Miyakogusa Predicted Gene

Lj2g3v2760040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2760040.1 tr|G7K258|G7K258_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_5g082890
PE=,82.76,0,Apc1,Anaphase-promoting complex subunit 1; seg,NULL;
PREDICTED: SIMILAR TO TSG24,NULL; MEIOTIC CHECK,CUFF.39384.1
         (754 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05560.1 | Symbols: EMB2771 | E3 ubiquitin ligase, putative |...   733   0.0  

>AT5G05560.1 | Symbols: EMB2771 | E3 ubiquitin ligase, putative |
           chr5:1641452-1654685 FORWARD LENGTH=1678
          Length = 1678

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/772 (52%), Positives = 514/772 (66%), Gaps = 36/772 (4%)

Query: 1   MSIGERRLSLLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPEIXXXXXXXXXXXXVAS 60
           M  G R+L++LG+FKPFGLIAEA DGK PD   D Y YFLFDPE+              +
Sbjct: 1   MPPGVRQLTVLGKFKPFGLIAEATDGKSPD---DSYQYFLFDPELTGERDDADGND---A 54

Query: 61  ALNNRGDHELFIRGNRIIWSIGARVFKRFTLPHPIVKVCWCHLGHTAEALLCVLQNKCLM 120
             + + +HELFIR N  +    A V   F         CW +LG   EA LCVLQ  CL 
Sbjct: 55  NFSRQREHELFIRDNCNVRKGYALVEANFI--GYWYNACWSNLGRGTEAFLCVLQIACLT 112

Query: 121 IYNTSGEIVSLPLPRTITSIWPLPFGLLLQQEVEATTPSRIPFSSTSPLFSARDILL--- 177
           IYNTSGE+VS+PL RT+ SIWPLP GLLL+Q  E   PS +PFS  SP+  +R++L    
Sbjct: 113 IYNTSGEVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLRQRK 172

Query: 178 -----------SSSGH--IQKGEGSLVSSHLILMDPLDEEQPTFIQERGKLNVMKEYDEK 224
                      S   H  I K +   +SSHLIL DPL+E  PT+++ERGKL +MK+YDE+
Sbjct: 173 EVGNSSPQNFHSPVAHDLISKRDMPCMSSHLILRDPLEEPGPTYVEERGKLTIMKDYDER 232

Query: 225 TIWTSDLVPLMASYNKGKMQHSLWVAEIVNYNFDEAATSSLNINPMGVLPKHLSFRRIWQ 284
           TIWTSD +PLM SYNKGKMQHS+W AE +  N + +A+ S  I P  VL K +SFRRIWQ
Sbjct: 233 TIWTSDRLPLMTSYNKGKMQHSVWAAEFIESNLEASASCSSGIVPDAVLSKRVSFRRIWQ 292

Query: 285 GKGSQTAACKVFMATDDDTAPIVCFFHQEQKKMLSVSLQSVEINSEIVFDVKPDTSWIIA 344
            KG++ AA KVF+ATD+ + P++CF   EQKK+LSV LQ+VEIN+EI+FDVKPD SW ++
Sbjct: 293 AKGAKKAASKVFLATDN-SVPVICFLILEQKKLLSVGLQTVEINNEILFDVKPDISWSVS 351

Query: 345 AVAASPVTVTRPRVKVGLLPYSDILVLTPENVLLLYSGKQCLCRYVLPSCLNKDKILHDW 404
           A+AA+PV VTR +VK+GLLP+ DI+VL+PEN L LYSGKQCLCRYVLPS L +     D 
Sbjct: 352 AIAAAPVVVTRSQVKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESIGSGDG 411

Query: 405 KLPETSSVPMDLKITGLADAVEGRXXXXXXXRQMFRCALRQSPSSSLANDCITALADGLS 464
           +  +T S   +LKITGL+DAV G         Q+FRCAL   PSSSLANDCI A+A+GL 
Sbjct: 412 ESAKTDSGFRNLKITGLSDAVLGSINLSVNHSQIFRCALTGKPSSSLANDCIAAIAEGLR 471

Query: 465 SSFYRHFIGLLWKNDDPADLSETESSVDSEWGSFCHVIMQICGKYNIISQKRSGPVSHSA 524
           S  Y  F+ LLW  D  +DL    SS+  EW + C++ ++IC K  ++ +K+    S S+
Sbjct: 472 SDLYSLFLSLLW-GDGHSDLQG--SSIHFEWEALCNIFLEICQKPTVVHRKQPKTASESS 528

Query: 525 WDFLLSSQFHNNFCKVNSMFGVSCAAPLNQLESNPPKSSIDGKQSSEKPFYN--ELLMES 582
           W+FLL S+FH  + + ++  G++    L+ LE   P    D K  SE+   +  EL+++S
Sbjct: 529 WEFLLISKFHKTYSRFHN--GITSINRLD-LEGIVP---FDSKICSEETLGSSCELMVQS 582

Query: 583 LESLHALYESLKLDSLRKRDLELLAILLCNMADFLGENNYMDHYIRDFPGLCKKFQMSGT 642
           L+ LHA+YESLK+D+LRK+DL  LA+LLCN+A FL E  Y+D+YIRDFP L        T
Sbjct: 583 LDCLHAVYESLKMDNLRKQDLHHLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGACTT 642

Query: 643 TLSLKISPSLFRWLENCLQHGWSCANISDLPSLVLKDGCSVVSLARKIVCFYSILSGANL 702
             S +  P+LFRWLENCL+ G    N  DLP L+ +DGCS+VS ARK+V FYS+L G   
Sbjct: 643 LSSSRKPPNLFRWLENCLRRGCLSTNFDDLPDLIRRDGCSIVSWARKVVSFYSVLFGDKP 702

Query: 703 LGKKLSSGVYCNIATGSHSSKEELTMLAMVGERFGLQQLDSLPSGVSLPLRH 754
            G+ LSSGV CNIA GS+S  EELT+LAM GERFGL QLD LPSGVSLPLRH
Sbjct: 703 EGRTLSSGVPCNIAPGSYSCNEELTILAMAGERFGLHQLDLLPSGVSLPLRH 754