Miyakogusa Predicted Gene

Lj2g3v2843800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2843800.1 Non Chatacterized Hit- tr|I3T5F3|I3T5F3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.14,0,INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE,NULL; TRYPTOPHAN
BIOSYNTHESIS PROTEIN,NULL; no description,Aldo,CUFF.39346.1
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48220.1 | Symbols:  | Aldolase-type TIM barrel family protei...   525   e-149
AT5G48220.3 | Symbols:  | Aldolase-type TIM barrel family protei...   521   e-148
AT5G48220.2 | Symbols:  | Aldolase-type TIM barrel family protei...   511   e-145
AT2G04400.1 | Symbols:  | Aldolase-type TIM barrel family protei...   483   e-137

>AT5G48220.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:19549930-19552046 FORWARD LENGTH=379
          Length = 379

 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/383 (69%), Positives = 305/383 (79%), Gaps = 26/383 (6%)

Query: 9   APFQALHLSSPRPRTWIPPTHLNTSRQNSFFSMSVRAQ-VGSDEGSPTIATSSEPIAEVL 67
           +PF  LH +  RP ++ P                +RAQ  G  EGS +   +        
Sbjct: 21  SPFN-LHNTLTRPSSYAP----------------LRAQKSGITEGSDSALEA-------- 55

Query: 68  KVKEWEVGMFHNEVAASQXXXXXXXXXXXXXNHYVGPFQFRLQNEGNTPRNILEEIVWNK 127
           KV E EVGM+ NEV  SQ              HYVGPF+FRLQNEGNTPRNILEEIVW+K
Sbjct: 56  KVSEQEVGMYQNEVVESQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWHK 115

Query: 128 DKEVAYLKERKPLGMLNQALAGSPPARDFIGALRAANERSGLPALIAEVKKASPSRGILR 187
           DKEVA +KERKPL  L +AL   PPA+DFIGALR+A++R+GLP LIAEVKKASPSRGILR
Sbjct: 116 DKEVAQMKERKPLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIAEVKKASPSRGILR 175

Query: 188 EDFDPVEIAQSYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPLLCKEFIVDAWQL 247
           EDF+PVEIAQ+YEKGGAACLSVLTD+KYFKGS+ENL+AI  AGVKCPLL KEFIV+AWQ+
Sbjct: 176 EDFNPVEIAQAYEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCPLLLKEFIVEAWQI 235

Query: 248 YYARTKGADAVLLIAAVLPDLDIKYMLKICRLLGLTALVEVHDEREFDRVLGIEGVELIG 307
           YY R+KGADAVLLIA+VLPDLDIKYM+KIC++LG+  LVEVHDERE DRVL IEGVELIG
Sbjct: 236 YYGRSKGADAVLLIASVLPDLDIKYMIKICKILGMATLVEVHDEREMDRVLAIEGVELIG 295

Query: 308 INNRNLETFEVDISITKKLLEGERGKTIREKDIIIVGESGLFTPEDIAYVQEAGVKAVLV 367
           INNRNLETFEVD+ ITKKLLEGERG+ IR+KDI++VGESGLFTPEDIA+VQEAGVKAVLV
Sbjct: 296 INNRNLETFEVDLGITKKLLEGERGELIRQKDILVVGESGLFTPEDIAFVQEAGVKAVLV 355

Query: 368 GESLVKQSDPGKGISNLFGKDIS 390
           GESL+KQSDPGK IS LFG+D+S
Sbjct: 356 GESLIKQSDPGKAISTLFGRDVS 378


>AT5G48220.3 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:19550168-19552046 FORWARD LENGTH=364
          Length = 364

 Score =  521 bits (1343), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/323 (78%), Positives = 284/323 (87%)

Query: 68  KVKEWEVGMFHNEVAASQXXXXXXXXXXXXXNHYVGPFQFRLQNEGNTPRNILEEIVWNK 127
           KV E EVGM+ NEV  SQ              HYVGPF+FRLQNEGNTPRNILEEIVW+K
Sbjct: 41  KVSEQEVGMYQNEVVESQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWHK 100

Query: 128 DKEVAYLKERKPLGMLNQALAGSPPARDFIGALRAANERSGLPALIAEVKKASPSRGILR 187
           DKEVA +KERKPL  L +AL   PPA+DFIGALR+A++R+GLP LIAEVKKASPSRGILR
Sbjct: 101 DKEVAQMKERKPLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIAEVKKASPSRGILR 160

Query: 188 EDFDPVEIAQSYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPLLCKEFIVDAWQL 247
           EDF+PVEIAQ+YEKGGAACLSVLTD+KYFKGS+ENL+AI  AGVKCPLL KEFIV+AWQ+
Sbjct: 161 EDFNPVEIAQAYEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCPLLLKEFIVEAWQI 220

Query: 248 YYARTKGADAVLLIAAVLPDLDIKYMLKICRLLGLTALVEVHDEREFDRVLGIEGVELIG 307
           YY R+KGADAVLLIA+VLPDLDIKYM+KIC++LG+  LVEVHDERE DRVL IEGVELIG
Sbjct: 221 YYGRSKGADAVLLIASVLPDLDIKYMIKICKILGMATLVEVHDEREMDRVLAIEGVELIG 280

