Miyakogusa Predicted Gene
- Lj2g3v2587680.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2587680.2 tr|G7KBR5|G7KBR5_MEDTR AP-3 complex subunit
beta-2 OS=Medicago truncatula GN=MTR_5g079920 PE=4
SV=1,84.4,0,ADAPTER-RELATED PROTEIN COMPLEX 3, BETA SUBUNIT,AP-3
complex subunit beta; ADAPTER-RELATED PROTEIN C,CUFF.39140.2
(1128 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G55480.2 | Symbols: PAT2 | protein affected trafficking... 1271 0.0
AT3G55480.1 | Symbols: PAT2 | protein affected trafficking... 1061 0.0
AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920608-... 112 1e-24
AT4G11380.1 | Symbols: | Adaptin family protein | chr4:6920608-... 112 1e-24
AT4G23460.1 | Symbols: | Adaptin family protein | chr4:12243899... 112 2e-24
AT5G11490.2 | Symbols: | adaptin family protein | chr5:3671964-... 69 2e-11
AT5G11490.1 | Symbols: | adaptin family protein | chr5:3671964-... 69 2e-11
>AT3G55480.2 | Symbols: PAT2 | protein affected trafficking 2 |
chr3:20566372-20571171 REVERSE LENGTH=1115
Length = 1115
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1131 (57%), Positives = 807/1131 (71%), Gaps = 29/1131 (2%)
Query: 1 MFHQFGATAESLSKASTAVFRIGTDAHLYDDPEDVNIAPLLDSKFDSDKCEALKRLLALI 60
MF++FG+T+E+LSKAS + RIGTDAHLYDDPEDVNIAPLLDSKF+S+KCEALKRLLALI
Sbjct: 1 MFNKFGSTSETLSKASAGLLRIGTDAHLYDDPEDVNIAPLLDSKFESEKCEALKRLLALI 60
Query: 61 AQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXXHYAEKRPNEALLSINYFQKDLGDTNPL 120
AQGFDVSNFFPQVVKNVASQS E YAEKRPNEALLSINYFQKDLGD NPL
Sbjct: 61 AQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPL 120
Query: 121 VRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCAANALPKLHDLRMEEHASAIE 180
VRAWALR MAGIRLH IAPL L AV KCARDP+VYVR+CAANALPKLHDLR+EEHASAIE
Sbjct: 121 VRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLEEHASAIE 180
Query: 181 EIVGLLLNDHSPGVVGAAASAFNSVCPNNFLLIGRNYRRLCEILPDVEEWGQIMLIGILL 240
E+VG+LLNDHSPGVVGAAA+AF S+CPNNF LIG+NY++LC+ILPDVEEWGQI+LIG LL
Sbjct: 181 ELVGILLNDHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLL 240
Query: 241 RFVIARHGLVKESIMFSLYNKDGDTLEEDES---QVSLREDDGYASEQSVSEFANMIFQC 297
R+V+ARHGLV+ES+M S++ + + E + ++L ++DG S+ +++ +C
Sbjct: 241 RYVVARHGLVRESLMLSIHGTNSNGFCEKDGLGRDLTLDKEDGGKSDSFDVNLVSLVSKC 300
Query: 298 YIEGPDEYLSRSSSTSRVAPKLDVSQYTSCS-DEVVKILLQCTSPLFWSNNSAVVLSAAG 356
YI+GPDEYLSRSS T V+ D + TS + +E VKILLQCTSPL WSNNSAVVL+AAG
Sbjct: 301 YIQGPDEYLSRSSCTDTVSSAFDTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAG 360
Query: 357 VHWIMASKENVKRIVKPLLFVQRSSYASRYVVLCNIQVFAKAMPSLFAPHYQDFFICSSD 416
V WIMA E+VK+IVKPLLF+ RSS AS+YVVLCNI VFAKA+PSLFAPH+++FFICSSD
Sbjct: 361 VQWIMAPLEDVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSD 420
Query: 417 SYQIKALKLEILSSIATDSSVPLILKEFQDYIRDPDRRFAADTIAAIGLCAQRLSKMATT 476
+YQ+KA KLE+LS IAT SS+ IL+EF+DYI+DPDRRFAADT+AAIGLCA+RL + TT
