Miyakogusa Predicted Gene

Lj2g3v2879450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2879450.1 tr|G7KHA2|G7KHA2_MEDTR Nuclear factor NF-kappa-B
p105 subunit OS=Medicago truncatula GN=MTR_5g085340,72.39,0,Ankyrin
repeat,Ankyrin repeat-containing domain; seg,NULL; PGG,PGG domain; no
description,Ankyrin re,CUFF.39470.1
         (351 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18670.1 | Symbols:  | Ankyrin repeat family protein | chr3:6...   139   3e-33
AT5G35810.1 | Symbols:  | Ankyrin repeat family protein | chr5:1...   131   6e-31
AT5G04700.1 | Symbols:  | Ankyrin repeat family protein | chr5:1...   130   1e-30
AT5G04730.1 | Symbols:  | Ankyrin-repeat containing protein | ch...   122   3e-28
AT5G04690.1 | Symbols:  | Ankyrin repeat family protein | chr5:1...   121   7e-28
AT3G54070.1 | Symbols:  | Ankyrin repeat family protein | chr3:2...   117   1e-26
AT5G04680.1 | Symbols:  | Ankyrin repeat family protein | chr5:1...   105   4e-23

>AT3G18670.1 | Symbols:  | Ankyrin repeat family protein |
           chr3:6424135-6426471 REVERSE LENGTH=598
          Length = 598

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 5/304 (1%)

Query: 45  ALLVAARNGIVEIVTEIVSRVPSAIHNTNKKKQNVLLVAVKNRQPLVVETLRKLSKPELW 104
           AL  A  NGIVE + E++   P  + + N    N+   AV  RQ  +   +  +   +  
Sbjct: 292 ALFKAVENGIVEYIEEMMRHYPDIVWSKNSSGLNIFFYAVSQRQEKIFSLIYNIGAKK-- 349

Query: 105 NNFILAVDEHENTMLHLAAEALGGDNPWQIAGSALQMMWDIKWFQYIKSLV-PQHFYFRS 163
           N      D   N MLH AA          I G+ALQM  +++WF+ ++ LV P+H    +
Sbjct: 350 NILATNWDIFHNNMLHHAAYRAPASRLNLIPGAALQMQRELQWFKEVEKLVQPKHRKMVN 409

Query: 164 NQSGNTAGEVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVSFATASAVPGGTDEEGK 223
            +   T   +FT  H DL+ +  +W+K+T+ SC+VVA L+  + F++A  VPGG   +G 
Sbjct: 410 LKQKKTPKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMMFSSAFTVPGGYRSDGM 469

Query: 224 PHLEGKPAFDVFAIASLVGLCFSVTGLIMFLSILTSRKQAKDFRXXXXXXXXXXXXXXXX 283
           P    +  F +F I+  + L  S   L+MFL IL SR + +DF                 
Sbjct: 470 PLYIHQHRFKIFLISDAISLFTSCMSLLMFLGILKSRYREEDFLRSLPTKLIVGLLALFL 529

Query: 284 XIASMFISFCTGHFFLLNHKYKSIMFPIYGATSIPVTFYAISQFPLYFDLLTGILIKVPN 343
            +A+M ++F      L+  K   +         IP+  + + QFP+  ++        PN
Sbjct: 530 SMATMIVTFVVTLMTLVGEKISWVSAQFMFLAVIPLGMFVVLQFPVLLEIFRATY--CPN 587

Query: 344 ASDK 347
             DK
Sbjct: 588 VFDK 591


>AT5G35810.1 | Symbols:  | Ankyrin repeat family protein |
           chr5:13993428-13994549 REVERSE LENGTH=347
          Length = 347

 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 13/313 (4%)

Query: 31  PRECDEREVDKKETALLVAARNGIVEIVTEIVSRVPSAIHNTNKKKQNVLLVAVKNRQPL 90
           P E   + V      L  AA++G +E++  ++   P  I   + K Q++  +A  NR   
Sbjct: 20  PVEEISQFVGSSPMLLFDAAQSGNLELLLILIRSYPDLIWTVDHKNQSLFHIAAINRHEK 79

