Miyakogusa Predicted Gene

Lj2g3v2902400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2902400.1 Non Chatacterized Hit- tr|F6GZL7|F6GZL7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,56.98,2e-19,no
description,NULL; Nucleotide-diphospho-sugar transferases,NULL;
BETA-1,3-GLUCURONYLTRANSFERASE,NU,CUFF.39428.1
         (101 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27600.2 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar ...    83   3e-17
AT1G27600.1 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar ...    83   3e-17

>AT1G27600.2 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar
           transferases superfamily protein | chr1:9604083-9605881
           REVERSE LENGTH=394
          Length = 394

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 47/60 (78%)

Query: 28  DFVLRKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKTS 87
           +FV +KLL+VVTPTYN   Q+Y+LNR+ Q LRLV  PVLW+VVE   AS ET+E+LRKT 
Sbjct: 136 NFVPKKLLIVVTPTYNRAMQAYYLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTG 195


>AT1G27600.1 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar
           transferases superfamily protein | chr1:9604083-9605881
           REVERSE LENGTH=394
          Length = 394

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 47/60 (78%)

Query: 28  DFVLRKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKTS 87
           +FV +KLL+VVTPTYN   Q+Y+LNR+ Q LRLV  PVLW+VVE   AS ET+E+LRKT 
Sbjct: 136 NFVPKKLLIVVTPTYNRAMQAYYLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTG 195