINTELRMEVVNHNLYKPSQQKY--RKNL--WFDQKTPSWGYKTMIRHSKL-SGEEGF 124
Query: 168 LLNDTLVVEAEVLVRRI 184
L++ + + ++ V R+
Sbjct: 125 LVSGEVTIVVKIDVYRV 141
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 90/157 (57%), Gaps = 15/157 (9%)
Query: 36 AQPEAAPTVESQPVEEPPQ--SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGN 93
++ E+ E V+ P + + W +++F+R+ K L+S+ F VGGY R+L++P+G+
Sbjct: 25 SRDESGGAQEIVAVDRPGEYTALCRWTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGD 84
Query: 94 NV---DYLSMYLDVADSTNLPYG-----WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNAR 145
+ +S+YL + D P G W +A + L+++N + + T+RK++ H+F+ +
Sbjct: 85 SQALPGSISIYLQIID----PRGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNK 140
Query: 146 ESDWGFTSFMPLGELYDPSRGYLL-NDTLVVEAEVLV 181
+ G+ F + DP G+L ND+L++ A++++
Sbjct: 141 KRSHGWCDFTLNSSVLDPKMGFLFNNDSLLITADIMI 177
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 56 RFTWRIDNFSRM-------NVKKLY--SEVFVVGGYKWRVLIFPKGNNV--DYLSMYLDV 104
+F+WRI+NF+ + + LY S+ F +G R++++P+G + +LS++L+V
Sbjct: 359 KFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLEV 418
Query: 105 ADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPS 164
DS + WS + L+VVNQ + +V K++Q++F+ E DWG+ F+ L L+D
Sbjct: 419 TDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQD 478
Query: 165 RGYLLNDTLVVEAEVLVRR 183
G+L+ D++V EVL+ +
Sbjct: 479 SGFLVQDSVVFSVEVLMLK 497
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 57 FTWRIDNFSR----MNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADS-TNL 110
FTW ++NFS + +K+ S VFV G R+ ++ N +Y SM LD D+ ++
Sbjct: 205 FTWTVENFSMFKEMIKTQKITSPVFVAGECFLRIGVYQSVVNAQEYFSMCLDSTDTEKSV 264
Query: 111 PYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE-----SDWGFTSFMPLGELYDPSR 165
S + FS++ +NQ + K++ +F A + G+ +M + + +P
Sbjct: 265 LSDKSSWCLFSMSALNQKHGCTNMNKESYGRFAADNKSGDNTGLGWNDYMKMSDFVNPDA 324
Query: 166 GYLLNDTLVVEAEVLVRRIVDYWTYDSKKETGYVG 200
GYLL+D V V + +T + GY+G
Sbjct: 325 GYLLDDKAVFSTSFDVIKEFSSFTKNGTGN-GYMG 358
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 36 AQPEAAPTVESQPVEEPPQSRFTWRIDNF----SRMNVKKLYSEVFVVGGYKWRVLIFPK 91
+ E+A +V +++ +S FTW+++NF M +K++S+ F GG + R+ ++
Sbjct: 506 TEAESASSV--SQIDKTVKSSFTWKVENFLAFKGIMEKRKIFSKFFQAGGCELRIGVYE- 562
Query: 92 GNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGF 151
+ D + +YL+ S + + ++ + ++NQ +V K++ + +
Sbjct: 563 --SFDTICIYLESGQSAGNDVDNNLWVKYKMGILNQKNPAKSVWKESS--LCTKTWNNSV 618
Query: 152 TSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
FM + ++ + G+L+ DTLV E+L
Sbjct: 619 LLFMKVSDMLEADAGFLVRDTLVFVCEIL 647
>AT3G58440.1 | Symbols: | TRAF-like superfamily protein |
chr3:21618446-21621249 REVERSE LENGTH=601
Length = 601
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD-YLSMYLDVADSTNLPY 112
Q +FTW ++ FS + + YS VF V G WR+L F KG D Y S+YLD+ + +LP
Sbjct: 8 QDKFTWVLEKFSSLK-DQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLDL-EPGSLPP 65
Query: 113 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
GW R +FS+ + N N V F+A+ + WGF F+ L +L + + G+L+ND
Sbjct: 66 GWRREVKFSITLDNVCPNTDRVLGGPCF-FDAKSNIWGFQDFLLLEKLVNIAEGFLVNDR 124
Query: 173 LVVEAEVLV 181
L + AEV V
Sbjct: 125 LTIVAEVDV 133
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
Query: 74 SEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKY 132
S VF GGYKW +LI+P+G +V ++LS++L VA+ L GWS++AQF+++V++Q K
Sbjct: 68 SNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGWSQFAQFTISVLSQDLKKS 127
Query: 133 TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL-LNDTLVVEAEV-LVRRIVD 186
DT H+F +E DWG+ FM L +L D G++ + L +EA+V ++R VD
Sbjct: 128 KF-SDTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAKVQVIRERVD 179
>AT2G32870.1 | Symbols: | TRAF-like family protein |
chr2:13944968-13946776 REVERSE LENGTH=416
Length = 416
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 28/196 (14%)
Query: 18 LVPHTDLPE--------------NNHQP-MEVVAQPEAAPTVESQPVEE--PPQSRFTWR 60
+ HTDL E ++ QP V P T E + E P SRFTW+
Sbjct: 222 FISHTDLKERFLVNDKAGFYAEISDVQPNFPVTRIPRTMGTAERFKLIEFSPKNSRFTWK 281
Query: 61 IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN---VDYLSMYLDVAD-STNLPYGWSR 116
I FS + ++ S F VG +W+++++PKGN + LS+YL +D TN P G +
Sbjct: 282 ITQFSSFDGEEHSSYEFTVGPRRWKLVMYPKGNGDGKGNSLSLYLFASDYVTNGPKGGT- 340
Query: 117 YAQFSLAVVNQIQNKYTVRKDTQHQF-----NARESDWGFTSFMPLGELYDPSRGYLLND 171
A + L V++Q+ N+ + ++ F N +S WG F+PL EL+ SRG+L+ND
Sbjct: 341 LAIYKLRVLDQL-NRNHCETECRYWFPYNPVNQMDSLWGRPKFLPLEELHKSSRGFLVND 399
Query: 172 TLVVEAEVLVRRIVDY 187
+ + E+ + +Y
Sbjct: 400 QIYIGVEISIVSTTEY 415
>AT2G32880.1 | Symbols: | TRAF-like family protein |
chr2:13948953-13950505 REVERSE LENGTH=318
Length = 318
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 34 VVAQPEAAPTVESQPVEEPPQ--SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPK 91
V P T E + E + SRFTW+I FS N ++ S F VG +W+++++P+
Sbjct: 154 VTGIPRTMGTAERFKLIEVARNNSRFTWKITKFSSFNGEEHSSYEFTVGPRRWKLVMYPR 213
Query: 92 GNN---VDYLSMYLDVAD--STNLPYGWSRYAQFSLAVVNQI-QNKYTVRKDTQHQF--- 142
G + LS+YL+ ++ + N P G +A + L V++Q+ +N + + D Q F
Sbjct: 214 GTGDGKGNSLSLYLNASNYVTNNGPKG-RTFAVYKLRVLDQLHRNHFEI--DCQDWFLYD 270
Query: 143 --NARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIVDY 187
+ R WG T F+PL EL+ SRG+L+ND + + E L+ +Y
Sbjct: 271 PVHPRLCSWGRTKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTTEY 317
>AT3G58240.1 | Symbols: | TRAF-like superfamily protein |
chr3:21568530-21569827 REVERSE LENGTH=317
Length = 317
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 52 PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNL 110
P ++FTW I NF ++ K +YS+ F++GG KW +L + K + +L + L++ D L
Sbjct: 4 PVDNKFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFL 63
Query: 111 PYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLN 170
P W + + S VVN K + + +H FN +E G S L EL D G+L++
Sbjct: 64 PSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKG-GSLFHLSELTDKKSGFLVD 122
Query: 171 DTLVVEAEVLV 181
+ + A++ V
Sbjct: 123 GEVEIVAQITV 133
>AT2G42460.2 | Symbols: | TRAF-like family protein |
chr2:17678018-17679247 REVERSE LENGTH=299
Length = 299
