Miyakogusa Predicted Gene

Lj2g3v2598840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2598840.1 CUFF.39149.1
         (95 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro...   111   9e-26
AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro...   111   9e-26
AT3G12550.2 | Symbols:  | XH/XS domain-containing protein | chr3...    92   9e-20
AT3G12550.1 | Symbols:  | XH/XS domain-containing protein | chr3...    92   9e-20
AT4G01780.1 | Symbols:  | XH/XS domain-containing protein | chr4...    86   7e-18
AT4G00380.1 | Symbols:  | XH/XS domain-containing protein | chr4...    76   4e-15
AT1G15910.1 | Symbols:  | XH/XS domain-containing protein | chr1...    76   5e-15
AT1G13790.1 | Symbols:  | XH/XS domain-containing protein | chr1...    70   4e-13
AT1G80790.1 | Symbols:  | XH/XS domain-containing protein | chr1...    57   3e-09
AT4G01180.1 | Symbols:  | XH/XS domain-containing protein | chr4...    56   4e-09
AT3G29375.2 | Symbols:  | XH domain-containing protein | chr3:11...    52   9e-08
AT3G29375.1 | Symbols:  | XH domain-containing protein | chr3:11...    52   9e-08
AT5G59390.1 | Symbols:  | XH/XS domain-containing protein | chr5...    50   3e-07

>AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing
           protein | chr3:18031240-18033615 FORWARD LENGTH=647
          Length = 647

 Score =  111 bits (278), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 72/92 (78%), Gaps = 2/92 (2%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           MKHM  DGD+EV+  +D + +DL EKE  L +LD  NQTLI++ER++NDELQEA +EL+ 
Sbjct: 440 MKHMASDGDAEVVKEVDIIFKDLGEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVN 499

Query: 61  VIKEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
           ++KE  T  NIGVKRMGEL T+PFV+AM+ KY
Sbjct: 500 IMKEWNT--NIGVKRMGELVTKPFVDAMQQKY 529


>AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing
           protein | chr3:18031240-18033615 FORWARD LENGTH=647
          Length = 647

 Score =  111 bits (278), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 72/92 (78%), Gaps = 2/92 (2%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           MKHM  DGD+EV+  +D + +DL EKE  L +LD  NQTLI++ER++NDELQEA +EL+ 
Sbjct: 440 MKHMASDGDAEVVKEVDIIFKDLGEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVN 499

Query: 61  VIKEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
           ++KE  T  NIGVKRMGEL T+PFV+AM+ KY
Sbjct: 500 IMKEWNT--NIGVKRMGELVTKPFVDAMQQKY 529


>AT3G12550.2 | Symbols:  | XH/XS domain-containing protein |
           chr3:3978669-3981372 FORWARD LENGTH=638
          Length = 638

 Score = 91.7 bits (226), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 2/92 (2%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           M+ +E D  SE++N ++    DL E E  L  L+  NQ L+++ERKSNDELQEARR LI 
Sbjct: 433 MRLVELDSGSEIVNKVETFLRDLSETEGELAHLNQFNQDLVVQERKSNDELQEARRALIS 492

Query: 61  VIKEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
            ++++    +IGVKRMGELDT+PF++AM++KY
Sbjct: 493 NLRDMGL--HIGVKRMGELDTKPFMKAMRIKY 522


>AT3G12550.1 | Symbols:  | XH/XS domain-containing protein |
           chr3:3978669-3981372 FORWARD LENGTH=638
          Length = 638

 Score = 91.7 bits (226), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 2/92 (2%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           M+ +E D  SE++N ++    DL E E  L  L+  NQ L+++ERKSNDELQEARR LI 
Sbjct: 433 MRLVELDSGSEIVNKVETFLRDLSETEGELAHLNQFNQDLVVQERKSNDELQEARRALIS 492

Query: 61  VIKEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
            ++++    +IGVKRMGELDT+PF++AM++KY
Sbjct: 493 NLRDMGL--HIGVKRMGELDTKPFMKAMRIKY 522


>AT4G01780.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:767310-769246 FORWARD LENGTH=472
          Length = 472

 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 14/94 (14%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           MKHM  DGD++V+  +D + +DL EKE  L +L+  NQTLI++ER++NDELQEAR+EL+ 
Sbjct: 277 MKHMASDGDAQVVKEVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKELVN 336

Query: 61  VIKEIPTRDNIGVKRMGELDTRPFVEAMKMKYNE 94
                          MGEL  +PFV+AM+ KY +
Sbjct: 337 C--------------MGELVRKPFVDAMQQKYCQ 356


>AT4G00380.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:167959-170448 FORWARD LENGTH=635
          Length = 635

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 66/98 (67%), Gaps = 3/98 (3%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           MKH+  D D  V   M  ++++L +K+  L +L+++N  L+ KER+SNDE+Q AR+++I 
Sbjct: 429 MKHLGDDDDEAVQTKMKEMNDELDDKKAELEDLESMNSVLMTKERQSNDEIQAARQKMIA 488