Sbjct: 421 AYQVKAYKLEMLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTT 480
Query: 477 CLDGLLTLIRQDFLCGEIRSLDGEEGVLXXXXXXXXXXXKLEPPSYEKVIIQLVRSLDTI 536
CLDGLL L+RQ+ G+ S DGE GVL + +P +EKV+IQL RSLD+I
Sbjct: 481 CLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDSI 540
Query: 537 KVPAGRAMIIWMLGEYCSLGEIIPRMLSTVLKYLAWCFASEALETKLQILNTTAKVLLYI 596
KV A RA IIWM+G YCSLG IIPRML+T+ KYLAW F SEA ETKLQILNT AKVL+
Sbjct: 541 KVAAARATIIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSEASETKLQILNTIAKVLISA 600
Query: 597 KGEDSWTLRKIWSYVIELAECDQNYDIRDRSRVLKKLFSSSLEFQNAEENSKSQKRDQSC 656
+ D L++I YV EL E D +YDIRDR+R LKKL S L E+S + + + +
Sbjct: 601 EAGDFHMLKRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCKLASHEPAEDSVASQENIAA 660
Query: 657 VLSECIFGGQTKSVTVPSEPINY--RFYLPGSLSQLVFHAAPGYEPLPKPCSLPYIDLDQ 714
+ E +FG + KSV+ PI RFYLPGSLSQ+V HAAPGYEPLPKPCS Y + DQ
Sbjct: 661 HVVEHVFGRKLKSVS----PITLHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVYEEQDQ 716
Query: 715 YD--GAAXXXXXXXXXXXXXXXXXXXNAXXXXXXXXXXXXXXXXXXXXTMPGNGGNNNAD 772
N N N+ A
Sbjct: 717 LSDLDKQREAAADLDGSEESSETGDENGSSDYDSESSNGSDFSSEGDERTVSNDANDPAA 776
Query: 773 LLIQISDPGNVLENQNGGAHSGTSGLRDLMSTKSLESWLDEAPGSSKSREVEHSRVQRSS 832
LIQIS+ S ++ +L S ++L+ WLD+ P +S + Q S
Sbjct: 777 PLIQISET------------SVSADQEELRSRRALDLWLDDQPSTSNQTPSALNSNQSSY 824
Query: 833 ARITISNIGSRVKPKCYILLDPANGNGLKVNYSFLSETPSISSHLVCLELLFENCSLEPM 892
A+I+I ++GSRVKPK Y L+DP NG+GLKV+Y+FLSE ++S VC+E+LFEN S EP+
Sbjct: 825 AKISIGDVGSRVKPKSYSLVDPGNGSGLKVDYAFLSEVSNVSPLHVCVEVLFENSSAEPI 884
Query: 893 LDIVLIDEXXXXXXXXXXXXXPATENTLKFNIDKPAVVSMEDILSLEPGQIAKRTLLARF 952
L++ L DE N NI P ++ ME+I LEP Q KR + RF
Sbjct: 885 LEVNLEDEESMKVADSSEQTLVGKANASYNNI--PTLIPMEEISCLEPHQSTKRLIQVRF 942
Query: 953 HHHLLPLKLSLFCNDNRFPVKLRPDIGYFVKPLPISNEAFRDKESRLPGMFEYVRSCTFT 1012
HHHLLP++L+L N+ + PVKLRPD+GY VKP +S E F ESRLPGMFEY R CTF
Sbjct: 943 HHHLLPMRLTLHYNEKKVPVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFD 1002
Query: 1013 DHILELNKDNNSLTEDKFLVICETLAIKMLSNANLSIVSVDMPVASNLDDASGLCLRFCS 1072
DH+ + +N +DKFL ICE++ +K+LSN+NL +VSVD+PVA++L+DA+GL LRF S
Sbjct: 1003 DHVKDSRTENG---KDKFLSICESITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRFSS 1059
Query: 1073 EILSNSMPCLITVTVEGKCSDPLTASVKVNCEDTVFGLNFLNRVVNFLVEP 1123
+ILS+ +P LIT+TVEGKC++ L +VK+NCE+TVFGLN LNR+ NF+VEP
Sbjct: 1060 KILSSEIPLLITITVEGKCTEVLNLTVKINCEETVFGLNLLNRIANFMVEP 1110
>AT3G55480.1 | Symbols: PAT2 | protein affected trafficking 2 |
chr3:20566372-20570629 REVERSE LENGTH=987
Length = 987
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1003 (54%), Positives = 696/1003 (69%), Gaps = 29/1003 (2%)
Query: 129 MAGIRLHAIAPLVLVAVGKCARDPSVYVRKCAANALPKLHDLRMEEHASAIEEIVGLLLN 188
MAGIRLH IAPL L AV KCARDP+VYVR+CAANALPKLHDLR+EEHASAIEE+VG+LLN
Sbjct: 1 MAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLEEHASAIEELVGILLN 60