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPY 112
Q FTW+I+NFS + S VF GG + VLI PKG+ DYLS+YL V + +L
Sbjct: 7 QKTFTWKIENFSGRKFP-ITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQP 65
Query: 113 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
GW R A V+NQ + + F WGF + +PL +L D R L N+T
Sbjct: 66 GWKRRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNT 123
Query: 173 LVVEAEVLVRRIV 185
L +E + V +V
Sbjct: 124 LFIEVYIKVTEVV 136
>AT2G42460.1 | Symbols: | TRAF-like family protein |
chr2:17676399-17679247 REVERSE LENGTH=442
Length = 442
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 54 QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSTNLPY 112
Q FTW+I+NFS + S VF GG + VLI PKG+ DYLS+YL V + +L
Sbjct: 7 QKTFTWKIENFSGRKFP-ITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQP 65
Query: 113 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDT 172
GW R A V+NQ + + F WGF + +PL +L D R L N+T
Sbjct: 66 GWKRRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNT 123
Query: 173 LVVEAEVLVRRIV 185
L +E + V +V
Sbjct: 124 LFIEVYIKVTEVV 136
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 125/320 (39%), Gaps = 35/320 (10%)
Query: 188 WTYDSKKETGY-VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMPAGSI 242
W Y + TG GL N G TC++ S+LQ H I R +Y P + +
Sbjct: 151 WWYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVM 210
Query: 243 PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQH--DVQELNRVLCEKLE------ 294
+ L+ S + + + + D + H D E + +KLE
Sbjct: 211 QALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDP 270
Query: 295 DKMKGTVVE---GTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFD 351
G+V + +F G M+ + C N + S E L+++ + ++ + +
Sbjct: 271 KNQLGSVSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALE 330
Query: 352 KYVEVEPLEGDNKYHAEQYGLQDAKKGVL------FIDFPPVLQLQLKRFEYDFMRDTMV 405
+ VE LE +Q + K+ V F PPV LKRF D + TM
Sbjct: 331 SFTCVEKLE-------DQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGV--TME 381
Query: 406 KINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLS 465
KI D EFPLELDL ++S + D V Y +Y+ +
Sbjct: 382 KIFDHIEFPLELDL----SPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAP 437
Query: 466 DQWYKFDDERVTKEDTKRAL 485
+ W+ FDD +VT+ +R L
Sbjct: 438 ETWHNFDDSKVTRISEERVL 457
>AT4G09780.1 | Symbols: | TRAF-like family protein |
chr4:6159538-6161378 REVERSE LENGTH=427
Length = 427
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKKL-YSEVFVVGGYKWRVLIFPKGNN-VDYLSMYLDVADS 107
+ PP ++FTW+I +FS++ KK YS+ FVVG KWR+ I PKG+ V LS+Y+ +
Sbjct: 208 QNPPTNKFTWKISDFSKLGDKKYHYSDEFVVGERKWRIKISPKGDKKVRALSVYVQAMEY 267
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQH---------QFNARESD--WGFTSFMP 156
+ YA+ L ++NQ + ++ T F +RE + +G + +
Sbjct: 268 LPNAVASTTYAKLKLQLMNQKNTNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGTSELIS 327
Query: 157 LGELYDPSRGYLLNDTLVVEAEVLV 181
+ +L D S+GYL+ DT+V+E +L
Sbjct: 328 VEDLNDESKGYLVEDTIVLETTLLC 352
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 38/268 (14%)
Query: 198 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAGSIPLALQSLFYKL--QY 255
Y G +N G TCY NS+LQ LY FR+ + ++ L LF ++ Q
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQK 81
Query: 256 SDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL--------------- 289
T V EL +S+ F+ + + EL +L
Sbjct: 82 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSS 141
Query: 290 -CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 340
EK+ + +K + G + K+F+G N C+ + + R E+F DL LD+
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 341 KGCHDVYASFDKYVEVEPLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 399
+ + + + E L ++K+ ++ LQ+A+K + P +L + LKRF+Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 400 MRDTMVKINDRYEFPLELDLDRDDGKYL 427
K++ R FPLEL L +Y+
Sbjct: 262 QLGRYKKLSYRVVFPLELKLSNTVDEYV 289
>AT4G09770.2 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKK-LYSEVFVVGGYKWRVLIFPKGN-NVDYLSMYLDVADS 107
+ PP+++FTW+I +FS + K+ YS+ FVVG KWR+ I PKG+ V LS+Y+
Sbjct: 154 QNPPENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMAY 213
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-GFTSFMPLGELYDPSRG 166
S YA+ L ++NQ +N + K H ++ D G + + + +L D S+G
Sbjct: 214 LPNAVASSTYAKLRLRLLNQ-KNSNHIEKRVFHFYSRENGDGSGISELISVEDLNDESKG 272
Query: 167 YLLNDTLVVEAEVLVRRIVDYWTYDSK 193
YL+ D++V+E +L W D+K
Sbjct: 273 YLVEDSIVLETTLL-------WVSDTK 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 50 EEPPQSRFTWRIDNFS--RMNVKKLYSEVFVVGGYKWRVLIFPKG----NNVDYLSMYLD 103
EE P S + ++ FS + + + S F VGG+KWR++ +P G D++S+Y
Sbjct: 6 EEAPSS-YLMKLVGFSEVKFSHQPYESADFDVGGHKWRLIFYPAGKLEEGGKDHVSIY-- 62
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKD-TQHQFNARESDWGFTSFMPLGELYD 162
A N+ A+ + N +Y+V +D T +N + + GF + + D
Sbjct: 63 -ARIENVGASMQIDAELKFFIYNHNNKQYSVFQDGTMKHYNKEKKECGFAQMLLFSKFND 121
Query: 163 PSRGYLLNDTLVVEAEVLV 181
P GY+ + +V E+ V
Sbjct: 122 PKNGYIDGNACIVGVEIFV 140
>AT4G09770.1 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKK-LYSEVFVVGGYKWRVLIFPKGN-NVDYLSMYLDVADS 107
+ PP+++FTW+I +FS + K+ YS+ FVVG KWR+ I PKG+ V LS+Y+
Sbjct: 154 QNPPENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMAY 213
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-GFTSFMPLGELYDPSRG 166
S YA+ L ++NQ +N + K H ++ D G + + + +L D S+G
Sbjct: 214 LPNAVASSTYAKLRLRLLNQ-KNSNHIEKRVFHFYSRENGDGSGISELISVEDLNDESKG 272
Query: 167 YLLNDTLVVEAEVLVRRIVDYWTYDSK 193
YL+ D++V+E +L W D+K
Sbjct: 273 YLVEDSIVLETTLL-------WVSDTK 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 50 EEPPQSRFTWRIDNFS--RMNVKKLYSEVFVVGGYKWRVLIFPKG----NNVDYLSMYLD 103
EE P S + ++ FS + + + S F VGG+KWR++ +P G D++S+Y
Sbjct: 6 EEAPSS-YLMKLVGFSEVKFSHQPYESADFDVGGHKWRLIFYPAGKLEEGGKDHVSIY-- 62
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKD-TQHQFNARESDWGFTSFMPLGELYD 162
A N+ A+ + N +Y+V +D T +N + + GF + + D
Sbjct: 63 -ARIENVGASMQIDAELKFFIYNHNNKQYSVFQDGTMKHYNKEKKECGFAQMLLFSKFND 121
Query: 163 PSRGYLLNDTLVVEAEVLV 181
P GY+ + +V E+ V
Sbjct: 122 PKNGYIDGNACIVGVEIFV 140
>AT2G42480.1 | Symbols: | TRAF-like family protein |
