Miyakogusa Predicted Gene

Lj2g3v2574440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2574440.1 Non Chatacterized Hit- tr|I1JHY7|I1JHY7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.08,0,AAR2,A1
cistron-splicing factor, AAR2; SUBFAMILY NOT NAMED,NULL; A1 CISTRON
SPLICING FACTOR AAR2-REL,CUFF.39117.1
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G66510.2 | Symbols:  | AAR2 protein family | chr1:24812881-24...   530   e-151
AT1G66510.1 | Symbols:  | AAR2 protein family | chr1:24812881-24...   530   e-151
AT1G66510.3 | Symbols:  | AAR2 protein family | chr1:24813322-24...   454   e-128

>AT1G66510.2 | Symbols:  | AAR2 protein family |
           chr1:24812881-24815804 FORWARD LENGTH=399
          Length = 399

 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/393 (65%), Positives = 311/393 (79%), Gaps = 5/393 (1%)

Query: 1   MDSSTALELVKHGVSLLFLDVPQYTLIAIDTQMFSVGPAFKGIKMIPPGTHFVYYSSSTR 60
           MDS  ALELVKHG +LLFLDVPQYTL+ IDTQ+F+VGPAFKGIKMIPPG HFV+YSSSTR
Sbjct: 1   MDSEKALELVKHGATLLFLDVPQYTLVGIDTQIFAVGPAFKGIKMIPPGIHFVFYSSSTR 60

Query: 61  DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEDDEERYTQAVRNLEFDKQLGPYN 120
           DG+EFSP IGFF+D  PS+VIVRKW+QQ+E L KVSE++EERY+QAVR+LEFDK LGPYN
Sbjct: 61  DGREFSPTIGFFVDVAPSQVIVRKWNQQDEWLTKVSEEEEERYSQAVRSLEFDKNLGPYN 120

Query: 121 LSHYEDWKRLSNFITKSIIERLEPIGGEITVECENEMVKSTPKVPMEKALDEQLKASTSA 180
           L  Y +W+ LSN+ITK ++E+ EP+GGEITV  E+ ++K  PK  ME ALD Q+K S   
Sbjct: 121 LKQYGEWRHLSNYITKDVVEKFEPVGGEITVTYESAILKGGPKTAMEIALDTQMKKSKFT 180

Query: 181 TSVGRSQRKGC--YYTTIPRVVKCKGISGQELTSLNLDKTQLLETLLAKDYGGSEDLLLG 238
           TS    Q KG   YYT+IPR++K KG+SGQELTS+NLDKTQLLE++L+K+Y  SEDLLLG
Sbjct: 181 TS-STEQPKGNRFYYTSIPRIIKHKGMSGQELTSMNLDKTQLLESVLSKEYKDSEDLLLG 239

Query: 239 ELQFAFIAFLMGQSLEAFLQWKSLVSLLLGCTEAPFRTRTQLFTKFIRVIFYQLKYGLQK 298
           ELQF+F+AFLMGQSLE+F+QWKS+VSLLLGCT APF+TR+QLFTKFI+VI++QLKYGLQK
Sbjct: 240 ELQFSFVAFLMGQSLESFMQWKSIVSLLLGCTSAPFQTRSQLFTKFIKVIYHQLKYGLQK 299

Query: 299 DRVD-ETG-PAXXXXXXXXXXXXXHHLCKDFFXXXXXXXXXXXXXXKWTRKFKELLESNL 356
           +    ETG  A             H LCKDFF               WTRKFKELLE+ L
Sbjct: 300 ENSGPETGIHALLDDSWLASDSFLHFLCKDFFALVEETSVVDGDLLSWTRKFKELLENRL 359

Query: 357 GWKFQQNSAVDGIYFEDNDEFAPVVEMLDDEEA 389
           GW+FQ+ SAVDGIYFE++DE+APVVEMLD+   
Sbjct: 360 GWEFQKKSAVDGIYFEEDDEYAPVVEMLDESHG 392


>AT1G66510.1 | Symbols:  | AAR2 protein family |
           chr1:24812881-24815804 FORWARD LENGTH=399
          Length = 399

 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/393 (65%), Positives = 311/393 (79%), Gaps = 5/393 (1%)

Query: 1   MDSSTALELVKHGVSLLFLDVPQYTLIAIDTQMFSVGPAFKGIKMIPPGTHFVYYSSSTR 60
           MDS  ALELVKHG +LLFLDVPQYTL+ IDTQ+F+VGPAFKGIKMIPPG HFV+YSSSTR
Sbjct: 1   MDSEKALELVKHGATLLFLDVPQYTLVGIDTQIFAVGPAFKGIKMIPPGIHFVFYSSSTR 60

Query: 61  DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEDDEERYTQAVRNLEFDKQLGPYN 120
           DG+EFSP IGFF+D  PS+VIVRKW+QQ+E L KVSE++EERY+QAVR+LEFDK LGPYN
Sbjct: 61  DGREFSPTIGFFVDVAPSQVIVRKWNQQDEWLTKVSEEEEERYSQAVRSLEFDKNLGPYN 120

