Miyakogusa Predicted Gene
- Lj2g3v2554840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2554840.1 Non Chatacterized Hit- tr|J3MK59|J3MK59_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,26.59,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
seg,NU,CUFF.39071.1
(452 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 6e-51
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 6e-51
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 187 9e-48
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 4e-45
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 177 2e-44
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 5e-42
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 165 7e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 9e-41
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 1e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 7e-40
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 7e-40
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 1e-39
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 158 7e-39
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 8e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 158 9e-39
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 7e-37
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 7e-37
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 9e-37
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 9e-37
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 7e-36
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 3e-35
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 3e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 142 5e-34
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 141 7e-34
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 140 1e-33
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 7e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 9e-33
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 135 5e-32
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 135 6e-32
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 125 9e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 4e-28
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 122 4e-28
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 8e-27
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 6e-26
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 115 7e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 114 2e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 105 9e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 104 1e-22
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 104 2e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 103 2e-22
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 103 4e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 9e-22
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 100 2e-21
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 99 5e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 5e-21
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 9e-21
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 2e-20
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 93 5e-19
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 91 2e-18
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 90 4e-18
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 89 6e-18
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 88 1e-17
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 88 1e-17
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 88 2e-17
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 87 2e-17
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 87 3e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 86 4e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 86 5e-17
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 86 8e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 2e-16
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 83 5e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 82 5e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 80 2e-15
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 80 3e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 80 4e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 80 4e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 79 5e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 79 7e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 79 7e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 8e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 78 1e-14
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 78 1e-14
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 78 2e-14
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 76 5e-14
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 8e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 75 8e-14
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 74 2e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 73 4e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 73 5e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 72 6e-13
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 72 6e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 71 1e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 8e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 69 8e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 62 6e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 60 3e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 60 4e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 59 1e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 50 4e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/442 (46%), Positives = 277/442 (62%), Gaps = 32/442 (7%)
Query: 37 SSWYNPPPPSKHHE----ILCTISEAINTVHTSEIYNKPPLDYSHN---PRIKRILPSIT 89
S+WY+ S +L +S AI + Y PPL++S P I+++LPS++
Sbjct: 27 STWYSQESVSAADNDDDPVLVKLSVAIR-----DSYKDPPLEFSSFTDCPSIRKVLPSLS 81
Query: 90 PFLVTKXXXXXXXXXXXXXXXXXXXWLATRPPFR--------------------EAHSLL 129
V +++++P FR EA SL+
Sbjct: 82 VHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLI 141
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
+VSRKG SASS+F S ++ T + D L+ YTD GF+ DA+QC RL RK
Sbjct: 142 ELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRF 201
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+P+R C NLL MMK+ P G W FY+EIL+ G+P VY+FN+LM+ FCK G+I A+
Sbjct: 202 DVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQK 261
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
VFDEI KR L+PTVVSFNTLI+GYCK GN++EGFRLK ME R PDVFT+SALIN LC
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
KE++ D A+ LFDEMC+RGL+PN V FTTLI G ++G++DL + +Q ML +G++PD+V
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
YN L+NG CK GDL AR +++ M RGL+PDKIT+TTL+DG C+ GD+E+ALEI+K M
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 430 VEEGIELDAVAFTMEEVAMQKE 451
+ GIELD V F+ M KE
Sbjct: 442 DQNGIELDRVGFSALVCGMCKE 463
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 120/199 (60%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E Y ++L G P + L+N L++GFCK GD+ +AR + D + +R LRP +++ TLI G+
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C+ G+VE ++ M+ I D FSAL+ G+CKE R +A EM R G+ P+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+T ++D CK G K + M G P +VTYN L+NGLCK+G +K A LL+
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 394 MNARGLKPDKITFTTLMDG 412
M G+ PD IT+ TL++G
Sbjct: 546 MLNIGVVPDDITYNTLLEG 564
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 150/288 (52%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +V+ F+ LI+ Y G +D+ + + K + + L+ + K +
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ + G P +F L+HG + G+I + + ++ + L+P +V +NTL++G+C
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K+G++ + M + PD T++ LI+G C+ + A + EM + G+ + V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
F+ L+ G CK+G+V A + + ML GI+PD VTY +++ CK GD + KLL EM
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G P +T+ L++G CK G M++A + M+ G+ D + +
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ + LI + G ++ A++ + + + +++ L+ M K + E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+L G P + ++M FCK GD ++ + E+ P+VV++N L++G CK G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
++ L M + + PD T++ L+ G + + S +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 180/321 (56%), Gaps = 17/321 (5%)
Query: 123 REAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR 182
+EAH LL L+ KG+ V+ + +++ Y G +D + I
Sbjct: 263 KEAHHLL-LLMELKGY----------------TPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
++++K L+ +++ + ++ + E + E++ G P ++ L+ GFCK G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
DIR+A F E+ R + P V+++ +ISG+C+ G++ E +L M + + PD TF+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
LING CK +A + + M + G PN VT+TTLIDG CK+G +D A + M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G++P++ TYN+++NGLCK G+++EA KL+ E A GL D +T+TTLMD CK G+M+ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 423 LEIKKRMVEEGIELDAVAFTM 443
EI K M+ +G++ V F +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNV 566
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 161/284 (56%), Gaps = 1/284 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMK-VKPPGPSWEFYLE 218
VFDV D G + +A + + L + + +C L + K + + E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
E G V +N+++H C++G I+ A + + + P V+S++T+++GYC+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ ++L VM+ + + P+ + + ++I LC+ + EA F EM R+G++P+ V +TT
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LIDG CK G + A K F M + I PD++TY A+I+G C++GD+ EA KL +EM +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
L+PD +TFT L++G CK G M+ A + M++ G + V +T
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
++G A+S F + + VL + +IS + G M +A + + K L+
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
L+ K ++ + +++ G P V + L+ G CK GD+ SA + E+
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
K L+P + ++N++++G CKSGN+EE +L G E+ + D T++ L++ CK
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+A + EM +GL P VTF L++G C G ++ K ML +GI P+ T+N+L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ C +LK A + +M +RG+ PD T+ L+ G CK +M+ A + + M +G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 435 ELDAVAFTM 443
+ +++
Sbjct: 663 SVSVSTYSV 671
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY------MMKVKPPGPS 212
+ F LI+ Y +G M DA R N I N++ Y + K +
Sbjct: 422 VTFTELINGYCKAGHMKDAF------RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
E E+ + G P ++ +N +++G CK G+I A + E L V++ TL+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
YCKSG +++ + M + + P + TF+ L+NG C ++ L + M +G+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
TF +L+ C + A ++ M +G+ PD TY L+ G CK ++KEA L
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
EM +G T++ L+ G K A E+ +M EG+ D F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + LI G +D A + + + K LQ + +++ + K + +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E G + LM +CK G++ A+ + E+ + L+PT+V+FN L++G+C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E+G +L M ++ I P+ TF++L+ C + A ++ +MC RG+ P+G T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+ G CK + A FQ M +G + TY+ LI G K EAR++ ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 397 RGLKPDKITFTTLMD 411
GL DK F D
Sbjct: 695 EGLAADKEIFDFFSD 709
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL-----LRYMMKVKPPGPSW 213
+ + L+ AY SG MD A + ++ + K LQ + L L M++ +W
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+L G P FN L+ +C ++++A ++ ++ R + P ++ L+ G+
Sbjct: 587 -----MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
CK+ N++E + L M+ + V T+S LI G K + EA +FD+M R GL +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 334 VTFTTLIDGQCKDGKVD 350
F D + K + D
Sbjct: 702 EIFDFFSDTKYKGKRPD 718
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 180/321 (56%), Gaps = 17/321 (5%)
Query: 123 REAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR 182
+EAH LL L+ KG+ V+ + +++ Y G +D + I
Sbjct: 263 KEAHHLL-LLMELKGY----------------TPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
++++K L+ +++ + ++ + E + E++ G P ++ L+ GFCK G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
DIR+A F E+ R + P V+++ +ISG+C+ G++ E +L M + + PD TF+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
LING CK +A + + M + G PN VT+TTLIDG CK+G +D A + M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G++P++ TYN+++NGLCK G+++EA KL+ E A GL D +T+TTLMD CK G+M+ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 423 LEIKKRMVEEGIELDAVAFTM 443
EI K M+ +G++ V F +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNV 566
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 161/284 (56%), Gaps = 1/284 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMK-VKPPGPSWEFYLE 218
VFDV D G + +A + + L + + +C L + K + + E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
E G V +N+++H C++G I+ A + + + P V+S++T+++GYC+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ ++L VM+ + + P+ + + ++I LC+ + EA F EM R+G++P+ V +TT
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LIDG CK G + A K F M + I PD++TY A+I+G C++GD+ EA KL +EM +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
L+PD +TFT L++G CK G M+ A + M++ G + V +T
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
++G A+S F + + VL + +IS + G M +A + + K L+
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
L+ K ++ + +++ G P V + L+ G CK GD+ SA + E+
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
K L+P + ++N++++G CKSGN+EE +L G E+ + D T++ L++ CK
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+A + EM +GL P VTF L++G C G ++ K ML +GI P+ T+N+L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ C +LK A + +M +RG+ PD T+ L+ G CK +M+ A + + M +G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 435 ELDAVAFTM 443
+ +++
Sbjct: 663 SVSVSTYSV 671
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY------MMKVKPPGPS 212
+ F LI+ Y +G M DA R N I N++ Y + K +
Sbjct: 422 VTFTELINGYCKAGHMKDAF------RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
E E+ + G P ++ +N +++G CK G+I A + E L V++ TL+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
YCKSG +++ + M + + P + TF+ L+NG C ++ L + M +G+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
TF +L+ C + A ++ M +G+ PD TY L+ G CK ++KEA L
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
EM +G T++ L+ G K A E+ +M EG+ D F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + LI G +D A + + + K LQ + +++ + K + +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E G + LM +CK G++ A+ + E+ + L+PT+V+FN L++G+C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E+G +L M ++ I P+ TF++L+ C + A ++ +MC RG+ P+G T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+ G CK + A FQ M +G + TY+ LI G K EAR++ ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 397 RGLKPDKITFTTLMD 411
GL DK F D
Sbjct: 695 EGLAADKEIFDFFSD 709
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL-----LRYMMKVKPPGPSW 213
+ + L+ AY SG MD A + ++ + K LQ + L L M++ +W
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+L G P FN L+ +C ++++A ++ ++ R + P ++ L+ G+
Sbjct: 587 -----MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
CK+ N++E + L M+ + V T+S LI G K + EA +FD+M R GL +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 334 VTFTTLIDGQCKDGKVD 350
F D + K + D
Sbjct: 702 EIFDFFSDTKYKGKRPD 718
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 185/327 (56%), Gaps = 2/327 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVL-VFDVLISAYTDSGFM 174
L F+ AH LL L R+ S L + + V VF L+ Y +G +
Sbjct: 90 LTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMI 149
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
+D++ +R L+ L+AC LL ++K + W+ + ++++ G ++++NVL
Sbjct: 150 NDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVL 209
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+H K GD A + E+ ++ + P + ++NTLIS YCK E ++ ME +
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P++ T+++ I+G +E R EA LF E+ + + N VT+TTLIDG C+ +D AL+
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
++M +G P +VTYN+++ LC+ G ++EA +LL EM+ + ++PD IT TL++ C
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAF 441
K DM SA+++KK+M+E G++LD ++
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSY 415
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
+P + LL LV ++ + +F ++ + ++ V++VL+ A + SG + A
Sbjct: 165 KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVK-LGVVANIHVYNVLVHACSKSGDPEKAE 223
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ + + +K + + L+ K + + G P + +N +HGF
Sbjct: 224 KLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ G +R A +F EI K + V++ TLI GYC+ +++E RL+ VMES P V
Sbjct: 284 SREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T+++++ LC++ R EAN L EM + + P+ +T TLI+ CK + A+K +
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
M++ G++ D+ +Y ALI+G CKV +L+ A++ L M +G P T++ L+DG
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 218 EILEC-GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++E G+ P V +N ++ C+ G IR A + E+ +K+ P ++ NTLI+ YCK
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++ ++K M + D++++ ALI+G CK + A M +G P T+
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATY 450
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ L+DG K D K + +G+ D+ Y LI +CK+ + A+ L M
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESA 422
+GL D + FTT+ + G + A
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+ L+ G+C++ DI A + + + R P VV++N+++ C+ G + E RL M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++I PD T + LIN CK A + +M GL + ++ LI G CK +++
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A ++ M+++G P TY+ L++G E KLL E RGL D + L+
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
CK ++ A + + M ++G+ D+V FT
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFT 521
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++ ++ + G + +A + + + K ++ C L+ K++ + +
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E G +Y + L+HGFCKV ++ +A+ + ++ P +++ L+ G+
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E +L E + DV + LI +CK + D A LF+ M ++GLV + V FT
Sbjct: 462 KQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFT 521
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
T+ + GKV A F +M ++ + +L Y ++
Sbjct: 522 TMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N L++ +CK+ D+ SA V ++ + L+ + S+ LI G+CK +E M
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE 440
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
+ P T+S L++G +++ DE L +E +RGL + + LI CK +VD
Sbjct: 441 KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A F+ M +G+ D V + + + G + EA L + M R L + + ++
Sbjct: 501 AKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISA 560
Query: 412 GCCKDGDM 419
D D+
Sbjct: 561 SYAGDNDV 568
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 168/303 (55%), Gaps = 2/303 (0%)
Query: 141 ASSLFASFLQTMPTQQSVL-VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL 199
AS +F S +T S VFD+++ +Y+ +D A+ + L + + + +
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 200 LRYMMKVKPPGPSWE-FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L ++ K E + E+LE P V+ +N+L+ GFC G+I A +FD++ +
Sbjct: 176 LDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG 235
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
P VV++NTLI GYCK +++GF+L M + + P++ +++ +INGLC+E R E +
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+ EM RRG + VT+ TLI G CK+G AL ML G+ P ++TY +LI+ +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
CK G++ A + L++M RGL P++ T+TTL+DG + G M A + + M + G
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 439 VAF 441
V +
Sbjct: 416 VTY 418
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 167/309 (54%), Gaps = 1/309 (0%)
Query: 134 SRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPL 193
S++ A ++F L++ +V +++LI + +G +D A+ + K +
Sbjct: 182 SKRNISFAENVFKEMLES-QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE 253
L+ K++ ++ + G P + +NV+++G C+ G ++ V E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
+ +R V++NTLI GYCK GN + + M + P V T+++LI+ +CK
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
+ A D+M RGL PN T+TTL+DG + G ++ A + + M D G P +VTYNA
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LING C G +++A +L +M +GL PD ++++T++ G C+ D++ AL +K+ MVE+G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 434 IELDAVAFT 442
I+ D + ++
Sbjct: 481 IKPDTITYS 489
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 166/302 (54%), Gaps = 15/302 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ + LI + +G M+ A++ + +R + L R L+ + ++
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ + G+ P V +N L++G C G + A V +++ ++ L P VVS++T++SG+C+S
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+V+E R+K M + I PD T+S+LI G C++ R+ EA L++EM R GL P+ T+
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T LI+ C +G ++ AL+ M+++G+ PD+VTY+ LINGL K +EA++LL ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 397 RGLKPDKITFTTLMDGC---------------CKDGDMESALEIKKRMVEEGIELDAVAF 441
