Miyakogusa Predicted Gene

Lj2g3v2658300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2658300.1 tr|D7KDK7|D7KDK7_ARALL Mitochondrial glycoprotein
family protein OS=Arabidopsis lyrata subsp. lyrata,33.66,7e-19,no
description,Mitochondrial glycoprotein; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; MAM33,Mi,CUFF.39163.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family prot...   197   6e-51
AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family prot...   195   2e-50
AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family prot...   182   2e-46
AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family prot...   178   3e-45
AT2G39790.1 | Symbols:  | Mitochondrial glycoprotein family prot...   122   3e-28
AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family prot...    89   4e-18
AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family prot...    88   7e-18
AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family prot...    70   1e-12
AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    70   1e-12

>AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr3:20622668-20623889 FORWARD LENGTH=258
          Length = 258

 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/272 (43%), Positives = 162/272 (59%), Gaps = 32/272 (11%)

Query: 1   MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPR-------- 52
           M F   +R+S+  L S       + + Q     A+ A VN+      S+VP+        
Sbjct: 1   MGFALCIRRSASTLASVCGR---VARAQ-----AVSAIVNR-----SSLVPKPSLLRPFV 47

Query: 53  ---FHFSSVAVKNKPTSDETLLRVIESEITCAEETDDHSAEEDL--PKNFPFKIVDNPGN 107
              F +S+     K  SD+TL++VI+SEI  + E DDH A+E+     +FPFKI DNPG+
Sbjct: 48  SRGFPYSTATEPLK--SDQTLIQVIDSEIKDSFEADDHDADEETIDSSDFPFKIEDNPGH 105

Query: 108 QTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXXXXS---ERAXXXXXXXXXXXXKKG 164
           +T+TL R Y GE+IKV+V MP L                   E++            KK 
Sbjct: 106 RTVTLTREYNGEQIKVEVSMPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTKKS 165

Query: 165 GPFLEFSCMAYSDEIVIDSLSVKNPE-LSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGI 223
           G  LEFSC A+ DEIVID LSV  P+  SE+Q+ Y+GPDFQ+LDE+++KSFHK+LE RGI
Sbjct: 166 GLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGI 225

Query: 224 KPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
           K S T+FL+EYM+ KDS+EYL+WLKK+K+F+Q
Sbjct: 226 KASATDFLYEYMMKKDSREYLLWLKKLKTFVQ 257


>AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:16597026-16598028 FORWARD LENGTH=250
          Length = 250

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/233 (47%), Positives = 151/233 (64%), Gaps = 11/233 (4%)

Query: 30  GHRAALFAAVNQ--LHRHQDSVVP---RFHFSSVAVKNKPTSDETLLRVIESEITCAEET 84
           G   ++ A  N+  L R+  S+ P   R    S A+ ++ +S++TL+RVI+SEI  A ++
Sbjct: 21  GRVRSISAVANRASLARNPSSIRPFVSRALNYSTAI-DRISSEQTLIRVIDSEINSALQS 79

Query: 85  DDHSAEEDL-PKNFPFKIVDNPGNQTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXX 143
           D+  ++E++ P +FPF+I D PGNQ +TL R Y GE IKV V MP LV+           
Sbjct: 80  DNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYNGEHIKVVVSMPSLVSDENDDDDDDDE 139

Query: 144 XXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSVKNPELS-EDQIAYEGPD 202
             S  +            KK G  LEFSCMA+ DEI ID+LSVK+P  S EDQ+A EGPD
Sbjct: 140 GPSNESSIPLVVTVT---KKSGLTLEFSCMAFPDEIAIDALSVKHPGDSLEDQLANEGPD 196

Query: 203 FQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
           F+DLDE+L+K+F+K+LEIRG+K STTNFLHEYM  K ++EY +WLK VK F++
Sbjct: 197 FEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKEFME 249


>AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:403239-404244 REVERSE LENGTH=267
          Length = 267

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 152/266 (57%), Gaps = 11/266 (4%)

Query: 1   MAFNSILRKSSPLLRSFA-AAGQLIKKTQPGHRAA--LFAAVNQLHRHQDSVVPRFHFSS 57
           MA +++ R++S  + + A  AG+     + G  +   L    +Q+ R   S      FS+
Sbjct: 1   MALSTVFRRASSTVANLAFRAGRSPVSFRSGAVSVERLIRGSHQIRRGSVSSFSVSSFST 60

