Miyakogusa Predicted Gene
- Lj2g3v2877210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2877210.1 Non Chatacterized Hit- tr|I1R036|I1R036_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,51.25,3e-18,no
description,NULL; seg,NULL; zf-CCCH,Zinc finger, CCCH-type; ZINC
FINGER CCCH DOMAIN-CONTAINING PR,CUFF.39378.1
(263 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 150 1e-36
AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 150 1e-36
AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 | chr3:61407... 145 2e-35
AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 134 7e-32
AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 133 1e-31
AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 131 5e-31
AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 130 6e-31
AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 124 6e-29
AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 123 2e-28
AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 122 2e-28
AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 122 2e-28
AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 122 3e-28
AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 122 3e-28
AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 122 3e-28
AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 120 7e-28
AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 119 3e-27
AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) | c... 93 2e-19
AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 91 7e-19
AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 48 9e-06
AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 47 1e-05
>AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 115/209 (55%), Gaps = 22/209 (10%)
Query: 1 MRTGSCKFGAACKFHHPQ-QHASFGAYSLAGSPTSTIIPASSLPYV---GAFPAWSVPRM 56
+RTG+C+FG ACKFHHPQ + AY ++ P + + AS L + G P VP+
Sbjct: 145 LRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQ- 203
Query: 57 SYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESLS 116
SY+ +P Q W YM + N S + N Y Y S++
Sbjct: 204 SYV---------PILVSPSQGFLPPQGWAPYMAASN----SMYNVKNQPY-YSGSSASMA 249
Query: 117 GGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ---SLINPLGLPVRPG 173
AL+ L + DQPEC++FM+TGTCKYG DCK+ HP R++Q SLINP LP RPG
Sbjct: 250 MAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPG 309
Query: 174 QAICSYYRIYGICKFGPTCKFDHPVVAIP 202
Q C +R YG CKFGP CKFDHP++ P
Sbjct: 310 QPACGNFRSYGFCKFGPNCKFDHPMLPYP 338
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQS--LINPLGLPVRPGQAICSYYRI 182
LP+R QP+C+YF+ TG CKYG CK+HHPK+R + N +GLP+R G+ C YY
Sbjct: 87 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLR 146
Query: 183 YGICKFGPTCKFDHPVVAIPQN-----YGMTS-PSLSVLDASSL 220
G C+FG CKF HP P N YGM+S P+ + AS L
Sbjct: 147 TGTCRFGVACKFHHPQ---PDNGHSTAYGMSSFPAADLRYASGL 187
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAICSYYRIYGI 185
PDRP + +C++++ TG C YGS C+++HP LP R GQ C Y+ G
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGA 104
Query: 186 CKFGPTCKFDHP 197
CK+GPTCK+ HP
Sbjct: 105 CKYGPTCKYHHP 116
>AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 115/209 (55%), Gaps = 22/209 (10%)
Query: 1 MRTGSCKFGAACKFHHPQ-QHASFGAYSLAGSPTSTIIPASSLPYV---GAFPAWSVPRM 56
+RTG+C+FG ACKFHHPQ + AY ++ P + + AS L + G P VP+
Sbjct: 145 LRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQ- 203
Query: 57 SYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESLS 116
SY+ +P Q W YM + N S + N Y Y S++
Sbjct: 204 SYV---------PILVSPSQGFLPPQGWAPYMAASN----SMYNVKNQPY-YSGSSASMA 249
Query: 117 GGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ---SLINPLGLPVRPG 173
AL+ L + DQPEC++FM+TGTCKYG DCK+ HP R++Q SLINP LP RPG
Sbjct: 250 MAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPG 309
Query: 174 QAICSYYRIYGICKFGPTCKFDHPVVAIP 202
Q C +R YG CKFGP CKFDHP++ P