Query: 91  VVETLRKLSKPELWNNFILAVDEHE--NTMLHLAAEALGGDNPWQIAGSALQMMWDIKWF 148
           +   + +L   +   + I    E E  + +LHL A     +    ++G+ALQM  +I W+
Sbjct: 80  IFNRIYELGAIK---DLIAMYKEKESNDNLLHLVARLPPPNRLQVVSGAALQMQREILWY 136

Query: 149 QYIKSLVPQHFYFRSNQSGNTAGEVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVSF 208
           + +K +VP+ +    N+    A ++FT+ H +L +E  +W+K+T+ +C +V+ L+A V F
Sbjct: 137 KAVKEIVPRVYIKTKNKKEEVAHDLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVF 196

Query: 209 ATASAVPGGTDEEGKPHLEGKPA------FDVFAIASLVGLCFSVTGLIMFLSILTSRKQ 262
           A A  +PGG D  G     G P       F+VF I+  V L  SVT +++FLSILTSR  
Sbjct: 197 AAAFTLPGGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYA 256

Query: 263 AKDFRXXXXXXXXXXXXXXXXXIASMFISFCTGHFFLLNHKYK-SIMFPIYGATSIPVTF 321
              F+                 I SM ++F      + + + K S++  +Y A++  ++F
Sbjct: 257 EASFQTTLPTKLMLGLLALFVSIISMVLAFTATLILIRDQEPKWSLILLVYVASATALSF 316

Query: 322 YAISQFPLYFDLL 334
             +  F L+FD L
Sbjct: 317 -VVLHFQLWFDTL 328


>AT5G04700.1 | Symbols:  | Ankyrin repeat family protein |
           chr5:1354240-1356754 REVERSE LENGTH=669
          Length = 669

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 11/298 (3%)

Query: 43  ETALLVAARNGIVEIVTEIVSRVPSAIHNTNKKKQNVL-LVAVKNRQPLVVETLRKLSKP 101
           + ALL A R G V+ + E++      + +T     + L L+AV+ RQ  V   L  L   
Sbjct: 360 DEALLFAVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDD- 418

Query: 102 ELWNNFILAVDEH--ENTMLHLAAEALGGDNPWQIAGSALQMMWDIKWFQYIKSLVPQHF 159
                ++L  D+    N +LHLA           + G+ LQ+  +++WF+ ++ + P+  
Sbjct: 419 ---RKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIE 475

Query: 160 YFRSNQSGNTAGEVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVSFATASAVPGGTD 219
             R N    T  E+FT+ H  L +E+ +W+KDT+ SCS+VA L+  V+FA    VPGGTD
Sbjct: 476 KERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTD 535

Query: 220 E--EGKP-HLEGKPAFDVFAIASLVGLCFSVTGLIMFLSILTSRKQAKDFRXXXXXXXXX 276
           +  +GKP HL  +  F +F ++ L+    S T +++FL ILT+R    DF          
Sbjct: 536 DNSKGKPFHLRDR-RFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIA 594

Query: 277 XXXXXXXXIASMFISFCTGHFFLLNHKYKSIMFPIYGATSIPVTFYAISQFPLYFDLL 334
                   IA+M I+F +  F ++  + K I+ P      +P   + + Q+PL  +++
Sbjct: 595 GLSILFVSIAAMLIAFSSALFTMMGKEGKWIVAPTILFACLPALLFVLLQYPLLKEMI 652


>AT5G04730.1 | Symbols:  | Ankyrin-repeat containing protein |
           chr5:1364101-1367303 REVERSE LENGTH=603
          Length = 603

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 16/338 (4%)

Query: 4   LKEENEPEANMKKEISTTRSETIKDTNPRECDEREVDKKET---ALLVAARNGIVEIVTE 60
           LK+ +     + K++ T+  + +         + E+  KET   ALL AA++G  +   E
Sbjct: 261 LKKRHSQAQKLLKQMCTSLRDIMA--------KNEIRWKETVYEALLEAAKSGNRDFFIE 312