Query: 58  VAVKNKPTSDETLLRVIESEITCA---EETDDHSAEEDLPKNFPFKIVDNPGNQTITLER 114
            +  +K T+DE L+ VIESEI CA   E   D    ED P+ FPF+I+DN G +T+ L R
Sbjct: 61  ESAISKTTADENLVSVIESEIECAVAEEAPHDTDFLEDKPEGFPFEIIDNSGERTVLLTR 120

Query: 115 TYQGEEIKVQVD-----MPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLE 169
            ++ E I+V+VD       +                 E +            K  G  LE
Sbjct: 121 KFEDETIQVEVDSVASYDDEDEEEEAEPNNEEDDEDQESSGKVRVPMVVSVQKGDGVCLE 180

Query: 170 FSCMAYSDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTN 229
           F   AY DEIVIDSLS+K P+ S++ +AYEGPDF DLDE+LQK+FH+YLEIRGIKPS T 
Sbjct: 181 FGVSAYPDEIVIDSLSIKQPQGSDNDLAYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTT 240

Query: 230 FLHEYMINKDSKEYLVWLKKVKSFIQ 255
           FL +Y+ NKDS+EYL WLK +KSF++
Sbjct: 241 FLADYVANKDSREYLQWLKDLKSFVE 266


>AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:1806911-1807895 REVERSE LENGTH=259
          Length = 259

 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 139/240 (57%), Gaps = 15/240 (6%)

Query: 31  HRAALFAAVNQ----LHRHQDSVVPRFHFSSVAVKNKPTSDETLLRVIESEITCAEETDD 86
           +R+ +++ ++Q      RH    V R    + + K + +  + LLR+IE EI  AE+ DD
Sbjct: 19  NRSFVYSLLDQSASGRRRHLTPSVDRNVPFTTSTKKRASPTDPLLRIIEEEIGYAEKADD 78

Query: 87  HSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXXXXS 146
           +   E+ P  FPF++ D PG + +TL R Y+GE +KV+V M +LVT              
Sbjct: 79  YHRVEETPSGFPFEMEDKPGGKIVTLTREYEGETVKVEVHMTNLVTGDKEDDEDDEEEAE 138

Query: 147 E----------RAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSVKNPE-LSEDQ 195
                      +             KK GP LEF C A+ D I I  + V  P+  S+D+
Sbjct: 139 NEEDEDEDKPLKPKQSNVPLLVTLSKKTGPSLEFRCTAFPDRIAIKDMWVTFPDDPSKDE 198

Query: 196 IAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
           +AYEGP F+ LDE L+K+FH+Y+EIRGIKPS  NFLHEYMINKDS+E+L+WLK +K+F++
Sbjct: 199 LAYEGPSFRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFVK 258


>AT2G39790.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:16594833-16595800 FORWARD LENGTH=240
          Length = 240

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 134/257 (52%), Gaps = 18/257 (7%)

Query: 1   MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAV 60
           MAF   +R+S+  L S  A GQ    +   +R +L    + L       V R    ++AV
Sbjct: 1   MAFAWCVRRSASKLAS--ACGQARSISAVVNRPSLALNPSPL----SPFVSRGFLYTMAV 54

Query: 61  KNKPTSDETLLRVIESEITCAEETDDHSAEEDL-PKNFPFKIVDNPGNQTITLERTYQGE 119
            +K +S++TL  VI+SE+  A +TDD +  E++ P +FP KI D PG+Q++TL   Y  E
Sbjct: 55  -DKLSSEQTLHLVIDSELNSALQTDDPNLNEEMAPGSFPLKIRDKPGDQSVTLTAYYNDE 113

Query: 120 EIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEI 179
            I V V MP L               S               KK G  +EF+C AY+D I
Sbjct: 114 RIHVDVGMPYLGDDVIDVFGPNNDELS-------FPLVVTVIKKNGVSIEFTCQAYADYI 166

Query: 180 VIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKD 239
            +  L+V + +    +  +  P F++LD++L+K+FH+YL  R +  + T  LH+YM++K 
Sbjct: 167 DLTDLTVHDYQYQMGETDW--PRFKNLDDNLKKAFHRYLATR-LDANITKLLHKYMVSKI 223