Sbjct: 310 QPACGNFRSYGFCKFGPNCKFDHPMLPYP 338
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQS--LINPLGLPVRPGQAICSYYRI 182
LP+R QP+C+YF+ TG CKYG CK+HHPK+R + N +GLP+R G+ C YY
Sbjct: 87 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLR 146
Query: 183 YGICKFGPTCKFDHPVVAIPQN-----YGMTS-PSLSVLDASSL 220
G C+FG CKF HP P N YGM+S P+ + AS L
Sbjct: 147 TGTCRFGVACKFHHPQ---PDNGHSTAYGMSSFPAADLRYASGL 187
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAICSYYRIYGI 185
PDRP + +C++++ TG C YGS C+++HP LP R GQ C Y+ G
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGA 104
Query: 186 CKFGPTCKFDHP 197
CK+GPTCK+ HP
Sbjct: 105 CKYGPTCKYHHP 116
>AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 |
chr3:614075-615916 FORWARD LENGTH=397
Length = 397
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 138/282 (48%), Gaps = 59/282 (20%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPAS---SLPYVGAF----PAWSV 53
+RTG CKFG CKF+HPQ PT+ ++P S S P+ A P W
Sbjct: 141 LRTGHCKFGGTCKFNHPQPQ-----------PTNMMVPTSGQQSYPWSRASFIASPRWQD 189
Query: 54 PRMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYM---- 109
P SY S +VP Q WN Y G + PS G++ Y +
Sbjct: 190 PS-SYAS-----------LIMPQGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNE 236
Query: 110 ---------------NPGES--LSGGQAL--SSTLPDRPDQPECKYFMSTGTCKYGSDCK 150
NPG S L G AL + P+RP QPEC+++M TG CK+G+ CK
Sbjct: 237 TIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCK 296
Query: 151 FHHPKERVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIPQNYGM 207
FHHP++R A L++ +GLP+RPG+ +C +Y YGICKFGP+CKFDHP+ +
Sbjct: 297 FHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYD-NT 355
Query: 208 TSPSLSVLDASSLMSNPRGFSSTVQLTETSPPKLSS-DKLQQ 248
S + V++ S+ S S T Q TS K ++ D QQ
Sbjct: 356 ASETDEVVETSTGKSRRLSVSETRQAATTSSGKDTTIDNTQQ 397
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--- 157
GS + + E + + P+R QPEC+Y++ TGTCK+G CKFHHP+ +
Sbjct: 58 GSTCRFNHPRDRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGI 117
Query: 158 VAQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
+ +N LG P+R + C+Y+ G CKFG TCKF+HP
Sbjct: 118 AGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHP 157
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 114 SLSGGQALSS-TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--VAQSLINPLGLPV 170
+LS + + + + P+RP +P+C Y++ TG C++GS C+F+HP++R V + P
Sbjct: 25 NLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYPE 84
Query: 171 RPGQAICSYYRIYGICKFGPTCKFDHP 197
R GQ C YY G CKFG TCKF HP
Sbjct: 85 RIGQPECEYYLKTGTCKFGVTCKFHHP 111
>AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=375
Length = 375
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 128/254 (50%), Gaps = 38/254 (14%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
+R G CKFG CKF+HPQ ++ S+ GSP S+L + P++S R S+++
Sbjct: 143 LRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV-----YSALQSLTGQPSYSWSRTSFVA 197
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLV--YEYMNPGESLSGG 118
GS S F N V Y P E++
Sbjct: 198 NPPRLQDPSGFAS---------------GSQGGLFSSGFHSGNSVPLGFYALPRENV--- 239
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA---QSLINPLGLPVRPGQA 175
P+RP QPEC+++M TG CK+G+ CKFHHP++R +++ +GLP+RPG+
Sbjct: 240 ------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEP 293
Query: 176 ICSYYRIYGICKFGPTCKFDHP--VVAIPQNYGMTSPSLSVLDASSLMSNPRGF--SSTV 231
+C +Y YGICKFGP+CKFDHP V N SPS S+ +++ + R SS+V
Sbjct: 294 LCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITTELRNLLVSSSV 353
Query: 232 QLTETSPPKLSSDK 245
+ TS P+ +S K
Sbjct: 354 EAKPTSLPETTSAK 367
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERV---AQSLINPLGLPVRPGQAIC 177
+ P+R QPEC++++ TGTCK+G CKFHHP+ + +N L P+RP + C
Sbjct: 80 IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDC 139
Query: 178 SYYRIYGICKFGPTCKFDHP 197
SY+ G CKFG TCKF+HP
Sbjct: 140 SYFLRIGQCKFGGTCKFNHP 159
