Miyakogusa Predicted Gene

Lj2g3v2660400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2660400.1 tr|G7JL95|G7JL95_MEDTR DEM2 OS=Medicago
truncatula GN=MTR_4g086240 PE=4 SV=1,81.59,0,seg,NULL; FAMILY NOT
NAMED,NULL; Putative isomerase YbhE,NULL; VID27,Vacuolar
import/degradation, Vi,CUFF.39174.1
         (631 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19240.1 | Symbols:  | Vacuolar import/degradation, Vid27-rel...   831   0.0  
AT4G33400.1 | Symbols:  | Vacuolar import/degradation, Vid27-rel...   739   0.0  

>AT3G19240.1 | Symbols:  | Vacuolar import/degradation,
           Vid27-related protein | chr3:6664383-6666423 FORWARD
           LENGTH=648
          Length = 648

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/605 (68%), Positives = 471/605 (77%), Gaps = 35/605 (5%)

Query: 40  EVDAKLKALKLKYXXXXXXXXXXXXXKTQTPLTRNAVKLYLHIGGNTPNAKWILSDKRTF 99
           +++ KLKALKLKY              + TP  +NAVKLY HIGGNTP AKWI+SDK T 
Sbjct: 63  DIEQKLKALKLKYPSSS----------SVTPKMKNAVKLYRHIGGNTPKAKWIVSDKMTS 112

Query: 100 YKFIKSXXXXXXXXXXXX---------XXYWFLKVGSKVRARVSTEMQLKMFGDQRRVDF 150
           YKF+K+                       +WFL VG+KV+ARVST+MQLKMFGDQRRVDF
Sbjct: 113 YKFVKTSSVDGEDIDDYDDCEESGEGGESFWFLGVGTKVKARVSTDMQLKMFGDQRRVDF 172

Query: 151 VSDGVWALKFLTDEFYRRFVTEFQDCMFENVYGLAATEENKLKVYGKEFIGWVKPEAADD 210
           VS+GVWALKFLTDE YR+FVT FQD +FENVY + A+EEN++KVYGK+FIGW  PEAADD
Sbjct: 173 VSNGVWALKFLTDEDYRKFVTRFQDYLFENVYKIRASEENRVKVYGKDFIGWANPEAADD 232

Query: 211 SVWEDAVSDEXXXXXXXXXXKTPERPRGDLMEEFEEAANGGVHTVTLGALDNSFLVNDTG 270
           S+WEDA +            +T  +   DL EEFEE ANGGV ++TLGALDNSFLVND G
Sbjct: 233 SMWEDAEA-------PPEEEETQGKRNTDLTEEFEEVANGGVQSLTLGALDNSFLVNDYG 285

Query: 271 VRVYRNFDRGIQDKGVAVKFGGGGSLRGT----TTPNKALLMRAETNMMLMSPLNSGKPH 326
           V+VYRN +RGI  KGV V+F  G S  G+    TTPNKALLMRAETNMMLMSP   GKP+
Sbjct: 286 VQVYRNMERGIHGKGVCVRFDSGNSKFGSGSSQTTPNKALLMRAETNMMLMSPAKQGKPN 345

Query: 327 ASRLHQMDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWD 386
           ++ + Q+DIE+GKIVTEWKFEKDG +ITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWD
Sbjct: 346 STGVKQLDIESGKIVTEWKFEKDGTEITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWD 405

Query: 387 MREKKGMVQNIAGSGSPVLHWSQGHQFSRGTNFQCFATTXXXXXXXXXXXXKIRLYSKTS 446
           MR+++G+VQNI    SP+L W+QGHQFSRGTNFQCFATT            KIRLYSKTS
Sbjct: 406 MRDRRGIVQNID---SPILEWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTS 462

Query: 447 MRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLXXXXXXXXXXXXXXRMGNK 506
           MRMAKTAFPGLGSPIT VDV++DGKW+LGTTDTYLVLICTL              RMGNK
Sbjct: 463 MRMAKTAFPGLGSPITHVDVSYDGKWILGTTDTYLVLICTLFTDKNGLTKTGFSGRMGNK 522

Query: 507 IGAPRLLKLTPLDSHLAGTGNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNS 566
           I APRLLKLTPLDSHLAG  NKFHGGHFSWVTE+GKQERH+VATVGKFSVIWD ++VKNS
Sbjct: 523 IPAPRLLKLTPLDSHLAGKDNKFHGGHFSWVTESGKQERHIVATVGKFSVIWDLERVKNS 582

Query: 567 AHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDNFAVS--DSPEAPLVVATPMKVSSIS 624
           AHECYRNQQGLKSCYCYKI+LKDESIVESRFMHDNF+ S   SPEAPLVVATP+KVSSIS
Sbjct: 583 AHECYRNQQGLKSCYCYKILLKDESIVESRFMHDNFSFSGNKSPEAPLVVATPLKVSSIS 642

