Miyakogusa Predicted Gene

Lj2g3v2614070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2614070.1 Non Chatacterized Hit- tr|I1M841|I1M841_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10987 PE,84.05,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; AAA,ATPase, AAA-type,CUFF.40151.1
         (420 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39730.3 | Symbols: RCA | rubisco activase | chr2:16571174-16...   676   0.0  
AT2G39730.2 | Symbols: RCA | rubisco activase | chr2:16571046-16...   675   0.0  
AT2G39730.1 | Symbols: RCA | rubisco activase | chr2:16570951-16...   674   0.0  
AT1G73110.1 | Symbols:  | P-loop containing nucleoside triphosph...   311   4e-85

>AT2G39730.3 | Symbols: RCA | rubisco activase |
           chr2:16571174-16573345 REVERSE LENGTH=441
          Length = 441

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/437 (75%), Positives = 363/437 (83%), Gaps = 19/437 (4%)

Query: 1   MAASVSTIGTV-KTPLSLNXXXXXXXXXXXXXXXXXLKKVISRLPNT-KVSNGSFKIVAA 58
           MAA+VST+G + + PLSLN                     +SR   + K SNGSFK++A 
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA- 59

Query: 59  EIDESKQTDGDRWRGLAYDISDDQQDITRGKGMVDPLFQAPQNAGTHYAVMSSYEYISTG 118
            + E KQTDGDRWRGLAYD SDDQQDITRGKGMVD +FQAP   GTH+AV+SSYEY+S G
Sbjct: 60  -VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 118

Query: 119 LRQYNFDNTEGGFYIAPAFMDKLIVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178
           LRQYN DN   GFYIAPAFMDKL+VHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178

Query: 179 FQKMGINPIMMSAGELESGNAGEPAKLIRQR---------------LFINDLDAGAGRMG 223
             KMGINPIMMSAGELESGNAGEPAKLIRQR               LFINDLDAGAGRMG
Sbjct: 179 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 238

Query: 224 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDG 283
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKE+N RVPI+ TGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 298

Query: 284 RMEKFYWAPTREDRIGVCKGIFQTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVR 343
           RMEKFYWAPTREDRIGVCKGIF+TD + +E +VT+VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 344 KWISGVGVDLIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLN 403
           K++  +GV+ IGK+LVNS+EGPPVFEQP+MT EKL+EYGNMLV EQENVKRVQLA+ YL+
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418

Query: 404 EAALGNANDDAIKRGTF 420
           +AALG+AN DAI RGTF
Sbjct: 419 QAALGDANADAIGRGTF 435


>AT2G39730.2 | Symbols: RCA | rubisco activase |
           chr2:16571046-16573345 REVERSE LENGTH=446
          Length = 446

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/437 (75%), Positives = 363/437 (83%), Gaps = 19/437 (4%)

Query: 1   MAASVSTIGTV-KTPLSLNXXXXXXXXXXXXXXXXXLKKVISRLPNT-KVSNGSFKIVAA 58
           MAA+VST+G + + PLSLN                     +SR   + K SNGSFK++A 
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA- 59

Query: 59  EIDESKQTDGDRWRGLAYDISDDQQDITRGKGMVDPLFQAPQNAGTHYAVMSSYEYISTG 118
            + E KQTDGDRWRGLAYD SDDQQDITRGKGMVD +FQAP   GTH+AV+SSYEY+S G
Sbjct: 60  -VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 118

Query: 119 LRQYNFDNTEGGFYIAPAFMDKLIVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178
           LRQYN DN   GFYIAPAFMDKL+VHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178

Query: 179 FQKMGINPIMMSAGELESGNAGEPAKLIRQR---------------LFINDLDAGAGRMG 223
             KMGINPIMMSAGELESGNAGEPAKLIRQR               LFINDLDAGAGRMG
Sbjct: 179 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 238

Query: 224 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDG 283
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKE+N RVPI+ TGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 298