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINP 165
MN G + G + + P+R +P+C Y++ TG C++GS C+F+HP +R +A + I
Sbjct: 25 MNLGSDDTMG--VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG 82
Query: 166 LGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C +Y G CKFG TCKF HP
Sbjct: 83 -EYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPV 170
P RP++ +C YF+ G CK+G CKF+HP+ + +++ G PV
Sbjct: 131 PLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 175
>AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403598-5405034 FORWARD LENGTH=354
Length = 354
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 128/254 (50%), Gaps = 38/254 (14%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
+R G CKFG CKF+HPQ ++ S+ GSP S+L + P++S R S+++
Sbjct: 122 LRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV-----YSALQSLTGQPSYSWSRTSFVA 176
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLV--YEYMNPGESLSGG 118
GS S F N V Y P E++
Sbjct: 177 NPPRLQDPSGFAS---------------GSQGGLFSSGFHSGNSVPLGFYALPRENV--- 218
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA---QSLINPLGLPVRPGQA 175
P+RP QPEC+++M TG CK+G+ CKFHHP++R +++ +GLP+RPG+
Sbjct: 219 ------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEP 272
Query: 176 ICSYYRIYGICKFGPTCKFDHP--VVAIPQNYGMTSPSLSVLDASSLMSNPRGF--SSTV 231
+C +Y YGICKFGP+CKFDHP V N SPS S+ +++ + R SS+V
Sbjct: 273 LCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITTELRNLLVSSSV 332
Query: 232 QLTETSPPKLSSDK 245
+ TS P+ +S K
Sbjct: 333 EAKPTSLPETTSAK 346
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERV---AQSLINPLGLPVRPGQAIC 177
+ P+R QPEC++++ TGTCK+G CKFHHP+ + +N L P+RP + C
Sbjct: 59 IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDC 118
Query: 178 SYYRIYGICKFGPTCKFDHP 197
SY+ G CKFG TCKF+HP
Sbjct: 119 SYFLRIGQCKFGGTCKFNHP 138
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINP 165
MN G + G + + P+R +P+C Y++ TG C++GS C+F+HP +R +A + I
Sbjct: 4 MNLGSDDTMG--VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG 61
Query: 166 LGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C +Y G CKFG TCKF HP
Sbjct: 62 -EYPERIGQPECEFYLKTGTCKFGVTCKFHHP 92
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPV 170
P RP++ +C YF+ G CK+G CKF+HP+ + +++ G PV
Sbjct: 110 PLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 154
>AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965990-13968419 REVERSE LENGTH=453
Length = 453
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 113/213 (53%), Gaps = 20/213 (9%)
Query: 1 MRTGSCKFGAACKFHHPQQHAS----FGAYSLAGSPTSTIIPASSLPYVGAFPAW--SVP 54
M+TG C+FG ACKFHHP H+ AY+++ P+ AS + V PA ++P
Sbjct: 139 MQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIP 198
Query: 55 RMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES 114
R Q ++P Q W TYM + NP N+ + ++ S
Sbjct: 199 RPQVPQSQAYMPYMVAPSQG---LLPPQGWATYMTASNPIY-------NMKTQ-LDSSSS 247
Query: 115 LSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQS---LINPLGLPVR 171
S ++S ++ EC++FM+TGTCKYG DCK+ HPKER+ QS L+NP+ LP R
Sbjct: 248 ASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPAR 307
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHPVVAIPQN 204
PGQ C ++ YG CKFG CKFDH ++ P N
Sbjct: 308 PGQPACGNFKAYGFCKFGANCKFDHSMLLNPYN 340
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--VAQSLINPLGLPVRPGQAICSYYRI 182
LP+R QP+C+ TG CKYG CK+HHPK+R L N LGLP+R G+ C YY
Sbjct: 85 LPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQ 140
Query: 183 YGICKFGPTCKFDHP 197
G+C+FG CKF HP
Sbjct: 141 TGLCRFGVACKFHHP 155
>AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965814-13968419 REVERSE LENGTH=467
Length = 467
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 113/213 (53%), Gaps = 20/213 (9%)
Query: 1 MRTGSCKFGAACKFHHPQQHAS----FGAYSLAGSPTSTIIPASSLPYVGAFPAW--SVP 54
M+TG C+FG ACKFHHP H+ AY+++ P+ AS + V PA ++P