P +T+ TL++ C C G M A ++ + M+ + + D A+
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 442 TM 443
+
Sbjct: 644 NI 645
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 157/287 (54%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++V+I+ G M + + + ++ + L++ K + +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+L G P V + L+H CK G++ A D++ R L P ++ TL+ G+ +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + E +R+ M P V T++ALING C + ++A + ++M +GL P+ V++
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+T++ G C+ VD AL+ + M+++GI+PD +TY++LI G C+ KEA L EM
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
GL PD+ T+T L++ C +GD+E AL++ MVE+G+ D V +++
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ ++ LI+ + +G M+DA+ + +++K L + + +L + +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++E G P ++ L+ GFC+ + A +++E+ + L P ++ LI+ YC
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G++E+ +L M + + PDV T+S LINGL K+SR+ EA L ++ VP+ VT+
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 337 TTLID---------------GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
TLI+ G C G + A + F+ ML + +PD YN +I+G C+
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
GD+++A L EM G +T L+ K+G
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK-VDLALKKFQIM 359
F ++ + S D+A + G +P +++ ++D + + + A F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
L+ + P++ TYN LI G C G++ A L ++M +G P+ +T+ TL+DG CK +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
+ ++ + M +G+E + +++ +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNV 280
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 170 DSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVY 229
+ G + D V L+ N Q R + LL + + PS Y ++E +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF-YEESVPSDVTYHTLIENCSNIEFK 606
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
L+ GFC G + A VF+ + + +P ++N +I G+C++G++ + + L M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
T AL+ L KE + +E N + + R + L++ ++G +
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 350 DLALKKFQIMLDQGIRPDLVT 370
D+ L M G P+ ++
Sbjct: 727 DVVLDVLAEMAKDGFLPNGIS 747
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 184/360 (51%), Gaps = 39/360 (10%)
Query: 122 FREAHSLLCFLVSRKGHG---SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
F A SLL ++S K H ++SSL ++ ++ +++V+I++Y S ++ ++
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114
Query: 179 QCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFY--------------------- 216
+ +P C N LL +++ W F+
Sbjct: 115 SYFNEMVDNGF-VPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGC 173
Query: 217 -------------LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTV 263
+E+ E G+ P V ++ L+ G CK G+I A+ +F E+ K L
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
++ LI+G K+G ++GF + M+ + +FP+++T++ ++N LCK+ R+ +A +FDE
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
M RG+ N VT+ TLI G C++ K++ A K M GI P+L+TYN LI+G C VG
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
L +A L ++ +RGL P +T+ L+ G C+ GD A ++ K M E GI+ V +T+
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+++ LI G ++ A + K L R L+ + K +E Y
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ E G P +Y +N +M+ CK G + A VFDE+ +R + +V++NTLI G C+
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ E ++ M+S+ I P++ T++ LI+G C + +A L ++ RGL P+ VT+
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+ G C+ G A K + M ++GI+P VTY LI+ + ++++A +L M
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
GL PD T++ L+ G C G M A + K MVE+ E + V +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 128/245 (52%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ LI +++A + + ++ + L L+ V G +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + +N+L+ GFC+ GD A + E+ +R ++P+ V++ LI + +S
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
N+E+ +L+ ME + PDV T+S LI+G C + + +EA+ LF M + PN V +
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I G CK+G ALK + M ++ + P++ +Y +I LCK KEA +L+ +M
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Query: 397 RGLKP 401
G+ P
Sbjct: 542 SGIDP 546
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 142/279 (50%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
++ ++ +++ G DA Q +R++ + + L+ + + + +
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + +N L+ GFC VG + A + ++ R L P++V++N L+SG+C+
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G+ ++ ME I P T++ LI+ + ++A L M GLVP+ T+
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ LI G C G+++ A + F+ M+++ P+ V YN +I G CK G A KLL EM
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ L P+ ++ +++ CK+ + A + ++M++ GI+
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
L++ S++ +++L+S + G A + ++ + ++ ++ L+ +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + L + E G P V+ ++VL+HGFC G + A +F + ++ P V +NT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+I GYCK G+ +L ME + + P+V ++ +I LCKE +S EA L ++M G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 329 LVPNGVTFTTLIDGQCKDGKV 349
+ P+ + +LI D V
Sbjct: 544 IDPS-TSILSLISRAKNDSHV 563
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 151/283 (53%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
VFD+LI Y + + +A + L+R K + + AC L+ ++++ +W Y EI
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
G VY N++++ CK G + ++ ++ + P +V++NTLIS Y G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
EE F L M + P V+T++ +INGLCK + + A +F EM R GL P+ T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ CK G V K F M + + PDLV ++++++ + G+L +A N + GL
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
PD + +T L+ G C+ G + A+ ++ M+++G +D V +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
F S +Q ++ ++ LISAY+ G M++A + + +
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM-------------------- 296
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
PG G+ P VY +N +++G CK G A+ VF E+ + L P
Sbjct: 297 ----PGK-----------GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++ +L+ CK G+V E ++ M S + PD+ FS++++ + D+A F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
GL+P+ V +T LI G C+ G + +A+ ML QG D+VTYN +++GLCK L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
EA KL NEM R L PD T T L+DG CK G++++A+E+ ++M E+ I LD V +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 164/322 (50%), Gaps = 7/322 (2%)
Query: 128 LLCF-----LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR 182
L+CF L +R G+ + ++ + ++ +++ +LI Y G + A+
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
+ ++ + + +L + K K G + + + E+ E P Y +L+ G CK+G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
++++A +F ++ ++++R VV++NTL+ G+ K G+++ + M S+ I P ++S
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
L+N LC + EA ++DEM + + P + ++I G C+ G + M+ +
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR--GLKPDKITFTTLMDGCCKDGDME 420
G PD ++YN LI G + ++ +A L+ +M GL PD T+ +++ G C+ M+
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
A + ++M+E G+ D +T
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYT 696
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 12/295 (4%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL------RYMMKVKPPGP 211
++ F ++S +T SG +D A+ V++ L IP +L + M+ V
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL-IPDNVIYTILIQGYCRKGMISV----- 428
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E+L+ G V +N ++HG CK + A +F+E+ +R L P + LI
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G+CK GN++ L M+ +RI DV T++ L++G K D A ++ +M + ++P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
++++ L++ C G + A + + M+ + I+P ++ N++I G C+ G+ + L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEV 446
+M + G PD I++ TL+ G ++ +M A + K+M EE L FT +
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 125 AHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLV 184
++S+L + KGH + + + + + +V++ + +I Y SG D + +
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL----EILECGYPPKVYLFNVLMHGFCK 240
+ +P N L Y V+ S F L E + G P V+ +N ++HGFC+
Sbjct: 612 ISEGF-VPDCISYNTLIYGF-VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
++ A +V ++ +R + P ++ +I+G+ N+ E FR+ M PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 153/281 (54%), Gaps = 1/281 (0%)
Query: 162 DVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFYLEIL 220
+V++ + G ++DA+ I+ + ++ P + N L+ + K + E +L
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ GY P VY +N ++ G CK+G+++ A V D++ R P V++NTLIS CK VE
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E L V+ S+ I PDV TF++LI GLC A LF+EM +G P+ T+ LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
D C GK+D AL + M G ++TYN LI+G CK +EA ++ +EM G+
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ +T+ TL+DG CK +E A ++ +M+ EG + D +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 145/284 (51%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V ++ +IS G + +AV+ + + ++ L+ + K + E
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P V FN L+ G C + R A +F+E+ + P ++N LI C G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++E + ME V T++ LI+G CK +++ EA +FDEM G+ N VT+
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TLIDG CK +V+ A + M+ +G +PD TYN+L+ C+ GD+K+A ++ M +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G +PD +T+ TL+ G CK G +E A ++ + + +GI L A+
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P F +M G+ + GD+ A + +++ + + VS N ++ G+CK G VE+
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 283 FRLKGVMESER-IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
M ++ FPD +TF+ L+NGLCK A + D M + G P+ T+ ++I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G CK G+V A++ M+ + P+ VTYN LI+ LCK ++EA +L + ++G+ P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
D TF +L+ G C + A+E+ + M +G E D + M
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 135/276 (48%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ + ++ LIS +++A + R++ K + + +L++ + + + E +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ G P + +N+L+ C G + A + ++ +V+++NTLI G+CK+
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
E + ME + + T++ LI+GLCK R ++A L D+M G P+ T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+L+ C+ G + A Q M G PD+VTY LI+GLCK G ++ A KLL +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+G+ + ++ G + A+ + + M+E+
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I E G P + +N +++ ++ + ++ ++P V +FN LI C++
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ + M S + PD TF+ ++ G +E D A + ++M G + V+
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++ G CK+G+V+ AL Q M +Q G PD T+N L+NGLCK G +K A ++++ M
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
G PD T+ +++ G CK G+++ A+E+ +M+
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I PDV TF+ LI LC+ + A + ++M GLVP+ TFTT++ G ++G +D AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFTTLMDG 412
+ + M++ G V+ N +++G CK G +++A + EM N G PD+ TF TL++G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 413 CCKDGDMESALEIKKRMVEEGIELDAVAF 441
CK G ++ A+EI M++EG + D +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 43/265 (16%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G V +N L+ GFCK R A +FDE+ + V++NTLI G CKS VE+
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L M E PD +T+++L+ C+ +A + M G P+ VT+ TLI G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 343 QCKDGKVDLALKKFQIMLDQGIR------------------------------------P 366
CK G+V++A K + + +GI P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 367 DLVTYNALINGLCKVGD-LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
D V+Y + GLC G ++EA L E+ +G P+ + L +G ME L
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLT-LSMEETLVK 703
Query: 426 KKRMVEEGIELDAVAFTMEEVAMQK 450
MV + F+ EEV+M K
Sbjct: 704 LVNMV-----MQKARFSEEEVSMVK 723
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPNG 333
+SG+ ++ ++ M+S R TF LI + DE + D M GL P+
Sbjct: 95 RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDT 154
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+ +++ + L M GI+PD+ T+N LI LC+ L+ A +L +
Sbjct: 155 HFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLED 214
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
M + GL PD+ TFTT+M G ++GD++ AL I+++MVE G
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+ ++ + +V ++ + I M++A + L++K + L ++ K
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
++ Y EIL P V +F L+ GFCK ++ +AR +F + K + P + +N
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI G+CKSGN+ E L MES + PDVFT++ LINGLC E + EAN LF +M
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ T+ +LI G CK+ ++ AL M G+ P+++T++ LI+G C V D+K A
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
L EM +G+ PD +T+T L+D K+ +M+ AL + M+E GI
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P +Y ++ ++ G+CK G++R A ++ EI +L P VV F TL+ G+CK+ +
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M + P+++ ++ LI+G CK EA L EM L P+ T+T LI+G
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C + +V A + FQ M ++ I P TYN+LI+G CK ++++A L +EM A G++P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
ITF+TL+DG C D+++A+ + M +GI D V +T
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 149/291 (51%), Gaps = 3/291 (1%)
Query: 144 LFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYM 203
LF + + S+ VF +LI + + G ++A + + R+ +AC ++L +
Sbjct: 118 LFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGL 174
Query: 204 MKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTV 263
++ + W Y ++ G P V+++ VL K G + DE+ ++P V
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNV 234
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+ I C+ +EE ++ +M+ + P+++T+SA+I+G CK +A L+ E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
+ L+PN V F TL+DG CK ++ A F M+ G+ P+L YN LI+G CK G+
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ EA LL+EM + L PD T+T L++G C + + A + ++M E I
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G P VY++ + + C+ + A +F+ + K + P + +++ +I GYCK+G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
NV + + L + + P+V F L++G CK A LF M + G+ PN +
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI G CK G + A+ M + PD+ TY LINGLC + EA +L +M
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ P T+ +L+ G CK+ +ME AL++ M G+E + + F+
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 114/218 (52%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P V+ + +L++G C + A +F ++ ++ P+ ++N+LI GYCK N+E+
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L M + + P++ TFS LI+G C A L+ EM +G+VP+ VT+T LID
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
K+ + AL+ + ML+ GI P+ T+ L++G K G L A E N + + +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
FT L++G C++G + A M GI D ++
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 147/295 (49%), Gaps = 1/295 (0%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL 199
+A SLF ++ ++ V++ LI + SG M +AV + + NL + L
Sbjct: 322 TARSLFVHMVK-FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 200 LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL 259
+ + + + ++ P +N L+HG+CK ++ A + E+ +
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
P +++F+TLI GYC +++ L M + I PDV T++ALI+ KE+ EA
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
L+ +M G+ PN TF L+DG K+G++ +A+ +Q Q + V + LI GLC
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ G + A + ++M + G+ PD ++ +++ G ++ + + ++ M++ GI
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G P + F+ L+ G+C V DI++A ++ E+ + + P VV++ LI + K
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
N++E RL M I P+ TF+ L++G KE R A + E ++ N V FT
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFT 553
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI+G C++G + A + F M GI PD+ +Y +++ G + + + L +M
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Query: 398 GLKPDKITFTTLMDGCCKDGDMESA 422
G+ P+ + L +G ++SA
Sbjct: 614 GILPNLLVNQLLARFYQANGYVKSA 638
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+F++L+ F ++G A V E+ K P + ++++G + + + +M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
S + PDV + L K+ + L DEM G+ PN +T I C+D K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ A K F++M G+ P+L TY+A+I+G CK G++++A L E+ L P+ + F TL
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIE 435
+DG CK ++ +A + MV+ G++
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVD 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
F+ LI + + G EE + M+ PD +++NGL + R D + M
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
RGLVP+ + L K G K M GI+P++ Y I LC+ ++
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
EA K+ M G+ P+ T++ ++DG CK G++ A + K ++ + + V F
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 165/328 (50%), Gaps = 41/328 (12%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQT--MPTQQSVLVFDVLISAYTDSGFM 174
+P L+ L S+ A L L+ MP +V+ ++ LI+ Y G +
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP---NVITYNALINGYCKRGMI 409
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
+DAV + L+ + L P +N L
Sbjct: 410 EDAVDVVELMESRKLS-----------------------------------PNTRTYNEL 434
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ G+CK ++ A V +++ +RK+ P VV++N+LI G C+SGN + +RL +M +
Sbjct: 435 IKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
PD +T++++I+ LCK R +EA LFD + ++G+ PN V +T LIDG CK GKVD A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
+ ML + P+ +T+NALI+GLC G LKEA L +M GL+P T T L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFT 442
KDGD + A ++M+ G + DA +T
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
++ +I+E G P + + L+ G+C+ D+ SA VF+E+P + R V++ LI G
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C + ++E L M+ + FP V T++ LI LC R EA +L EM G+ PN
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+T LID C K + A + ML++G+ P+++TYNALING CK G +++A ++
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M +R L P+ T+ L+ G CK ++ A+ + +M+E + D V +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYN 466
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 117/225 (52%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E E Y + +N L++ + G + + V+ E+ + K+ P + ++N +++GYCK G
Sbjct: 173 ERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
NVEE + + + PD FT+++LI G C+ D A +F+EM +G N V +T
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI G C ++D A+ F M D P + TY LI LC EA L+ EM
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G+KP+ T+T L+D C E A E+ +M+E+G+ + + +
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++ LI SG D A + + L+ + L +++ + K K + + +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ + G P V ++ L+ G+CK G + A L+ +++ + P ++FN LI G C G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++E L+ M + P V T + LI+ L K+ D A F +M G P+ T+T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T I C++G++ A M + G+ PDL TY++LI G +G A +L M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 398 GLKPDKITFTTLM 410
G +P + TF +L+
Sbjct: 702 GCEPSQHTFLSLI 714
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 223 GYPPKVYLFNVLMHGFC-KVGDIRSA-----RLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
GY V+ +LM C VGD ++ DE + K + + +NTL++ +
Sbjct: 137 GYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARF 196
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V+E ++ M +++ P+++T++ ++NG CK +EAN ++ GL P+ T+
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY 256
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+LI G C+ +D A K F M +G R + V Y LI+GLC + EA L +M
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
P T+T L+ C AL + K M E GI+ + +T+ ++ +C
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 28/313 (8%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF S L+ +V+++ LI Y +G +D+A + + KN +P N L
Sbjct: 516 ACDLFDS-LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC-LPNSLTFNAL 573
Query: 201 RYMM----KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
+ + K+K E ++++ G P V +L+H K GD A F ++
Sbjct: 574 IHGLCADGKLKEATLLEE---KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+P ++ T I YC+ G + + + M + PD+FT+S+LI G +++
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDG--QCKDGK----------------VDLALKKFQI 358
A + M G P+ TF +LI + K GK D ++ +
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN-ARGLKPDKITFTTLMDGCCKDG 417
M++ + P+ +Y LI G+C+VG+L+ A K+ + M G+ P ++ F L+ CCK
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 418 DMESALEIKKRMV 430
A ++ M+
Sbjct: 811 KHNEAAKVVDDMI 823
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 132/299 (44%), Gaps = 23/299 (7%)
Query: 117 ATRPPFREAHSLLCFLVS--RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFM 174
T+P +AH+ F+ + R+G + + ++ + + LI Y D G
Sbjct: 632 GTKP---DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
+ A ++ +R + +L+++++++K G P++ + +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK----------GSEPELCAMSNM 738
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME-SER 293
M + + + +++ + + P S+ LI G C+ GN+ ++ M+ +E
