Miyakogusa Predicted Gene

Lj2g3v2879490.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2879490.2 Non Chatacterized Hit- tr|D8UAV0|D8UAV0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,56.76,0.00000000000005,UNCHARACTERIZED,NULL; DUF423,Protein of
unknown function DUF423,CUFF.39482.2
         (111 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04900.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   194   8e-51
AT2G04900.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   140   2e-34

>AT2G04900.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF423 (InterPro:IPR006696);
           Has 1824 Blast hits to 1824 proteins in 878 species:
           Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14;
           Plants - 58; Viruses - 0; Other Eukaryotes - 136
           (source: NCBI BLink). | chr2:1722500-1723606 FORWARD
           LENGTH=128
          Length = 128

 Score =  194 bits (494), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 92/111 (82%), Positives = 101/111 (90%)

Query: 1   MDPHLWHKVAAISGVAALGLGTYGAHGFKPQNPSYKEVWHTASLYHLVHTAALLAAPITK 60
           MDP +WHKVAAISG+AALGLGTYGAH FKP+NPSYK+VW TASLYHLVHTAAL++AP TK
Sbjct: 18  MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61  HPNAFGGLLTAGIVAFSGTCYTVAFLEDRKYSTLAPFGGFAFIAAWGSLFF 111
           +PN FGGLLTAGIVAFSGTCY VA  EDRK+STLAPFGGFAFIAAW +L F
Sbjct: 78  YPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128


>AT2G04900.2 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; LOCATED IN:
          cellular_component unknown; EXPRESSED IN: 23 plant
          structures; EXPRESSED DURING: 15 growth stages;
          CONTAINS InterPro DOMAIN/s: Protein of unknown function
          DUF423 (InterPro:IPR006696); Has 30201 Blast hits to
          17322 proteins in 780 species: Archae - 12; Bacteria -
          1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
          Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
          BLink). | chr2:1722500-1723520 FORWARD LENGTH=98
          Length = 98

 Score =  140 bits (352), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 74/81 (91%)

Query: 1  MDPHLWHKVAAISGVAALGLGTYGAHGFKPQNPSYKEVWHTASLYHLVHTAALLAAPITK 60
          MDP +WHKVAAISG+AALGLGTYGAH FKP+NPSYK+VW TASLYHLVHTAAL++AP TK
Sbjct: 18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61 HPNAFGGLLTAGIVAFSGTCY 81
          +PN FGGLLTAGIVAFSG  +
Sbjct: 78 YPNIFGGLLTAGIVAFSGVIW 98