Miyakogusa Predicted Gene

Lj2g3v2560100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2560100.1 Non Chatacterized Hit- tr|I1MBW8|I1MBW8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52458
PE,77.29,0,SUBFAMILY NOT NAMED,NULL; NUCLEOLAR COMPLEX PROTEIN 4,NULL;
seg,NULL; CBF,CCAAT-binding factor,CUFF.39096.1
         (453 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17250.1 | Symbols: EMB2762 | CCAAT-binding factor | chr2:749...   468   e-132

>AT2G17250.1 | Symbols: EMB2762 | CCAAT-binding factor |
           chr2:7499573-7502957 FORWARD LENGTH=577
          Length = 577

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/423 (56%), Positives = 309/423 (73%), Gaps = 10/423 (2%)

Query: 25  DIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQLXXXXXXX 84
           ++K+LG  LL+S SHINNLPLLLTFVSP SPP+ ++ESL+SL SFF   L QL       
Sbjct: 19  ELKSLGHDLLTSRSHINNLPLLLTFVSPESPPQFVVESLLSLQSFFTPLLSQLPPTSSSP 78

Query: 85  XXXXXXX-QFIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEFIKVANGGSF 143
                   + ++  WLRSKFDEF+K L+DVL S QS++ ++  VL T MEF+K+ N G F
Sbjct: 79  SSTKTEDPEVVFKAWLRSKFDEFVKLLLDVLVSQQSEDSLRGIVLGTLMEFVKLLNAGRF 138

Query: 144 HSALYHRLLHSIVHSTSSPAFLVDLLASKYFKYIDVRYFTFISLEKLIRTMEGKDISGAY 203
           HS++YHRLL +I+HS       +D+L SKYFKYIDVRYFT+IS+EK ++T+E    +   
Sbjct: 139 HSSIYHRLLDAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEASVSADRT 198

Query: 204 RTDEDQLSSN----MEYVIDNLYYTLSHVPPLEGSDNTSVLEMWSRSESDQKQLSGDMDE 259
             + ++  S+    +E  +  +Y  LS +PP E     S  EMWS S+    +   D   
Sbjct: 199 VIENNEAESDSKESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISEKPTD--- 255

Query: 260 DGKQLNPKKLANNVLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVLVNLHQAVIPHL 319
             K+   +K  + +LS A I+K+MKLKFTKAWI++LRLPL +D+YKEVL ++H  VIPHL
Sbjct: 256 --KKKKTEKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHL 313

Query: 320 SNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTKYGLEYPKFYEKLYALLVPSIFLEKHR 379
           SNP MLCDFLT+SYD+GGVVSVMALSSLF+LMT++GLEYP FYEKLYALLVPS+F+ KHR
Sbjct: 314 SNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHR 373

Query: 380 ARFFELLDSCLKSPLLPAYLAASFTKKLSRLLLSVPPSGALVITALIHNVLRRHPSINCL 439
           A+F +LLD+CLKS +LPAYLAASFTKKLSRL LS+PP+G+LVITALI+N+LRR+P+IN L
Sbjct: 374 AKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHL 433

Query: 440 VHR 442
           V  
Sbjct: 434 VQE 436