Query: 189 DHSPGVVGAAASAFNSVCPNNFLLIGRNYRRLCEILPDVEEWGQIMLIGILLRFVIARHG 248
DHSPGVVGAAA+AF S+CPNNF LIG+NY++LC+ILPDVEEWGQI+LIG LLR+V+ARHG
Sbjct: 61 DHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLLRYVVARHG 120
Query: 249 LVKESIMFSLYNKDGDTLEEDES---QVSLREDDGYASEQSVSEFANMIFQCYIEGPDEY 305
LV+ES+M S++ + + E + ++L ++DG S+ +++ +CYI+GPDEY
Sbjct: 121 LVRESLMLSIHGTNSNGFCEKDGLGRDLTLDKEDGGKSDSFDVNLVSLVSKCYIQGPDEY 180
Query: 306 LSRSSSTSRVAPKLDVSQYTSCS-DEVVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASK 364
LSRSS T V+ D + TS + +E VKILLQCTSPL WSNNSAVVL+AAGV WIMA
Sbjct: 181 LSRSSCTDTVSSAFDTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAGVQWIMAPL 240
Query: 365 ENVKRIVKPLLFVQRSSYASRYVVLCNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALK 424
E+VK+IVKPLLF+ RSS AS+YVVLCNI VFAKA+PSLFAPH+++FFICSSD+YQ+KA K
Sbjct: 241 EDVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYK 300
Query: 425 LEILSSIATDSSVPLILKEFQDYIRDPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTL 484
LE+LS IAT SS+ IL+EF+DYI+DPDRRFAADT+AAIGLCA+RL + TTCLDGLL L
Sbjct: 301 LEMLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLAL 360
Query: 485 IRQDFLCGEIRSLDGEEGVLXXXXXXXXXXXKLEPPSYEKVIIQLVRSLDTIKVPAGRAM 544
+RQ+ G+ S DGE GVL + +P +EKV+IQL RSLD+IKV A RA
Sbjct: 361 VRQESFAGDFESADGEAGVLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARAT 420
Query: 545 IIWMLGEYCSLGEIIPRMLSTVLKYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTL 604
IIWM+G YCSLG IIPRML+T+ KYLAW F SEA ETKLQILNT AKVL+ + D L
Sbjct: 421 IIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSEASETKLQILNTIAKVLISAEAGDFHML 480
Query: 605 RKIWSYVIELAECDQNYDIRDRSRVLKKLFSSSLEFQNAEENSKSQKRDQSCVLSECIFG 664
++I YV EL E D +YDIRDR+R LKKL S L E+S + + + + + E +FG
Sbjct: 481 KRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCKLASHEPAEDSVASQENIAAHVVEHVFG 540
Query: 665 GQTKSVTVPSEPINY--RFYLPGSLSQLVFHAAPGYEPLPKPCSLPYIDLDQYD--GAAX 720
+ KSV+ PI RFYLPGSLSQ+V HAAPGYEPLPKPCS Y + DQ
Sbjct: 541 RKLKSVS----PITLHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVYEEQDQLSDLDKQR 596
Query: 721 XXXXXXXXXXXXXXXXXXNAXXXXXXXXXXXXXXXXXXXXTMPGNGGNNNADLLIQISDP 780
N N N+ A LIQIS+
Sbjct: 597 EAAADLDGSEESSETGDENGSSDYDSESSNGSDFSSEGDERTVSNDANDPAAPLIQISET 656
Query: 781 GNVLENQNGGAHSGTSGLRDLMSTKSLESWLDEAPGSSKSREVEHSRVQRSSARITISNI 840
S ++ +L S ++L+ WLD+ P +S + Q S A+I+I ++
Sbjct: 657 ------------SVSADQEELRSRRALDLWLDDQPSTSNQTPSALNSNQSSYAKISIGDV 704
Query: 841 GSRVKPKCYILLDPANGNGLKVNYSFLSETPSISSHLVCLELLFENCSLEPMLDIVLIDE 900
GSRVKPK Y L+DP NG+GLKV+Y+FLSE ++S VC+E+LFEN S EP+L++ L DE
Sbjct: 705 GSRVKPKSYSLVDPGNGSGLKVDYAFLSEVSNVSPLHVCVEVLFENSSAEPILEVNLEDE 764
Query: 901 XXXXXXXXXXXXXPATENTLKFNIDKPAVVSMEDILSLEPGQIAKRTLLARFHHHLLPLK 960
N NI P ++ ME+I LEP Q KR + RFHHHLLP++
