Miyakogusa Predicted Gene

Lj2g3v2560020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2560020.1 Non Chatacterized Hit- tr|F4INW9|F4INW9_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,33.73,2e-18,coiled-coil,NULL; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.39085.1
         (574 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16720.1 | Symbols:  | Protein of unknown function, DUF593 | ...   131   1e-30
AT1G70750.1 | Symbols:  | Protein of unknown function, DUF593 | ...    82   1e-15
AT1G74830.1 | Symbols:  | Protein of unknown function, DUF593 | ...    78   2e-14
AT1G08800.2 | Symbols:  | Protein of unknown function, DUF593 | ...    72   1e-12
AT1G08800.1 | Symbols:  | Protein of unknown function, DUF593 | ...    72   1e-12
AT2G30690.1 | Symbols:  | Protein of unknown function, DUF593 | ...    67   3e-11
AT1G18990.1 | Symbols:  | Protein of unknown function, DUF593 | ...    64   3e-10

>AT5G16720.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr5:5494309-5496562 FORWARD LENGTH=675
          Length = 675

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 119/248 (47%), Gaps = 41/248 (16%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           MA N FAT L RNTN+I   LVYA LEW                 +FA + GL+  C+ C
Sbjct: 1   MAANNFATKLSRNTNRITVILVYAFLEWLLMFFIFLNSFFTYFIVKFASFFGLKQVCLLC 60

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHD 120
            ++D +  +   +    +ELLC+ H AE++ L +C  H  L+E+ N+C DC     N+ +
Sbjct: 61  PKLDRIFERKPENRFTYKELLCQNHIAELASLSFCRTHGKLSESANLCSDC----SNREE 116

Query: 121 ENSFGVRHRIALISWVSHESGENVKRCSCCNESLRSKIYPPYLLLNPS-WGDG-NCTSKG 178
           E S      I L              C+CC +SL  K YP YLLL  S WG        G
Sbjct: 117 EQS-----NIGL------------GFCTCCQKSLADKPYPNYLLLKSSIWGKTLGDREDG 159

Query: 179 SLIVESIDGEKEGDK--------DLDFERNNGDGDHDDEGVVADEHQ---ILSDIESF-- 225
            LI+E ID +K GD          L F R     D  +EG   D+ Q   ++SD+ES+  
Sbjct: 160 GLILEMIDDDKFGDGFEIDRESYPLGFFR-----DKAEEGKKQDQQQNGEVISDVESYGL 214

Query: 226 ILRETAED 233
            LRE +E+
Sbjct: 215 SLREVSEE 222


>AT1G70750.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:26680728-26683147 REVERSE LENGTH=749
          Length = 749

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 12/116 (10%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           MA NKFAT++HR TN+I   LVYA LEW                 RFA + GL+ PC++C
Sbjct: 1   MAANKFATLIHRKTNRITLILVYAFLEWSLIFFILLNSLFSYFILRFADYFGLKRPCLFC 60

Query: 61  SRVDHVLH-QGKSSNLFSRELLCETHAAEI-------SKLGYCSNHQTLAEAHNMC 108
           SR+D      GKS +   R+LLC+ HA ++       S  G+   H  L   H  C
Sbjct: 61  SRLDRFFDASGKSPS--HRDLLCDDHALQLHSKPVEESNCGFGEFHNDL--VHRGC 112


>AT1G74830.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:28113469-28115193 REVERSE LENGTH=542
          Length = 542

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           M+   F   + +    +   L+Y VLEW                 +FAK+  L  PC+ C
Sbjct: 20  MSKRSFKKFVEQELGSLPHFLIYTVLEWSLIVFLFIDGVIAFLSNQFAKFFDLNIPCLLC 79

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHD 120
           +R+DH+L   +    +  E +C++H  ++S L YC  H+ L+E  +MCE C  S   + D
Sbjct: 80  TRIDHIL-VPRDPQFYYNESICDSHKKKVSSLAYCHVHKKLSEIKHMCEGCLLSFATEKD 138

Query: 121 ENSFGVRHRIALI 133
            +    +  I ++
Sbjct: 139 SDCDTYKSLIGIL 151


>AT1G08800.2 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:2813578-2817078 REVERSE LENGTH=1113
          Length = 1113

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 21  LVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNLFSREL 80
           L  A  EW                 RFA +  LQ PC+ CS +DH+L + K       ++
Sbjct: 10  LALAFNEWLLMFMLFVNSIFSYVIARFADYSELQSPCLMCSNLDHILRRTKDLKKTHWDI 69

Query: 81  LCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISWVSHES 140
           +C  H +EIS L YC  H  L +   MCE C  S    +  N+   R  +  +   SH  
Sbjct: 70  ICSKHKSEISSLVYCHAHGKLVDVRGMCETCLFSFATTNKSNAETYRLLVGKLGEDSHFG 129

Query: 141 GEN----------VKRCSCCNE 152
            ++          +  C+CCN+
Sbjct: 130 SKSDRSKYPNCSKLTDCTCCNQ 151


>AT1G08800.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:2813578-2817078 REVERSE LENGTH=1113
          Length = 1113

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 21  LVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNLFSREL 80
           L  A  EW                 RFA +  LQ PC+ CS +DH+L + K       ++
Sbjct: 10  LALAFNEWLLMFMLFVNSIFSYVIARFADYSELQSPCLMCSNLDHILRRTKDLKKTHWDI 69

Query: 81  LCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISWVSHES 140
           +C  H +EIS L YC  H  L +   MCE C  S    +  N+   R  +  +   SH  
Sbjct: 70  ICSKHKSEISSLVYCHAHGKLVDVRGMCETCLFSFATTNKSNAETYRLLVGKLGEDSHFG 129

Query: 141 GEN----------VKRCSCCNE 152
            ++          +  C+CCN+
Sbjct: 130 SKSDRSKYPNCSKLTDCTCCNQ 151


>AT2G30690.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr2:13076229-13078595 FORWARD LENGTH=760
          Length = 760

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 12/166 (7%)

Query: 15  NKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSN 74
           N     L YA  EW                  FA++  LQ PC  CS++ H LH      
Sbjct: 13  NGFAPVLTYAACEWFLILLMFIDALLSYLLVWFARYCRLQMPCFLCSKLLHPLHW----- 67

Query: 75  LFSRELLCETHAAEISKLGYCSNH-QTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALI 133
              R LLC  H +E+S    C NH   LA+   MC+DC  S       N    R  +  +
Sbjct: 68  ---RFLLCRNHRSEVSSYMSCQNHGNNLADCRGMCDDCLLSFTKMTGPNPDMNRLLLGKL 124

Query: 134 SW--VSHESGENVKRCSCCNESLRSKIYPPYLLLNPSWGDGNCTSK 177
            +  +S     + + CSCCN+  R++ +   L+   S G  N +SK
Sbjct: 125 GYDLLSRSHFAHPRSCSCCNKPWRTRHHTQRLIRLGSRG-RNSSSK 169


>AT1G18990.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:6558778-6560432 REVERSE LENGTH=524
          Length = 524

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           M+   F   +          L+YA+LEW                 + AK+  L+ PC+ C
Sbjct: 1   MSNRSFKNFIEEELGTFPQFLIYALLEWILIIILFIDGFLAFFSNQIAKFFDLKIPCLLC 60

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFAS 114
           +R+DHVL   ++ + +  + +C+ H   +S L YC  H+ L+E   MCE C  S
Sbjct: 61  TRLDHVL-VSRNPDFYYNDSICDAHKKNVSSLAYCHVHKKLSEIKRMCEGCLLS 113