Miyakogusa Predicted Gene
- Lj2g3v2902280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2902280.1 Non Chatacterized Hit- tr|I1KDW0|I1KDW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15153 PE,37.74,3e-18,
,CUFF.39415.1
(217 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53050.1 | Symbols: | Protein kinase superfamily protein | c... 88 5e-18
AT1G03740.1 | Symbols: | Protein kinase superfamily protein | c... 63 2e-10
AT5G44290.4 | Symbols: | Protein kinase superfamily protein | c... 54 6e-08
AT5G44290.3 | Symbols: | Protein kinase superfamily protein | c... 54 6e-08
AT5G44290.2 | Symbols: | Protein kinase superfamily protein | c... 54 6e-08
AT5G44290.1 | Symbols: | Protein kinase superfamily protein | c... 54 6e-08
AT1G09600.1 | Symbols: | Protein kinase superfamily protein | c... 50 1e-06
AT1G33770.1 | Symbols: | Protein kinase superfamily protein | c... 49 4e-06
>AT1G53050.1 | Symbols: | Protein kinase superfamily protein |
chr1:19772574-19775531 FORWARD LENGTH=694
Length = 694
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 104/210 (49%), Gaps = 26/210 (12%)
Query: 2 LQQAQRHSSSNHRSELSYPHRGPV-SGFLGVAHKQSEDVKEMGNNSSGHLF--KRPSHSG 58
+Q+ Q S++ RSE PH V SGF + S E S G++ KR SHSG
Sbjct: 485 MQKRQSQSTNRSRSEKFNPHPEEVASGFPIDPPRPSSQAFEPNRESQGNIIPHKRASHSG 544
Query: 59 PLVPGYGWAKGAKEVDDGPPVSNRVNLSKLSGLVASRTSLPEDQGEKPAHLHHRKPVEVR 118
PL AKG + D VS+ + S + G A+RT P+ ++ R P +
Sbjct: 545 PLSRRSASAKGRRNYQDSQKVSSIADYSAMPGFAATRTGAPQ---QETCRGMTRLPGSFK 601
Query: 119 KSVEATSGSESRRRHDQKRIVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLVS 178
++ E + E+ R + + I+ G GS G+KI+ SGPL+V
Sbjct: 602 ETSEEANQEENGRSNKKDPILL-----------------GYGSK---GHKIHYSGPLVVP 641
Query: 179 SNNMDQMLKEHDRKIQEFSRRARIDKSRTK 208
S NMDQ+LK+HDR IQE RRARIDK+R K
Sbjct: 642 SGNMDQVLKDHDRHIQEAVRRARIDKARVK 671
>AT1G03740.1 | Symbols: | Protein kinase superfamily protein |
chr1:934055-936792 FORWARD LENGTH=740
Length = 740
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 45/186 (24%)
Query: 20 PHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLVPGYGWAKGAKEVDDG--- 76
PH GPV + + H + NN +G R SHSGPL+ AK V +
Sbjct: 589 PH-GPVPDYQNMQHNR--------NNQTG---VRISHSGPLMSNRNMAKSTMHVKENALP 636
Query: 77 --PPVSNRVNLSKLSGLVASRTSLPEDQGEKPAHLHHRKPVEVRKSVEATSGSESRRRHD 134
PP RVN LSG V+S+T L ++ ++P + + + R D
Sbjct: 637 RYPPA--RVNPKMLSGSVSSKTLL--ERQDQPV------------TNQRRRDRRAYNRAD 680
Query: 135 QKRIVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLVSSNNMDQMLKEHDRKIQ 194
+D+R + A P +KIYMSGPLL + +DQML+EHDR++Q
Sbjct: 681 T--------MDSRHMTA----PIDPSWYNPSDSKIYMSGPLLAQPSRVDQMLEEHDRQLQ 728
Query: 195 EFSRRA 200
EF+R+A
Sbjct: 729 EFNRQA 734
>AT5G44290.4 | Symbols: | Protein kinase superfamily protein |
chr5:17840750-17843190 REVERSE LENGTH=644
Length = 644
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 164 SGGNKIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRR 199
SG NK+YMSGPLL +DQML+EHDR++Q+F+R+
Sbjct: 602 SGDNKMYMSGPLLAQPRKVDQMLEEHDRQLQDFTRQ 637
>AT5G44290.3 | Symbols: | Protein kinase superfamily protein |
chr5:17840750-17843190 REVERSE LENGTH=644
Length = 644
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 164 SGGNKIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRR 199
SG NK+YMSGPLL +DQML+EHDR++Q+F+R+
Sbjct: 602 SGDNKMYMSGPLLAQPRKVDQMLEEHDRQLQDFTRQ 637
>AT5G44290.2 | Symbols: | Protein kinase superfamily protein |
chr5:17840750-17843190 REVERSE LENGTH=644
Length = 644
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 164 SGGNKIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRR 199
SG NK+YMSGPLL +DQML+EHDR++Q+F+R+
Sbjct: 602 SGDNKMYMSGPLLAQPRKVDQMLEEHDRQLQDFTRQ 637
>AT5G44290.1 | Symbols: | Protein kinase superfamily protein |
chr5:17840750-17843190 REVERSE LENGTH=644
Length = 644
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 164 SGGNKIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRR 199
SG NK+YMSGPLL +DQML+EHDR++Q+F+R+
Sbjct: 602 SGDNKMYMSGPLLAQPRKVDQMLEEHDRQLQDFTRQ 637
>AT1G09600.1 | Symbols: | Protein kinase superfamily protein |
chr1:3108617-3111318 FORWARD LENGTH=714
Length = 714
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 168 KIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRRARIDKSRTKGEKVRAQ 215
+++ SGPL+ + N+D+MLKEH+R+IQ R+AR+DK +G+ + Q
Sbjct: 659 RMHCSGPLVSAGGNLDEMLKEHERQIQLAVRKARVDKKTNRGDNRQTQ 706
>AT1G33770.1 | Symbols: | Protein kinase superfamily protein |
chr1:12242126-12244462 FORWARD LENGTH=614
Length = 614
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 167 NKIYMSGPLLVSSNNMDQMLKEHDRKIQEFSRRARIDKSRTKGEK 211
N+++ SGPL+ N++ M+KEH+R+IQE R++R++KS TK K
Sbjct: 562 NRMHYSGPLMPPGGNIEDMMKEHERRIQEAVRKSRLEKSATKKNK 606