Sbjct: 739 M-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I P F+AL++ CK + +EA + D+M G +P + LI G K G+ +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
FQ +L G D + + +I+G+ K G ++ +L N M G K T++ L++G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 130/339 (38%), Gaps = 54/339 (15%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
L F+ LI G + +A + K LQ + L+ ++K ++ + +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+L G P + + + +C+ G + A + ++ + + P + ++++LI GY G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGL---------------CKESRS---DEANHL 320
F + M P TF +LI L C S D L
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALIN--- 376
++M + PN ++ LI G C+ G + +A K F M ++GI P + +NAL++
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 377 --------------------------------GLCKVGDLKEARKLLNEMNARGLKPDKI 404
GL K G+ + + + G D++
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ ++DG K G +E+ E+ M + G + + +++
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 131/221 (59%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
GY P V ++N ++ G CK + +A + + + K + P VV++N+LISG C SG +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
R+ M I+PDVFTF+ALI+ KE R EA ++EM RR L P+ VT++ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C ++D A + F M+ +G PD+VTY+ LING CK ++ KL EM+ RG+ +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+T+T L+ G C+ G + A EI +RMV G+ + + + +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 162/304 (53%), Gaps = 8/304 (2%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
M + +V++++ +I S +D+A+ + + K + + +L+ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL----CSSG 235
Query: 212 SWEFYLEILECGYP----PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
W ++ C P V+ FN L+ K G + A ++E+ +R L P +V+++
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
LI G C ++E + G M S+ FPDV T+S LING CK + + LF EM +R
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G+V N VT+T LI G C+ GK+++A + F+ M+ G+ P+++TYN L++GLC G +++A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVA 447
+L +M G+ D +T+ ++ G CK G++ A +I + +G+ D +T +
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 448 MQKE 451
+ K+
Sbjct: 476 LYKK 479
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 145/277 (52%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++ LIS SG DA + + + K+ + + L+ +K + EFY
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ P + +++L++G C + A +F + + P VV+++ LI+GYCKS
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
VE G +L M + + T++ LI G C+ + + A +F M G+ PN +T+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ G C +GK++ AL M G+ D+VTYN +I G+CK G++ +A + +N +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
GL PD T+TT+M G K G A + ++M E+GI
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+LR ++ S + + +++C P + F+ L+ K+ +++++
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
+ + + N L++ +C+ + G M P + TF +L+NG C+ R +A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
++FD+M G PN V + T+IDG CK +VD AL M GI PD+VTYN+LI+GL
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
C G +A ++++ M R + PD TF L+D C K+G + A E + M+ ++ D
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 439 VAFTM 443
V +++
Sbjct: 292 VTYSL 296
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
F K+ D S L F + R L P++ F+ L+S K + L M+ I +
Sbjct: 59 FMKLDD--SLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
+ T + L+N C+ S+ A +M + G P+ VTF +L++G C+ +V AL F
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M+ G +P++V YN +I+GLCK + A LLN M G+ PD +T+ +L+ G C G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 418 DMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
A + M + I D F A KE
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 91/175 (52%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + +LI+ Y S ++ ++ + ++ + L++ + + E +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ CG P + +NVL+HG C G I A ++ ++ K + +V++N +I G CK+G
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
V + + + + + + PD++T++ ++ GL K+ EA+ LF +M G++PN
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 82/163 (50%)
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
K K + + E+ + G + +L+ G+C+ G + A +F + + P ++
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++N L+ G C +G +E+ + M+ + D+ T++ +I G+CK +A ++ +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
+GL+P+ T+TT++ G K G A F+ M + GI P+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%)
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
G S R + + + ++ + + D++ LF M + +P+ F+ L+ K
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
K D+ + ++ M GI +L T N L+N C+ L A L +M G +P +TF
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+L++G C+ + AL + +MV G + + V +
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 161/305 (52%), Gaps = 1/305 (0%)
Query: 139 GSASSLFASFLQTMPTQQSV-LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
G +S +F + + T S V+D+LI Y G + D+++ RL+ + C
Sbjct: 143 GKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 202
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
+L ++K W F E+L+ P V FN+L++ C G + + ++ K
Sbjct: 203 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 262
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
PT+V++NT++ YCK G + L M+S+ + DV T++ LI+ LC+ +R +
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
L +M +R + PN VT+ TLI+G +GKV +A + ML G+ P+ VT+NALI+G
Sbjct: 323 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
G+ KEA K+ M A+GL P ++++ L+DG CK+ + + A RM G+ +
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 438 AVAFT 442
+ +T
Sbjct: 443 RITYT 447
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 150/287 (52%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ ++ Y G A++ + ++ K + + L+ + + +
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ + P +N L++GF G + A + +E+ L P V+FN LI G+
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GN +E ++ +ME++ + P ++ L++GLCK + D A + M R G+ +T+
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T +IDG CK+G +D A+ M GI PD+VTY+ALING CKVG K A++++ +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
GL P+ I ++TL+ CC+ G ++ A+ I + M+ EG D F +
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G P + ++ L++GFCKVG ++A+ + I + L P + ++TLI C+ G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++E R+ M E D FTF+ L+ LCK + EA M G++PN V+F
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI+G G+ A F M G P TY +L+ GLCK G L+EA K L ++A
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
D + + TL+ CK G++ A+ + MV+ I D+ +T
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ + +I +GF+D+AV + + K + + L+ KV + E
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I G P +++ L++ C++G ++ A +++ + +FN L++ CK+G
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V E M S+ I P+ +F LING +A +FDEM + G P T+ +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+ G CK G + A K + + D V YN L+ +CK G+L +A L EM R
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ PD T+T+L+ G C+ G A+ K G
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + VL+ G CK + AR + + + + +++ +I G CK+G ++E
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M + I PD+ T+SALING CK R A + + R GL PNG+ ++TLI
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+ G + A++ ++ M+ +G D T+N L+ LCK G + EA + + M + G+ P+
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
++F L++G G+ A + M + G
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 4/226 (1%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+L G P FN L+ G G+ + A +F + + L P+ VS+ L+ G CK+
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 278 --NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
++ GF ++ M+ + T++ +I+GLCK DEA L +EM + G+ P+ VT
Sbjct: 423 EFDLARGFYMR--MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++ LI+G CK G+ A + + G+ P+ + Y+ LI C++G LKEA ++ M
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G D TF L+ CK G + A E + M +GI + V+F
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 36/321 (11%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
F+VL+++ +G + +A + +R + + + + L+ ++ + E
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ + G+ P + + L+ G CK G +R A + V +NTL++ CKSGN
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG-LVPNGVTFT 337
+ + L G M I PD +T+++LI+GLC++ ++ A E RG ++PN V +T
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT--------------------------- 370
+DG K G+ + + M + G PD+VT
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 371 --------YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
YN L++G K D+ + L + G+ PDK+T +L+ G C+ +E
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 423 LEIKKRMVEEGIELDAVAFTM 443
L+I K + G+E+D F M
Sbjct: 849 LKILKAFICRGVEVDRYTFNM 869
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 3/314 (0%)
Query: 127 SLLCFLVSRKGHGSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLV 184
S C + G F+ F + + + + L+ G + +A + ++ +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+ LL M K + + E+++ P Y + L+ G C+ G
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Query: 245 RSARLVFDEIPKR-KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
A L E R + P V + + G K+G + G + M++ PD+ T +A
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
+I+G + + ++ N L EM + PN T+ L+ G K V + ++ ++ G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
I PD +T ++L+ G+C+ L+ K+L RG++ D+ TF L+ CC +G++ A
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 884
Query: 424 EIKKRMVEEGIELD 437
++ K M GI LD
Sbjct: 885 DLVKVMTSLGISLD 898
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 139/316 (43%), Gaps = 2/316 (0%)
Query: 130 CFL--VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
CF+ + + G A F + + ++ + +I Y+ G ++ + + +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 188 NLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSA 247
N L LL K K S+ Y I+ G P + L+ G C+ +
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 248 RLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALING 307
+ R + +FN LIS C +G + F L VM S I D T A+++
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 308 LCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
L + R E+ + EM ++G+ P + LI+G C+ G + A + M+ I P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
V +A++ L K G EA LL M L P +FTTLM CCK+G++ ALE++
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 428 RMVEEGIELDAVAFTM 443
M G++LD V++ +
Sbjct: 1029 VMSNCGLKLDLVSYNV 1044
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%)
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
+ +R+V E+ K+ + P + LI+G C+ G+++ F +K M + +I P SA+
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
+ L K ++DEA L M + LVP +FTTL+ CK+G V AL+ +M + G+
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ DLV+YN LI GLC GD+ A +L EM G + T+ L+ G
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 156/353 (44%), Gaps = 39/353 (11%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
P F SLL L + GH + F L +P ++++ L++A SG + AV
Sbjct: 615 HPTFFTYGSLLKGLC-KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG--YPPKVYLFNVLMH 236
+ ++++ +L+ + + + F E G P KV ++ +
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV-MYTCFVD 732
Query: 237 GFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFP 296
G K G ++ +++ P +V+ N +I GY + G +E+ L M ++ P
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
++ T++ L++G K + L+ + G++P+ +T +L+ G C+ +++ LK
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDL-------------------------------- 384
+ + +G+ D T+N LI+ C G++
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Query: 385 ---KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+E+R +L+EM+ +G+ P+ + L++G C+ GD+++A +K+ M+ I
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++LIS +G ++ A ++++ + + C+ ++ + + S E+
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ G P+ + L++G C+VGDI++A +V +E+ K+ P V+ + ++ K G +
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E L M ++ P + +F+ L++ CK EA L M GL + V++ LI
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING-LCKVGDLKEARKLLNEMNARGL 399
G C G + LA + ++ M G + TY ALI G L + A +L ++ ARG
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF-QI 358
+ LI +E ++ +F M G P+ T ++ K G+ D+++ F +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKE 223
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
ML + I PD+ T+N LIN LC G +++ L+ +M G P +T+ T++ CK G
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 419 MESALEIKKRMVEEGIELDAVAFTM 443
++A+E+ M +G++ D + M
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNM 308
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 164/324 (50%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
PP +++ V +S F + + + ++ F L++ Y ++DA+
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+ + + L+R + K + + E + ++ G P V +N L+ G C
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
++G A + ++ KR++ P V++F LI + K G + E L VM ++PDVF
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
T+ +LINGLC DEA +F M R G PN V +TTLI G CK +V+ +K F M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+G+ + +TY LI G C VG A+++ N+M++R PD T+ L+DG C +G +
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
E AL I + M + ++++ V +T+
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTI 438
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 167/318 (52%), Gaps = 1/318 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
+ +P +L+ L + A LF + T ++ +V+ ++ L++ + G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ-MGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
DA +R + K+ ++ + L+ +KV + E Y +++ P V+ + L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+G C G + AR +F + + P V + TLI G+CKS VE+G ++ M + +
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
+ T++ LI G C R D A +F++M R P+ T+ L+DG C +GKV+ AL
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F+ M + + ++VTY +I G+CK+G +++A L + ++G+KP+ IT+TT++ G C+
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 416 DGDMESALEIKKRMVEEG 433
G + A + K+M E+G
Sbjct: 481 RGLIHEADSLFKKMKEDG 498
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF + + P S++ F L+S D + ++ + L C ++
Sbjct: 67 ALDLFTRMVHSRPLP-SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ P + F ++++ G+ P + F L++G+C I A +FD+I +
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV++ TLI CK+ ++ L M + P+V T++AL+ GLC+ R +A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+M +R + PN +TFT LID K GK+ A + + +M+ + PD+ TY +LINGLC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G L EAR++ M G P+++ +TTL+ G CK +E ++I M ++G+ + +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 441 FTMEEVAMQKEC 452
+T V +Q C
Sbjct: 366 YT---VLIQGYC 374
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDD 176
+RP ++L+ L G A+ L ++ + +V+ F LI A+ G + +
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLME 276
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMH 236
A + ++ + ++ + +L+ + + + + + G P ++ L+H
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 237 GFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFP 296
GFCK + +F E+ ++ + +++ LI GYC G + + M S R P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D+ T++ L++GLC + ++A +F+ M +R + N VT+T +I G CK GKV+ A F
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
+ +G++P+++TY +I+G C+ G + EA L +M G P++ +
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L NGL + ++A LF M +P+ + FT L+ K + D+ + F+ M G
Sbjct: 55 LRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
I P L T N +++ +C A L +M G +PD +TFT+L++G C +E A+
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 424 EIKKRMVEEGIELDAVAFT 442
+ +++ G + + V +T
Sbjct: 174 ALFDQILGMGFKPNVVTYT 192
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 154/275 (56%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
VFD L S D G +++A+QC +++ + R+C LL K+ F+ ++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P V+ +N+++ CK GD+ +AR +F+E+ R L P V++N++I G+ K G +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++ M+ PDV T++ALIN CK + + EM GL PN V+++TL
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+D CK+G + A+K + M G+ P+ TY +LI+ CK+G+L +A +L NEM G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ + +T+T L+DG C M+ A E+ +M G+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 141/283 (49%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ ++ +I + G +DD V ++ + + L+ K EFY E
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ G P V ++ L+ FCK G ++ A + ++ + L P ++ +LI CK GN
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ + FRL M + +V T++ALI+GLC R EA LF +M G++PN ++
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G K +D AL+ + +GI+PDL+ Y I GLC + ++ A+ ++NEM G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+K + + +TTLMD K G+ L + M E IE+ V F
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 128/228 (56%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
F+ E+ + P V +N L++ FCK G + + E+ L+P VVS++TL+ +C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G +++ + M + P+ +T+++LI+ CK +A L +EM + G+ N V
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+T LIDG C ++ A + F M G+ P+L +YNALI+G K ++ A +LLNE+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
RG+KPD + + T + G C +E+A + M E GI+ +++ +T
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 1/287 (0%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW 213
+ +V+ + LI D+ M +A + + + L + L+ +K K +
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E E+ G P + L+ + G C + I +A++V +E+ + ++ + + TL+ Y
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPN 332
KSGN EG L M+ I V TF LI+GLCK +A F+ + GL N
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
FT +IDG CKD +V+ A F+ M+ +G+ PD Y +L++G K G++ EA L +
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
+M G+K D + +T+L+ G ++ A + M+ EGI D V
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 36/322 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + L+ A+ G M A++ +R+ L +L+ K+ ++
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+L+ G V + L+ G C ++ A +F ++ + P + S+N LI G+ K+
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLC--------------------------- 309
N++ L ++ I PD+ + I GLC
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 310 --------KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF-QIML 360
K E HL DEM + VTF LIDG CK+ V A+ F +I
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
D G++ + + A+I+GLCK ++ A L +M +GL PD+ +T+LMDG K G++
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
AL ++ +M E G++LD +A+T
Sbjct: 666 EALALRDKMAEIGMKLDLLAYT 687
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 117/217 (53%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P +F+ L +G + A F ++ + ++ P S N L+ + K G ++ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M P VFT++ +I+ +CKE + A LF+EM RGLVP+ VT+ ++IDG K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G++D + F+ M D PD++TYNALIN CK G L + EM GLKP+ ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++TL+D CK+G M+ A++ M G+ + +T
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 148/298 (49%), Gaps = 12/298 (4%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF + T ++ ++ LI + + MD A++ + ++ + ++ L +
Sbjct: 456 AEELFGK-MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ ++ + E+ ECG ++ LM + K G+ + DE+ + +
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD------VFTFSALINGLCKESRS 314
TVV+F LI G CK+ V K V RI D F+A+I+GLCK+++
Sbjct: 575 VTVVTFCVLIDGLCKNKLVS-----KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+ A LF++M ++GLVP+ +T+L+DG K G V AL M + G++ DL+ Y +L
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+ GL L++AR L EM G+ PD++ +++ + G ++ A+E++ +++
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P F+ L S G +EE + M+ R+FP + + L++ K ++D+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M G P T+ +ID CK+G V+ A F+ M +G+ PD VTYN++I+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
VG L + EM +PD IT+ L++ CK G + LE + M G++ + V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 441 FTMEEVAMQKE 451
++ A KE
Sbjct: 370 YSTLVDAFCKE 380
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 156/283 (55%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q + + + +++ SG A++ +R + ++N+++ ++ + K ++
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G + +N+L+ GFC G + ++ KRK+ P VV+F+ LI +
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + E L M I PD T+++LI+G CKE+ D+AN + D M +G PN
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
TF LI+G CK ++D L+ F+ M +G+ D VTYN LI G C++G L A++L EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+R + P+ +T+ L+DG C +G+ E ALEI +++ + +ELD
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 136/245 (55%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+L M K + E ++ E +++++ G CK G + +A +F+E+ +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
+ ++++N LI G+C +G ++G +L M +I P+V TFS LI+ KE + EA
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
L EM RG+ P+ +T+T+LIDG CK+ +D A + +M+ +G P++ T+N LING
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
CK + + +L +M+ RG+ D +T+ TL+ G C+ G + A E+ + MV + +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 439 VAFTM 443
