Miyakogusa Predicted Gene

Lj2g3v2770090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2770090.1 Non Chatacterized Hit- tr|I1M7S5|I1M7S5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.81,0,PREDICTED:
SIMILAR TO TSG24,NULL; MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY
MEMBER,Anaphase-promotin,CUFF.39389.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05560.1 | Symbols: EMB2771 | E3 ubiquitin ligase, putative |...   359   1e-99

>AT5G05560.1 | Symbols: EMB2771 | E3 ubiquitin ligase, putative |
            chr5:1641452-1654685 FORWARD LENGTH=1678
          Length = 1678

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 184/308 (59%), Positives = 217/308 (70%), Gaps = 31/308 (10%)

Query: 11   KDIETPTNVNVISMSTPYMLNLHPVSSTISDAIGFEGTKFEXXXXXXXXXXXXMEHIFNS 70
            K+ E  +N ++ISMS PYML+LHPV    S++IG E TK E            MEHIFNS
Sbjct: 792  KEFEMQSNTSLISMSIPYMLHLHPVIVPSSESIGLENTKIEDTNSVDGSVIDGMEHIFNS 851

Query: 71   STQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQAQLWHLAQRTTSLPLGRG 130
             TQLRYGRDLRLNEVRRLLCS+RPV +QT+ N + SDQ+ QQA                 
Sbjct: 852  YTQLRYGRDLRLNEVRRLLCSARPVVVQTAANPTISDQEQQQA----------------- 894

Query: 131  AFTLATIHTLLTEAFIVPKLVLAGRLPAQQNATVNLDPNIRNIQELRSWPEFHNAVAAGL 190
                          F VPKLVLAGRLP+QQNA VNLDPNIRNIQEL++WPEFHNAVAAGL
Sbjct: 895  --------------FTVPKLVLAGRLPSQQNAIVNLDPNIRNIQELKTWPEFHNAVAAGL 940

Query: 191  RLAPFQGRMSRTWIIYNKPEEPNSXXXXXXXXXXXXXYLRVLTITDIYQYLYQEHESTTV 250
            RLAP QG++SRTWI YNKP EPN+             YL VL ++DIYQY  Q+HESTTV
Sbjct: 941  RLAPLQGKVSRTWIRYNKPGEPNAVHAGLLFGLGLQGYLHVLNLSDIYQYFTQDHESTTV 1000

Query: 251  GLMLGLAASYRGTMQPTISKSLCVHIPVRHPSSYPELEVPTLLQSAALMSLGILYEGSAN 310
            GLMLGLAASYRGTMQP I+K+L  H+P R+ +SY E E+PTLLQSAAL+S+G+L+EGSA+
Sbjct: 1001 GLMLGLAASYRGTMQPDIAKALFFHVPARYQASYTEFEIPTLLQSAALVSVGMLFEGSAH 1060

Query: 311  PQTMQVLL 318
             QTMQ+LL
Sbjct: 1061 QQTMQLLL 1068