Sbjct: 765 ESMKVADSSEQTLVGKANASYNNI--PTLIPMEEISCLEPHQSTKRLIQVRFHHHLLPMR 822
Query: 961 LSLFCNDNRFPVKLRPDIGYFVKPLPISNEAFRDKESRLPGMFEYVRSCTFTDHILELNK 1020
L+L N+ + PVKLRPD+GY VKP +S E F ESRLPGMFEY R CTF DH+ +
Sbjct: 823 LTLHYNEKKVPVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFDDHVKDSRT 882
Query: 1021 DNNSLTEDKFLVICETLAIKMLSNANLSIVSVDMPVASNLDDASGLCLRFCSEILSNSMP 1080
+N +DKFL ICE++ +K+LSN+NL +VSVD+PVA++L+DA+GL LRF S+ILS+ +P
Sbjct: 883 ENG---KDKFLSICESITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRFSSKILSSEIP 939
Query: 1081 CLITVTVEGKCSDPLTASVKVNCEDTVFGLNFLNRVVNFLVEP 1123
LIT+TVEGKC++ L +VK+NCE+TVFGLN LNR+ NF+VEP
Sbjct: 940 LLITITVEGKCTEVLNLTVKINCEETVFGLNLLNRIANFMVEP 982
>AT4G11380.2 | Symbols: | Adaptin family protein |
chr4:6920608-6925444 FORWARD LENGTH=916
Length = 916
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 31/330 (9%)
Query: 321 VSQYTSCSDEVVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASKENV----------KRI 370
+S+Y + + +++ +P N AVVLSA V I+ E + K++
Sbjct: 249 LSKYKAADPREAENIVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVIRNLCKKM 306
Query: 371 VKPLLFVQRSSYASRYVVLCNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALKLEILSS 430
PL+ + + +YV L NI + + P++ A + FF +D +K KLEI+
Sbjct: 307 APPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIK 366
Query: 431 IATDSSVPLILKEFQDYIRDPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTLIRQDFL 490
+A+D ++ +L EF++Y + D F + AIG CA +L + A C+ LL LI+
Sbjct: 367 LASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV- 425
Query: 491 CGEIRSLDGEEGVLXXXXXXXXXXXKLEPPSYEKVIIQLVRSLDTIKVPAGRAMIIWMLG 550
V+ + P +YE +I L SLDT+ P +A +IW++G
Sbjct: 426 ----------NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 475
Query: 551 EYCSLGEIIPRMLSTVLKYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTLRKIWSY 610
EY + +L + L+ F E + +LQ+L T K+ L E + ++
Sbjct: 476 EYAERIDNADELLESFLEN----FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV--- 528
Query: 611 VIELAECD-QNYDIRDRSRVLKKLFSSSLE 639
V+ A + N D+RDR+ + +L S+ E
Sbjct: 529 VLNNATVETDNPDLRDRAYIYWRLLSTDPE 558
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 34 DVNIAPLLDSKFDSDKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXX 93
D +I L+ + D K +A+K+++A + G DVS+ F VV + +++LE
Sbjct: 40 DWDIVTLVKLRLDKRK-DAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLI 98
Query: 94 HYAEKRPNEALLSINYFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPS 153
+YA+ +P+ A+L++N F KD D NPL+RA A+R M IR+ I + + KC +D
Sbjct: 99 NYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDD 158
Query: 154 VYVRKCAANALPKLHDLRME-EHASAIEEIVGLLLNDHSPGVVGAAASAFNSVCPNN--- 209
YVRK AA + KL D+ E E + L++D++P VV A +A + N+
Sbjct: 159 PYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEIQENSSSP 218
Query: 210 -FLLIGRNYRRLCEILPDVEEWGQIMLIGILLRFVIA 245
F + +L L + EWGQ+ ++ L ++ A