V + +
Sbjct: 474 VTYKI 478
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 154/308 (50%), Gaps = 2/308 (0%)
Query: 138 HGSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA 195
HGS + F F ++ +++ +++LI + ++G DD + +R + K+ + +
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
L+ +K + E + E++ G P + L+ GFCK + A + D +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
+ P + +FN LI+GYCK+ +++G L M + D T++ LI G C+ + +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
A LF EM R + PN VT+ L+DG C +G+ + AL+ F+ + + D+ YN +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+G+C + +A L + +G+KP T+ ++ G CK G + A + ++M E+G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 436 LDAVAFTM 443
D + +
Sbjct: 576 PDGWTYNI 583
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 127/232 (54%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E ++E G+ P + N L++G C G A L+ D++ + +P V++ +++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
CKSG L ME I D +S +I+GLCK D A +LF+EM +G+
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N +T+ LI G C G+ D K + M+ + I P++VT++ LI+ K G L+EA +L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
EM RG+ PD IT+T+L+DG CK+ ++ A ++ MV +G + + F +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF + + P +V+ F L SA + D + + + K + L ++
Sbjct: 72 AIDLFRDMIHSRPLP-TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ + ++ +I++ GY P F+ L++G C G + A + D + + +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P +++ NTL++G C SG E L M P+ T+ ++N +CK ++ A L
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+M R + + V ++ +IDG CK G +D A F M +GI +++TYN LI G C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G + KLL +M R + P+ +TF+ L+D K+G + A E+ K M+ GI D +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 441 FT 442
+T
Sbjct: 371 YT 372
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 125/225 (55%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E G P + +++ CK G A + ++ +R ++ V ++ +I G CK G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+++ F L ME + I ++ T++ LI G C R D+ L +M +R + PN VTF+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LID K+GK+ A + + M+ +GI PD +TY +LI+G CK L +A ++++ M ++
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ TF L++G CK ++ LE+ ++M G+ D V +
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++++ FC+ + A +I K P ++F+TLI+G C G V E
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD+ T + L+NGLC + EA L D+M G PN VT+ +++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G+ LA++ + M ++ I+ D V Y+ +I+GLCK G L A L NEM +G+ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
IT+ L+ G C G + ++ + M++ I + V F++
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 249 LVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGL 308
L D I R L PTV+ F+ L S K+ + L ME + I +++T S +IN
Sbjct: 75 LFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
C+ + A ++ + G PN +TF+TLI+G C +G+V AL+ M++ G +PDL
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
+T N L+NGLC G EA L+++M G +P+ +T+ +++ CK G A+E+ ++
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 429 MVEEGIELDAVAFTM 443
M E I+LDAV +++
Sbjct: 254 MEERNIKLDAVKYSI 268
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ + LI + +D A Q + L+ K +R L+ K E + +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ G +N L+ GFC++G + A+ +F E+ RK+ P +V++ L+ G C +G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E+ + +E ++ D+ ++ +I+G+C S+ D+A LF + +G+ P T+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G CK G + A F+ M + G PD TYN LI GD ++ KL+ E+ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 399 LKPDKITFTTLMD 411
D T ++D
Sbjct: 609 FSVDASTIKMVID 621
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V F+ L K + ++ + + + + + +I+ +C+ + F
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G + P+ TFS LINGLC E R EA L D M G P+ +T TL++G C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
GK A+ M++ G +P+ VTY ++N +CK G A +LL +M R +K D +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++ ++DG CK G +++A + M +GI + + + +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
++ H ++ + + ++ F++LI+ Y + +DD ++ R + + +
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
L++ ++ + E + E++ PP + + +L+ G C G+ A +F++I
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
K K+ + +N +I G C + V++ + L + + + P V T++ +I GLCK+
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
EA LF +M G P+G T+ LI DG ++K + + G D T +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 375 INGLCKVGDLKEA 387
I+ L G LK++
Sbjct: 620 IDMLSD-GRLKKS 631
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
++D+A LF +M +P + F+ L K + DL L + M +GI +L T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+IN C+ L A + ++ G +P+ ITF+TL++G C +G + ALE+ RMVE
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 433 GIELDAVAFT 442
G + D +
Sbjct: 188 GHKPDLITIN 197
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 162/292 (55%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
M + +++ + L++ +G + DAV I + + Q +L M K
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E ++ E +++++ G CK G + +A +F+E+ + + ++++NTLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G+C +G ++G +L M +I P+V TFS LI+ KE + EA+ L EM +RG+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N +T+ +LIDG CK+ +++ A++ +M+ +G PD++T+N LING CK + + +L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
EM+ RG+ + +T+ TL+ G C+ G +E A ++ + MV + D V++ +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 162/307 (52%), Gaps = 37/307 (12%)
Query: 139 GSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
GS + F F ++ + ++ ++ LI + ++G DD +
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK----------------- 319
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
LLR M+K K P V F+VL+ F K G +R A + E+ +
Sbjct: 320 --LLRDMIKRK----------------ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
R + P +++N+LI G+CK +EE ++ +M S+ PD+ TF+ LING CK +R D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
LF EM RG++ N VT+ TL+ G C+ GK+++A K FQ M+ + +RPD+V+Y L++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
GLC G+L++A ++ ++ ++ D + ++ G C ++ A ++ + +G++L
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 437 DAVAFTM 443
DA A+ +
Sbjct: 542 DARAYNI 548
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 130/232 (56%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E ++E G+ P + N L++G C G + A ++ D + + +P V++ +++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
CKSG L ME I D +S +I+GLCK+ D A +LF+EM +G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ +T+ TLI G C G+ D K + M+ + I P++VT++ LI+ K G L+EA +LL
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
EM RG+ P+ IT+ +L+DG CK+ +E A+++ M+ +G + D + F +
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 151/302 (50%), Gaps = 1/302 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF +Q+ P +V+ F+ L SA + + + + + K + + ++
Sbjct: 72 AVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ + ++ +I++ GY P +FN L++G C + A + D + + +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
PT+++ NTL++G C +G V + L M P+ T+ ++N +CK ++ A L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+M R + + V ++ +IDG CKDG +D A F M +G + D++TYN LI G C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G + KLL +M R + P+ +TF+ L+D K+G + A ++ K M++ GI + +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 441 FT 442
+
Sbjct: 371 YN 372
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++++ FC+ + A +I K P V FNTL++G C V E
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M P + T + L+NGLC + +A L D M G PN VT+ +++
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G+ LA++ + M ++ I+ D V Y+ +I+GLCK G L A L NEM +G K D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
IT+ TL+ G C G + ++ + M++ I + V F++
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L G + + L D I R L PTV+ FN L S K+ E L MES+
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I ++T S +IN C+ + A ++ + G P+ V F TL++G C + +V AL
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ M++ G +P L+T N L+NGLC G + +A L++ M G +P+++T+ +++
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFTM 443
CK G A+E+ ++M E I+LDAV +++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 101/221 (45%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ F++LI+ Y + +DD ++ R + + + L++ + + + +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ P + + +L+ G C G++ A +F +I K K+ + + +I G C +
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V++ + L + + + D ++ +I+ LC++ +A+ LF +M G P+ +T+
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
LI D A + + M G D+ T +IN L
Sbjct: 583 ILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 158/286 (55%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
VL+++ +I MDDA+ + + K ++ + +L+ + +
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++E P V+ F+ L+ F K G + A ++DE+ KR + P++V++++LI+G+C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++E ++ M S+ FPDV T++ LI G CK R +E +F EM +RGLV N VT+
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI G + G D+A + F+ M+ G+ P+++TYN L++GLCK G L++A + +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++P T+ +++G CK G +E ++ + +G++ D VA+
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 126/209 (60%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V ++N ++ G CK + A +F E+ + +RP VV++++LIS C G + RL
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M +I PDVFTFSALI+ KE + EA L+DEM +R + P+ VT+++LI+G C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
++D A + F+ M+ + PD+VTYN LI G CK ++E ++ EM+ RGL + +T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ L+ G + GD + A EI K MV +G+
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 129/221 (58%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + + V+++G CK GD A + +++ + KL P V+ +NT+I G CK ++++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L ME++ I P+V T+S+LI+ LC R +A+ L +M R + P+ TF+ LID
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K+GK+ A K + M+ + I P +VTY++LING C L EA+++ M ++ PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+T+ TL+ G CK +E +E+ + M + G+ + V + +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P + + L++G+C I A + D++ +P V+FNTLI G
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E L M ++ PD+ T+ ++NGLCK +D A +L ++M + L P + +
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+IDG CK +D AL F+ M +GIRP++VTY++LI+ LC G +A +LL++M R
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ PD TF+ L+D K+G + A ++ MV+ I+ V ++
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 123/225 (54%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ GY P FN L+HG A + D + + +P +V++ +++G CK G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + F L ME ++ P V ++ +I+GLCK D+A +LF EM +G+ PN VT++
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+LI C G+ A + M+++ I PD+ T++ALI+ K G L EA KL +EM R
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ P +T+++L++G C ++ A ++ + MV + D V +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 117/229 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P Y +++L++ FC+ + A V ++ K P +V+ ++L++GYC S + E
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M P+ TF+ LI+GL +++ EA L D M +G P+ VT+ +++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G DLA M + P ++ YN +I+GLCK + +A L EM +G++P+
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+T+++L+ C G A + M+E I D F+ A KE
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S++ + LI+ + +D+A Q + K+ + L++ K K E +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ + G +N+L+ G + GD A+ +F E+ + P ++++NTL+ G CK+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E+ + ++ ++ P ++T++ +I G+CK + ++ LF + +G+ P+ V +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I G C+ G + A F+ M + G P+ YN LI + GD + + +L+ EM +
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESAL 423
G D T L+ DG ++ +
Sbjct: 600 CGFAGDASTI-GLVTNMLHDGRLDKSF 625
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 211 PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
PS+ F+ G Y + +G ++ + A +F E+ K + P+++ F+ L+
Sbjct: 30 PSFSFFWRRAFSGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLL 88
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
S K + L M++ I + +T+S LIN C+ S+ A + +M + G
Sbjct: 89 SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 148
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
PN VT ++L++G C ++ A+ M G +P+ VT+N LI+GL EA L
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
++ M A+G +PD +T+ +++G CK GD + A + +M + +E
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L G M R FP + FS L++ + K ++ D L ++M G+ N T++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI+ C+ ++ LAL M+ G P++VT ++L+NG C + EA L+++M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+P+ +TF TL+ G A+ + RMV +G + D V +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
NGL E + D+A LF EM + P+ + F+ L+ K K D+ + + M + GI
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ TY+ LIN C+ L A +L +M G +P+ +T ++L++G C + A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 426 KKRMVEEGIELDAVAFT 442
+M G + + V F
Sbjct: 174 VDQMFVTGYQPNTVTFN 190
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 155/279 (55%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ + ++ LIS ++SG DA + +R + K+ + + L+ +K +
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y E++ P V+ +N L++GFC G + A+ +FD + + P VV++NTLI+G+C
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
KS VE+G +L M + + D FT++ LI+G C+ + + A +F+ M G+ P+ V
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ L+D C +GK++ AL + + + D++TYN +I GLC+ LKEA L +
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+G+KPD I + T++ G C+ G A ++ +RM E+G
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 128/221 (57%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P V ++N +++G CK D+ +A VF + K+ +R V++NTLISG SG +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
RL M +I P+V F+ALI+ KE EA +L+ EM RR +VPN T+ +LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C G + A F +M+ +G PD+VTYN LI G CK +++ KL EM +GL D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
T+ TL+ G C+ G + A ++ RMV+ G+ D V + +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 170/326 (52%), Gaps = 1/326 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
L RP SLL A SL S + +V++++ +I+ + ++
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS-MDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+A++ + KK ++ L+ + + ++++ P V F L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
F K G++ AR ++ E+ +R + P V ++N+LI+G+C G + + + +M S+ F
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PDV T++ LI G CK R ++ LF EM +GLV + T+ TLI G C+ GK+++A K
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F M+D G+ PD+VTYN L++ LC G +++A ++ ++ + D IT+ ++ G C+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 416 DGDMESALEIKKRMVEEGIELDAVAF 441
++ A + + + +G++ DA+A+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 4/231 (1%)
Query: 217 LEILEC----GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
LE+ C G +N L+ G G A + ++ KRK+ P V+ F LI
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
+ K GN+ E L M + P+VFT+++LING C +A ++FD M +G P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
VT+ TLI G CK +V+ +K F M QG+ D TYN LI+G C+ G L A+K+ N
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M G+ PD +T+ L+D C +G +E AL + + + + +++D + + +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 123/225 (54%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ G+ P + L++GFC+ + A + D + P VV +NT+I+G CK+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + ME + I D T++ LI+GL R +A L +M +R + PN + FT
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LID K+G + A ++ M+ + + P++ TYN+LING C G L +A+ + + M ++
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G PD +T+ TL+ G CK +E +++ M +G+ DA +
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V ++ LI+ + G + DA L+ K + L+ K K + +
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ G + +N L+HG+C+ G + A+ VF+ + + P +V++N L+ C +
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E+ + ++ + D+ T++ +I GLC+ + EA LF + R+G+ P+ + +
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
T+I G C+ G A K + M + G P Y+
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F E+ + + P++V F +++ K + L ME+ I D+++F+ LI+ C
Sbjct: 66 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC 125
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ SR A L +M + G P+ VT +L++G C+ + A+ M G P++V
Sbjct: 126 RCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVV 185
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
YN +INGLCK DL A ++ M +G++ D +T+ TL+ G G A + + M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 430 VEEGIELDAVAFT 442
V+ I+ + + FT
Sbjct: 246 VKRKIDPNVIFFT 258
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%)
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++ F L M R P + F+ ++ + K ++ D +L+ +M G+ + +FT L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I C+ ++ LAL M+ G RP +VT +L+NG C+ +EA L++ M+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P+ + + T+++G CK+ D+ +ALE+ M ++GI DAV +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 173/339 (51%), Gaps = 32/339 (9%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
+++ ++ ++G + F ++ + +++ ++ L+ ++ G ++ A I ++
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 187 KNLQIPLRACENLLRYM---------------MKVKPPGPSWEFYL-------------- 217
K Q ++ +L +M + + P S+ +
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 218 ---EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
E+++ G P Y +N L+HG I +A ++ EI ++ + V++N LI+GYC
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ G+ ++ F L M ++ I P FT+++LI LC+++++ EA+ LF+++ +G+ P+ V
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
TL+DG C G +D A + M I PD VTYN L+ GLC G +EAR+L+ EM
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
RG+KPD I++ TL+ G K GD + A ++ M+ G
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 154/287 (53%), Gaps = 3/287 (1%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
+S ++FD+L+ +D+A++C L+++K C ++L + ++ +W F
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y ++ VY FN++++ CK G ++ A+ + ++PT+V++NTL+ G+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G +E + M+S+ PD+ T++ +++ +C E R+ E + EM GLVP+ V+
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVS 329
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ LI G +G +++A M+ QG+ P TYN LI+GL ++ A L+ E+
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+G+ D +T+ L++G C+ GD + A + M+ +GI+ +T
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 4/244 (1%)
Query: 173 FMDDAVQC----IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKV 228
FM++ ++ IR +R+K + + L+ + ++ + E++ G P
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+ + L++ C+ R A +F+++ + ++P +V NTL+ G+C GN++ F L
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M+ I PD T++ L+ GLC E + +EA L EM RRG+ P+ +++ TLI G K G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
A ML G P L+TYNAL+ GL K + + A +LL EM + G+ P+ +F +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 409 LMDG 412
+++
Sbjct: 613 VIEA 616
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 6/201 (2%)
Query: 246 SARLVFDEI---PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
S R +FDE+ R + + F+ L+ C+ V+E +M+ + +P T +
Sbjct: 135 SIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCN 194
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
++ L + +R + A + +M R + N TF +I+ CK+GK+ A IM
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
GI+P +VTYN L+ G G ++ AR +++EM ++G +PD T+ ++ C +G A
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RA 311
Query: 423 LEIKKRMVEEGIELDAVAFTM 443
E+ + M E G+ D+V++ +
Sbjct: 312 SEVLREMKEIGLVPDSVSYNI 332
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ +++LI+ Y G A + +Q +L+ + + + E + +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++ G P + + N LM G C +G++ A + E+ + P V++N L+ G C G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
EE L G M+ I PD +++ LI+G K+ + A + DEM G P +T+
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
L+ G K+ + +LA + + M +GI P+ ++ ++I + +
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 144/239 (60%)
Query: 204 MKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTV 263
+K+ G E + + P V+++NVL+ G CK + A +FDE+ R+L P++
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+++NTLI GYCK+GN E+ F+++ M+++ I P + TF+ L+ GL K ++A ++ E
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
M G VP+ TF+ L DG + K + AL ++ +D G++ + T + L+N LCK G
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+++A ++L A+GL P+++ + T++DG C+ GD+ A + M ++G++ D +A+
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 121/229 (52%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P +L+ K R VF I + RP+ + I K +V +G
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M+ +RI+P VF ++ LI+GLCK R ++A LFDEM R L+P+ +T+ TLIDG
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G + + K + M I P L+T+N L+ GL K G +++A +L EM G PD
