Miyakogusa Predicted Gene

Lj2g3v2724460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2724460.1 Non Chatacterized Hit- tr|I3SCE1|I3SCE1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,81.82,0.00000000000003,Hs1pro-1_N,Hs1pro-1, N-terminal;
Hs1pro-1_C,Hs1pro-1, C-terminal; seg,NULL,CUFF.39224.1
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40000.1 | Symbols: HSPRO2, ATHSPRO2 | ortholog of sugar beet...   195   3e-50
AT3G55840.1 | Symbols:  | Hs1pro-1 protein | chr3:20717530-20718...   167   4e-42

>AT2G40000.1 | Symbols: HSPRO2, ATHSPRO2 | ortholog of sugar beet
           HS1 PRO-1 2 | chr2:16700649-16701956 REVERSE LENGTH=435
          Length = 435

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 97/189 (51%), Positives = 124/189 (65%), Gaps = 10/189 (5%)

Query: 45  ISAAAPPLCAAYDHYLRLPELRTLWNARDFPNWTNEPILKPALQALEITFGLFSTVLSDP 104
           IS +AP LC+AY+ YLRLPELR LW++RDFP WT+EPILKPALQALEI+F L   V SD 
Sbjct: 42  ISCSAPALCSAYELYLRLPELRKLWSSRDFPQWTSEPILKPALQALEISFRLVFAVCSDT 101

Query: 105 RPYANRREWNRRVESLATRQXXXXXXXXXXXXXNPDTRGTAPTADLXXXXXXXXXXXXXX 164
           RPY N REWNRR++SL T+Q             + +  G +  A +              
Sbjct: 102 RPYINHREWNRRLDSLITKQ----IQLVAAICEDEEEEGISAEAPV------GGGRSSLS 151

Query: 165 LLPRLATWYRSKDAAQRILLSVECQMRRCPYTLGLGEPNLAAKPSLMYDAVCRPNEVHEL 224
           LLP+LATW RS+   ++IL +++ +M RC YTLGLGE N+A KP+L YDA+CRPNE++ L
Sbjct: 152 LLPQLATWRRSEALGKKILYTIDNEMSRCKYTLGLGEQNIAGKPNLRYDAICRPNEIYSL 211

Query: 225 KTTPYDDRT 233
           K  PY D  
Sbjct: 212 KDNPYADHI 220


>AT3G55840.1 | Symbols:  | Hs1pro-1 protein | chr3:20717530-20718816
           REVERSE LENGTH=428
          Length = 428

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 88/180 (48%), Positives = 107/180 (59%), Gaps = 9/180 (5%)

Query: 56  YDHYLRLPELRTLWNARDFPNWTNEPILKPALQALEITFGLFSTVLSDPRPYANRREWNR 115
           Y+ YLRLPELR LW++  FP+W +EP+LKPALQALEITF L  TV SD RPY NRREW R
Sbjct: 43  YELYLRLPELRNLWSSLYFPHWISEPVLKPALQALEITFRLILTVASDTRPYINRREWIR 102

Query: 116 RVESLATRQXXXXXXXXXXXXXNPDTRGTAPTADLXXXXXXXXXXXXXXLLPRLATWYRS 175
           R++SL T Q               +    AP ++               LL  +AT   S
Sbjct: 103 RLDSLTTSQIKIVAAICGDEDNYEENVSAAPVSN---------GWSSLSLLSEIATCRTS 153

Query: 176 KDAAQRILLSVECQMRRCPYTLGLGEPNLAAKPSLMYDAVCRPNEVHELKTTPYDDRTRS 235
           +   Q+IL ++E +MR C YTLGLGEPNLA KP L YDAVC P E+H LK  PY D   +
Sbjct: 154 ESVGQKILSTIENEMRWCKYTLGLGEPNLAGKPYLQYDAVCLPEELHSLKNNPYADHIEN 213