Query: 625 MSGKR 629
           +SGKR
Sbjct: 643 LSGKR 647


>AT4G33400.1 | Symbols:  | Vacuolar import/degradation,
           Vid27-related protein | chr4:16078189-16080410 REVERSE
           LENGTH=645
          Length = 645

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/605 (58%), Positives = 441/605 (72%), Gaps = 20/605 (3%)

Query: 31  QPSIPNQ-LDEVDAKLKALKLKYXXXXXXXXXXXXXKTQTPLTRNAVKLYLHIGGNTPNA 89
           +P  P+  LD+V+AKL+ALKLKY                 P T+N+ +L+ +I GNTP A
Sbjct: 55  RPKSPSSSLDDVEAKLQALKLKYPLTQ-----------SAPSTQNSARLFRYINGNTPKA 103

Query: 90  KWILSDKRTFYKFIKSXXXXXXXXXXX-----XXXYWFLKVGSKVRARVSTEMQLKMFGD 144
           KW+ ++K T Y F+K+                   +W LKVGSK+R +VS EMQLK + D
Sbjct: 104 KWVTAEKLTAYCFVKTNKGDEDDEDDDENGDVENEWWILKVGSKIREKVSDEMQLKAYKD 163

Query: 145 QRRVDFVSDGVWALKFLTDEFYRRFVTEFQDCMFENVYGLAATEENKLKVYGKEFIGWVK 204
           QRRVDFV+  VWA+KF + E +  FV+ + +C+FEN +G+   E NK K+YGK+FIGW  
Sbjct: 164 QRRVDFVAKAVWAMKFASSEDFSVFVSSYNNCLFENNHGVEFNEANKAKIYGKDFIGWAN 223

Query: 205 PEAADDSVWEDAVSDEXXXXXXXXXXKTPERPRGDLMEEFEEAANGGVHTVTLGALDNSF 264
           PEAADDS+WEDA  D+           TP R   DL E FEEA + G+H++ LGALDNSF
Sbjct: 224 PEAADDSMWEDA--DDILLQSPGGGSATPARDTQDLTEAFEEATSEGIHSLALGALDNSF 281

Query: 265 LVNDTGVRVYRNFDRGIQDKGVAVKFGGGGSLRGTTTPNKALLMRAETNMMLMSPLNSGK 324
           LV D+G++V++N  +GIQ KGV V F  G     ++ P KALLMRAETNM+LMSP+ S  
Sbjct: 282 LVGDSGIQVFKNMRQGIQGKGVCVNFEPGYGRTHSSAPKKALLMRAETNMLLMSPM-SQT 340

Query: 325 PHASRLHQMDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQ 384
           PH+  +HQ+DIETGKI++EWKFEKDG DI+M DITND KG+QLDPS STFLGLD+NRLC+
Sbjct: 341 PHSRGIHQLDIETGKIISEWKFEKDGVDISMSDITNDGKGAQLDPSASTFLGLDNNRLCR 400

Query: 385 WDMREKKGMVQNIAGSGSPVLHWSQGHQFSRGTNFQCFATTXXXXXXXXXXXXKIRLYSK 444
           WDMR++ GMVQ++A + +PVL+W+QGHQFSRGTNFQCFATT            KIRLYS 
Sbjct: 401 WDMRDRYGMVQDLATANTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSS 460

Query: 445 TSMRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLXXXXXXXXXXXXXXRMG 504
            +MR AKTAFPGLG+P+T VD TFDGKW++GTTDTYL++ICTL              RMG
Sbjct: 461 NTMRQAKTAFPGLGAPVTHVDATFDGKWIVGTTDTYLIVICTLFTDKSGKTKTGFEGRMG 520

Query: 505 NKIGAPRLLKLTPLDSHLAGTGNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVK 564
           NKI APRLLKL PLD+HLAG+ NKF    FSWVTE+GKQERH+VATVGKFSVIW+FQQVK
Sbjct: 521 NKIAAPRLLKLRPLDAHLAGSDNKFRNAQFSWVTEDGKQERHVVATVGKFSVIWNFQQVK 580

Query: 565 NSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDNFAVSDSPEAPLVVATPMKVSSIS 624
           N +HECY +Q+GLK CYCYKIVL++ESIV+SRFM+DNFA+S SPEAPLV+ATPMKVSS S
Sbjct: 581 NGSHECYHDQEGLKKCYCYKIVLRNESIVDSRFMNDNFAISGSPEAPLVIATPMKVSSFS 640

Query: 625 MSGKR 629
           +S KR
Sbjct: 641 LSSKR 645