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
TF+ L DG + E+AL + + V+ G++++A ++ A+ KE
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 35/313 (11%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
F +L Y+ + + A+ +++ C LL + K + E
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P ++N ++ G+C+ GD+ AR+ + + K+ ++P +++N LI +C+ G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 278 NVEEG------FRLKGV-----------------------------MESERIFPDVFTFS 302
+E +LKGV ME P+V ++
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
LIN LCK S+ EA + +M RG+ P + LIDG C GK++ A + + ML +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
GI +LVTYN LI+GL G L EA LL E++ +GLKPD T+ +L+ G G+++
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 423 LEIKKRMVEEGIE 435
+ + + M GI+
Sbjct: 619 IALYEEMKRSGIK 631
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S++ F+ L+ +G ++DA ++ ++ L + + Y
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G Y ++L++ CK G I A + + L P V +NT+I GYC+
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 277 GNVEEGFRLK-GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G++ G R+K ME + + PD ++ LI C+ + A ++M +G+ P+ T
Sbjct: 403 GDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ LI G + + D + M D G P++V+Y LIN LCK L EA+ + +M
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
RG+ P + L+DGCC G +E A K M+++GIEL+ V +
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 143/315 (45%), Gaps = 31/315 (9%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
++++ +I Y G + A I + K+ ++ A L+R ++ + + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ G P V +N+L+ G+ + + + E+ P VVS+ TLI+ CK
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ E +K ME + P V ++ LI+G C + + ++A EM ++G+ N VT+ T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LIDG GK+ A + +G++PD+ TYN+LI+G G+++ L EM G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 399 LKPDKITFTTLMDGCCKD-------------------------------GDMESALEIKK 427
+KP T+ L+ C K+ GDME A ++K
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 428 RMVEEGIELDAVAFT 442
+M+E+ I LD +
Sbjct: 690 QMIEKSIGLDKTTYN 704
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
++ F E+L+ G + +N L+ G G + A + EI ++ L+P V ++N+LIS
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GY +GNV+ L M+ I P + T+ LI+ LC + + LF EM L P
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKP 663
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + + ++ G ++ A + M+++ I D TYN+LI G KVG L E R L+
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+EMNAR ++P+ T+ ++ G C+ D SA + M E+G LD
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V ++++LI G ++DA + + + KK +++ L L+ + + + L
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS------ 271
EI G P V+ +N L+ G+ G+++ +++E+ + ++PT+ +++ LIS
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 272 -------------------------GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
Y G++E+ F L+ M + I D T+++LI
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 307 GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
G K + E L DEM R + P T+ ++ G C+ A ++ M ++G
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
D+ N L++GL + KEA +++EMN R L
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKV-GDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
+++FY + E G PP V NVL+ C+ G + + +F E+PKR P ++ TLI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
SG C+ G ++E +L M + P V T+++LINGLC DEA +EM +G+
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
PN T+++L+DG CKDG+ A++ F++M+ +G RP++VTY LI GLCK ++EA +L
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
L+ MN +GLKPD + ++ G C A M+ GI
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ +LE+ + G P Y + L+ G C+ G I A+ +F E+ ++ PTVV++ +LI+G
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C S NV+E R M+S+ I P+VFT+S+L++GLCK+ RS +A LF+ M RG PN
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+TTLI G CK+ K+ A++ M QG++PD Y +I+G C + +EA L+E
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 394 MNARGLKPDKITF 406
M G+ P+++T+
Sbjct: 358 MILGGITPNRLTW 370
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
Query: 259 LRPTVVSFNTLISGYCKS-GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
L PTV S N LI C++ G V+ G ++ M PD +T+ LI+GLC+ R DEA
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
LF EM + P VT+T+LI+G C VD A++ + M +GI P++ TY++L++G
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG 271
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
LCK G +A +L M ARG +P+ +T+TTL+ G CK+ ++ A+E+ RM +G++ D
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 438 A 438
A
Sbjct: 332 A 332
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%), Gaps = 18/298 (6%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
++S+ VFD + Y + G++ D +V + +A E+L+ MK++ S +
Sbjct: 30 EKSMAVFDSATAEYAN-GYVHDQSSFGYMVLRLVSANKFKAAEDLI-VRMKIENCVVSED 87
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
L I G+ +V + VF ++ P+ ++ T+++
Sbjct: 88 ILLSIC---------------RGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV 132
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN-HLFDEMCRRGLVPNG 333
+ + F+ M + P V + + LI LC+ + +A +F EM +RG P+
Sbjct: 133 EENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ TLI G C+ G++D A K F M+++ P +VTY +LINGLC ++ EA + L E
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
M ++G++P+ T+++LMDG CKDG A+E+ + M+ G + V +T + KE
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 8/257 (3%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ LIS G +D+A + + +K+ + +L+ + K + + E+
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P V+ ++ LM G CK G A +F+ + R RP +V++ TLI+G CK ++
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT-- 338
E L M + + PD + +I+G C S+ EA + DEM G+ PN +T+
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 339 -----LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
++ G C + A + M +GI ++ T +L+ LCK G+ ++A +L++E
Sbjct: 375 KTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Query: 394 MNARGLKPDKITFTTLM 410
+ G P K T+ L+
Sbjct: 434 IVTDGCIPSKGTWKLLI 450
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 157/285 (55%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ + +L+ +G M DA + +R++ ++ + +L+ + + ++ + E
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ E G P Y + L+ G CKVG++ +A ++ +E+ + + T V FNTLI GYC+ G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V+E + VME + DVFT + + + + R DEA M G+ + V++T
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LID CK+G V+ A + F M +G++P+ +TYN +I CK G +KEARKL M A G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ PD T+T+L+ G C +++ A+ + M +G++ ++V +T+
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 162 DVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE 221
D++ Y D+G ++ ++ + KK L I R+C L K + E + +++
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 222 CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE 281
G VY +++ G C+ G++ ++ + E + ++P ++NT+I+ Y K +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+ VM+ + + + T++ L+ K + +A LFDEM RG+ + +T+LI
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
C+ G + A F + ++G+ P TY ALI+G+CKVG++ A L+NEM ++G+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVA 447
++ F TL+DG C+ G ++ A I M ++G + D FT +A
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD--VFTCNTIA 441
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%)
Query: 133 VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP 192
V + G A+ + + +Q+ + +VF+ LI Y G +D+A ++ +K Q
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+ C + ++K + ++ ++E G + L+ +CK G++ A+ +F
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
E+ + ++P +++N +I YCK G ++E +L+ ME+ + PD +T+++LI+G C
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
DEA LF EM +GL N VT+T +I G K GK D A + M +G D Y
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 373 ALINGL 378
ALI +
Sbjct: 614 ALIGSM 619
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 152/289 (52%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q + + +++ G +D A+ ++ + K ++ + ++ + K +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V +N L+ C G A + ++ +RK+ P VV+F+ LI +
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + E +L M I PD+FT+S+LING C R DEA H+F+ M + PN V
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI G CK +V+ ++ F+ M +G+ + VTYN LI GL + GD A+K+ +M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ G+ PD IT++ L+DG CK G +E AL + + + + +E D + +
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 159/288 (55%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ V+++ +I A + ++DA+ + K ++ + +L+R + +
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+++E P V F+ L+ F K G + A ++DE+ KR + P + ++++LI+G+C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++E + +M S+ FP+V T++ LI G CK R +E LF EM +RGLV N V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI G + G D+A K F+ M+ G+ PD++TY+ L++GLCK G L++A + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++PD T+ +++G CK G +E ++ + +G++ + + +T
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 160/302 (52%), Gaps = 1/302 (0%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
L + K A +LF + + +V+ ++ LI + G DA + + + ++ +
Sbjct: 265 LCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
+ L+ +K + + Y E+++ P ++ ++ L++GFC + A+ +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
+ + + P VV++NTLI G+CK+ VEEG L M + + T++ LI GL +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
D A +F +M G+ P+ +T++ L+DG CK GK++ AL F+ + + PD+ TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
N +I G+CK G +++ L ++ +G+KP+ I +TT++ G C+ G E A + + M E
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 432 EG 433
+G
Sbjct: 564 DG 565
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 122/220 (55%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P ++ + +++G CK GDI A + ++ K K+ VV + T+I C NV +
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M+++ I P+V T+++LI LC R +A+ L +M R + PN VTF+ LID
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K+GK+ A K + M+ + I PD+ TY++LING C L EA+ + M ++ P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+T+ TL+ G CK +E +E+ + M + G+ + V +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 1/302 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF +Q+ P S++ F+ L+SA D + ++ + L + L+
Sbjct: 64 AVDLFGEMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ + ++++ GY P + + L++G+C I A + D++ + +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P V+FNTLI G E L M + PD+FT+ ++NGLCK D A L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+M + + + V +TT+ID C V+ AL F M ++GIRP++VTYN+LI LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G +A +LL++M R + P+ +TF+ L+D K+G + A ++ M++ I+ D
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 441 FT 442
++
Sbjct: 363 YS 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 165/328 (50%), Gaps = 3/328 (0%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDD 176
RP +SL+ L + AS L + ++ +V+ F LI A+ G + +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVE 343
Query: 177 AVQCIRLVRKKNLQIPLRACENLLR-YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + + K+++ + +L+ + M + F L I + +P V +N L+
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLI 402
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
GFCK + +F E+ +R L V++NTLI G ++G+ + ++ M S+ +
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PD+ T+S L++GLCK + ++A +F+ + + + P+ T+ +I+G CK GKV+
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F + +G++P+++ Y +I+G C+ G +EA L EM G P+ T+ TL+ +
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
DGD ++ E+ K M G DA +M
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISM 610
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
Y P FN L+HG A + D + R +P + ++ T+++G CK G+++
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L ME +I DV ++ +I+ LC ++A +LF EM +G+ PN VT+ +LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
C G+ A + M+++ I P++VT++ALI+ K G L EA KL +EM R + PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
T+++L++G C M L+ K M E I D
Sbjct: 361 FTYSSLINGFC----MHDRLDEAKHMFELMISKD 390
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
+Y +N+L++ FC+ + A V ++ K P +V+ ++L++GYC + E L
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M P+ TF+ LI+GL +++ EA L D M RG P+ T+ T+++G CK G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+DLAL + M I D+V Y +I+ LC ++ +A L EM+ +G++P+ +T+
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+L+ C G A + M+E I + V F+ A KE
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ + LI+ + +D+A L+ K+ + L++ K K E +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G +N L+ G + GD A+ +F ++ + P +++++ L+ G CK G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E+ + ++ ++ PD++T++ +I G+CK + ++ LF + +G+ PN + +T
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+I G C+ G + A F+ M + G P+ TYN LI + GD + +L+ EM +
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 398 GLKPDKITFTTLMDGCCKDGDMESA 422
G D T + +++ DG +E +
Sbjct: 600 GFVGDASTISMVIN-MLHDGRLEKS 623
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L G M R P + F+ L++ + K ++ D L + M + + ++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE----- 393
LI+ C+ ++ LAL M+ G PD+VT ++L+NG C + EA L+++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 394 ------------------------------MNARGLKPDKITFTTLMDGCCKDGDMESAL 423
M ARG +PD T+ T+++G CK GD++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 424 EIKKRMVEEGIELDAVAFT 442
+ K+M + IE D V +T
Sbjct: 241 SLLKKMEKGKIEADVVIYT 259
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 155/279 (55%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG 223
L++ + + DAV + + + + + A ++ + K K +++F+ EI G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P V + L++G C A + ++ K+K+ P V++++ L+ + K+G V E
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L M I PD+ T+S+LINGLC R DEAN +FD M +G + + V++ TLI+G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
CK +V+ +K F+ M +G+ + VTYN LI G + GD+ +A++ ++M+ G+ PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ L+ G C +G++E AL I + M + ++LD V +T
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 155/285 (54%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ ++ +I + + ++DA + + +K ++ + L+ + +
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ P V ++ L+ F K G + A+ +F+E+ + + P +V++++LI+G C
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++E ++ +M S+ DV +++ LING CK R ++ LF EM +RGLV N VT+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TLI G + G VD A + F M GI PD+ TYN L+ GLC G+L++A + +M R
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ D +T+TT++ G CK G +E A + + +G++ D V +T
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 132/224 (58%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++L+ GY P L++GFC+ + A + D++ + +P +V++N +I CK+
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V + F +E + I P+V T++AL+NGLC SR +A L +M ++ + PN +T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+D K+GKV A + F+ M+ I PD+VTY++LINGLC + EA ++ + M ++
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G D +++ TL++G CK +E +++ + M + G+ + V +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 151/295 (51%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + L++ +S DA + + + KK + + LL +K + E +
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++ P + ++ L++G C I A +FD + + VVS+NTLI+G+CK+
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
VE+G +L M + + T++ LI G + D+A F +M G+ P+ T+
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+ G C +G+++ AL F+ M + + D+VTY +I G+CK G ++EA L ++
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+GLKPD +T+TT+M G C G + + +M +EG+ + + ++ + E
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAE 518
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 124/225 (55%), Gaps = 2/225 (0%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+E+L G +Y FN++++ FC + A + ++ K P V+ +L++G+C+
Sbjct: 111 MEVL--GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
V + L M PD+ ++A+I+ LCK R ++A F E+ R+G+ PN VT+
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T L++G C + A + M+ + I P+++TY+AL++ K G + EA++L EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ PD +T+++L++G C ++ A ++ MV +G D V++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + FN L+ K+ + ++ +R + +FN +I+ +C V +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G M PD T +L+NG C+ +R +A L D+M G P+ V + +ID CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+V+ A F+ + +GIRP++VTY AL+NGLC +A +LL++M + + P+ IT
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ L+D K+G + A E+ + MV I+ D V ++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 102/193 (52%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F ++ K + P++V FN L+S K + L ME I D++TF+ +IN C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ A + +M + G P+ VT +L++G C+ +V A+ M++ G +PD+V
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
YNA+I+ LCK + +A E+ +G++P+ +T+T L++G C A + M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 430 VEEGIELDAVAFT 442
+++ I + + ++
Sbjct: 252 IKKKITPNVITYS 264
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF ++ M ++ + LI+ +D+A Q L+ K + + L+
Sbjct: 279 AKELFEEMVR-MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K K + + E+ + G +N L+ GF + GD+ A+ F ++ +
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P + ++N L+ G C +G +E+ + M+ + D+ T++ +I G+CK + +EA L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F + +GL P+ VT+TT++ G C G + + M +G+ + T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD------- 510
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
GD+ + +L+ +M + G P + G CK
Sbjct: 511 -GDITLSAELIKKMLSCGYAPS--LLKDIKSGVCK 542
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%)
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
++ + ++A LF +M + P+ V F L+ K K D+ + + M GIR DL
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+N +IN C + A +L +M G +PD++T +L++G C+ + A+ + +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 430 VEEGIELDAVAF 441
VE G + D VA+
Sbjct: 182 VEIGYKPDIVAY 193
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 136/230 (59%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ F E+++ G VY +N L++G CK GDI +A E+ +KL PTVV++ +L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GYC G + + RL M + I P ++TF+ L++GL + +A LF+EM + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N VT+ +I+G C++G + A + + M ++GI PD +Y LI+GLC G EA+ +
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ ++ + ++I +T L+ G C++G +E AL + + MV+ G++LD V +
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 160/322 (49%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P +S+L + R+G + F + + SV ++ LI+ + G + A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 181 IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+ + K L+ + +L+ + Y E+ G P +Y F L+ G +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFT 300
G IR A +F+E+ + ++P V++N +I GYC+ G++ + F M + I PD ++
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+ LI+GLC ++ EA D + + N + +T L+ G C++GK++ AL Q M+
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
+G+ DLV Y LI+G K D K LL EM+ RGLKPD + +T+++D K GD +
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
A I M+ EG + V +T
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYT 721
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 126/223 (56%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G P ++++N L+ CK A L+FD + K LRP V+++ LI +C+ G
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++ G M + V+ +++LING CK A EM + L P VT+T+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+ G C GK++ AL+ + M +GI P + T+ L++GL + G +++A KL NEM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+KP+++T+ +++G C++GDM A E K M E+GI D ++
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 159/353 (45%), Gaps = 71/353 (20%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFYLEI 219
FD+LI Y S + D V +++ K +P +R LL ++K + G + E + ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 220 LECGYPPKVYLF-----------------------------------NVLMHGFCKVGDI 244
+ G P VY++ NVL+ G CK +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE------------------------ 280
A + ++ + L+P VV++ TL+ G CK E
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 281 -EGFRLKGVMESE----------RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
EG R +G +E + P++F ++ALI+ LCK + EA LFD M + GL
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
PN VT++ LID C+ GK+D AL M+D G++ + YN+LING CK GD+ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ EM + L+P +T+T+LM G C G + AL + M +GI FT
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 150/299 (50%), Gaps = 2/299 (0%)
Query: 137 GHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
G S + +F L + + + + L+ + G +++A+ + + ++ + + L
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
L+ +K K + E+ + G P ++ ++ K GD + A ++D +
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK-ESRSD 315
P V++ +I+G CK+G V E L M+ P+ T+ ++ L K E