Query: 61  IVSRVPSAIHNTNKKK-QNVLLVAVKNRQPLVVETLRKLSKPELWNNFILAVDEHENTML 119
           I+      +   N    +N+  +AV+ ++  +   +  L   ++    + + D+  N +L
Sbjct: 313 IIKCNSQLLWILNPTSGRNLFQLAVEFKKEKIFNLIHGLDDRKV--TLLRSYDKGNNNIL 370

Query: 120 HLAAEALGGDNPWQIAGSALQMMWDIKWFQYIKSLVPQHFYFRSNQSGNTAGEVFTRTHV 179
           H+A      D   +I+G+AL+M  + +WF+ ++SLV +    + N+   T  ++F   H 
Sbjct: 371 HIAGRLSTPDQLSKISGAALKMQRESQWFKEVESLVSEREVVQKNKDNKTPRQIFEHYHE 430

Query: 180 DLIRESAEWLKDTSESCSVVAGLVAGVSFATASAVPGGTD-EEGKPHLEGKPAFDVFAIA 238
            L +E  EW+K T+ +CS VA L+A V+F     VPGG D   G P +     F  F   
Sbjct: 431 HLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGSPLILNDLHFRAFIFT 490

Query: 239 SLVGLCFSVTGLIMFLSILTSRKQAKDFRXXXXXXXXXXXXXXXXXIASMFISFCTGHFF 298
             +    S   +++FLSILTSR    DF                  IASM ++F T    
Sbjct: 491 DTLAFFASCISVLIFLSILTSRYSFDDFIVSLPRKMILGQSILFISIASMLVAFITSLSA 550

Query: 299 LLNHKYKSIMFPIYGATSIPVTFYAISQFPLYFDLLTG 336
            + HK  ++++P+    S P   + + Q+PL  ++++ 
Sbjct: 551 SMRHK-PALVYPLKPLASFPSLLFLMLQYPLLKEMISS 587


>AT5G04690.1 | Symbols:  | Ankyrin repeat family protein |
           chr5:1349781-1352525 REVERSE LENGTH=625
          Length = 625

 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 8/294 (2%)

Query: 43  ETALLVAARNGIVEIVTEIVSRVPSAIHNTNKKKQNVLLVAVKNRQPLVVETLRKLSKPE 102
           + ALL A R G V+ + E++      + +T      +   AV+ RQ  V   L  L   +
Sbjct: 321 DEALLFAVRYGNVDFLVEMIKNNSELLWSTGT--STLFNTAVQVRQEKVFSLLYGLGDRK 378

Query: 103 LWNNFILAVDEHENTMLHLAAEALGGDNPWQIAGSALQMMWDIKWFQYIKSLVPQHFYFR 162
               F+   D   N++LHLA           +  + LQM  +++WF+ ++ +VP     R
Sbjct: 379 YL--FLADKDSDGNSVLHLAGYPPPNYKLATVVSATLQMQRELQWFKEMERIVPAIENER 436

Query: 163 SNQSGNTAGEVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVSFATASAVPGGTDEE- 221
            N    T  E+F + H  +  E+ +W+KDT+ SCS+VA L+  V+FA    VPGGTD+  
Sbjct: 437 VNTENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNS 496

Query: 222 -GKPHLEGKPAFDVFAIASLVGLCFSVTGLIMFLSILTSRKQAKDFRXXXXXXXXXXXXX 280
            G+P    +  F +F ++ L+    + T +++FL ILT+R    DF              
Sbjct: 497 GGRPFHRHERIFVIFIVSDLISCFAACTSVLIFLGILTARYAFDDFLFSLPANMIAGLST 556

Query: 281 XXXXIASMFISFCTGHFFLLNHKYKSIMFPIYGATSIPVTFYAISQFPLYFDLL 334
               IA+M ++F +  F + N  +  I+ P       P   + + Q+PL  +L+
Sbjct: 557 LFVSIAAMLVAFSSALFTIFNDPW--IVAPTIFFACFPALLFVMIQYPLLKELI 608