Sbjct: 139 MQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIP 198
Query: 55 RMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES 114
R Q ++P Q W TYM + NP N+ + ++ S
Sbjct: 199 RPQVPQSQAYMPYMVAPSQG---LLPPQGWATYMTASNPIY-------NMKTQ-LDSSSS 247
Query: 115 LSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQS---LINPLGLPVR 171
S ++S ++ EC++FM+TGTCKYG DCK+ HPKER+ QS L+NP+ LP R
Sbjct: 248 ASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPAR 307
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHPVVAIPQN 204
PGQ C ++ YG CKFG CKFDH ++ P N
Sbjct: 308 PGQPACGNFKAYGFCKFGANCKFDHSMLLNPYN 340
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--VAQSLINPLGLPVRPGQAICSYYRI 182
LP+R QP+C+ TG CKYG CK+HHPK+R L N LGLP+R G+ C YY
Sbjct: 85 LPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQ 140
Query: 183 YGICKFGPTCKFDHP 197
G+C+FG CKF HP
Sbjct: 141 TGLCRFGVACKFHHP 155
>AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:17941402-17943576 FORWARD LENGTH=448
Length = 448
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLA-----GSPTSTIIPASSLPYVGAFPAWSVPR 55
MR GSCK+GA CKF+HP G S + G T P ++ + + +WS PR
Sbjct: 214 MRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKAT--FQASSTSWSSPR 271
Query: 56 MSYLSGQXXXXXXXXXXXXXXXIVPAQS--WNTYMGSMNPAMPSSFPGSNLVYEYMNPGE 113
+++G V +Q+ WN Y S+ + F S + E
Sbjct: 272 --HVNGTSPFIPVMLSQTHG---VTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAE 326
Query: 114 -----SLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ---SLINP 165
S Q + P+RPDQPEC Y+M TG CK+ +CK+HHPK R+ + +N
Sbjct: 327 TSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALND 386
Query: 166 LGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
GLP+RP Q IC+YY YGICKFGP C+FDH V
Sbjct: 387 KGLPLRPDQNICTYYSRYGICKFGPACRFDHSV 419
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 133 ECKYFMSTGTCKYGSDCKFHH--PKERVAQS-LINPLGLPVRPGQAICSYYRIYGICKFG 189
+CKY+ TG CKYG C+F+H PK +A + +N LGLP+RPG+ C YY G CK+G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 190 PTCKFDHP 197
CKF+HP
Sbjct: 223 AECKFNHP 230
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 123 STLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ-SLINPLGLPVRPGQAI----C 177
+ P RP +C ++M TG+CK+GS CKF+HP R Q + N + G + C
Sbjct: 105 NVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDC 164
Query: 178 SYYRIYGICKFGPTCKFDHPVVAIPQNYGMTSPSLSVL 215
YY G CK+G TC+F+H IP++ ++P L+ L
Sbjct: 165 KYYFRTGGCKYGETCRFNH---TIPKSGLASAPELNFL 199
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHP 154
LP RP + EC Y+M G+CKYG++CKF+HP
Sbjct: 201 LPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
>AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=442
Length = 442
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 120/256 (46%), Gaps = 65/256 (25%)
Query: 1 MRTGSCKFGAACKFHHPQQ------HASFGAYSL-AGSPTSTIIP-------------AS 40
++TG+CKFGA+CKFHHP+ H Y P T +P S
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREPAGTTVPPPPASAPQFYPSVQS 159
Query: 41 SLP--YVGAFPAWSVPRM----SYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPA 94
+P Y G + V R SY+ G +VP W+ Y ++PA
Sbjct: 160 LMPDQYGGPSSSLRVARTLLPGSYMQG------AYGPMLLTPGVVPIPGWSPYSAPVSPA 213
Query: 95 MPSSFPGSNLVYEYMNPGESLSGGQALSST-----------------------LPDRPDQ 131
+ PG+ ++ SL G L+ST P+RP +
Sbjct: 214 L---SPGA----QHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGE 266
Query: 132 PECKYFMSTGTCKYGSDCKFHHPKERV---AQSLINPLGLPVRPGQAICSYYRIYGICKF 188
PEC+Y++ TG CK+G+ CKFHHP++RV A +++P+GLP+RPG C++Y G CKF
Sbjct: 267 PECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKF 326
Query: 189 GPTCKFDHPVVAIPQN 204
G TCKFDHP+ I N
Sbjct: 327 GSTCKFDHPMGTIRYN 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 122 SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA-QSLINPLG-LPVRPGQAICSY 179
S + P+RP P+C Y+M TG C YG+ C+++HP++R + ++ + G P R G+ C +
Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQF 98
Query: 180 YRIYGICKFGPTCKFDHP 197
Y G CKFG +CKF HP
Sbjct: 99 YLKTGTCKFGASCKFHHP 116
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---R 157
G+ Y + S+ + P+R +P C++++ TGTCK+G+ CKFHHPK
Sbjct: 63 GNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGS 122
Query: 158 VAQSLINPLGLPVR 171
++ +N G PVR
Sbjct: 123 MSHVPLNIYGYPVR 136
>AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 45/236 (19%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLP--YVGAFPAWSVPRM-- 56
++TG CKFG CKFHHPQ + A +P S +P Y G + V R
Sbjct: 146 LKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLL 205
Query: 57 --SYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES 114
SY+ G +VP W+ Y ++PA+ PG+ ++ S
Sbjct: 206 PGSYMQG------AYGPMLLTPGVVPIPGWSPYSAPVSPALS---PGA----QHAVGATS 252
Query: 115 LSGGQALSST-----------------------LPDRPDQPECKYFMSTGTCKYGSDCKF 151
L G L+ST P+RP +PEC+Y++ TG CK+G+ CKF
Sbjct: 253 LYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKF 312
Query: 152 HHPKERV---AQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIPQN 204
HHP++RV A +++P+GLP+RPG C++Y G CKFG TCKFDHP+ I N
Sbjct: 313 HHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYN 368
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---R 157
G+ Y + S+ + P+R +P C++++ TGTCK+G+ CKFHHPK
Sbjct: 63 GNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGS 122
Query: 158 VAQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
++ +N G PVR G CSYY G CKFG TCKF HP
Sbjct: 123 MSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 162
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 122 SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA-QSLINPLG-LPVRPGQAICSY 179
S + P+RP P+C Y+M TG C YG+ C+++HP++R + ++ + G P R G+ C +
Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQF 98
Query: 180 YRIYGICKFGPTCKFDHPVVA 200
Y G CKFG +CKF HP A
Sbjct: 99 YLKTGTCKFGASCKFHHPKNA 119
>AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 45/236 (19%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLP--YVGAFPAWSVPRM-- 56
++TG CKFG CKFHHPQ + A +P S +P Y G + V R
Sbjct: 146 LKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLL 205
Query: 57 --SYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES 114
SY+ G +VP W+ Y ++PA+ PG+ ++ S
Sbjct: 206 PGSYMQG------AYGPMLLTPGVVPIPGWSPYSAPVSPALS---PGA----QHAVGATS 252
Query: 115 LSGGQALSST-----------------------LPDRPDQPECKYFMSTGTCKYGSDCKF 151
L G L+ST P+RP +PEC+Y++ TG CK+G+ CKF
Sbjct: 253 LYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKF 312
Query: 152 HHPKERV---AQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIPQN 204
HHP++RV A +++P+GLP+RPG C++Y G CKFG TCKFDHP+ I N
Sbjct: 313 HHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYN 368
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---R 157
G+ Y + S+ + P+R +P C++++ TGTCK+G+ CKFHHPK
Sbjct: 63 GNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGS 122
Query: 158 VAQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
++ +N G PVR G CSYY G CKFG TCKF HP
Sbjct: 123 MSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 162
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 122 SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA-QSLINPLG-LPVRPGQAICSY 179
S + P+RP P+C Y+M TG C YG+ C+++HP++R + ++ + G P R G+ C +
Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQF 98
Query: 180 YRIYGICKFGPTCKFDHPVVA 200
Y G CKFG +CKF HP A
Sbjct: 99 YLKTGTCKFGASCKFHHPKNA 119
>AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:6160515-6162729 FORWARD LENGTH=465
Length = 465
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 129/272 (47%), Gaps = 59/272 (21%)
Query: 1 MRTGSCKFGAACKFHHP-----QQHASFGAYSLAGSPT------STIIPASS-LPYVGAF 48
MRTG CKFG+ C++HHP Q + L+ PT S +P+S V A
Sbjct: 155 MRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVVLAR 214