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
+A L + + + GL+ N T+ LI G C+ G+++ A + M+ G+ PD +TY +I
Sbjct: 771 KAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
N LC+ D+K+A +L N M +G++PD++ + TL+ GCC G+M A E++ M+ +G+
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 146/322 (45%), Gaps = 37/322 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEF 215
S+ F L+S +G + DAV+ + + N++ P R N ++ + ++EF
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK-PNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
E+ E G P Y + L+HG C G A++ D + K + + L+ G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G +EE + M + D+ + LI+G K L EM RGL P+ V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM- 394
+T++ID + K G A + +M+++G P+ VTY A+INGLCK G + EA L ++M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 395 --------------------------------NA--RGLKPDKITFTTLMDGCCKDGDME 420
NA +GL + T+ L+ G C+ G +E
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
A E+ RM+ +G+ D + +T
Sbjct: 805 EASELITRMIGDGVSPDCITYT 826
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 4/227 (1%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+++ G + + VL+ G K D + + E+ R L+P V + ++I K+G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ +E F + +M +E P+ T++A+INGLCK +EA L +M VPN VT+
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 338 TLIDGQCKDGKVDL--ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+D K G+VD+ A++ +L +G+ + TYN LI G C+ G ++EA +L+ M
Sbjct: 757 CFLDILTK-GEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G+ PD IT+TT+++ C+ D++ A+E+ M E+GI D VA+
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 152/296 (51%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
F+ ++ + F +LI + + A+ + + K + + +LL
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
V G ++ + +++ GY P V ++N L+ G CK G++ A + +E+ K+ L VV
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++NTL++G C SG + R+ M I PDV TF+ALI+ K+ DEA L+ EM
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
+ + PN VT+ ++I+G C G++ A K F +M +G P++VTYN LI+G CK +
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
E KL M+ G D T+ TL+ G C+ G + AL+I MV + D +
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 150/277 (54%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++ L++ SG DA + +R + K+++ + L+ +K + E Y
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+++ P +N +++G C G + A+ FD + + P VV++NTLISG+CK
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V+EG +L M E D+FT++ LI+G C+ + A +F M R + P+ +T
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ G C +G+++ AL KF M + +V YN +I+GLCK +++A +L +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
G+KPD T+T ++ G CK+G A E+ +RM EEGI
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 126/225 (56%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P + F L+HGFC V I A + + K P VV +NTLI G CK+G
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ L ME + + DV T++ L+ GLC R +A + +M +R + P+ VTFT
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LID K G +D A + ++ M+ + P+ VTYN++INGLC G L +A+K + M ++
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ +T+ TL+ G CK ++ +++ +RM EG D +
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 104/209 (49%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L GF A +F E+ + P++V F L++ E ME
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I D+++F+ LI+ C+ SR A + +M + G P+ VTF +L+ G C ++ A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+M+ G P++V YN LI+GLCK G+L A +LLNEM +GL D +T+ TL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFT 442
C G A + + M++ I D V FT
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 85/174 (48%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ ++ LIS + +D+ ++ + + + + L+ +V + + +
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ P + +L+HG C G+I SA + FD++ + + +V++N +I G CK+
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
VE+ + L + E + PD T++ +I GLCK EA+ L M G++
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 129/215 (60%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ + ++ L+ GFC G + ++ KRK+ P VV+F+ LI + K G + E
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M I PD T+++LI+G CKE++ D+ANH+ D M +G PN TF LI+G
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK +D L+ F+ M +G+ D VTYN LI G C++G L+ A++L EM +R ++PD
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+++ L+DG C +G+ E ALEI +++ + +ELD
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 158/292 (54%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
M + +++ + L++ +G + DAV I + + Q +L+ M K
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E ++ E +++++ G CK G + +A +F+E+ + + ++ + TLI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G+C +G ++G +L M +I PDV FSALI+ KE + EA L EM +RG+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ VT+T+LIDG CK+ ++D A +M+ +G P++ T+N LING CK + + +L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+M+ RG+ D +T+ TL+ G C+ G +E A E+ + MV + D V++ +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 139 GSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
GS + F F ++ + ++++ LI + +G DD + +R + K+ + + A
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
L+ +K + E + E+++ G P + L+ GFCK + A + D +
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+ P + +FN LI+GYCK+ +++G L M + D T++ LI G C+ + +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A LF EM R + P+ V++ L+DG C +G+ + AL+ F+ + + D+ YN +I+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G+C + +A L + +G+KPD T+ ++ G CK G + A + ++M E+G
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 123/222 (55%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ E ++E G+ P + N L++G C G + A L+ D + + +P V++ ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
CKSG L ME +I D +S +I+GLCK+ D A +LF+EM +G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + +TTLI G C G+ D K + M+ + I PD+V ++ALI+ K G L+EA +L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
EM RG+ PD +T+T+L+DG CK+ ++ A + MV +G
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 118/225 (52%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+I++ GY P F+ L++G C G + A + D + + +PT+++ N L++G C +G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V + L M P+ T+ ++ +CK ++ A L +M R + + V ++
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+IDG CKDG +D A F M +G + D++ Y LI G C G + KLL +M R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ PD + F+ L+D K+G + A E+ K M++ GI D V +T
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++++ C+ + A +I K P V+F+TLI+G C G V E
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M P + T +AL+NGLC + +A L D M G PN VT+ ++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G+ LA++ + M ++ I+ D V Y+ +I+GLCK G L A L NEM +G K D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
I +TTL+ G C G + ++ + M++ I D VAF+
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 112/194 (57%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F E+ + + RP ++ F+ L S ++ + L ME + I +++T S +IN C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ + A ++ + G P+ VTF+TLI+G C +G+V AL+ M++ G +P L+
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T NAL+NGLC G + +A L++ M G +P+++T+ ++ CK G A+E+ ++M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 430 VEEGIELDAVAFTM 443
E I+LDAV +++
Sbjct: 239 EERKIKLDAVKYSI 252
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A L +Q + +V + LI + +D A + L+ K +R L+
Sbjct: 336 AEELHKEMIQRGISPDTV-TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K E + ++ G +N L+ GFC++G + A+ +F E+ R++R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P +VS+ L+ G C +G E+ + +E ++ D+ ++ +I+G+C S+ D+A L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F + +G+ P+ T+ +I G CK G + A F+ M + G P+ TYN LI
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
GD ++ KL+ E+ G D T ++D
Sbjct: 575 EGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
++ F++LI+ Y + +DD ++ R + + + L++ ++ + E +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++ P + + +L+ G C G+ A +F++I K K+ + +N +I G C +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
V++ + L + + + PDV T++ +I GLCK+ EA+ LF +M G PNG T+
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
LI +G + K + + G D T +++ L G LK++
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKS 615
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ D+A LF EM R P + F+ L + + DL L + M +GI +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+IN C+ L A + ++ G +PD +TF+TL++G C +G + ALE+ RMVE
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 433 G 433
G
Sbjct: 172 G 172
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 148/286 (51%), Gaps = 1/286 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY-MMKVKPPGPSWEFY 216
+++F+ LI + G +DDA + + +P N L Y K G + E
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P VY + +L+ GFCK+G I A V +E+ L+P V FN LIS +CK
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ E + M + PDV+TF++LI+GLC+ A L +M G+V N VT+
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI+ + G++ A K M+ QG D +TYN+LI GLC+ G++ +AR L +M
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P I+ L++G C+ G +E A+E +K MV G D V F
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 147/277 (53%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V + +L+ + G +D+A + + L+ L+ K + E +
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ G P VY FN L+ G C+V +I+ A + ++ + V++NTLI+ + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G ++E +L M + D T+++LI GLC+ D+A LF++M R G P+ ++
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI+G C+ G V+ A++ + M+ +G PD+VT+N+LINGLC+ G +++ + ++ A
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G+ PD +TF TLM CK G + A + +E+G
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P F+ + +L LVS H A+++F L + ++ F V++ A+ +D A+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDML-SRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+R + K + L+ + K + + E+ G P FN ++ G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K I A + + + R P +++ L++G CK G V+ L + P++
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
F+ LI+G R D+A + +M G+VP+ T+ +LI G K+G V LAL+
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M ++G +P++ +Y L++G CK+G + EA +LNEM+A GLKP+ + F L+ CK+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+ A+EI + M +G + D F
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFN 498
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 158/386 (40%), Gaps = 62/386 (16%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFM 174
W ++ +R + + L+ + G L M + V + IS D
Sbjct: 100 WTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKA 159
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG----------- 223
Q RL+ + +R + +P S+ LEIL G
Sbjct: 160 GFPGQTTRLMLE-------------MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 224 ------YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
PP ++ F V+M FC V +I SA + ++ K P V + TLI K
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V E +L M PD TF+ +I GLCK R +EA + + M RG P+ +T+
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 338 TLIDGQCKDGKVDLALKKF--------------------------------QIMLDQGIR 365
L++G CK G+VD A F ++ GI
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
PD+ TYN+LI G K G + A ++L++M +G KP+ ++T L+DG CK G ++ A +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 426 KKRMVEEGIELDAVAFTMEEVAMQKE 451
M +G++ + V F A KE
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKE 472
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 133/250 (53%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F+ LISA+ + +AV+ R + +K + + +L+ + +V + +++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G +N L++ F + G+I+ AR + +E+ + +++N+LI G C++G V+
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ L M + P + + LINGLC+ +EA EM RG P+ VTF +LI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G C+ G+++ L F+ + +GI PD VT+N L++ LCK G + +A LL+E G
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 401 PDKITFTTLM 410
P+ T++ L+
Sbjct: 702 PNHRTWSILL 711
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V F+ LIS + + A+ +R + + + L+ ++ + +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P +N L+ G C+ G++ AR +F+++ + P+ +S N LI+G C+SG
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
VEE + M PD+ TF++LINGLC+ R ++ +F ++ G+ P+ VTF
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
TL+ CK G V A ++LD+GI V
Sbjct: 674 TLMSWLCKGGFVYDAC----LLLDEGIEDGFV 701
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ ++ LI +G +D A + + +C L+ + + + EF E
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++ G P + FN L++G C+ G I +F ++ + P V+FNTL+S CK G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
V + L + P+ T+S L+ + + D
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSV-LVFDVLISAYTDSGFM 174
L F+ A S+L ++ G + +F + L + S VFD L +
Sbjct: 125 LTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKF 184
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
+A ++ + +C + ++ + FY E+ C P Y N++
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
M G+C+ G + + ++ + R T VS+NTLI+G+C+ G + +LK +M +
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P+V TF+ LI+G C+ + EA+ +F EM + PN VT+ TLI+G + G ++A +
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
++ M+ GI+ D++TYNALI GLCK ++A + + E++ L P+ TF+ L+ G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + E+ K M+ G + F M
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++++S Y SG +D ++ ++ + + + + L+ + + + +
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P V FN L+HGFC+ ++ A VF E+ + P V++NTLI+GY + G+
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E FR M I D+ T++ALI GLCK++++ +A E+ + LVPN TF+ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I GQC D + ++ M+ G P+ T+N L++ C+ D A ++L EM R +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 400 KPDKITFTTLMDGCCKDG 417
D T + +G G
Sbjct: 480 PLDSRTVHQVCNGLKHQG 497
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSV-LVFDVLISAYTDSGFM 174
L F+ A S+L ++ G + +F + L + S VFD L +
Sbjct: 125 LTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKF 184
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
+A ++ + +C + ++ + FY E+ C P Y N++
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
M G+C+ G + + ++ + R T VS+NTLI+G+C+ G + +LK +M +
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P+V TF+ LI+G C+ + EA+ +F EM + PN VT+ TLI+G + G ++A +
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
++ M+ GI+ D++TYNALI GLCK ++A + + E++ L P+ TF+ L+ G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + E+ K M+ G + F M
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++++S Y SG +D ++ ++ + + + + L+ + + + +
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P V FN L+HGFC+ ++ A VF E+ + P V++NTLI+GY + G+
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E FR M I D+ T++ALI GLCK++++ +A E+ + LVPN TF+ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I GQC D + ++ M+ G P+ T+N L++ C+ D A ++L EM R +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 400 KPDKITFTTLMDGCCKDG 417
D T + +G G
Sbjct: 480 PLDSRTVHQVCNGLKHQG 497
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 160/294 (54%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + V++F+ +I + +DDA+ + + K ++ + +L+ +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + +++E P + FN L+ F K G A ++D++ KR + P + ++N+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L++G+C +++ ++ M S+ FPDV T++ LI G CK R ++ LF EM RG
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV + VT+TTLI G DG D A K F+ M+ G+ PD++TY+ L++GLC G L++A
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ + M +K D +TT+++G CK G ++ ++ + +G++ + V +
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +++ + V+++ G D A+ + + ++ + ++ + K + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V ++ L+ C G A + ++ ++K+ P +V+FN LI +
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G E +L M I PD+FT+++L+NG C R D+A +F+ M + P+ V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI G CK +V+ + F+ M +G+ D VTY LI GL GD A+K+ +M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G+ PD +T++ L+DG C +G +E ALE+ M + I+LD +T
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 131/216 (60%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V +FN ++ CK + A +F E+ + +RP VV++++LIS C G + +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M ++I P++ TF+ALI+ KE + EA L+D+M +R + P+ T+ +L++G C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++D A + F+ M+ + PD+VTYN LI G CK +++ +L EM+ RGL D +T+T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
TL+ G DGD ++A ++ K+MV +G+ D + +++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 151/285 (52%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++T + +V+ + LIS G DA Q + + +K + L L+ +K
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + Y ++++ P ++ +N L++GFC + A+ +F+ + + P VV++NT
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI G+CKS VE+G L M + D T++ LI GL + D A +F +M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ +T++ L+DG C +GK++ AL+ F M I+ D+ Y +I G+CK G + +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
L ++ +G+KP+ +T+ T++ G C ++ A + K+M E+G
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
CF R+ S + + + + S++ L++ Y + DAV + + +
Sbjct: 129 CF--CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ L+ + + +++ G P + + V+++G CK GD A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+ +++ K+ VV FNT+I CK +V++ L ME++ I P+V T+S+LI+ LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
R +A+ L +M + + PN VTF LID K+GK A K + M+ + I PD+
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYN+L+NG C L +A+++ M ++ PD +T+ TL+ G CK +E E+ + M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 430 VEEGIELDAVAFT 442
G+ D V +T
Sbjct: 427 SHRGLVGDTVTYT 439
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 119/224 (53%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
+Y +N+L++ FC+ I A + ++ K P++V+ ++L++GYC + + L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M PD TF+ LI+GL +++ EA L D M +RG PN VT+ +++G CK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
DLAL M I D+V +N +I+ LCK + +A L EM +G++P+ +T++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+L+ C G A ++ M+E+ I + V F A KE
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 112/217 (51%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + FN L+ K+ + +++ + ++ + ++N LI+ +C+ + L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G M P + T S+L+NG C R +A L D+M G P+ +TFTTLI G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K A+ M+ +G +P+LVTY ++NGLCK GD A LLN+M A ++ D +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
F T++D CK ++ AL + K M +GI + V ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++ L++ + +D A Q + K+ + L++ K K E +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G + L+ G GD +A+ VF ++ + P +++++ L+ G C +G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E+ + M+ I D++ ++ +I G+CK + D+ LF + +G+ PN VT+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I G C + A + M + G P+ TYN LI + GD + +L+ EM +
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L G M R P + F+ L++ + K + D L ++M R +V T+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI+ C+ ++ LAL M+ G P +VT ++L+NG C + +A L+++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+PD ITFTTL+ G A+ + RMV+ G + + V +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L NGL + + D+A LF M + +P+ V F L+ K K D+ + + M
Sbjct: 57 LRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
I L TYN LIN C+ + A LL +M G +P +T ++L++G C + A+
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 424 EIKKRMVEEGIELDAVAFT 442
+ +MVE G D + FT
Sbjct: 176 ALVDQMVEMGYRPDTITFT 194
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/160 (18%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ + +L+ ++G ++ A++ ++K +++ + ++ M K W+ +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P V +N ++ G C ++ A + ++ + P ++NTLI + + G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
+ L M S R D T L+ + + R D++
Sbjct: 590 DKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 628
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +V F+V+I+A +G M+ A + ++ + + L+ K+ G ++
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 215 ---FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
E++E P + FN+L+ GF K ++ + VF E+ + ++P V+S+N+LI+
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G C G + E ++ M S + P++ T++ALING CK EA +F + +G VP
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ LID CK GK+D + M +GI PD+ TYN LI GLC+ G+++ A+KL
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+++ ++GL PD +TF LM+G C+ G+ A + K M + G++
Sbjct: 460 DQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 3/330 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
LA + + S L V S+F + + ++ D+L+ AY ++ +
Sbjct: 111 LANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFE 170
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+ + ++ +C+ L+ ++K Y E++ P V+ FNV++
Sbjct: 171 LGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVI 230
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV---MESE 292