Query: 61  VIKE-IPTRDNIGVKRMGELDTRPFVEAMKMKY--NEA 95
            +   +    +IGVKRMGELD +PF++  K++Y  NEA
Sbjct: 489 GLTGLLGAESDIGVKRMGELDEKPFLDVCKLRYSANEA 526


>AT1G15910.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:5465951-5468723 FORWARD LENGTH=634
          Length = 634

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 3/98 (3%)

Query: 1   MKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIK 60
           MKH+  D D  V   M  ++++L +K+  L  L+++N  L+ KER+SNDE+Q AR++LI 
Sbjct: 428 MKHLGDDDDEAVQKKMKEMNDELDDKKAELEGLESMNSVLMTKERQSNDEIQAARKKLIA 487

Query: 61  VIKE-IPTRDNIGVKRMGELDTRPFVEAMKMKY--NEA 95
            +   +    +IGVKRMGELD +PF++  K++Y  NEA
Sbjct: 488 GLTGLLGAETDIGVKRMGELDEKPFLDVCKLRYSANEA 525


>AT1G13790.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:4727438-4730229 FORWARD LENGTH=736
          Length = 736

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 1   MKHM-EGDG-DSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARREL 58
           M HM EG+G DS++  M++   E+L+EKE      ++L QTL++K   +NDELQ+AR+ L
Sbjct: 527 MGHMQEGEGEDSKIKEMIEKTKEELKEKEEDWEYQESLYQTLVVKHGYTNDELQDARKAL 586

Query: 59  IKVIKEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
           I+ ++E+ TR  IGVKRMG LD  PF +  K KY
Sbjct: 587 IRSMRELTTRAYIGVKRMGALDETPFKKVAKEKY 620


>AT1G80790.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:30360280-30362856 FORWARD LENGTH=634
          Length = 634

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)

Query: 30  LRELDALNQTLIIKERKSNDELQEARRELIKVIKEIPT-RDNIGVKRMGELDTRPFVEAM 88
           L++L+  N  L++KERKSNDE+ EAR+ LI  ++E+ + R+ I VKRMGEL+ +PF+ A 
Sbjct: 456 LQDLEDTNSALMVKERKSNDEIVEARKFLITELRELVSDRNIIRVKRMGELEEKPFMTAC 515

Query: 89  KMK 91
           + +
Sbjct: 516 RQR 518


>AT4G01180.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:501287-503394 REVERSE LENGTH=554
          Length = 554

 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 7/96 (7%)

Query: 1   MKHMEG-DGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELI 59
           MKHM G DGD +++  +     +L  +E +L E      TL  KER +NDE Q+AR+E+I
Sbjct: 336 MKHMVGCDGDKDIVEKIAKTQIELDARETALHEK---MMTLARKERATNDEYQDARKEMI 392

Query: 60  KVIK---EIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
           KV K   E+  ++ I VK MGEL+  PF+ A+  K+
Sbjct: 393 KVWKANEELMKQEKIRVKIMGELNPAPFLPAVMNKH 428


>AT3G29375.2 | Symbols:  | XH domain-containing protein |
           chr3:11280882-11281573 FORWARD LENGTH=176
          Length = 176

 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)

Query: 18  ALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIKVIKEIP-TRDNIGVKRM 76
            + E+L +K+  L + + L   L++KER +NDE+ EA++ LI  ++++   R  I VKRM
Sbjct: 43  VMKEELEDKDSELEQREGLINALLVKERYANDEILEAQKLLISQMRDLTDDRTTIRVKRM 102

Query: 77  GELDTRPFVEAMK 89
           G LD  PFV+A K
Sbjct: 103 GHLDVEPFVKASK 115


>AT3G29375.1 | Symbols:  | XH domain-containing protein |
           chr3:11280151-11281829 FORWARD LENGTH=355
          Length = 355

 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)

Query: 18  ALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIKVIKEIP-TRDNIGVKRM 76
            + E+L +K+  L + + L   L++KER +NDE+ EA++ LI  ++++   R  I VKRM
Sbjct: 166 VMKEELEDKDSELEQREGLINALLVKERYANDEILEAQKLLISQMRDLTDDRTTIRVKRM 225

Query: 77  GELDTRPFVEAMK 89
           G LD  PFV+A K
Sbjct: 226 GHLDVEPFVKASK 238


>AT5G59390.1 | Symbols:  | XH/XS domain-containing protein |
           chr5:23954934-23957151 FORWARD LENGTH=561
          Length = 561

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 7/96 (7%)

Query: 1   MKHMEG-DGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELI 59
           MKHM G DGD +++  +      L  +E +L E      TL  KER +NDE Q+  +E+I
Sbjct: 346 MKHMVGSDGDKDIVEKIAKTQIQLDAQETALHEK---MMTLARKERATNDEYQDVLKEMI 402

Query: 60  KVI---KEIPTRDNIGVKRMGELDTRPFVEAMKMKY 92
           +V    +E+  ++ I VKRMG+L+  PF+ A+  K+
Sbjct: 403 QVWNANEELMKQEKIRVKRMGQLNPAPFLPAVMKKH 438