Query: 49 PAW---SVPRMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFP----G 101
P S + Y GQ +VP WN Y S++ AMPS G
Sbjct: 215 PQLLPGSYVQSPYGYGQMVLPPG---------MVPYSGWNPYQASVS-AMPSPGTQPSMG 264
Query: 102 SNLVYEY--MNP-------GESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFH 152
++ VY ++P G S +G T P RP+QPEC+YFM TG CK+G+ C+FH
Sbjct: 265 TSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFH 324
Query: 153 HPKERVA--QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDH-------------- 196
HP E + S ++ +GLP+RPG C+++ +GICKFGP CKFDH
Sbjct: 325 HPMEAASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPS 384
Query: 197 -----PVVAIPQNYGMTSPSLSVLDASSLMSN 223
PV P + G +PS S + L+S+
Sbjct: 385 SLTDMPVAPYPSSLGTLAPSSSSDQCTELISS 416
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 115 LSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPK-----ERVAQSLINPLGLP 169
L G + + P+R QP C++FM TGTCK+G+ CK+HHP+ + V +N +G P
Sbjct: 84 LGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFP 143
Query: 170 VRPGQAICSYYRIYGICKFGPTCKFDHPV 198
+RPG+ CSY+ G CKFG TC++ HPV
Sbjct: 144 LRPGEKECSYFMRTGQCKFGSTCRYHHPV 172
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 124 TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--VAQSLINPLG-LPVRPGQAICSYY 180
T P+RPD+P+C Y++ TG C YGS C+F+HP+ R V L G P R GQ +C ++
Sbjct: 47 TFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHF 106
Query: 181 RIYGICKFGPTCKFDHP 197
G CKFG +CK+ HP
Sbjct: 107 MRTGTCKFGASCKYHHP 123
>AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=451
Length = 451
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYS--LAGSPTSTIIPASSLPYVGAFPAWSVPRMSY 58
MR GSCKFG+ CKF+HP A G S G+ + P + P + +WS R +
Sbjct: 220 MRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKA--PSQASSTSWSSTR--H 275
Query: 59 LSGQXXXXXXXXXXXXXXXIVP-AQSWNTYMGS------MNPAMPSSFPGSNLVYEYMNP 111
++G + P A WN Y S +P PSS+ +N + E
Sbjct: 276 MNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAE--TS 333
Query: 112 GESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL---INPLGL 168
S Q P+RPDQPEC Y++ TG CK+ CK+HHPK R+ + N GL
Sbjct: 334 SFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGL 393
Query: 169 PVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
P+RP Q++C++Y YGICKFGP C+FDH +
Sbjct: 394 PLRPDQSMCTHYSRYGICKFGPACRFDHSI 423
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 127 DRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLI---NPLGLPVRPGQAICSYYRIY 183
+ P ECKY+ TG CKYG C+F H KE + + + N LGLP+RPG+ C +Y
Sbjct: 163 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 222
Query: 184 GICKFGPTCKFDHP 197
G CKFG CKF+HP
Sbjct: 223 GSCKFGSDCKFNHP 236
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAI--------- 176
P RPD +C ++M TG+CKYGS CKF+HP R Q L + R G+
Sbjct: 99 PVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRER 158
Query: 177 -----------CSYYRIYGICKFGPTCKFDH 196
C YY G CK+G +C+F H
Sbjct: 159 DEDVENPKLMECKYYFRTGGCKYGESCRFSH 189
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL 166
LP RP + EC ++M G+CK+GSDCKF+HP + +PL
Sbjct: 207 LPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPL 248
>AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=435
Length = 435
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYS--LAGSPTSTIIPASSLPYVGAFPAWSVPRMSY 58
MR GSCKFG+ CKF+HP A G S G+ + P + P + +WS R +
Sbjct: 204 MRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKA--PSQASSTSWSSTR--H 259
Query: 59 LSGQXXXXXXXXXXXXXXXIVP-AQSWNTYMGS------MNPAMPSSFPGSNLVYEYMNP 111
++G + P A WN Y S +P PSS+ +N + E
Sbjct: 260 MNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAE--TS 317
Query: 112 GESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL---INPLGL 168
S Q P+RPDQPEC Y++ TG CK+ CK+HHPK R+ + N GL
Sbjct: 318 SFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGL 377