Query: 240 SKEYLVWLKKVKSFIQA 256
            +EYL+WLK V  F+  
Sbjct: 224 KREYLLWLKNVNKFVDG 240


>AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:30336289-30337347 FORWARD LENGTH=190
          Length = 190

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 13/189 (6%)

Query: 70  LLRVIESEITCAEETDDHSAEEDLPKNF-PFKIVDNPGNQTITLERTY-QGEEIKVQVDM 127
           +LR+I +EI   E   DHS     P +F PF + + PG Q I+L+R +   E+IK++  M
Sbjct: 10  ILRLIRNEI---EYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATM 66

Query: 128 PDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGP-FLEFSCMAYSDEIVIDSLSV 186
            D                +E              K G    LE  C A+ D I I  L +
Sbjct: 67  FD------RSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCI 120

Query: 187 KNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYLVW 246
           +   ++    +Y GP+F++LD+ LQ + +++LE RGI      FLH YM NK   EY+ W
Sbjct: 121 RRG-INTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRW 179

Query: 247 LKKVKSFIQ 255
           ++ VKS+++
Sbjct: 180 MESVKSYVE 188


>AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:5457153-5458245 FORWARD LENGTH=242
          Length = 242

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%)

Query: 56  SSVAVKNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNF-PFKIVDNPGNQTITLER 114
           S V+   +   +  +LR+I  EI   +   DHS      ++F PF + + PG Q I+L R
Sbjct: 48  SYVSEMRRTAFEGNILRLIRLEI---QSELDHSPILQPEESFGPFTVDERPGEQWISLRR 104

Query: 115 TY-QGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKG-GPFLEFSC 172
            + + E+IK++  M D                S+               KG G  LE  C
Sbjct: 105 KFGEKEDIKIEATMFD------GSVPSSKSTTSDPEDVQLHITFIVNISKGDGETLEIMC 158

Query: 173 MAYSDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLH 232
            A+ D I I    V+    +    AY GP+FQ++++ LQ S +++LE RGI      FLH
Sbjct: 159 SAWPDTIQITKFFVRKSSQNSPN-AYIGPEFQEMEDELQDSVYRFLEERGISDDLAEFLH 217

Query: 233 EYMINKDSKEYLVWLKKVKSFIQ 255
           +YM NKD  EY+ W++ VKS+++
Sbjct: 218 QYMKNKDKAEYIRWMETVKSYVE 240


>AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15449710-15450804 REVERSE LENGTH=234
          Length = 234

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 15/191 (7%)

Query: 69  TLLRVIESEITCAEETDDHSAEEDLPKNF-PFKIVDNPGNQTITLERTY-QGEEIKVQVD 126
            +LR+I +EI   E   D++        F  F + D PG Q I ++  + + E+IK++  
Sbjct: 52  NILRIIRNEI---EYQSDYAPPHQPATEFKSFSVEDCPGEQCIVMKGKFGEDEDIKMEAT 108

Query: 127 MPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSV 186
           M D                                  G   +EF C  + + I I  L  
Sbjct: 109 MFD---GFMNVPRAGLDASGHDVRLHISLLVDISKVDGSEEIEFLCSVWPNRIEIRKLY- 164

Query: 187 KNPELSEDQIA---YEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEY 243
              +L  ++I    Y GP+F +L    Q +  ++L +RGI      FLHEYM+NKD  E 
Sbjct: 165 ---KLRRNKITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHEYMMNKDRIEL 221

Query: 244 LVWLKKVKSFI 254
           + WL+K+ SFI
Sbjct: 222 IQWLRKLNSFI 232


>AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15726429-15727864 REVERSE LENGTH=227
          Length = 227

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 168 LEFSCMAYSDEIVIDSLSVKNP----ELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGI 223
           L F C  Y D + I S+S++      E+S+D   Y GP F++LDE ++  FH +LE RG+
Sbjct: 127 LHFLCGLYPDALGIHSVSMRPKLEALEMSDDPTQYTGPSFEELDEKMRDVFHGFLEERGV 186

Query: 224 KPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
             S   FL  ++  KD +  L W K V +F+ 
Sbjct: 187 NESLFPFLQAWLYVKDHRNLLRWFKSVGTFVH 218