Sbjct: 219 IFEINSTTLTKLLTALNECTEWGQVFILDALSKYKAA 255
>AT4G11380.1 | Symbols: | Adaptin family protein |
chr4:6920608-6925444 FORWARD LENGTH=894
Length = 894
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 31/330 (9%)
Query: 321 VSQYTSCSDEVVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASKENV----------KRI 370
+S+Y + + +++ +P N AVVLSA V I+ E + K++
Sbjct: 227 LSKYKAADPREAENIVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVIRNLCKKM 284
Query: 371 VKPLLFVQRSSYASRYVVLCNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALKLEILSS 430
PL+ + + +YV L NI + + P++ A + FF +D +K KLEI+
Sbjct: 285 APPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIK 344
Query: 431 IATDSSVPLILKEFQDYIRDPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTLIRQDFL 490
+A+D ++ +L EF++Y + D F + AIG CA +L + A C+ LL LI+
Sbjct: 345 LASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV- 403
Query: 491 CGEIRSLDGEEGVLXXXXXXXXXXXKLEPPSYEKVIIQLVRSLDTIKVPAGRAMIIWMLG 550
V+ + P +YE +I L SLDT+ P +A +IW++G
Sbjct: 404 ----------NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 453
Query: 551 EYCSLGEIIPRMLSTVLKYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTLRKIWSY 610
EY + +L + L+ F E + +LQ+L T K+ L E + ++
Sbjct: 454 EYAERIDNADELLESFLEN----FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV--- 506
Query: 611 VIELAECD-QNYDIRDRSRVLKKLFSSSLE 639
V+ A + N D+RDR+ + +L S+ E
Sbjct: 507 VLNNATVETDNPDLRDRAYIYWRLLSTDPE 536
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 7/211 (3%)
Query: 41 LDSKFDSDKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXXHYAEKRP 100
L+S++ + +A+K+++A + G DVS+ F VV + +++LE +YA+ +P
Sbjct: 24 LNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQP 83
Query: 101 NEALLSINYFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCA 160
+ A+L++N F KD D NPL+RA A+R M IR+ I + + KC +D YVRK A
Sbjct: 84 DLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTA 143
Query: 161 ANALPKLHDLRME--EHASAIEEIVGLLLNDHSPGVVGAAASAFNSVCPNN----FLLIG 214
A + KL D+ E E +E + L++D++P VV A +A + N+ F +
Sbjct: 144 AICVAKLFDINAELVEDRGFLEALKD-LISDNNPMVVANAVAALAEIQENSSSPIFEINS 202
Query: 215 RNYRRLCEILPDVEEWGQIMLIGILLRFVIA 245
+L L + EWGQ+ ++ L ++ A
Sbjct: 203 TTLTKLLTALNECTEWGQVFILDALSKYKAA 233
>AT4G23460.1 | Symbols: | Adaptin family protein |
chr4:12243899-12248898 REVERSE LENGTH=893
Length = 893
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 31/330 (9%)
Query: 321 VSQYTSCSDEVVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASKENV----------KRI 370
+S+Y + + +++ +P N AVVLSA V I+ E + K++
Sbjct: 227 LSRYKASDPREAENIVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVIRNLCKKM 284
Query: 371 VKPLLFVQRSSYASRYVVLCNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALKLEILSS 430
PL+ + + +YV L NI + + P++ A + FF +D +K KLEI+