Query: 169 PVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
P+RP Q++C++Y YGICKFGP C+FDH +
Sbjct: 378 PLRPDQSMCTHYSRYGICKFGPACRFDHSI 407
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 133 ECKYFMSTGTCKYGSDCKFHHPKERVAQSLI---NPLGLPVRPGQAICSYYRIYGICKFG 189
ECKY+ TG CKYG C+F H KE + + + N LGLP+RPG+ C +Y G CKFG
Sbjct: 153 ECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFG 212
Query: 190 PTCKFDHP 197
CKF+HP
Sbjct: 213 SDCKFNHP 220
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL 166
LP RP + EC ++M G+CK+GSDCKF+HP + +PL
Sbjct: 191 LPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPL 232
>AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:1947471-1949528 REVERSE LENGTH=462
Length = 462
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 1 MRTGSCKFGAACKFHHPQQHA-------SFGAYSLAGSPTSTIIPASSLPYVGAFPAWSV 53
+RTG CKFG C+F+HP A TI P + + + +
Sbjct: 158 LRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGL 217
Query: 54 --PRMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFP----GSNLVY- 106
R S+L+G +VP WN Y S++ AMPS GS+ +Y
Sbjct: 218 VLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLS-AMPSPGTQPSIGSSSIYG 276
Query: 107 ---------EYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER 157
Y +S+ + S P RPDQPEC+YFM TG CK+GS C++HHP +
Sbjct: 277 LTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDA 336
Query: 158 V---AQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDH 196
V +++ +GLP+RPG A C+++ +GICKFGP CKFDH
Sbjct: 337 VPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 112 GESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE-----RVAQSLINPL 166
G + G + + LP+R P C++FM TGTCK+G+ CK+HHP++ VA ++ L
Sbjct: 84 GAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYL 143
Query: 167 GLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
G P+RPG+ CSYY G CKFG TC+F+HPV
Sbjct: 144 GYPLRPGEKECSYYLRTGQCKFGLTCRFNHPV 175
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 124 TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--VAQSLINPLG-LPVRPGQAICSYY 180
+ P+RPD+P+C Y++ TG C YGS C+F+HP++R V + G LP R G +C ++
Sbjct: 50 SYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHF 109
Query: 181 RIYGICKFGPTCKFDHP 197
G CKFG +CK+ HP
Sbjct: 110 MRTGTCKFGASCKYHHP 126
>AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=368
Length = 368
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 120/251 (47%), Gaps = 39/251 (15%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
+R G CKFG CKF+HPQ ++ S+ GSP S+L + P++S R S+++
Sbjct: 143 LRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV-----YSALQSLTGQPSYSWSRTSFVA 197
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLV--YEYMNPGESLSGG 118
GS S F N V Y P E++
Sbjct: 198 NPPRLQDPSGFAS---------------GSQGGLFSSGFHSGNSVPLGFYALPRENV--- 239
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAICS 178
P+RP QPEC+++M TG CK+G+ CKFHHP++R P + G+ +C
Sbjct: 240 ------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP----PPDCVLSSGEPLCV 289
Query: 179 YYRIYGICKFGPTCKFDHP--VVAIPQNYGMTSPSLSVLDASSLMSNPRGF--SSTVQLT 234
+Y YGICKFGP+CKFDHP V N SPS S+ +++ + R SS+V+
Sbjct: 290 FYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITTELRNLLVSSSVEAK 349
Query: 235 ETSPPKLSSDK 245
TS P+ +S K
Sbjct: 350 PTSLPETTSAK 360
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERV---AQSLINPLGLPVRPGQAIC 177
+ P+R QPEC++++ TGTCK+G CKFHHP+ + +N L P+RP + C
Sbjct: 80 IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDC 139
Query: 178 SYYRIYGICKFGPTCKFDHP 197
SY+ G CKFG TCKF+HP
Sbjct: 140 SYFLRIGQCKFGGTCKFNHP 159
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINP 165
MN G + G + + P+R +P+C Y++ TG C++GS C+F+HP +R +A + I
Sbjct: 25 MNLGSDDTMG--VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG 82
Query: 166 LGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C +Y G CKFG TCKF HP