+ CK G + AR V +++ P VVS+NTLI GYCK G + ++ V M
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
+ P++ TF+ LI+G K+ + +F EM + + PN +++ +LI+G C GK+ A
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ M+ G++P+L+TYNALING CK LKEA + + +G P + L+D
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 413 CCKDGDMESALEIKKRMVEEGIELDAVAFT 442
CK G ++ +K+ M EGI D +
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 40/245 (16%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++ G P + +N L++GFCK ++ A +F + + PT +N LI YCK G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+++GF LK ME E I PDV T++ LI GLC+ + A LFD++ +GL P+ VTF
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFH 474
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK------------ 385
L++G C+ G+ A + M G++P +TYN ++ G CK G+LK
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 386 ------------------------EARKLLNEMNARGLKPDKITFTTLMDGCCKDG---D 418
+A LLNEM +GL P++IT+ + + G D
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Query: 419 MESAL 423
+E L
Sbjct: 595 IEGHL 599
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++++LI AY G +DD + ++ + + L+ + + + + + ++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
G P V F++LM G+C+ G+ R A ++ E+ K L+P +++N ++ GYCK GN+
Sbjct: 463 TSKGLPDLV-TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 280 EEGFRLKGVMESE-RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ ++ ME E R+ +V +++ L+ G ++ + ++AN L +EM +GLVPN +T+
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
+ + M+DQG PD+
Sbjct: 582 VKEE----------------MVDQGFVPDI 595
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 35/312 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
V++++ +I A + ++DA+ + K ++ + +L+R + +
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++E P V F+ L+ F K G + A ++DE+ KR + P + ++++LI+G+C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++E + +M S+ FP+V T++ LI G CK R DE LF EM +RGLV N VT+
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 337 TTLI-----------------------------------DGQCKDGKVDLALKKFQIMLD 361
TTLI DG C +GKV+ AL F+ +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
+ PD+ TYN +I G+CK G +++ L ++ +G+KP+ +T+TT+M G C+ G E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 422 ALEIKKRMVEEG 433
A + + M EEG
Sbjct: 555 ADALFREMKEEG 566
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q ++ + ++++ G +D A+ ++ + + ++ + ++ + K +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V +N L+ C G A + ++ +RK+ P VV+F+ LI +
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + E +L M I PD+FT+S+LING C R DEA H+F+ M + PN V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI G CK +VD ++ F+ M +G+ + VTY LI+G + + A+ + +M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ G+ PD +T++ L+DG C +G +E+AL + + + +E D + +
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 159/318 (50%)
Query: 125 AHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLV 184
+S+L R+ S + + + + + ++ + L++ + + DAV + +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+ Q L+ + + + ++ G P + + ++++G CK GDI
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
A + ++ + K+ P VV +NT+I C NV + L M+++ I P+V T+++L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I LC R +A+ L +M R + PN VTF+ LID K+GK+ A K + M+ + I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
PD+ TY++LING C L EA+ + M ++ P+ +T+ TL+ G CK ++ +E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 425 IKKRMVEEGIELDAVAFT 442
+ + M + G+ + V +T
Sbjct: 418 LFREMSQRGLVGNTVTYT 435
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 122/229 (53%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++L++ FC+ + A V ++ K P +V+ N+L++G+C + +
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L G M PD FTF+ LI+GL + +R+ EA L D M +G P+ VT+ +++G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G +DLAL + M I P +V YN +I+ LC ++ +A L EM+ +G++P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+T+ +L+ C G A + M+E I + V F+ A KE
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 156/314 (49%), Gaps = 3/314 (0%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDD 176
RP +SL+ L + AS L + ++ +V+ F LI A+ G + +
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVE 344
Query: 177 AVQCIRLVRKKNLQIPLRACENLLR-YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + + K+++ + +L+ + M + F L I + +P V +N L+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLI 403
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
GFCK + +F E+ +R L V++ TLI G+ ++ + + M S+ +
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PD+ T+S L++GLC + + A +F+ + R + P+ T+ +I+G CK GKV+
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F + +G++P++VTY +++G C+ G +EA L EM G PD T+ TL+ +
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 416 DGDMESALEIKKRM 429
DGD ++ E+ + M
Sbjct: 584 DGDKAASAELIREM 597
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ + LI+ + +D+A L+ K+ + L++ K K E +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G + L+HGF + + +A++VF ++ + P +++++ L+ G C +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
VE + ++ ++ PD++T++ +I G+CK + ++ LF + +G+ PN VT+T
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T++ G C+ G + A F+ M ++G PD TYN LI + GD + +L+ EM +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 106/193 (54%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F ++ K + P++V F+ L+S K + L M++ I +++T+S LIN C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A + +M + G P+ VT +L++G C ++ A+ M++ G +PD
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+N LI+GL + EA L++ M +G +PD +T+ +++G CK GD++ AL + K+M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 430 VEEGIELDAVAFT 442
+ IE V +
Sbjct: 248 EQGKIEPGVVIYN 260
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + F+ L+ K+ + +++ + + +++ LI+ +C+ + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M PD+ T ++L+NG C +R +A L +M G P+ TF TLI G +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+ A+ M+ +G +PDLVTY ++NGLCK GD+ A LL +M ++P +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ T++D C ++ AL + M +GI + V +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L G M R FP + FS L++ + K ++ D L ++M G+ N T++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI+ C+ ++ LAL M+ G PD+VT N+L+NG C + +A L+ +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+PD TF TL+ G + A+ + RMV +G + D V +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 155/288 (53%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ V+++ +I + +DDA+ + K ++ + +L+ + +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
++LE P V FN L+ F K G + A +FDE+ +R + P +V++N+LI+G+C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++E ++ +M S+ PDV T++ LING CK + + LF +M RRGLV N V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+TTLI G + D A F+ M+ G+ P+++TYN L++GLCK G L++A + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++PD T+ + +G CK G +E ++ + +G++ D +A+
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 147/276 (53%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V + LIS + G DA + + + ++ + + +L+ K + + +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+++ P + +N L++GFC + A+ +F + + P VV++NTLI+G+CK+
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V +G L M + + T++ LI+G + S D A +F +M G+ PN +T+
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TL+DG CK+GK++ A+ F+ + + PD+ TYN + G+CK G +++ L ++ +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G+KPD I + T++ G CK G E A + +M E+G
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 152/296 (51%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q ++ + +I+ G D A+ + + K ++ + ++ + K + +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V+ ++ L+ C G A + ++ +RK+ P VV+FN+LI +
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + E +L M I P++ T+++LING C R DEA +F M + +P+ V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI+G CK KV ++ F+ M +G+ + VTY LI+G + D A+ + +M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
+ G+ P+ +T+ TL+DG CK+G +E A+ + + + + +E D + + M K
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 128/220 (58%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + + +++G CK G+ A + +++ K K+ VV ++T+I CK +V++
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M+++ I PDVFT+S+LI+ LC R +A+ L +M R + PN VTF +LID
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K+GK+ A K F M+ + I P++VTYN+LING C L EA+++ M ++ PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+T+ TL++G CK + +E+ + M G+ + V +T
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 126/225 (56%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P + N L++GFC I A + D++ + +P V+F TL+ G +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E L M + PD+ T+ A+INGLCK D A +L ++M + + + V ++
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+ID CK VD AL F M ++GIRPD+ TY++LI+ LC G +A +LL++M R
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ P+ +TF +L+D K+G + A ++ M++ I+ + V +
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 121/225 (53%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E GY P F L+HG + A + + + + +P +V++ +I+G CK G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ L ME +I DV +S +I+ LCK D+A +LF EM +G+ P+ T++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+LI C G+ A + ML++ I P++VT+N+LI+ K G L EA KL +EM R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ P+ +T+ +L++G C ++ A +I MV + D V +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+EIL G +Y +N++++ C+ + A + ++ K P++V+ N+L++G+C
Sbjct: 91 MEIL--GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ E L M PD TF+ L++GL + +++ EA L + M +G P+ VT+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+I+G CK G+ DLAL M I D+V Y+ +I+ LCK + +A L EM+
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+G++PD T+++L+ C G A + M+E I + V F A KE
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF +Q +++ ++ LI+ + +D+A Q L+ K+ + L+
Sbjct: 329 AEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K K E + ++ G + L+HGF + D +A++VF ++ +
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P ++++NTL+ G CK+G +E+ + ++ ++ PD++T++ + G+CK + ++ L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F + +G+ P+ + + T+I G CK G + A F M + G PD TYN LI +
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
GD + +L+ EM + D T+ + D
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 104/193 (53%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F E+ K + P++V F+ L+S K + ME + +++T++ +IN LC
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A + +M + G P+ VT +L++G C ++ A+ M++ G +PD V
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+ L++GL + EA L+ M +G +PD +T+ +++G CK G+ + AL + +M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 430 VEEGIELDAVAFT 442
+ IE D V ++
Sbjct: 232 EKGKIEADVVIYS 244
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++E L G M R FP + FS L++ + K + D ++M G+ N T+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I+ C+ ++ AL M+ G P +VT N+L+NG C + EA L+++M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+PD +TFTTL+ G + A+ + +RMV +G + D V +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%)
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
DEA LF EM + P+ V F+ L+ K K DL + + M G+ +L TYN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
IN LC+ L A +L +M G P +T +L++G C + A+ + +MVE G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 435 ELDAVAFT 442
+ D V FT
Sbjct: 167 QPDTVTFT 174
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ L+ +G ++ A+ ++K ++ + + M K W+ +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ G P V +N ++ GFCK G A +F ++ + P ++NTLI + +
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
G+ L M S R D T+ L+ + + R D+
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 124/209 (59%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G+ P V ++N ++ G CK+G + A +FD + + +R V++N+L++G C SG
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ RL M I P+V TF+A+I+ KE + EA L++EM RR + P+ T+ +LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G C G+VD A + +M+ +G PD+VTYN LING CK + E KL EM RGL
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRM 429
D IT+ T++ G + G ++A EI RM
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 131/225 (58%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P V + L++GFC+ + A + ++ + RP VV +NT+I G CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V + L ME + + D T+++L+ GLC R +A L +M R +VPN +TFT
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ID K+GK A+K ++ M + + PD+ TYN+LINGLC G + EA+++L+ M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G PD +T+ TL++G CK ++ ++ + M + G+ D + +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 160/322 (49%), Gaps = 32/322 (9%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
S ++ M + V++++ +I G ++DAV+ + + ++ +L+ +
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ +++ P V F ++ F K G A +++E+ +R + P V
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++N+LI+G C G V+E ++ +M ++ PDV T++ LING CK R DE LF EM
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 325 CRRGLVPNGVTFTTLIDGQ--------------------------------CKDGKVDLA 352
+RGLV + +T+ T+I G C + +V+ A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
L F+ M I D+ TYN +I+G+CK+G++++A L ++ +GLKPD +++TT++ G
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 413 CCKDGDMESALEIKKRMVEEGI 434
C+ + + + ++M E+G+
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGL 482
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 101/182 (55%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P++V F+ ++S KS N + L ME I D+++++ +IN LC+ SR A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+M + G P+ VT ++LI+G C+ +V A+ M + G RPD+V YN +I+G CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+G + +A +L + M G++ D +T+ +L+ G C G A + + MV I + +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 441 FT 442
FT
Sbjct: 247 FT 248
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 32/280 (11%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW 213
+ + ++ L++ SG DA + +R + +++ + ++ +K +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ Y E+ P V+ +N L++G C G + A+ + D + + P VV++NTLI+G+
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 274 CKSGNVEEGFRL--------------------KGVMESER------IF------PDVFTF 301
CKS V+EG +L +G ++ R IF P++ T+
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
S L+ GLC R ++A LF+ M + + + T+ +I G CK G V+ A F+ +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
+G++PD+V+Y +I+G C+ ++ L +M GL P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 257 RKLRPTVVSFNTLISGYC-----KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
+K P +V F + G S N+EE L M R P + FS +++ + K
Sbjct: 23 QKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKS 82
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
D LF M G+ + ++ +I+ C+ + +AL M+ G PD+VT
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 142
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
++LING C+ + +A L+++M G +PD + + T++DG CK G + A+E+ RM
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 432 EGIELDAVAFT 442
+G+ DAV +
Sbjct: 203 DGVRADAVTYN 213
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 124/222 (55%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G P + VL+ C G I A +FDE+ R +P V ++ LI G C+ G +E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E + M +RIFP V T++ALING CK+ R A L M +R PN TF L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G C+ GK A+ + MLD G+ PD+V+YN LI+GLC+ G + A KLL+ MN ++
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
PD +TFT +++ CK G + A M+ +GI LD V T
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 1/230 (0%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGY 273
F +IL+ G+ ++ L+ GFC+ ++R A VFD + K P VS++ LI G
Sbjct: 217 FMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGL 276
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C+ G +EE F LK M + P T++ LI LC D+A +LFDEM RG PN
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+T LIDG C+DGK++ A + M+ I P ++TYNALING CK G + A +LL
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M R KP+ TF LM+G C+ G A+ + KRM++ G+ D V++ +
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 16/307 (5%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDV----------------LISAYTDSGFMDDAVQCIRLV 184
+SL F + + + ++ VFDV LI + G +++A +
Sbjct: 233 GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+K Q R L++ + ++ + E++ G P V+ + VL+ G C+ G I
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
A V ++ K ++ P+V+++N LI+GYCK G V F L VME P+V TF+ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
+ GLC+ + +A HL M GL P+ V++ LIDG C++G ++ A K M I
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
PD +T+ A+IN CK G A L M +G+ D++T TTL+DG CK G AL
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 425 IKKRMVE 431
I + +V+
Sbjct: 533 ILETLVK 539
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 126/218 (57%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P +++L+HG C+VG + A + D++ ++ +P+ ++ LI C G +++ F
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L M P+V T++ LI+GLC++ + +EAN + +M + + P+ +T+ LI+G C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
KDG+V A + +M + +P++ T+N L+ GLC+VG +A LL M GL PD +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ L+DG C++G M +A ++ M IE D + FT
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 154/316 (48%), Gaps = 35/316 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ ++ LI+ Y G + A + + ++ K+ + +R L+ + +V P +
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+L+ G P + +NVL+ G C+ G + +A + + + P ++F +I+ +CK
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR--------- 327
G + G+M + I D T + LI+G+CK ++ +A + + + +
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 328 --------------------------GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
GLVP+ VT+TTL+DG + G + + + ++M
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
G P++ Y +INGLC+ G ++EA KLL+ M G+ P+ +T+T ++ G +G ++
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 422 ALEIKKRMVEEGIELD 437
ALE + MVE G EL+
Sbjct: 670 ALETVRAMVERGYELN 685
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 158/336 (47%), Gaps = 19/336 (5%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
R+GH + + S + + L F +I+A+ G D A + L+ +K + +
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
L+ + KV + +++ + NV++ K ++ + +I
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
K L P+VV++ TL+ G +SG++ FR+ +M+ P+V+ ++ +INGLC+ R
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+EA L M G+ PN VT+T ++ G +GK+D AL+ + M+++G + Y++L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 375 ING--LCKVGDLKEARKLLNEMNARGLKPD----KITFTTLMDGC------------CKD 416
+ G L + G ++++ R P+ I+ + GC CK+
Sbjct: 693 LQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKE 752
Query: 417 GDMESALEIKKRMVEEGIELD-AVAFTMEEVAMQKE 451
G + + ++ + ++E G+ L+ A+ ME +K+
Sbjct: 753 GRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKK 788
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV------------------ 330
ME++ + + ++N LCK ++ A ++ + G V
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 331 ------------------PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
PN V+++ LI G C+ G+++ A M ++G +P TY
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
LI LC G + +A L +EM RG KP+ T+T L+DG C+DG +E A + ++MV++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 433 GI 434
I
Sbjct: 366 RI 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 55/249 (22%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN---- 278
G P VY + ++++G C+ G + A + + + P V++ ++ GY +G
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 279 -------VEEGFRL----------------KGVMESER------------------IFPD 297
VE G+ L KG+ SE +
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730
Query: 298 VFTFSALINGLC--------KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
V I+GLC KE R+DE+N L + RG+ +++ C K
Sbjct: 731 VEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKH 789
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
++ ++L G P ++ +I GL K GD + AR+L+ E+ +K T
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTY 849
Query: 410 MDGCCKDGD 418
++ C +GD
Sbjct: 850 VE-CLMEGD 857
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 36/179 (20%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL--------- 351
+S+L+ L K A + M G V + + T+++ CK+G +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 352 --------------------------ALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDL 384
ALK F +M + P+ V+Y+ LI+GLC+VG L
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+EA L ++M +G +P T+T L+ C G ++ A + M+ G + + +T+
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 161/311 (51%)
Query: 133 VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP 192
+ R G S + ++ + V + +I + G +D A+ + + K ++
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+ +L+R + K +++ P V FNVL+ F K G ++ A ++
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
E+ R + P ++++NTL+ GYC + E + +M + PD+ TF++LI G C