chr2:17685805-17689851 REVERSE LENGTH=743
Length = 743
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 57 FTWRIDNFS-RMNVKKLYSEVFVVGGYKWRVLIFPKGN--NVDYLSMYLDVADSTNLPYG 113
F + IDNFS + +V + S+ FV GG +W + ++PKG N D++S+YL VA+S +L G
Sbjct: 8 FRFEIDNFSEKKDV--IASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVANSKSLGSG 65
Query: 114 WSRYAQFSLAVVNQIQNKYTVRKDTQHQ---FNARESDWGFTSFMPLGELYDPSRGYLLN 170
W R A+F +V+N+ +K R + F + WG +PL + + +G+L
Sbjct: 66 WKRSAKFYFSVLNE-SDKELYRSTISQEFCLFCVQALAWGIRKALPLSKFEE--KGFLEK 122
Query: 171 DTLVVEA 177
D L+VE
Sbjct: 123 DKLIVEV 129
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFP-KGNNVDYLSMYLDVADS 107
+E ++ FT+ I+NFS ++S +F+ G W V ++P K NN D++S+YL VA+
Sbjct: 385 MENHQKTSFTFEIENFSERKYL-IWSPIFISGQCHWFVKVYPIKDNNYDHVSVYLHVANP 443
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
+L GW R A FSL + NQ + + D+ F E + +P +L + G+
Sbjct: 444 QSLRPGWKRRAHFSLILSNQSGKEVKIPSDSCDLF-CTELSSSYPKILPPIKLKEE--GF 500
Query: 168 LLNDTLVV 175
L ND L++
Sbjct: 501 LENDKLII 508
>AT5G26320.1 | Symbols: | TRAF-like family protein |
chr5:9238310-9241236 FORWARD LENGTH=352
Length = 352
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKK--LYSEVFVVGGYKWRVLIFPKGNNVD------YLSMY 101
EE P S+ I +FS + + S F GYKWR ++F GN D +++Y
Sbjct: 56 EERPSSKIV-TITSFSVIKGRSEAFESSTFEAAGYKWRFMLFVNGNQNDPDGGHENMALY 114
Query: 102 LDVADSTNLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFTSFMPLGEL 160
+ + ++ + P GW L V N+ +KY TV T ++ A ++ WGF + +P L
Sbjct: 115 VGIKETESFPRGWEVNVDLKLFVHNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLIPRTTL 174
Query: 161 YDPSRGYLLNDTLVVEAEVLV 181
DP+ GY+L+DTL AE+ +
Sbjct: 175 LDPNEGYILHDTLSFGAEISI 195
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 18 LVPHTDLPENN-----HQPMEVVAQPEAAPTVESQP----VEEPPQSRFTWRIDNFSRMN 68
L+P T L + N H + A+ E Q + PP + FTW+I FS +
Sbjct: 168 LIPRTTLLDPNEGYILHDTLSFGAEISIVNPAEKQEKITFISNPPDNVFTWKILRFSTLE 227
Query: 69 VKKLYSEVFVVGGYKWRVLIFPKGNNVD---YLSMYLDVADSTNLPYGWSRYAQFSLAVV 125
K YS+ F+VG WR+ PKG + LS++L + + +L +
Sbjct: 228 NKFYYSDEFLVGDRYWRLGFNPKGYQGERPRALSIFLYAQGYKANAVITNTWGSVNLQLK 287
Query: 126 NQIQNKYTVRKDTQHQFNARESDWGF--TSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
NQ + + + + A S +G S + L +L + S+GYL+ND ++ EAE++
Sbjct: 288 NQRSSNHI--QLYSEAWCAIRSGYGIEGNSIILLEDLQNSSKGYLVNDAIIFEAELV 342
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 139/340 (40%), Gaps = 53/340 (15%)
Query: 198 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG--SIPLALQSLFYKL-- 253
Y G +N G TCY NS+LQ LY FR+ + T+ + ++ L LF ++
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISS 81
Query: 254 QYSDTSV-ATKELTKSFGW--DTYDSFMQHDVQE-LNRVLCEK---LEDKMKGTVVE--- 303
Q T V A K + + + S+M D E LN +L E LE + K T E
Sbjct: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHET 141
Query: 304 -------------------GTIQK---------LFEGHHMNYIECINVDYKSTRKESFYD 335
G + K +F+G N C+ + + R E+F D
Sbjct: 142 SSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLD 201
Query: 336 LQLDVKGCHDVYASFDKYVEVEPLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKR 394
L LD++ + + + E L ++K+ ++ LQ+A+K + P +L + LKR
Sbjct: 202 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 395 FEYDFMRDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXX 454
F+Y K++ R FPLEL L + P AD Y+
Sbjct: 262 FKYIEQLGRYKKLSYRVVFPLELKLSNT----VEPYADVE----YSLFAVVVHVGSGPNH 313
Query: 455 XYYAFIRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEE 494
+Y + + + W FDDE V + + A++ +G +E
Sbjct: 314 GHYVSLVKS-HNHWLFFDDENVEMIE-ESAVQTFFGSSQE 351
>AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:11394675-11395871 REVERSE LENGTH=306
Length = 306
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 55 SRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADST--NLP 111
++FTW I N +N L+S FV+GG WRV+ K NN + LS+ L VA+ + +
Sbjct: 7 NKFTWVIKNVPTLNSDMLFSNYFVIGGCSWRVVAHSKENNFKESLSLTLIVAEDSAQKMG 66
Query: 112 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND 171
GWSRYA+ +VNQI + R +T F+ + S + + +G+ + G+++N
Sbjct: 67 CGWSRYAKIIFTLVNQISEILSQRIET--MFDQKSSVFSSETMFSIGKFDEHFAGFIVNG 124
Query: 172 TLVVEAEVL 180
+ + E L
Sbjct: 125 EIKIVVEFL 133
>AT5G26280.1 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=350
Length = 350
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 50 EEPPQSRFTWRIDNFSRMNVK--KLYSEVFVVGGYKWRVLIFPKGNNVD----YLSMYLD 103
EE P S+ I +FS + + S VF GYKWR++++ GN D ++S+Y
Sbjct: 56 EERPSSKIV-TITSFSVIKGRGEPYESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYAR 114
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFTSFMPLGELYD 162
+ ++ +LP GW L V N +KY TV ++N + +WGF +P Y+
Sbjct: 115 IEETNSLPLGWEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYN 174
Query: 163 PSRGYLLNDTLVVEAEVLV 181
+ GYL DT AE+ +
Sbjct: 175 ANEGYLDQDTGSFGAEIFI 193
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 21/144 (14%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADST 108
+ PP + FTW+I FS + K YS+ F+V WR+ PKG+
Sbjct: 206 ISNPPNNVFTWKILRFSTLEDKFYYSDDFLVEDRYWRLGFNPKGDG---------GGRPH 256
Query: 109 NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFMP 156
LP + AV +R Q N R+ + W G + +
Sbjct: 257 ALPIFLFAQGHKANAVATNTWGAVNLRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIIL 316
Query: 157 LGELYDPSRGYLLNDTLVVEAEVL 180
L +L D S+GYL+ND ++ EAE++
Sbjct: 317 LADLNDASKGYLVNDAIIFEAEMV 340
>AT4G01390.1 | Symbols: | TRAF-like family protein |
chr4:570242-571595 REVERSE LENGTH=300
Length = 300
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 37 QPEAAPTVES-QPVEEPPQSRFTWRIDNFSRMNVKKLY-SEVFVVGGYKWRVLIFPKGNN 94
+P T ES +E+P R TW + FS N ++ S FVVG KWR+ + P+G+
Sbjct: 147 EPAKPGTAESFSLIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKWRIKVHPRGSM 206
Query: 95 VD---YLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESD-WG 150
+ S+YL N YA+F L V++Q+ + V K A D G
Sbjct: 207 GEKDKSFSVYLSALGFVNNAPKTKTYARFKLRVLDQVSRNH-VEKTISGWLGAEPDDRHG 265
Query: 151 FTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIVDY 187
F FMPLGEL DP YL+ D L V + V + +Y
Sbjct: 266 FADFMPLGELDDP---YLVKDKLYVGVDFDVISVSNY 299
