Miyakogusa Predicted Gene

Lj2g3v2560030.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2560030.2 Non Chatacterized Hit- tr|H9VUV5|H9VUV5_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,81.97,0.00000000000002,seg,NULL,CUFF.39148.2
         (440 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G66330.2 | Symbols:  | senescence-associated family protein |...   354   8e-98
AT1G66330.1 | Symbols:  | senescence-associated family protein |...   354   8e-98

>AT1G66330.2 | Symbols:  | senescence-associated family protein |
           chr1:24729880-24732144 REVERSE LENGTH=417
          Length = 417

 Score =  354 bits (908), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 190/300 (63%), Positives = 214/300 (71%), Gaps = 17/300 (5%)

Query: 132 CKFVFNDAKF-----------LSRGIMSLDARARQDVALLGTEFLKLDARAREDTEKIDR 180
            ++V NDAKF           LSRGIM LDARARQDVA+LG+ FLKLDARAREDTEKIDR
Sbjct: 106 VEYVSNDAKFVNERARNDFVLLSRGIMRLDARARQDVAILGSGFLKLDARAREDTEKIDR 165

Query: 181 GVKEKAGRLNRIATILKDIAKSRLKSAADEHWSDGALEADLRLADFRAKQRAMEDALMAL 240
            VK KA RL+ IATI K+IA+S+LK+AAD+HWSDGALEADLR ADFRAKQRAMEDALMAL
Sbjct: 166 DVKRKAERLHHIATIFKNIAESKLKNAADKHWSDGALEADLRRADFRAKQRAMEDALMAL 225

Query: 241 ELIINIHDRMVSKMYNFPLRIVKGSLSENNVRGQIMLEKNGKATDSFPGDVTTERITALQ 300
           E I NIHD MV+KM +  +       SE     +I LEKNG A   FPG+V+++RI+A++
Sbjct: 226 EFIKNIHDMMVNKMVDSLV------TSETGTTDRISLEKNGIALGFFPGEVSSDRISAIE 279

Query: 301 EAYWSMASALSEADGIDYXXXXXXXXXXXXXXXXXAMDGKQSVSLLAECSSSPDVSTRRX 360
           EAY SMASALSEADGIDY                 AMDGK S SLLAECSSSPDV+TR+ 
Sbjct: 280 EAYKSMASALSEADGIDYTDPEELELLVTTLIDLDAMDGKSSASLLAECSSSPDVNTRKA 339

Query: 361 XXXXXXXXPSMWTLGNAGMGALQRLAEDSNPXXXXXXXXXXYELKKQWEIEEGDSWRFMM 420
                   PSMWTLGNAGMGALQRLAEDSNP            LKKQWE+EEGDS RFMM
Sbjct: 340 LANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAASRAINALKKQWEVEEGDSLRFMM 399


>AT1G66330.1 | Symbols:  | senescence-associated family protein |
           chr1:24729880-24732144 REVERSE LENGTH=417
          Length = 417

 Score =  354 bits (908), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 190/300 (63%), Positives = 214/300 (71%), Gaps = 17/300 (5%)

Query: 132 CKFVFNDAKF-----------LSRGIMSLDARARQDVALLGTEFLKLDARAREDTEKIDR 180
            ++V NDAKF           LSRGIM LDARARQDVA+LG+ FLKLDARAREDTEKIDR
Sbjct: 106 VEYVSNDAKFVNERARNDFVLLSRGIMRLDARARQDVAILGSGFLKLDARAREDTEKIDR 165

Query: 181 GVKEKAGRLNRIATILKDIAKSRLKSAADEHWSDGALEADLRLADFRAKQRAMEDALMAL 240
            VK KA RL+ IATI K+IA+S+LK+AAD+HWSDGALEADLR ADFRAKQRAMEDALMAL
Sbjct: 166 DVKRKAERLHHIATIFKNIAESKLKNAADKHWSDGALEADLRRADFRAKQRAMEDALMAL 225

Query: 241 ELIINIHDRMVSKMYNFPLRIVKGSLSENNVRGQIMLEKNGKATDSFPGDVTTERITALQ 300
           E I NIHD MV+KM +  +       SE     +I LEKNG A   FPG+V+++RI+A++
Sbjct: 226 EFIKNIHDMMVNKMVDSLV------TSETGTTDRISLEKNGIALGFFPGEVSSDRISAIE 279

Query: 301 EAYWSMASALSEADGIDYXXXXXXXXXXXXXXXXXAMDGKQSVSLLAECSSSPDVSTRRX 360
           EAY SMASALSEADGIDY                 AMDGK S SLLAECSSSPDV+TR+ 
Sbjct: 280 EAYKSMASALSEADGIDYTDPEELELLVTTLIDLDAMDGKSSASLLAECSSSPDVNTRKA 339

Query: 361 XXXXXXXXPSMWTLGNAGMGALQRLAEDSNPXXXXXXXXXXYELKKQWEIEEGDSWRFMM 420
                   PSMWTLGNAGMGALQRLAEDSNP            LKKQWE+EEGDS RFMM
Sbjct: 340 LANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAASRAINALKKQWEVEEGDSLRFMM 399