Sbjct: 83 -EYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPV 170
P RP++ +C YF+ G CK+G CKF+HP+ + +++ G PV
Sbjct: 131 PLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 175
>AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) |
chr3:4025276-4028999 REVERSE LENGTH=524
Length = 524
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 67/207 (32%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
++TGSCK+GA C+++HP++ T+ I A+ + Y
Sbjct: 350 LKTGSCKYGATCRYNHPER-------------TAFIPQAAGVNY---------------- 380
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESLSGGQA 120
+V + + N +G + PA +SF Y + G
Sbjct: 381 ----------------SLVSSNTANLNLGLVTPA--TSF--------YQTLTQPTLG--V 412
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA----------QSLINPLGLPV 170
+S+T P RP Q EC Y+M TG CK+G CKFHHP +R++ ++ G P
Sbjct: 413 ISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPR 472
Query: 171 RPGQAICSYYRIYGICKFGPTCKFDHP 197
R G C YY G CK+G TCKFDHP
Sbjct: 473 REGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAICSYYRIYGI 185
P+RP +P+C Y++ T CKYGS CKF+HP+E A S+ LP RP + +C++Y G
Sbjct: 223 PERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGK 282
Query: 186 CKFGPTCKFDHPV-VAIPQNYGMTSPSLSVLDASSLMSNPR 225
CKFG +CKF HP + +P + S+ + +NP
Sbjct: 283 CKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPH 323
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 86/255 (33%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
M+T +CKFG +C+F HP +P G P W
Sbjct: 184 MQTRTCKFGESCRFDHP-----------------IWVPE------GGIPDWK-------- 212
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVY----EYMNPGESLS 116
+VP + + G P P Y ++ +P E +
Sbjct: 213 --------------EAPVVPNEEYPERPG--EPDCPYYIKTQRCKYGSKCKFNHPREEAA 256
Query: 117 GGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE--------RVAQSL------ 162
+LP+RP +P C ++M TG CK+G CKFHHPK+ + S+
Sbjct: 257 VSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEP 316
Query: 163 ---------------INPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP--VVAIPQ-- 203
N GLPVR G+ C +Y G CK+G TC+++HP IPQ
Sbjct: 317 DATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAA 376
Query: 204 --NYGMTSPSLSVLD 216
NY + S + + L+
Sbjct: 377 GVNYSLVSSNTANLN 391
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHP--------KERVAQSLINPLGLPVRPGQAIC 177
P R + +C ++M T TCK+G C+F HP + ++ P RPG+ C
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 231
Query: 178 SYYRIYGICKFGPTCKFDHP 197
YY CK+G CKF+HP
Sbjct: 232 PYYIKTQRCKYGSKCKFNHP 251
>AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:17796349-17796597 FORWARD LENGTH=82
Length = 82
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 122 SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVA---QSLINPLGLPVRPGQAICS 178
P+RP +PEC Y++ TG C +CK+HHPK Q +N GLP+RPGQAIC
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICP 62
Query: 179 YYRIYGICKFGPTCKFDH 196
+Y +GIC+ GPTCKFDH
Sbjct: 63 HYSRFGICRSGPTCKFDH 80
>AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:10344046-10346243 FORWARD LENGTH=389
Length = 389
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 120 ALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL-GLPVRPGQAI-C 177
LSS P RP + C ++M C++GS+C ++HP PL +P R G+ + C
Sbjct: 123 VLSSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHP----------PLQEIPCRIGKKLDC 172
Query: 178 SYYRIYGICKFGPTCKFDHP 197
G CK G C F+HP
Sbjct: 173 K----AGACKRGSNCPFNHP 188
>AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:10335910-10337854 FORWARD LENGTH=321
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 110 NPGESLSGGQAL--SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLG 167
NP + + + + SS P RP + +C++++ G C+Y S C+F+HP +R P
Sbjct: 35 NPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR-------PQE 87
Query: 168 LPVRPGQAICSY 179
LPVR IC +
Sbjct: 88 LPVR----ICKH 95