>AT3G58400.1 | Symbols: | TRAF-like family protein |
chr3:21602667-21604063 REVERSE LENGTH=316
Length = 316
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 93 NNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFT 152
N + YLS+YL+VAD+ +LP+GW R+A+++L +VNQ K + Q F+ WG
Sbjct: 64 NFIGYLSLYLEVADNGSLPFGWRRHARYTLTLVNQNSKKSFQPNEVQEWFD-DSIKWGCP 122
Query: 153 SFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIV 185
S PL E++ G+L+N L + AE+ + ++
Sbjct: 123 SMFPLNEIHAKDSGFLVNGELKIVAEIDILEVI 155
>AT5G26260.1 | Symbols: | TRAF-like family protein |
chr5:9200492-9202153 FORWARD LENGTH=351
Length = 351
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S +F GYKWR++++ PKG +++S+Y + ++ LP GW L V N+
Sbjct: 82 SSIFEAAGYKWRLVLYVKGNPKGGINNHISLYARIEETETLPRGWEVNVDLKLFVHNRKL 141
Query: 130 NKY-TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLV 181
KY +V T ++N + +WGFT + L Y+ + GYL+ DT AE+ +
Sbjct: 142 KKYLSVTDGTVKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFI 194
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 31/149 (20%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD---YLSMYLDVA 105
+ PP + FTW+I FS + K YS+ F+VG WR+ PKG+ L ++L
Sbjct: 207 ISNPPDNVFTWKILRFSTLEDKFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIFL--- 263
Query: 106 DSTNLPYGWSRYAQF--SLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GF 151
YAQ + AVV +R Q N ++ + W G
Sbjct: 264 -----------YAQGHKANAVVTNTWGAVNLRLKNQRSSNHKQLYSAAWYPIRSDYGVGV 312
Query: 152 TSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
+ + + EL D S+GY++ND ++ EAE++
Sbjct: 313 NNIILMSELKDASKGYMVNDAIIFEAEMV 341
>AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein |
chr1:21612394-21614089 REVERSE LENGTH=396
Length = 396
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 57 FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKG---NNVDYLSMYLDVADSTNLPYG 113
F WR+ FS + S+ F GG W + ++P G + LS+YL ++D +N
Sbjct: 254 FEWRLTKFSTRFLDSYTSDSFSSGGRNWALKVYPNGVGNATGNSLSLYL-LSDQSND--- 309
Query: 114 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTL 173
Y + L V++QIQ+ K NA E+ WGF F+ ++ + S+G+L+NDTL
Sbjct: 310 -KGYVEAKLRVIDQIQSN-NFEKKVAAWPNATENGWGFDRFLSFADIKNTSKGFLVNDTL 367
Query: 174 VVEAEVLVRRIVDYWTYDSK 193
+E ++L DY+++ S
Sbjct: 368 KLEVQILSFSKTDYYSHQSS 387
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 13 EDEEMLVPHT-DLPENNHQPMEVVAQP----EAAPTVESQPVEEPPQSRFTWRIDNFSRM 67
E+ M V ++ +LP + +P + + + V + PP S + + +F M
Sbjct: 49 EEGFMAVGNSGNLPCGSSKPSSASVRAHDEQKLSQAVTTDTRTRPPNS-YCVKFQSFVTM 107
Query: 68 ------NVKKLYSEVFVVGGYKWRVLIFP----KGNNVDYLSMYLDVADSTNLPYGWSRY 117
N K S F VGGY W +LI+P ++ Y+S+Y+ V +S+ + Y
Sbjct: 108 AKQVKENGGKYESRPFSVGGYNWTLLIYPVIYIPTDSGGYVSIYVRVDNSSLITNPKDVY 167
Query: 118 AQFSLAVVNQIQNKYTVRKDTQHQ-FNARESDWGFTSFMPLGELYDPSRGYLL-NDTLVV 175
A+ + +KY + ++T+ Q F+ + WG F+P+ +P+ GY +++V
Sbjct: 168 AEITFLAYKSSTDKYQISQETEAQRFHLFKQQWGLLQFLPIYYFENPAYGYFFEGESVVF 227
Query: 176 EAEVLVRRIVDYW 188
++ + + + W
Sbjct: 228 GVDINIVKPFENW 240
>AT3G20360.1 | Symbols: | TRAF-like family protein |
chr3:7099952-7101589 REVERSE LENGTH=363
Length = 363
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 53 PQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV---DYLSMYLDVADSTN 109
P RFTW I +S + L SE F++GG W + IF G LS+YL++
Sbjct: 220 PSPRFTWYIQGYSTLPTDYL-SEEFIIGGKSWNLRIFKNGFGAFEGKNLSLYLNLGPQEL 278
Query: 110 L---PYGWSRYAQFSLAVVNQI--QNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPS 164
L PY Y + L V NQ Q+ + + + F+ + WG+ FMPL +L + S
Sbjct: 279 LKAKPYD-KVYVRAKLRVPNQFGSQSNLVLERPLDNWFSPQTIGWGYADFMPLSDLRNSS 337
Query: 165 RGYLLNDTLVVEAEV 179
+G+L+ND LVV+ +
Sbjct: 338 KGFLVNDMLVVQVAM 352
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEV-----FVVGGYKWRVLIFPKGNNVD----YLS 99
+ E P S ++ ++++F+ + +K +Y+E F VG Y W ++++PKGN D ++S
Sbjct: 61 LRERPPSSYSLKMESFNTL-MKSVYTERYESRPFRVGRYNWTLVVYPKGNKNDNGTGHIS 119
Query: 100 MYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLG 158
+Y+ + +ST + V N+ + KY +DT +F+A + WGF+ +PL
Sbjct: 120 LYVVLDNSTLTSQSEEVHVDLRFYVFNKKETKYFTIQDTDVWRFSAIKRMWGFSKVLPLI 179
Query: 159 ELYDPSRGYL 168
+ GYL
Sbjct: 180 TFNNLKNGYL 189
>AT2G05410.1 | Symbols: | TRAF-like family protein |
chr2:1977490-1978553 FORWARD LENGTH=265
Length = 265
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 87 LIFPKGNNV--DYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNA 144
+ +PKG N D S++L+V D+ +LP GW R+A+ S ++VNQ K + RK TQH F
Sbjct: 1 MAYPKGINKAHDSFSLFLNVPDNESLPTGWRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQ 60
Query: 145 RESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIV 185
+ WGF + EL + G+L+N L V A++ V +V
Sbjct: 61 KAFTWGFPVMITHTEL-NAKMGFLVNGELKVVAKIEVLEVV 100
>AT3G58380.1 | Symbols: | TRAF-like family protein |
chr3:21597965-21599195 REVERSE LENGTH=307
Length = 307
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADST 108
+E+ +F W I + + K+ +S+ F++ G +WR+L PKG N ++ Y+ VADS
Sbjct: 1 MEKEVDKKFVWVIKDLNVFYPKQSHSDPFLIAGSRWRLLALPKGTNYEFFYQYMGVADSC 60
Query: 109 -NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
+L W R+ + L +VN I +K ++ D+ F+ + + P L G+
Sbjct: 61 QSLTSSWRRHVKLRLTIVNGISHKRSIVTDSDLYFDENLPACSYPTVPPPFNLLARDAGF 120
Query: 168 LLNDTLVVEAEVLVRRIV 185
L+ + + EV+ ++
Sbjct: 121 LICREITIVIEVVSLEVI 138
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 112/282 (39%), Gaps = 52/282 (18%)
Query: 198 YVGLKNQGATCYMNSLLQ--------------TLYHIPYFRKAVYHMPTTENDMPAGSIP 243
Y G +N G TCY NS+LQ LY FR+ + ++
Sbjct: 22 YFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLL 81
Query: 244 LALQSLFYKL--QYSDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL- 289
L LF ++ Q T V EL +S+ F+ + + EL +L
Sbjct: 82 TCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILE 141
Query: 290 ---------------CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYK 326
EK+ + +K + G + K+F+G N C+ +
Sbjct: 142 KETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETV 201
Query: 327 STRKESFYDLQLDVKGCHDVYASFDKYVEVEPLEGDNKYHAEQ-YGLQDAKKGVLFIDFP 385
+ R E+F DL LD++ + + + E L ++K+ ++ LQ+A+K + P