Query: 121 LSHYEDWKRLSNFITKSIIERLEPIGGEITVECENEMVKSTPKVPMEKALDEQLKASTSA 180
           L  Y +W+ LSN+ITK ++E+ EP+GGEITV  E+ ++K  PK  ME ALD Q+K S   
Sbjct: 121 LKQYGEWRHLSNYITKDVVEKFEPVGGEITVTYESAILKGGPKTAMEIALDTQMKKSKFT 180

Query: 181 TSVGRSQRKGC--YYTTIPRVVKCKGISGQELTSLNLDKTQLLETLLAKDYGGSEDLLLG 238
           TS    Q KG   YYT+IPR++K KG+SGQELTS+NLDKTQLLE++L+K+Y  SEDLLLG
Sbjct: 181 TS-STEQPKGNRFYYTSIPRIIKHKGMSGQELTSMNLDKTQLLESVLSKEYKDSEDLLLG 239

Query: 239 ELQFAFIAFLMGQSLEAFLQWKSLVSLLLGCTEAPFRTRTQLFTKFIRVIFYQLKYGLQK 298
           ELQF+F+AFLMGQSLE+F+QWKS+VSLLLGCT APF+TR+QLFTKFI+VI++QLKYGLQK
Sbjct: 240 ELQFSFVAFLMGQSLESFMQWKSIVSLLLGCTSAPFQTRSQLFTKFIKVIYHQLKYGLQK 299

Query: 299 DRVD-ETG-PAXXXXXXXXXXXXXHHLCKDFFXXXXXXXXXXXXXXKWTRKFKELLESNL 356
           +    ETG  A             H LCKDFF               WTRKFKELLE+ L
Sbjct: 300 ENSGPETGIHALLDDSWLASDSFLHFLCKDFFALVEETSVVDGDLLSWTRKFKELLENRL 359

Query: 357 GWKFQQNSAVDGIYFEDNDEFAPVVEMLDDEEA 389
           GW+FQ+ SAVDGIYFE++DE+APVVEMLD+   
Sbjct: 360 GWEFQKKSAVDGIYFEEDDEYAPVVEMLDESHG 392


>AT1G66510.3 | Symbols:  | AAR2 protein family |
           chr1:24813322-24815804 FORWARD LENGTH=355
          Length = 355

 Score =  454 bits (1169), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/346 (64%), Positives = 271/346 (78%), Gaps = 5/346 (1%)

Query: 45  MIPPGTHFVYYSSSTRDGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEDDEERYT 104
           MIPPG HFV+YSSSTRDG+EFSP IGFF+D  PS+VIVRKW+QQ+E L KVSE++EERY+
Sbjct: 1   MIPPGIHFVFYSSSTRDGREFSPTIGFFVDVAPSQVIVRKWNQQDEWLTKVSEEEEERYS 60

Query: 105 QAVRNLEFDKQLGPYNLSHYEDWKRLSNFITKSIIERLEPIGGEITVECENEMVKSTPKV 164
           QAVR+LEFDK LGPYNL  Y +W+ LSN+ITK ++E+ EP+GGEITV  E+ ++K  PK 
Sbjct: 61  QAVRSLEFDKNLGPYNLKQYGEWRHLSNYITKDVVEKFEPVGGEITVTYESAILKGGPKT 120

Query: 165 PMEKALDEQLKASTSATSVGRSQRKGC--YYTTIPRVVKCKGISGQELTSLNLDKTQLLE 222
            ME ALD Q+K S   TS    Q KG   YYT+IPR++K KG+SGQELTS+NLDKTQLLE
Sbjct: 121 AMEIALDTQMKKSKFTTS-STEQPKGNRFYYTSIPRIIKHKGMSGQELTSMNLDKTQLLE 179

Query: 223 TLLAKDYGGSEDLLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLLGCTEAPFRTRTQLFT 282
           ++L+K+Y  SEDLLLGELQF+F+AFLMGQSLE+F+QWKS+VSLLLGCT APF+TR+QLFT
Sbjct: 180 SVLSKEYKDSEDLLLGELQFSFVAFLMGQSLESFMQWKSIVSLLLGCTSAPFQTRSQLFT 239

Query: 283 KFIRVIFYQLKYGLQKDRVD-ETG-PAXXXXXXXXXXXXXHHLCKDFFXXXXXXXXXXXX 340
           KFI+VI++QLKYGLQK+    ETG  A             H LCKDFF            
Sbjct: 240 KFIKVIYHQLKYGLQKENSGPETGIHALLDDSWLASDSFLHFLCKDFFALVEETSVVDGD 299

Query: 341 XXKWTRKFKELLESNLGWKFQQNSAVDGIYFEDNDEFAPVVEMLDD 386
              WTRKFKELLE+ LGW+FQ+ SAVDGIYFE++DE+APVVEMLD+
Sbjct: 300 LLSWTRKFKELLENRLGWEFQKKSAVDGIYFEEDDEYAPVVEMLDE 345