>AT3G54070.1 | Symbols:  | Ankyrin repeat family protein |
           chr3:20021330-20023603 REVERSE LENGTH=574
          Length = 574

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 113 EHENTMLHLAAEALGGDNPWQI-AGSALQMMWDIKWFQYIKSLVPQHFYFRSNQSGNTAG 171
           + ++T+LHL A  L   N  Q+ +G+AL M  ++ WF+ +K +VP+ +    N  G  A 
Sbjct: 325 QSKDTLLHLVAR-LPPMNRQQVGSGAALHMQKELLWFKAVKEIVPRSYIETKNTKGELAH 383

Query: 172 EVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVSFATASAVPGGTDEEGK-------P 224
           ++FT  H +L +E   W+K+T+ +C + A L+A V FA A  +PGG D+ G        P
Sbjct: 384 DIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGGNDDSGDKANTLGFP 443

Query: 225 HLEGKPAFDVFAIASLVGLCFSVTGLIMFLSILTSRKQAKDFRXXXXXXXXXXXXXXXXX 284
           +   +  FD+F ++  V L  S+  +++FLSI TSR   +DFR                 
Sbjct: 444 NFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDFRYDLPTKLMFGLSALFIS 503

Query: 285 IASMFISFCTGHFFLLNHKYKSIMFPIYGATSIPVTFYAISQFPLYFDLLTGILIKV 341
           I SM ++F      +   K    +  I    S+    +A   F L+F+ L  + I +
Sbjct: 504 IISMILAFTFSMILIRVEKASLSLVLISCLASLTALTFAYLYFHLWFNTLRSVYISM 560


>AT5G04680.1 | Symbols:  | Ankyrin repeat family protein |
           chr5:1346314-1348850 REVERSE LENGTH=693
          Length = 693

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 19/301 (6%)

Query: 43  ETALLVAARNGIVEIVTEIVSRVPSAIHNTNKKKQNVL-LVAVKNRQPLVVETLRKLSKP 101
           + ALL A R G V+ + E++      + +T     + L L+AV+ RQ  V   L  L   
Sbjct: 376 DEALLFAVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFNLLYGLDD- 434

Query: 102 ELWNNFILAVDEHE--NTMLHLAAEALGGDNPWQIAGSALQMMWDIKWFQYIKSLVPQHF 159
                ++L  D+    N +LHLA           +  + L+M  +++WF+ ++ + P+  
Sbjct: 435 ---RKYLLLADKDSDGNGVLHLAGFPSPPSKLASVICAPLRMQRELQWFKEVERIAPEIE 491

Query: 160 YFRSNQSGNTAGEVFTRTHVDLIRESAEWLKDTSESCSVVAGLVAGVS---------FAT 210
             R N    T  E+F + H  L +E+ +W+KDT+ SCS+VA L+  V+         FA 
Sbjct: 492 KERVNTEEQTPIEIFAKEHQGLRQEAEKWMKDTAMSCSLVAALIVMVTFAALIITVIFAA 551

Query: 211 ASAVPGGTDE--EGKPHLEGKPAFDVFAIASLVGLCFSVTGLIMFLSILTSRKQAKDFRX 268
              V GG+D+  EG P    +  F +F ++ L+    + T + +FL ILT+R    DF  
Sbjct: 552 VFTVSGGSDDNSEGNPFHLYEQRFIIFIVSDLISCFAACTAVPIFLGILTARYSFDDFLV 611

Query: 269 XXXXXXXXXXXXXXXXIASMFISFCTGHFFLLNHKYKSIMFPIYGATSIPVTFYAISQFP 328
                           IA+M I+F      ++N K K I+ P      +P   + + Q+P
Sbjct: 612 ALPTKMITGLSILFVSIAAMLIAFSLVLITMMN-KGKWIVAPTILCACLPALLFVLLQYP 670

Query: 329 L 329
           L
Sbjct: 671 L 671