Sbjct: 202 TARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 386 PVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDDGKYL 427
+L + LKRF+Y K++ R FPLEL L +Y+
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV 303
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 200 GLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTEND-------------MPAGSI 242
GL N G +CY N++LQ L I Y + ++ + G
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGES 389
Query: 243 PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 302
PL+ + KLQ K L D ++ F++ V + V + E G
Sbjct: 390 PLSPIKILSKLQK-----IGKHLGPGKEEDAHE-FLRCAVDTMQSVFLK--EAPAAGPFA 441
Query: 303 EGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CHDVYASFDKYVEVEPL 359
E T + F G+ + I+C+ +KS R E DL +++ G + + ++ E L
Sbjct: 442 EETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVL 501
Query: 360 EGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 418
+G+N+Y + Q AKK ++ ++ P +L + LKRF+ D K++ FP LD
Sbjct: 502 DGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQ----SDNFGKLSKPIHFPELLD 557
Query: 419 LDRDDGKYLS-PD-ADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERV 476
+ Y+S P+ D V +LY Y +I+ TL W+K DD V
Sbjct: 558 IS----PYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIK-TLDGDWFKIDDSNV 612
>AT3G58430.1 | Symbols: | TRAF-like family protein |
chr3:21613163-21616174 REVERSE LENGTH=535
Length = 535
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADST 108
+E+ +F W I NFS + ++LYS ++G KWR + +P + Y S+ L V D
Sbjct: 1 MEKQAHKKFCWIIKNFSPQS-ERLYSVPVLIGDCKWRPIAYPIRDK--YFSLCLQVVDFE 57
Query: 109 NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGF 151
+LP GW RY + L + NQ N + H F+ + + WG
Sbjct: 58 SLPCGWGRYVELRLTLRNQ-HNSLNLSIKADHCFDEKRTTWGI 99
>AT3G58290.3 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=264
Length = 264
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 48 PVEEPPQSRFTWRIDNFSRMNVKKLY-SEVFVVGGYKWRVLIFPKG----------NNVD 96
+ P +F W I NFS + ++ Y S+ ++ WR+ +P+G NN D
Sbjct: 3 SIMNPCDKKFVWVIKNFSSLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGD 62
Query: 97 YLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRK 136
+LS+YL+V D +LP GW +Y QF VVNQI +V++
Sbjct: 63 HLSLYLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKR 101
>AT3G28220.1 | Symbols: | TRAF-like family protein |
chr3:10524420-10526497 FORWARD LENGTH=370
Length = 370
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 57 FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSTNLPYG 113
+ W + NFS + + S+ FV+GG W + ++P G+ + LS+Y+ D PY
Sbjct: 239 YKWTLPNFSSLEKQYYVSDKFVIGGRSWALKVYPSGDGEGQGNSLSLYVVAVDVK--PYD 296
Query: 114 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTL 173
Y + L ++NQ +K+ +K ++ + + WGF F+P +L D S+G L+NDTL
Sbjct: 297 -KIYLKAKLRIINQRDSKHMEKK--VESWSDQANSWGFQKFVPFADLKDTSKGLLVNDTL 353
Query: 174 VVEAE 178
+E E
Sbjct: 354 KMEIE 358
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 53 PQSRFTWRIDNFSRM----NVKKLYSEVFVVGGYKWRVLIFPKGN-----NVDYLSMYLD 103
P S + +I++F + N +K S F GGY W ++++PKGN ++Y+SMY+
Sbjct: 79 PPSTYCLKIESFIKFATSPNAEKYESRPFESGGYNWTLIVYPKGNIKEGAPLNYVSMYVQ 138
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDT-QHQFNARESDWGFTSFMPLGELYD 162
+ +ST L YA+ + N+ ++KY ++T +F + WG+ + P ++ +
Sbjct: 139 IDNSTLLNSPKEVYAEVKFFIYNRKEDKYLTYQETDAKRFFLFKPYWGYGNVRPYTDVAN 198
Query: 163 PSRGYLLN-DTLVVEAEVLVRRIVDYW 188
P+ G+L + D ++ +V V + + W
Sbjct: 199 PNAGWLFDGDNVLFGVDVFVTEVFNKW 225
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 123/312 (39%), Gaps = 43/312 (13%)
Query: 199 VGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTT--ENDMPAG-----------S 241
GL N G +C+ N + Q L P YF + + T E G
Sbjct: 542 CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKAKEEK 601
Query: 242 IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE-DKMKGT 300
PL+ L +LQ + + + F++ V + V + E D K +
Sbjct: 602 SPLSPNGLLSQLQNIGIFLGNGK------EEDAHEFLRFVVDTMQSVCIKASEYDMTKSS 655
Query: 301 VVEGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYA---SFDKYVE 355
+E T I F G+ + I+C+ KS +E DL +++ G D+ + ++
Sbjct: 656 KLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDG--DISTLDDALRRFTR 713
Query: 356 VEPLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP 414
E L+G+NKY + AKK + + P VL + LKRF+ K+N FP
Sbjct: 714 TEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAG----KFGKLNKLIRFP 769
Query: 415 LELDLDRDDGKYLSPDADRNVR-NLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDD 473
LDL Y+S ++++ LY Y +IR ++WYK DD
Sbjct: 770 ETLDL----APYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN--QNKWYKADD 823
Query: 474 ERVTKEDTKRAL 485
V D +R L
Sbjct: 824 STVVTSDVERIL 835
>AT3G20370.1 | Symbols: | TRAF-like family protein |
chr3:7105481-7107079 FORWARD LENGTH=379
Length = 379
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 47 QPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFV-----VGGYKWRVLIFPKGNNVD----Y 97
+ + + P S ++ ++++F+ + +K Y+E +V VGGY W +++FP GN D Y
Sbjct: 78 KGLRDRPPSSYSLKMESFNTL-LKSTYTEKYVSRPFSVGGYNWTLVVFPNGNKKDSGSGY 136
Query: 98 LSMYLDVADSTNLPYGWSR-YAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFM 155
LS+Y+ + +ST G YA + N+ + KY +DT +F+ ++ WGF+ +
Sbjct: 137 LSLYVAIDNST---LGQQEIYADLRFYIFNKNERKYFTIQDTDVWKFSVFKTMWGFSQVL 193
Query: 156 PLGELYDPSRGYL 168
P+ DP++GYL
Sbjct: 194 PIDTFKDPTKGYL 206
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 56 RFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD---YLSMYLDV-ADSTNLP 111
RFTW I FS + SEVF +GG W + I P G LSMYL + + P
Sbjct: 240 RFTWTIRGFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYLGLNVNEIFRP 299
Query: 112 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNA---RESDWGFTSFMPLGELYDPSRGYL 168
Y Y + L +NQ+ N + ++ +N E WGF F+ L D S+G++
Sbjct: 300 YE-KIYVRAKLRALNQL-NLSNIERELDIWYNGPGYGEYSWGFPEFIYFPYLTDSSKGFV 357
Query: 169 LNDTLVVEAEV 179
ND L+V+ E+
Sbjct: 358 KNDVLMVQVEM 368
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 132/340 (38%), Gaps = 51/340 (15%)
Query: 199 VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAGSIPL-ALQSLFYKLQYSD 257
GL+N G TC++NS+LQ L + + + AG L A+Q + ++