Sbjct: 285 APPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIK 344
Query: 431 IATDSSVPLILKEFQDYIRDPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTLIRQDFL 490
+A+D ++ +L EF++Y + D F + AIG CA +L + A C+ LL LI+
Sbjct: 345 LASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV- 403
Query: 491 CGEIRSLDGEEGVLXXXXXXXXXXXKLEPPSYEKVIIQLVRSLDTIKVPAGRAMIIWMLG 550
V+ + P +YE +I L SLDT+ P +A +IW++G
Sbjct: 404 ----------NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 453
Query: 551 EYCSLGEIIPRMLSTVLKYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTLRKIWSY 610
EY + +L + L+ F E + +LQ+L T K+ L E + ++
Sbjct: 454 EYAERIDNADELLESFLEN----FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV--- 506
Query: 611 VIELAECD-QNYDIRDRSRVLKKLFSSSLE 639
V+ A + N D+RDR+ + +L S+ E
Sbjct: 507 VLNNATVETDNPDLRDRAYIYWRLLSTDPE 536
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 41 LDSKFDSDKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXXHYAEKRP 100
L+S++ + +A+K+++A + G DVS+ F VV + +++LE +YA+ +P
Sbjct: 24 LNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQP 83
Query: 101 NEALLSINYFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCA 160
+ A+L++N F KD D NPL+RA A+R M IR+ I + + KC +D YVRK A
Sbjct: 84 DLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTA 143
Query: 161 ANALPKLHDLRME--EHASAIEEIVGLLLNDHSPGVVGAAASAFNSVCPNN----FLLIG 214
A + KL D+ E E +E + L++D++P VV A +A + N+ F +
Sbjct: 144 AICVAKLFDINAELVEDRGFLEALKD-LISDNNPMVVANAVAALAEIQENSTSPIFEINS 202
Query: 215 RNYRRLCEILPDVEEWGQIMLIGILLRF 242
+L L + EWGQ+ ++ L R+
Sbjct: 203 TILTKLLTALNECTEWGQVFILDALSRY 230
>AT5G11490.2 | Symbols: | adaptin family protein |
chr5:3671964-3676263 FORWARD LENGTH=850
Length = 850
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 46 DSDKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXXHYAEKRPNEALL 105
D K + K++++ + G DVS+ F ++V A+ + +YA+ P+ +LL
Sbjct: 41 DDSKRDLYKKVISYMTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLL 100
Query: 106 SINYFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCAANALP 165
+IN+ Q+D D +P++R ALR++ +R+ + ++ +G +D + YVR A +
Sbjct: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVL 160
Query: 166 KLHDLRMEE--HASAIEEIVGLLLNDHSPGVVGAAASAFNSV-----------CPNNFLL 212
KL+ + A + L+L+D VV SA + C L
Sbjct: 161 KLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESL 220
Query: 213 IGRN--YRRLCEILPDVEEWGQIMLIGILLRFV 243
+ + Y L I + EW Q +++ + +++V
Sbjct: 221 LSKPVIYYFLNRI-KEFNEWAQCLILELAVKYV 252
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 128/308 (41%), Gaps = 44/308 (14%)
Query: 331 VVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASKENVKRIVKPLL-FVQRSSYASRYVVL 389
VK+ LQ T LS VH ++ +RI PLL V S Y +L
Sbjct: 281 TVKVFLQLT------------LSMTDVH-----QQVYERIKSPLLTLVSSGSPEQSYAIL 323