Query: 284 RMEKFYWAPTREDRIGVCKGIFQTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVR 343
           RMEKFYWAPTREDRIGVCKGIF+TD + +E +VT+VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 344 KWISGVGVDLIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLN 403
           K++  +GV+ IGK+LVNS+EGPPVFEQP+MT EKL+EYGNMLV EQENVKRVQLA+ YL+
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418

Query: 404 EAALGNANDDAIKRGTF 420
           +AALG+AN DAI RGTF
Sbjct: 419 QAALGDANADAIGRGTF 435


>AT2G39730.1 | Symbols: RCA | rubisco activase |
           chr2:16570951-16573345 REVERSE LENGTH=474
          Length = 474

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/437 (75%), Positives = 363/437 (83%), Gaps = 19/437 (4%)

Query: 1   MAASVSTIGTV-KTPLSLNXXXXXXXXXXXXXXXXXLKKVISRLPNT-KVSNGSFKIVAA 58
           MAA+VST+G + + PLSLN                     +SR   + K SNGSFK++A 
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA- 59

Query: 59  EIDESKQTDGDRWRGLAYDISDDQQDITRGKGMVDPLFQAPQNAGTHYAVMSSYEYISTG 118
            + E KQTDGDRWRGLAYD SDDQQDITRGKGMVD +FQAP   GTH+AV+SSYEY+S G
Sbjct: 60  -VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 118

Query: 119 LRQYNFDNTEGGFYIAPAFMDKLIVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178
           LRQYN DN   GFYIAPAFMDKL+VHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178

Query: 179 FQKMGINPIMMSAGELESGNAGEPAKLIRQR---------------LFINDLDAGAGRMG 223
             KMGINPIMMSAGELESGNAGEPAKLIRQR               LFINDLDAGAGRMG
Sbjct: 179 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 238

Query: 224 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDG 283
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKE+N RVPI+ TGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 298

Query: 284 RMEKFYWAPTREDRIGVCKGIFQTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVR 343
           RMEKFYWAPTREDRIGVCKGIF+TD + +E +VT+VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 344 KWISGVGVDLIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLN 403
           K++  +GV+ IGK+LVNS+EGPPVFEQP+MT EKL+EYGNMLV EQENVKRVQLA+ YL+
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418

Query: 404 EAALGNANDDAIKRGTF 420
           +AALG+AN DAI RGTF
Sbjct: 419 QAALGDANADAIGRGTF 435


>AT1G73110.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27494344-27496844
           REVERSE LENGTH=432
          Length = 432

 Score =  311 bits (798), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 155/301 (51%), Positives = 210/301 (69%), Gaps = 22/301 (7%)

Query: 123 NFDNTEGGFYIAPAFMDKLIVHITKNFLTLP-NIKVPLILGIWGGKGQGKSFQCELVFQK 181
           +F++ +G +YIAP+F+DK+ VHI KN+L    NIK+PLILGIWGGKGQGK+FQ EL+F+ 
Sbjct: 128 SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKIPLILGIWGGKGQGKTFQTELIFKT 187

Query: 182 MGINPIMMSAGELESGNAGEPAKLIRQR----------------LFINDLDAGAGRMGGT 225
           MG+ P++MSAGELES  AGEP +LIR R                L IND+DAG GR G  
Sbjct: 188 MGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAGLGRFG-E 246

Query: 226 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNP-RVPIVVTGNDFSTLYAPLIRDGR 284
           TQ TVNNQ+V  TLMN+ADNPT V +   + + D   RVP++VTGNDFSTLYAPLIR+GR
Sbjct: 247 TQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGR 306

Query: 285 MEKFYWAPTREDRIGVCKGIFQTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVRK 344
           MEKFYW PTRED + +   +++ D +S + V++IVD FP Q++DF+GALR+R YD  + K
Sbjct: 307 MEKFYWQPTREDIVNIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILK 366

Query: 345 WISGV-GVDLIGKKLVNSKEGP--PVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKY 401
           W+    G++ +GK L+  K+    P F  P+ T+E LLE G  L+ EQ+ +   +L+ +Y
Sbjct: 367 WVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEY 426

Query: 402 L 402
           +
Sbjct: 427 M 427