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQAN 166
Query: 258 TSV-ATKELTKSFGWDT--YDSFMQHDVQE--LNRVLCEKLEDKMKGTVVEGT------- 305
+ A K+L + + + + Q D E +N + C G E +
Sbjct: 167 GRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSL 226
Query: 306 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE-GDNK 364
+ K+F G + ++C + S + + F DL LD+ + + ++ VE L+ G
Sbjct: 227 VHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRFTAVELLDNGAKV 286
Query: 365 YHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDD 423
Y E+ + AKK + P VL + LKRFE KI+ + +F +D+
Sbjct: 287 YQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSE----KIDRKVDFTSAIDMK--- 339
Query: 424 GKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKEDTKR 483
++S + N++ YT +YA T S WY DD RV + K
Sbjct: 340 -PFVSGPHEGNLK--YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKT 396
Query: 484 ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRE 523
++ AYML Y+R+
Sbjct: 397 VFNQK--------------------------AYMLFYVRD 410
>AT4G00780.1 | Symbols: | TRAF-like family protein |
chr4:334779-336120 FORWARD LENGTH=299
Length = 299
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLY-SEVFVVGGYKWRVLIFPKG---NNVDYLSMYLDV 104
+E+P + TW + FS N K + S FVVG KWR+ + P+G S+YL
Sbjct: 159 IEKPLNHKVTWMMSKFSSFNPGKAHQSNEFVVGTRKWRLEVHPRGYMDEKDKSFSVYLSA 218
Query: 105 ADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-GFTSFMPLGELYDP 163
N YA+F L V++Q+ + V + F+A SD GF FMPLG+L +P
Sbjct: 219 EGFVNNAPMTKTYAKFKLRVLDQVSWNH-VEESGLSWFDAEPSDQSGFADFMPLGKLNEP 277
Query: 164 SRGYLLNDTLVVEAE 178
YL+ D L V E
Sbjct: 278 ---YLVKDKLYVGVE 289
>AT2G04190.1 | Symbols: | TRAF-like family protein |
chr2:1427594-1430230 REVERSE LENGTH=411
Length = 411
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 41 APTVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGY---KWRVLIFPKGNNVD- 96
P V +EPP R I NFS + ++ E V Y KWR++++ GN D
Sbjct: 107 GPEVTRTLRDEPPSHRIL-TITNFSEIIGREEPYESSVFEAYFEHKWRLILYVNGNQNDG 165
Query: 97 ---YLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFT 152
++S+YL ++ +L Y S L V N Q+KY TV Q ++N + +WG+
Sbjct: 166 GSNHISLYLRSEETDHLTYDGSINFVLKLFVYNGKQDKYLTVTDGIQKRYNYKNKEWGYG 225
Query: 153 SFMPLGELYDPSRGYLLNDTLVVEAEVLV 181
+PL D S+GYL DT AE+ +
Sbjct: 226 KLIPLSTFLDTSQGYLEQDTASFGAEIFL 254
>AT2G04170.5 | Symbols: | TRAF-like family protein |
chr2:1417660-1419156 REVERSE LENGTH=369
Length = 369
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GGYKWR++++ +++S+Y+ + ++ +LP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 130 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
>AT2G04170.4 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GGYKWR++++ +++S+Y+ + ++ +LP GW + L V N Q
Sbjct: 29 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 88
Query: 130 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 89 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 140
>AT2G04170.3 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GGYKWR++++ +++S+Y+ + ++ +LP GW + L V N Q
Sbjct: 29 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 88
Query: 130 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 89 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 140
>AT3G46190.1 | Symbols: | TRAF-like family protein |
chr3:16965889-16967345 FORWARD LENGTH=291
Length = 291
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 57 FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSR 116
FTW + NFS + + S+ F G W + ++P G+ V + S +
Sbjct: 163 FTWSLPNFSTLTLDSYTSDPFSSGDRNWVLKVYPNGDGVGKDNSLSLYLLSESNE---KN 219
Query: 117 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVE 176
Y + +L V+NQI + V K + NA E+ WG+ F+PL +L D ++G++++D L VE
Sbjct: 220 YVRATLRVLNQIGSD-NVEKPVEGWPNAAENGWGYQEFIPLADLQDATKGFVVDDLLEVE 278
Query: 177 AEVLV 181
E++
Sbjct: 279 VEIMA 283
>AT2G04170.2 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GGYKWR++++ +++S+Y+ + ++ +LP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 130 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
>AT2G04170.1 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 74 SEVFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GGYKWR++++ +++S+Y+ + ++ +LP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 130 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
>AT2G15710.1 | Symbols: | TRAF-like family protein |
chr2:6842648-6845103 FORWARD LENGTH=365
Length = 365
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 39 EAAPTVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD-- 96
+ T+ + E PP S ++ +I+ S++ K S F+ GGY WR++I+PKGN D
Sbjct: 84 QGDSTIVNNLREHPPSS-YSLKINKLSQLTFDKYESHRFLSGGYNWRLVIYPKGNEKDKG 142
Query: 97 --YLSMYLDVAD---STNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWG 150
++SMY++ + S+ P +A V N+ +NKY +D + +FNA + WG
Sbjct: 143 SGFISMYVEFDNTKVSSTSPM--EVFAYIIFFVYNKKENKYFTIQDVEVKRFNALRTVWG 200
Query: 151 FTSFMPLGELYDPSRGY 167
+ + L D GY
Sbjct: 201 LSQVLSLETFNDLENGY 217
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 199 VGLKNQGATCYMNSLLQTLYHIPYF------RKAVYHMPTTENDMPAGSIPLAL--QSLF 250
+GL+N G TCY+NS+LQ L P K H T + P + + +
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 251 YKLQYSDTSVATKELTKSFG--WDTYDSFMQHDVQELNRVL---CEKLEDKMKGTVVEGT 305
L T+ A +++ + + Q D E R + C ++K G
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 306 --------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVE 357
++++F G + ++C++ +S + + D+ L++ V S K+ + E
Sbjct: 144 EPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSE 203
Query: 358 PLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDF 399
L+G+NKY E L A+K + + P +L +QLKRF F
Sbjct: 204 ILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIF 246
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 119/316 (37%), Gaps = 52/316 (16%)
Query: 199 VGLKNQGATCYMNSLLQTLYH-IPYFRKAV---YHMPT----------------TENDMP 238
GL N G +C++NS+ Q H +P + Y +P E +
Sbjct: 176 AGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALR 235
Query: 239 AGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE---- 294
P+A F L Y F D + + Q D E + EKLE