Query: 390 CNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALKLEILSSIATDSSVPLILKEFQDYIR 449
++ + P +FA Y+ F+ ++ +K LKLE+L+++A +S+ I+ E +Y
Sbjct: 324 SHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAA 383
Query: 450 DPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTLIRQDFLCGEIRSLDGEEGVLXXXXX 509
+ D A ++I A+G A + + +D LL FL E + E VL
Sbjct: 384 NVDIAIARESIRAVGKIALQQYDV-NAIVDRLL-----QFLEMEKDYVTAETLVLVKDLL 437
Query: 510 XXXXXXKLEPPSYEKVIIQLVRSLDT--IKVPAGRAMIIWMLGEYCSLGEIIPRMLSTVL 567
P + I +V + + I+ P +A +IWMLGEY P +L ++
Sbjct: 438 RKY-------PQWSHDCISVVGGISSKNIQEPKAKAALIWMLGEYAQDMSDAPYVLENLI 490
Query: 568 KYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTLRKIWSYVIELAECDQNYDIRDRS 627
+ W A E +L +L K E +K + D + D+ DR+
Sbjct: 491 E--NWEEEHSA-EVRLHLLTAAMKCFFKRAPE----TQKALGTALAAGIADFHQDVHDRA 543
Query: 628 ----RVLK 631
RVL+
Sbjct: 544 LFYYRVLQ 551
>AT5G11490.1 | Symbols: | adaptin family protein |
chr5:3671964-3676144 FORWARD LENGTH=841
Length = 841
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 46 DSDKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEXXXXXXXXXXHYAEKRPNEALL 105
D K + K++++ + G DVS+ F ++V A+ + +YA+ P+ +LL
Sbjct: 41 DDSKRDLYKKVISYMTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLL 100
Query: 106 SINYFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCAANALP 165
+IN+ Q+D D +P++R ALR++ +R+ + ++ +G +D + YVR A +
Sbjct: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVL 160
Query: 166 KLHDLRMEE--HASAIEEIVGLLLNDHSPGVVGAAASAFNSV-----------CPNNFLL 212
KL+ + A + L+L+D VV SA + C L
Sbjct: 161 KLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESL 220
Query: 213 IGRN--YRRLCEILPDVEEWGQIMLIGILLRFV 243
+ + Y L I + EW Q +++ + +++V
Sbjct: 221 LSKPVIYYFLNRI-KEFNEWAQCLILELAVKYV 252
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 128/308 (41%), Gaps = 44/308 (14%)
Query: 331 VVKILLQCTSPLFWSNNSAVVLSAAGVHWIMASKENVKRIVKPLL-FVQRSSYASRYVVL 389
VK+ LQ T LS VH ++ +RI PLL V S Y +L
Sbjct: 281 TVKVFLQLT------------LSMTDVH-----QQVYERIKSPLLTLVSSGSPEQSYAIL 323
Query: 390 CNIQVFAKAMPSLFAPHYQDFFICSSDSYQIKALKLEILSSIATDSSVPLILKEFQDYIR 449
++ + P +FA Y+ F+ ++ +K LKLE+L+++A +S+ I+ E +Y
Sbjct: 324 SHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAA 383
Query: 450 DPDRRFAADTIAAIGLCAQRLSKMATTCLDGLLTLIRQDFLCGEIRSLDGEEGVLXXXXX 509
+ D A ++I A+G A + + +D LL FL E + E VL
Sbjct: 384 NVDIAIARESIRAVGKIALQQYDV-NAIVDRLL-----QFLEMEKDYVTAETLVLVKDLL 437
Query: 510 XXXXXXKLEPPSYEKVIIQLVRSLDT--IKVPAGRAMIIWMLGEYCSLGEIIPRMLSTVL 567
P + I +V + + I+ P +A +IWMLGEY P +L ++
Sbjct: 438 RKY-------PQWSHDCISVVGGISSKNIQEPKAKAALIWMLGEYAQDMSDAPYVLENLI 490
Query: 568 KYLAWCFASEALETKLQILNTTAKVLLYIKGEDSWTLRKIWSYVIELAECDQNYDIRDRS 627
+ W A E +L +L K E +K + D + D+ DR+
Sbjct: 491 E--NWEEEHSA-EVRLHLLTAAMKCFFKRAPE----TQKALGTALAAGIADFHQDVHDRA 543
Query: 628 ----RVLK 631
RVL+
Sbjct: 544 LFYYRVLQ 551