Miyakogusa Predicted Gene
- Lj2g3v2574450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2574450.1 tr|D7M7R3|D7M7R3_ARALL Histone H3 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_489722 PE=3 SV=1,90.3,0,Histone
H3,Histone H3; HISTONE H3,Histone H3; HISTONE_H3_2,Histone H3;
HISTONEH3,Histone H3; Histone,CUFF.39116.1
(134 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G40030.2 | Symbols: | Histone superfamily protein | chr4:185... 246 3e-66
AT5G10980.1 | Symbols: | Histone superfamily protein | chr5:347... 246 3e-66
AT4G40030.3 | Symbols: | Histone superfamily protein | chr4:185... 246 3e-66
AT4G40040.2 | Symbols: | Histone superfamily protein | chr4:185... 246 3e-66
AT4G40040.1 | Symbols: | Histone superfamily protein | chr4:185... 246 3e-66
AT4G40030.1 | Symbols: | Histone superfamily protein | chr4:185... 246 3e-66
AT1G75600.1 | Symbols: | Histone superfamily protein | chr1:283... 244 1e-65
AT1G13370.1 | Symbols: | Histone superfamily protein | chr1:458... 243 3e-65
AT5G65360.1 | Symbols: | Histone superfamily protein | chr5:261... 238 1e-63
AT5G10400.1 | Symbols: | Histone superfamily protein | chr5:327... 238 1e-63
AT5G10390.1 | Symbols: | Histone superfamily protein | chr5:326... 238 1e-63
AT3G27360.1 | Symbols: | Histone superfamily protein | chr3:101... 238 1e-63
AT1G09200.1 | Symbols: | Histone superfamily protein | chr1:297... 238 1e-63
AT5G65350.1 | Symbols: HTR11 | histone 3 11 | chr5:26119406-2611... 228 7e-61
AT1G19890.1 | Symbols: ATMGH3, MGH3 | male-gamete-specific histo... 226 4e-60
AT5G12910.1 | Symbols: | Histone superfamily protein | chr5:407... 186 4e-48
AT1G01370.2 | Symbols: HTR12, CENH3 | Histone superfamily protei... 112 9e-26
AT1G01370.1 | Symbols: HTR12, CENH3 | Histone superfamily protei... 112 9e-26
>AT4G40030.2 | Symbols: | Histone superfamily protein |
chr4:18555840-18556827 REVERSE LENGTH=164
Length = 164
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 29 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 89 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 149 MPKDIQLARRIRGE 162
>AT5G10980.1 | Symbols: | Histone superfamily protein |
chr5:3472591-3473349 REVERSE LENGTH=136
Length = 136
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT4G40030.3 | Symbols: | Histone superfamily protein |
chr4:18555840-18556417 REVERSE LENGTH=136
Length = 136
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT4G40040.2 | Symbols: | Histone superfamily protein |
chr4:18557539-18558236 REVERSE LENGTH=136
Length = 136
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT4G40040.1 | Symbols: | Histone superfamily protein |
chr4:18557539-18558236 REVERSE LENGTH=136
Length = 136
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT4G40030.1 | Symbols: | Histone superfamily protein |
chr4:18555840-18556417 REVERSE LENGTH=136
Length = 136
Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT1G75600.1 | Symbols: | Histone superfamily protein |
chr1:28390753-28391461 FORWARD LENGTH=136
Length = 136
Score = 244 bits (623), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/134 (88%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKSHGGKAPR +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQD+KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KD+QLARR+R +
Sbjct: 121 MPKDVQLARRIRGE 134
>AT1G13370.1 | Symbols: | Histone superfamily protein |
chr1:4587926-4588522 REVERSE LENGTH=136
Length = 136
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/134 (88%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQ+ARKSHGGKAP K +A AARKS PTTGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LL RK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KD+QLARR+RA+
Sbjct: 121 MPKDVQLARRIRAE 134
>AT5G65360.1 | Symbols: | Histone superfamily protein |
chr5:26120099-26120509 REVERSE LENGTH=136
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT5G10400.1 | Symbols: | Histone superfamily protein |
chr5:3270478-3270888 REVERSE LENGTH=136
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT5G10390.1 | Symbols: | Histone superfamily protein |
chr5:3269065-3269475 REVERSE LENGTH=136
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT3G27360.1 | Symbols: | Histone superfamily protein |
chr3:10129459-10129869 REVERSE LENGTH=136
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT1G09200.1 | Symbols: | Histone superfamily protein |
chr1:2971722-2972132 REVERSE LENGTH=136
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>AT5G65350.1 | Symbols: HTR11 | histone 3 11 |
chr5:26119406-26119825 REVERSE LENGTH=139
Length = 139
Score = 228 bits (582), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 122/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTAR S GGKAPRK +A AAR+S P TGGVKKPHR+RPGTVALR+IRKYQK+TE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
+LIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M K+IQLARR+R +
Sbjct: 121 MPKEIQLARRIRGE 134
>AT1G19890.1 | Symbols: ATMGH3, MGH3 | male-gamete-specific histone
H3 | chr1:6905034-6905792 FORWARD LENGTH=137
Length = 137
Score = 226 bits (575), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/135 (83%), Positives = 123/135 (91%), Gaps = 1/135 (0%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSV-PTTGGVKKPHRYRPGTVALREIRKYQKTT 59
MARTKQTARKS GGK PRK++A AARK+ P GGVK+ HR+RPGTVALREIRKYQK+T
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 60 ELLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRIT 119
+LLIRK PFQRLVREIAQDFK DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+T
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 120
Query: 120 IMSKDIQLARRLRAD 134
IMSKDIQLARR+R +
Sbjct: 121 IMSKDIQLARRIRGE 135
>AT5G12910.1 | Symbols: | Histone superfamily protein |
chr5:4077162-4077557 FORWARD LENGTH=131
Length = 131
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 109/134 (81%), Gaps = 5/134 (3%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MAR+ QTARK+ GGKAP A R +T +KKP+RY+PGTVALREIRKYQKTT+
Sbjct: 1 MARSNQTARKATGGKAPH-----FAMRVWQHSTPPLKKPYRYKPGTVALREIRKYQKTTD 55
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
L+IRK PFQRLV+EIAQ K DLRFQ+ AV ALQEAAEA++VG+FEDTNLCA+HAKR TI
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTI 115
Query: 121 MSKDIQLARRLRAD 134
M KDIQLA+RLR D
Sbjct: 116 MPKDIQLAKRLRGD 129
>AT1G01370.2 | Symbols: HTR12, CENH3 | Histone superfamily protein |
chr1:143773-145400 FORWARD LENGTH=178
Length = 178
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 26 ARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFKTDL-- 83
+R+++P G KK +RYRPGTVAL+EIR +QK T LLI F R VR I
Sbjct: 65 SRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQIN 123
Query: 84 RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLARRL 131
R+ + A++ALQEAAE YLVGLF D+ LCAIHA+R+T+M KD +LARRL
Sbjct: 124 RWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRL 171
>AT1G01370.1 | Symbols: HTR12, CENH3 | Histone superfamily protein |
chr1:143773-145400 FORWARD LENGTH=178
Length = 178
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 26 ARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFKTDL-- 83
+R+++P G KK +RYRPGTVAL+EIR +QK T LLI F R VR I
Sbjct: 65 SRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQIN 123
Query: 84 RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLARRL 131
R+ + A++ALQEAAE YLVGLF D+ LCAIHA+R+T+M KD +LARRL
Sbjct: 124 RWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRL 171