Sbjct: 236 PERCPIAPYFFFDNLNY-------------FSPD-FQRYQQEDAHEFLQAFLEKLEICGS 281
Query: 295 --DKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDK 352
+G + T Q +F G ++ + C N DY S E L L+++ + ++ +
Sbjct: 282 DRTSFRGDI---TSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALES 338
Query: 353 YVEVEPLEGDNKYHAEQYGLQDAKKGVLFID-FPPVLQLQLKRFEYDFMRDTMVKINDRY 411
+ VE L D + + + +K+ L +D P V LKRF+ + + M KI
Sbjct: 339 FTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLY--MEKIYKHV 394
Query: 412 EFPLELDLDRDDGKYLSPDADRNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKF 471
+ PLE+DL Y+ + V Y +Y+ + W+ F
Sbjct: 395 KIPLEIDLQ----PYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHF 450
Query: 472 DDERVTKEDTKRALEE 487
DD +VT+ D L +
Sbjct: 451 DDSKVTRIDEDMVLSQ 466
>AT3G22080.1 | Symbols: | TRAF-like family protein |
chr3:7777818-7781718 REVERSE LENGTH=648
Length = 648
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 50 EEPPQSRFTWRIDNFSRMNVKKLYSE------VFVVGGYKWRVLIFPKGNNVD----YLS 99
E P S ++ ++ N S++ L+S+ +F GGY WR++I+PKGN D ++S
Sbjct: 350 ERTPNS-YSLKLQNISQVEKSTLFSDGKYQSRLFSSGGYNWRMIIYPKGNRKDDGSGFIS 408
Query: 100 MYLDVADSTNLPYGWSR-YAQFSLAVVNQIQNK-YTVRKDTQHQFNARESDWGFTSFMPL 157
MY+++ ++ L + +A V N+ +NK YT++ FNA + WG +P+
Sbjct: 409 MYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQHVESKLFNAFRTIWGLAQVLPV 468
Query: 158 GELYDPSRGYLL 169
DP GY+
Sbjct: 469 DTFTDPKNGYIF 480
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 40 AAPTVESQP--VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD- 96
+ +++ P + E P S ++ + +N + ++ K S +F GGY WR++I+PKGN D
Sbjct: 2 GSTVLDANPSTLREHPPSSYSIKFENIAELDDGKYESSLFAAGGYNWRLVIYPKGNAKDE 61
Query: 97 ---YLSMYLDVADSTNL 110
++SMY+++ DSTNL
Sbjct: 62 GSGFISMYVEI-DSTNL 77
>AT5G26300.1 | Symbols: | TRAF-like family protein |
chr5:9229326-9231033 FORWARD LENGTH=349
Length = 349
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 50 EEPPQSRFTWRIDNFS--RMNVKKLYSEVFVVGGYKWRVLIFPKGN----NVDYLSMYLD 103
+E P S+ I NFS + V+ S VF GYKWR++++ GN D++S+Y+
Sbjct: 56 DERPSSKIL-TITNFSVIKGRVEPYESSVFEAAGYKWRLVLYVNGNPNDSGNDHISLYVR 114
Query: 104 VADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKD-TQHQFNARESDWGFTSFMPLGELYD 162
+ ++ LP GW L + N NKY D T +N + +WGF +P Y+
Sbjct: 115 IEETEYLPRGWEVNVDLKLFIHNGKLNKYLAISDGTLKLYNDAKREWGFGQLIPHVTFYN 174
Query: 163 PSRGYLLNDTLVVEAEVLV 181
+ GY+ D AE+ +
Sbjct: 175 -TYGYIEQDIGSFGAEIFI 192
>AT1G65050.1 | Symbols: | TRAF-like superfamily protein |
chr1:24164286-24165679 REVERSE LENGTH=228
Length = 228
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 52 PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADS 107
PP S S++ K S F GG+ WR++++PKGN D ++SMY++ S
Sbjct: 18 PPSSSLV----RLSQLANDKYESPPFSSGGHNWRLVVYPKGNEADNGRGFVSMYVECLSS 73
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGELYDPSRG 166
T P Y F V ++ + +Y +D + +FN+ ++ WG + +P+ L D ++G
Sbjct: 74 TTPPIDVFVYLTF--FVFSEEEKRYLSIQDVEVKRFNSSKTVWGLSQVLPVETLKDRAKG 131
Query: 167 YLLN 170
++L+
Sbjct: 132 FILS 135
>AT5G26290.1 | Symbols: | TRAF-like family protein |
chr5:9226079-9227873 FORWARD LENGTH=333
Length = 333
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 74 SEVFVVGGYKWRVLIFPKGN----NVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
S VF GYKWR++++ GN D++S+Y + ++ +LP GW L V N
Sbjct: 74 SSVFEAVGYKWRLVLYVNGNEKDGGKDHVSLYAKIVETESLPVGWEVNVDLKLFVYNGKL 133
Query: 130 NKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRR 183
NKY + T ++N + G+ +P YD + GY DT AE+ + +
Sbjct: 134 NKYLIV--TVKRYNNATKELGYGQLIPQSTFYDGNDGYREQDTGTFGAEIYIVK 185
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADST 108
+ PP + FTW+I +FS + K S F+VG W++ + PKG V + +Y +
Sbjct: 196 ISNPPDNVFTWKILHFSTLEDKVYQSNEFLVGDRYWKLGLNPKGGLVP-IFLYAQGFKAN 254
Query: 109 NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 168
+ + YA +L + NQ + + G + +PL ++ D S+GY+
Sbjct: 255 AVVT--TTYAATNLRLKNQRSSNHVTTYTAYWYLIPSGLGLGVNT-IPLSDVKDASKGYV 311
Query: 169 LNDTLVVEAEVLVRRIVD 186
+ND++++E E+L + +
Sbjct: 312 VNDSIIIEVEMLTVSVTN 329
>AT2G42470.1 | Symbols: | TRAF-like family protein |
chr2:17679887-17685187 REVERSE LENGTH=898
Length = 898
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 27 NNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRV 86
N Q E++ ++ + +E Q+ FT+ IDNF + S +F+ GG +W +
Sbjct: 4 NIKQTCEILPSNKSLRKRLGRDMENHEQTSFTFEIDNF--LEKGDAISPIFISGGCEWFI 61
Query: 87 LIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE 146
++ D+L++ L V + +L YGW R ++S V+NQ + + + F
Sbjct: 62 RVWQIE---DHLAVTLSVPNLESLRYGWERRTKYSFIVLNQSGRELERTFEVEGLFCTEL 118
Query: 147 SDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIVDYWTYDSKKE 195
+W MP +L + L N+ L++E +V V +V ++KE
Sbjct: 119 LEWCHPKVMPTNKLQEVC---LENNKLIIEVQVKVLEVVHEGGVTTEKE 164
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 43 TVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD-YLSMY 101
T++S+ + + T + NFS+ + + S F GG W + +PKG+ D YLS++
Sbjct: 478 TLKSKQMGTQFRKALTLTVTNFSQKS-SPINSPPFPSGGCNWYIKFYPKGSADDNYLSLF 536
Query: 102 LDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARES-DWGFTSFMPLGEL 160
L D +L W R A F ++NQ + + Q+ +S WGF +P +L
Sbjct: 537 LSPDDPKSLGLNWKRRANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKL 596
Query: 161 YDPSRGYLLNDTLVVEAEVLVRRIVD 186
D + +L ND +E + V +V+
Sbjct: 597 LD--KIFLDNDRFNIEIYIKVIEVVE 620
>AT5G52330.2 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249288 REVERSE LENGTH=346
Length = 346
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 88 IFPKGNNV-DYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE 146
++P+G +V ++LS++L VA+ L GWS+ AQF+++V+++ K DT H+F +E
Sbjct: 1 MYPEGCDVSNHLSLFLCVANHDELLPGWSQLAQFTISVMHKDPKKSKF-SDTLHRFWKKE 59
Query: 147 SDWGFTSFMPLGELYDPSRGYLLND-TLVVEAEVLVRR 183
DWG+ FM L +L D G++ + L +E +V V R
Sbjct: 60 HDWGWKKFMELPKLRD---GFIDDSGCLTIETKVQVIR 94
>AT1G65150.2 | Symbols: | TRAF-like family protein |
chr1:24204167-24205558 REVERSE LENGTH=296
Length = 296
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 42 PTVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD----Y 97
P V PP S S++ +K S F G + WR+++ PKGN D +