Query: 308 INNRNLETFEVDISITKKLLEGERGKTIREKDIIIVGESGLFTPEDIAYVQEAGVKAVLV 367
           INNRNLETFEVD+ ITKKLLEGERG+ IR+KDI++VGESGLFTPEDIA+VQEAGVKAVLV
Sbjct: 281 INNRNLETFEVDLGITKKLLEGERGELIRQKDILVVGESGLFTPEDIAFVQEAGVKAVLV 340

Query: 368 GESLVKQSDPGKGISNLFGKDIS 390
           GESL+KQSDPGK IS LFG+D+S
Sbjct: 341 GESLIKQSDPGKAISTLFGRDVS 363


>AT5G48220.2 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:19550439-19552046 FORWARD LENGTH=316
          Length = 316

 Score =  511 bits (1315), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/315 (78%), Positives = 278/315 (88%)

Query: 76  MFHNEVAASQXXXXXXXXXXXXXNHYVGPFQFRLQNEGNTPRNILEEIVWNKDKEVAYLK 135
           M+ NEV  SQ              HYVGPF+FRLQNEGNTPRNILEEIVW+KDKEVA +K
Sbjct: 1   MYQNEVVESQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWHKDKEVAQMK 60

Query: 136 ERKPLGMLNQALAGSPPARDFIGALRAANERSGLPALIAEVKKASPSRGILREDFDPVEI 195
           ERKPL  L +AL   PPA+DFIGALR+A++R+GLP LIAEVKKASPSRGILREDF+PVEI
Sbjct: 61  ERKPLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIAEVKKASPSRGILREDFNPVEI 120

Query: 196 AQSYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYARTKGA 255
           AQ+YEKGGAACLSVLTD+KYFKGS+ENL+AI  AGVKCPLL KEFIV+AWQ+YY R+KGA
Sbjct: 121 AQAYEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCPLLLKEFIVEAWQIYYGRSKGA 180

Query: 256 DAVLLIAAVLPDLDIKYMLKICRLLGLTALVEVHDEREFDRVLGIEGVELIGINNRNLET 315
           DAVLLIA+VLPDLDIKYM+KIC++LG+  LVEVHDERE DRVL IEGVELIGINNRNLET
Sbjct: 181 DAVLLIASVLPDLDIKYMIKICKILGMATLVEVHDEREMDRVLAIEGVELIGINNRNLET 240

Query: 316 FEVDISITKKLLEGERGKTIREKDIIIVGESGLFTPEDIAYVQEAGVKAVLVGESLVKQS 375
           FEVD+ ITKKLLEGERG+ IR+KDI++VGESGLFTPEDIA+VQEAGVKAVLVGESL+KQS
Sbjct: 241 FEVDLGITKKLLEGERGELIRQKDILVVGESGLFTPEDIAFVQEAGVKAVLVGESLIKQS 300

Query: 376 DPGKGISNLFGKDIS 390
           DPGK IS LFG+D+S
Sbjct: 301 DPGKAISTLFGRDVS 315


>AT2G04400.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr2:1531208-1533578 FORWARD LENGTH=402
          Length = 402

 Score =  483 bits (1244), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/395 (62%), Positives = 299/395 (75%), Gaps = 14/395 (3%)

Query: 10  PFQALHLSSPRPRTWIPPTHLNTSRQNSFFSM------------SVRAQVGSDEGSPTIA 57
           P Q L +    P  +     ++  R  S F+M            S+RAQ    + S  ++
Sbjct: 6   PVQRLPIKVASPSLYRCNNSVSIRRSISGFAMDRKINFRAPSQFSIRAQQSDLKESLAVS 65

Query: 58  TSS-EPIAEVLKVKEWEVGMFHNEVAASQXXXXXXXXXXXXXNHYVGPFQFRLQN-EGNT 115
           +SS E    VL++KEWEV M+  E+A SQ               Y GPF+ RL N + ++
Sbjct: 66  SSSVEDKGNVLRIKEWEVEMYQEELAISQGIRIRRKPPSKAPLGYSGPFELRLHNNDADS 125

Query: 116 PRNILEEIVWNKDKEVAYLKERKPLGMLNQALAGSPPARDFIGALRAANERSGLPALIAE 175
           PRNILEEI W KD EV+ +KE  PL +L +A+  +PP RDF+GALR A++R+G P LIAE
Sbjct: 126 PRNILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPGLIAE 185

Query: 176 VKKASPSRGILREDFDPVEIAQSYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPL 235
           VKKASPSRGIL+E+FDPVEIAQ+YEKGGAACLSVLTD+KYF+G FENLEAIR+AGVKCPL
Sbjct: 186 VKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPL 245

Query: 236 LCKEFIVDAWQLYYARTKGADAVLLIAAVLPDLDIKYMLKICRLLGLTALVEVHDEREFD 295
           LCKEF+VD WQ+YYARTKGADAVLLIAAVL DL+I ++LKIC+ L L ALVEVHDERE  
Sbjct: 246 LCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMG 305

Query: 296 RVLGIEGVELIGINNRNLETFEVDISITKKLLEGERGKTIREKDIIIVGESGLFTPEDIA 355
           RVLGIEG+EL+GINNR+LETFEVDIS TKKLLEGE G+ IRE+D+I+VGESGLFTP+DIA
Sbjct: 306 RVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIA 365

Query: 356 YVQEAGVKAVLVGESLVKQSDPGKGISNLFGKDIS 390
           YVQ AGVKAVLVGES+VKQ+DP KGI+ LFG++IS
Sbjct: 366 YVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNIS 400