Sbjct: 8 PAVLKTWRRNPPSSTLV----RLSQLANEKYESPPFSSGAHNWRLVVHPKGNEADNGSGF 63
Query: 98 LSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMP 156
+SMY++ ST P +A + V ++ + KY +D + +FN+ ++ WG + +P
Sbjct: 64 VSMYVECLSSTTPPI--DVFAYLTFFVFSEEEKKYLSFQDVEVKRFNSSKTVWGLSKALP 121
Query: 157 LGELYDPSRGYLL 169
+ L D ++G++L
Sbjct: 122 VETLKDRAKGFIL 134
>AT1G65150.1 | Symbols: | TRAF-like family protein |
chr1:24204167-24205558 REVERSE LENGTH=296
Length = 296
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 42 PTVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVD----Y 97
P V PP S S++ +K S F G + WR+++ PKGN D +
Sbjct: 8 PAVLKTWRRNPPSSTLV----RLSQLANEKYESPPFSSGAHNWRLVVHPKGNEADNGSGF 63
Query: 98 LSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMP 156
+SMY++ ST P +A + V ++ + KY +D + +FN+ ++ WG + +P
Sbjct: 64 VSMYVECLSSTTPPI--DVFAYLTFFVFSEEEKKYLSFQDVEVKRFNSSKTVWGLSKALP 121
Query: 157 LGELYDPSRGYLL 169
+ L D ++G++L
Sbjct: 122 VETLKDRAKGFIL 134
>AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21578617-21579537 REVERSE LENGTH=243
Length = 243
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 110 LPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLL 169
+P GW RY +F + +VN I ++V K F+ +WGF +P L + + G+LL
Sbjct: 4 IPCGWRRYVEFRMTIVNHISPIHSVDKKGWRWFDENTKNWGFKDMIPAVILNNVNVGFLL 63
Query: 170 NDTLVVEAEVLVRRIVD 186
N + + AEV V +D
Sbjct: 64 NGEITIIAEVEVHEFID 80
>AT4G16045.1 | Symbols: | TRAF-like superfamily protein |
chr4:9089906-9091860 FORWARD LENGTH=382
Length = 382
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 96 DYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFM 155
+ LS++L VA+ L GWS AQFS+AV N+ K + DT HQF +E DWG+ F+
Sbjct: 28 NCLSLFLCVANYEKLLPGWSHLAQFSVAVENKDPKKSKI-ADTLHQFWKKEHDWGWKKFI 86
Query: 156 PLGELYDPSRGYLLN-DTLVVEAEV 179
L +L D G++ D+L ++A+V
Sbjct: 87 ELPKLQD---GFIDKFDSLSLKAQV 108
>AT5G26280.2 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=327
Length = 327
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 21/144 (14%)
Query: 49 VEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADST 108
+ PP + FTW+I FS + K YS+ F+V WR+ PKG+
Sbjct: 183 ISNPPNNVFTWKILRFSTLEDKFYYSDDFLVEDRYWRLGFNPKGDG---------GGRPH 233
Query: 109 NLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFMP 156
LP + AV +R Q N R+ + W G + +
Sbjct: 234 ALPIFLFAQGHKANAVATNTWGAVNLRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIIL 293
Query: 157 LGELYDPSRGYLLNDTLVVEAEVL 180
L +L D S+GYL+ND ++ EAE++
Sbjct: 294 LADLNDASKGYLVNDAIIFEAEMV 317
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 50 EEPPQSRFTWRIDNFSRMNVK--KLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADS 107
EE P S+ I +FS + + S VF GYKW + ++
Sbjct: 56 EERPSSKIV-TITSFSVIKGRGEPYESSVFEAAGYKW-------------------IEET 95
Query: 108 TNLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRG 166
+LP GW L V N +KY TV ++N + +WGF +P Y+ + G
Sbjct: 96 NSLPLGWEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEG 155
Query: 167 YLLNDTLVVEAEVLV 181
YL DT AE+ +
Sbjct: 156 YLDQDTGSFGAEIFI 170
>AT1G69660.1 | Symbols: | TRAF-like family protein |
chr1:26199623-26200603 REVERSE LENGTH=231
Length = 231
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 52 PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADST 108
PP +F+W + NFS + S + +GG +W + ++PKGN+ YLS+Y+ +ADS
Sbjct: 94 PP--KFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKGNSRADGKYLSLYVHLADSE 151
Query: 109 NLPYGWSRYAQFSLAVVNQI-QNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGY 167
L + Q + V+N + N V+ ++ ++R WG+ F+ + L + Y
Sbjct: 152 TLKSDEKNFKQGHVRVLNPLGSNHVEVQSSCWYKESSR--GWGWDHFLSIANL---RKTY 206
Query: 168 L-LNDTLVVEAEVLVRRIVDY 187
L D L VE E V Y
Sbjct: 207 LDKEDALNVEIEFKVVSATKY 227
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 36/312 (11%)
Query: 199 VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMP-AGSIPLALQSLFY-K 252
GL N G +C+ N +LQ L + Y + + ND L Y +
Sbjct: 174 CGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSR 233
Query: 253 LQYSDTSVATK--ELTKSFGWDTYDSFMQHDVQELNRVLCEKLE----DKMKGTVV---- 302
+S ++ ++ + + G+ Q D EL R + ++ D+ G V
Sbjct: 234 FPFSPMNIISRLPNIGGNLGYG-----RQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPR 288
Query: 303 --EGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CHDVYASFDKYVEVEP 358
E T IQ +F G + ++C S + E+ DL +++ G + D++ E
Sbjct: 289 AQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEW 348
Query: 359 LEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLEL 417
L+GDN Y ++ A K + P +L + LKRF+ K+N R FP
Sbjct: 349 LQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFPETF 404
Query: 418 DLDRDDGKYLSPDAD-RNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERV 476
DL G Y+S + +V LY Y +++ WY+ DD V
Sbjct: 405 DL----GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVK-DFRGNWYRIDDSEV 459
Query: 477 TKEDTKRALEEQ 488
K + + L ++
Sbjct: 460 EKVELEDVLSQR 471
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 36/312 (11%)
Query: 199 VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMP-AGSIPLALQSLFY-K 252
GL N G +C+ N +LQ L + Y + + ND L Y +
Sbjct: 4 CGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSR 63
Query: 253 LQYSDTSVATK--ELTKSFGWDTYDSFMQHDVQELNRVLCEKLE----DKMKGTVV---- 302
+S ++ ++ + + G+ Q D EL R + ++ D+ G V
Sbjct: 64 FPFSPMNIISRLPNIGGNLGYG-----RQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPR 118
Query: 303 --EGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CHDVYASFDKYVEVEP 358
E T IQ +F G + ++C S + E+ DL +++ G + D++ E
Sbjct: 119 AQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEW 178
Query: 359 LEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLEL 417
L+GDN Y ++ A K + P +L + LKRF+ K+N R FP
Sbjct: 179 LQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFPETF 234
Query: 418 DLDRDDGKYLSPDAD-RNVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERV 476
DL G Y+S + +V LY Y +++ WY+ DD V
Sbjct: 235 DL----GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVK-DFRGNWYRIDDSEV 289
Query: 477 TKEDTKRALEEQ 488
K + + L ++
Sbjct: 290 EKVELEDVLSQR 301