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
R D+ +F + +RGLV N VT++ L+ G C+ GK+ LA + FQ M+ G+ PD++TY
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
L++GLC G L++A ++ ++ + + +TT+++G CK G +E A + + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 433 GIELDAVAFTM 443
G++ + + +T+
Sbjct: 503 GVKPNVMTYTV 513
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 153/294 (52%), Gaps = 1/294 (0%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL 199
+A SLF ++T + SV+ ++ L+ +G +D ++ + + + + L
Sbjct: 246 AAISLFKE-METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 200 LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL 259
L +K + E Y E++ G P + +N LM G+C + A + D + + K
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
P +V+F +LI GYC V++G ++ + + + T+S L+ G C+ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
LF EM G++P+ +T+ L+DG C +GK++ AL+ F+ + + +V Y +I G+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
K G +++A L + +G+KP+ +T+T ++ G CK G + A + ++M E+G
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 124/225 (55%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P FN L+ G G + A ++ D + + +P VV++N++++G C+SG
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ L ME + DVFT+S +I+ LC++ D A LF EM +G+ + VT+
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+L+ G CK GK + + M+ + I P+++T+N L++ K G L+EA +L EM R
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G+ P+ IT+ TLMDG C + A + MV D V FT
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 122/229 (53%), Gaps = 2/229 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y N++++ FC+ A V ++ K P +FNTLI G G V E
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PDV T+++++NG+C+ + A L +M R + + T++T+ID
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+DG +D A+ F+ M +GI+ +VTYN+L+ GLCK G + LL +M +R + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT--MEEVAMQ 449
ITF L+D K+G ++ A E+ K M+ GI + + + M+ MQ
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 130/225 (57%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++E G P V +N +++G C+ GD A + ++ +R ++ V +++T+I C+ G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++ L ME++ I V T+++L+ GLCK + ++ L +M R +VPN +TF
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+D K+GK+ A + ++ M+ +GI P+++TYN L++G C L EA +L+ M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
PD +TFT+L+ G C ++ +++ + + + G+ +AV +++
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 106/192 (55%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F E+ + + P++V F+ S ++ +E I +++T + +IN C
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ ++ A + ++ + G P+ TF TLI G +GKV A+ M++ G +PD+V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYN+++NG+C+ GD A LL +M R +K D T++T++D C+DG +++A+ + K M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 430 VEEGIELDAVAF 441
+GI+ V +
Sbjct: 255 ETKGIKSSVVTY 266
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 126/255 (49%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ L+ Y + +A + L+ + + +L++ VK + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
I + G +++L+ GFC+ G I+ A +F E+ + P V+++ L+ G C +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E+ + ++ ++ + ++ +I G+CK + ++A +LF + +G+ PN +T+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T +I G CK G + A + M + G P+ TYN LI + GDL + KL+ EM +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 397 RGLKPDKITFTTLMD 411
G D + ++D
Sbjct: 572 CGFSADASSIKMVID 586
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ F LI Y +DD ++ R + K+ L L++ + + E +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P V + +L+ G C G + A +F+++ K K+ +V + T+I G CK G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
VE+ + L + + + P+V T++ +I+GLCK+ EAN L +M G PN T+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
TLI +DG + + K + M G D + +I+ L
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR----GLVPNGVTFTTLIDGQC 344
M R P + FS + + +R+ + N + D C++ G+ N T +I+ C
Sbjct: 79 MIRSRPLPSLVDFSRFFSAI---ARTKQFNLVLD-FCKQLELNGIAHNIYTLNIMINCFC 134
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+ K A ++ G PD T+N LI GL G + EA L++ M G +PD +
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ ++++G C+ GD AL++ ++M E ++ D ++
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 301 FSALING-LCKESR---------SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
FS++ NG +C R D+A LF EM R +P+ V F+ + + +
Sbjct: 46 FSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN 105
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
L L + + GI ++ T N +IN C+ A +L ++ G +PD TF TL+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G +G + A+ + RMVE G + D V +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 129/226 (57%), Gaps = 2/226 (0%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
W ++ ++++ G+ P + F L+ G CK G I+ A + +E+ + +P V + LI G
Sbjct: 273 W-YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 273 YCKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
CK G E+ FRL ++ S+ P+V T++++I G CKE + + A LF M +GL P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N T+TTLI+G CK G A + +M D+G P++ TYNA I+ LCK EA +LL
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
N+ + GL+ D +T+T L+ CK D+ AL RM + G E D
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 122/218 (55%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
Y P V+ + ++ G+CK + A ++F + ++ L P V ++ TLI+G+CK+G+ +
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L +M E P+++T++A I+ LCK+SR+ EA L ++ GL +GVT+T LI Q
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
CK ++ AL F M G D+ N LI C+ +KE+ +L + + GL P K
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
T+T+++ CK+GD++ AL+ M G D+ +
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 4/235 (1%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G+ P +++ C+ G + A F ++ +P +++F +LI G CK G+
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV-PNGVTFT 337
+++ F + M P+V+T +ALI+GLCK +++A LF ++ R PN T+T
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++I G CK+ K++ A F M +QG+ P++ TY LING CK G A +L+N M
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
G P+ T+ +D CK A E+ + G+E D V +T + +Q++C
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT---ILIQEQC 474
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
+P +L+ L R A LF +++ + +V + +I Y ++ A
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
++++ L + L+ K G ++E + + G+ P +Y +N +
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
CK A + ++ L V++ LI CK ++ + M D+
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+ LI C++ + E+ LF + GL+P T+T++I CK+G +DLALK F
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M G PD TY +LI+GLCK + EA KL M RGL P ++T TL CK D
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Query: 419 MESAL 423
+A+
Sbjct: 619 SANAM 623
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
L+ NLQ +LR ++ + +++ G P N ++ ++G
Sbjct: 137 LLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELG 196
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
I A VFDE+ R + P S+ ++ G + G ++E R M PD T +
Sbjct: 197 LIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
++ LC+ + A F +M G PN + FT+LIDG CK G + A + + M+
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 363 GIRPDLVTYNALINGLCKVGDLKEA-RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
G +P++ T+ ALI+GLCK G ++A R L + + KP+ T+T+++ G CK+ +
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 422 ALEIKKRMVEEGI 434
A + RM E+G+
Sbjct: 377 AEMLFSRMKEQGL 389
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 6/289 (2%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V + LI+ + +G A + + L+ + + + + K ++E
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ CG + +L+ CK DI A F + K + N LI+ +C+
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++E RL ++ S + P T++++I+ CKE D A F M R G VP+ T+
Sbjct: 512 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+LI G CK VD A K ++ M+D+G+ P VT L CK D A LL ++
Sbjct: 572 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV---AFT 442
K T TL+ C + + A ++++E+ D V AFT
Sbjct: 632 ---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 677
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 3/231 (1%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L++ K + F+ + + G+ + L N+L+ FC+ ++ + +F +
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
L PT ++ ++IS YCK G+++ + M+ PD FT+ +LI+GLCK+S DEA
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
L++ M RGL P VT TL CK A+ + LD+ + + T L+ L
Sbjct: 589 KLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEP-LDKKLW--IRTVRTLVRKL 645
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
C + A ++ + D++T C + G ++ +R+
Sbjct: 646 CSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 69/130 (53%)
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
R +EA + +M +GL P+ +T +++ + G ++ A F M +G+ PD +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
++ G + G ++EA + L M RG PD T T ++ C++G + A+ ++M++
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 433 GIELDAVAFT 442
G + + + FT
Sbjct: 282 GFKPNLINFT 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%)
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
G+++ A+ M +QG+ P +T N ++ ++G ++ A + +EM+ RG+ PD ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++ GC +DG ++ A M++ G D T+
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 13/294 (4%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW-- 213
+V F LISAY SG ++A+ +++ L+ NL+ Y + G
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLR------PNLVTYNAVIDACGKGGME 319
Query: 214 -----EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+F+ E+ G P FN L+ + G +AR +FDE+ R++ V S+NT
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L+ CK G ++ F + M +RI P+V ++S +I+G K R DEA +LF EM G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ + V++ TL+ K G+ + AL + M GI+ D+VTYNAL+ G K G E +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
K+ EM + P+ +T++TL+DG K G + A+EI + G+ D V ++
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+Q Q + F+ L++ + G + A + + ++ + + LL + K
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
++E ++ P V ++ ++ GF K G A +F E+ + VS+NT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L+S Y K G EE + M S I DV T++AL+ G K+ + DE +F EM R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
++PN +T++TLIDG K G A++ F+ G+R D+V Y+ALI+ LCK G + A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
L++EM G+ P+ +T+ +++D + M+ + +
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE-- 280
GY VY F+ L+ + + G A VF+ + + LRP +V++N +I C G +E
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFK 321
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ + M+ + PD TF++L+ + + A +LFDEM R + + ++ TL+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
D CK G++DLA + M + I P++V+Y+ +I+G K G EA L EM G+
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
D++++ TL+ K G E AL+I + M GI+ D V +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 59/315 (18%)
Query: 139 GSASSLFASFLQTMPTQQ---SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA 195
G L L MP ++ +V+ + +I + +G D+A+ +R + + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
LL KV + + E+ G V +N L+ G+ K G + VF E+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
+ + P +++++TLI GY K G +E + +S + DV +SALI+ LCK
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLID---------------------------------- 341
A L DEM + G+ PN VT+ ++ID
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 342 --------GQ------------CKDGKVDLA--LKKFQIMLDQGIRPDLVTYNALINGLC 379
GQ C++G +L+ L+ F+ M I+P++VT++A++N
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Query: 380 KVGDLKEARKLLNEM 394
+ ++A LL E+
Sbjct: 687 RCNSFEDASMLLEEL 701
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPN--GVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
+I L + D+A ++ +R N G + +I + GKV +A + F+
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG-DME 420
G + ++ALI+ + G +EA + N M GL+P+ +T+ ++D C K G + +
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 421 SALEIKKRMVEEGIELDAVAF 441
+ M G++ D + F
Sbjct: 322 QVAKFFDEMQRNGVQPDRITF 342
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 1/216 (0%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+L P V +N LMHG+ K+G A L+FD++ + P++V++NTLI G C+SG
Sbjct: 364 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
N+E RLK M ++ IFPDV T++ L+ G K A ++DEM R+G+ P+G +T
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIR-PDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T G+ + G D A + + M+ PDL YN I+GLCKVG+L +A + ++
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
GL PD +T+TT++ G ++G + A + M+ +
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 32/297 (10%)
Query: 182 RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
+++RK L +R C +L+ + + + Y ++E G P V FN ++ K
Sbjct: 193 KMIRKGFLP-SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKA 251
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
GD+ ++ E+ +R + + V++N LI+G+ K+G +EE R G M ++F
Sbjct: 252 GDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSF 311
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD----------- 350
+ LI G CK+ D+A + DEM G+ P T+ I C G++D
Sbjct: 312 NPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA 371
Query: 351 -------------LALKKF---QIMLDQ----GIRPDLVTYNALINGLCKVGDLKEARKL 390
+ + KF ++ D I P +VTYN LI+GLC+ G+L+ A++L
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVA 447
EM + + PD IT+TTL+ G K+G++ A E+ M+ +GI+ D A+T V
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 3/306 (0%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP-L 193
+ G +SL L+ S++ ++ LI +SG ++ A Q ++ L P +
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGA-QRLKEEMTTQLIFPDV 444
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSA-RLVFD 252
L++ +K + E Y E+L G P Y + G ++GD A RL +
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+ P + +N I G CK GN+ + + + + PD T++ +I G +
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ A +L+DEM R+ L P+ +T+ LI G K G+++ A + M +G+RP+++T+N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
AL+ G+CK G++ EA + L +M G+ P+K ++T L+ C E +++ K M+++
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 433 GIELDA 438
IE D
Sbjct: 685 EIEPDG 690
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V + L+ GF K G++ A V+DE+ ++ ++P ++ T G + G+ ++ FRL
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 286 KGVM-ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
M ++ PD+ ++ I+GLCK +A ++ R GLVP+ VT+TT+I G
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
++G+ +A + ML + + P ++TY LI G K G L++A + EM RG++P+ +
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
T L+ G CK G+++ A +M EEGI + ++TM
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTM 660
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 150 QTMPTQQ---SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKV 206
+ M TQ V+ + L+ + +G + A + + +K ++ A +++
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 207 KPPGPSWEFYLEILECGY-PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS 265
++ + E++ + P + ++NV + G CKVG++ A +I + L P V+
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
+ T+I GY ++G + L M +R++P V T+ LI G K R ++A EM
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
+RG+ PN +T L+ G CK G +D A + M ++GI P+ +Y LI+ C +
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
E KL EM + ++PD T L KD
Sbjct: 673 EVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
EF +I G P + ++ G+ + G + AR ++DE+ +++L P+V+++ LI G+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
K+G +E+ F+ M+ + P+V T +AL+ G+CK DEA +M G+ PN
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
++T LI C K + +K ++ MLD+ I PD T+ AL L K + +E L
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
++++ E+ + G P V N L++G CK G+I A ++ + + P S+ LIS
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
C EE +L M + I PD +T AL L K+ S E L
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 168/331 (50%), Gaps = 16/331 (4%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFA-SFLQTMP---TQQSVLVFDVLISAYTDSGFM 174
R F S +C L K FA + +MP + V+ ++ LI + +G +
Sbjct: 56 RSSFNSVVSFVCKLGQVK--------FAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI 107
Query: 175 DDAVQCIRLVRKKNLQI---PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
A + +R + I + + +L K+K + + +L+C P V +
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTY 166
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+ + FCK G+++ A F + + L P VV+F LI GYCK+G++E L M
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
R+ +V T++ALI+G CK+ A ++ M + PN + +TT+IDG + G D
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A+K ML+QG+R D+ Y +I+GLC G LKEA +++ +M L PD + FTT+M+
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 412 GCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
K G M++A+ + +++E G E D VA +
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 143/264 (54%), Gaps = 5/264 (1%)
Query: 182 RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
RL + NL P C + ++ S +F ++ GY P FN ++ CK+
Sbjct: 11 RLRKSSNLPDPF-TCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKL 69
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF---PDV 298
G ++ A + +P+ P V+S+N+LI G+C++G++ + + + F PD+
Sbjct: 70 GQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI 129
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+F++L NG K DE ++ + + PN VT++T ID CK G++ LALK F
Sbjct: 130 VSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHS 188
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M + P++VT+ LI+G CK GDL+ A L EM + + +T+T L+DG CK G+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
M+ A E+ RMVE+ +E +++ +T
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYT 272
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 152/316 (48%), Gaps = 30/316 (9%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + I + SG + A++ +++ L + L+ K + Y
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ V + L+ GFCK G+++ A ++ + + ++ P + + T+I G+ +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G+ + + M ++ + D+ + +I+GLC + EA + ++M + LVP+ V F
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT-------------------------- 370
TT+++ K G++ A+ + ++++G PD+V
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 371 ----YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
Y LI+ LCK GD E +L ++++ GL PDK +T+ + G CK G++ A ++K
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 427 KRMVEEGIELDAVAFT 442
RMV+EG+ LD +A+T
Sbjct: 462 TRMVQEGLLLDLLAYT 477
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 30/325 (9%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ F LI Y +G ++ AV + +R+ + + + L+ K + E Y
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++E P ++ ++ GF + GD +A ++ + +R + ++ +ISG C +
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP----- 331
G ++E + ME + PD+ F+ ++N K R A +++ ++ RG P
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 332 -------------------------NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
N V +T LID CK+G + F + + G+ P
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
D Y + I GLCK G+L +A KL M GL D + +TTL+ G G M A ++
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 427 KRMVEEGIELDAVAFTMEEVAMQKE 451
M+ GI D+ F + A +KE
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKE 521
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 138/276 (50%), Gaps = 5/276 (1%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
LV+ +I + G D+A++ + + + +++ + A ++ + + E +
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ + P + +F +M+ + K G +++A ++ ++ +R P VV+ +T+I G K+G
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ E + ++ + ++ LI+ LCKE E LF ++ GLVP+ +T+
Sbjct: 389 LHEAIVYFCIEKANDVM-----YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
I G CK G + A K M+ +G+ DL+ Y LI GL G + EAR++ +EM G
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ PD F L+ K+G+M +A ++ M G+
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ +I E G P +++ + G CK G++ A + + + L ++++ TLI G
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
G + E ++ M + I PD F LI KE A+ L +M RRGLV
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV---- 540
Query: 335 TFTTLIDGQC 344
T + D C
Sbjct: 541 --TAVSDADC 548
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 159/294 (54%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + V++F+ +I + +DDA+ + + K ++ + +L+ +
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + +++E P + FN L+ F K G A + D++ KR + P + ++N+
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI+G+C +++ ++ M S+ FPD+ T++ LI G CK R ++ LF EM RG
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV + VT+TTLI G DG D A K F+ M+ G+ PD++TY+ L++GLC G L++A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ + M +K D +TT+++G CK G ++ ++ + +G++ + V +
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +++ + V+++ G +D A + + ++ + ++ + K + +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V ++ L+ C G A + ++ ++K+ P +V+FN LI +
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G E +L M I PD+FT+++LING C R D+A +F+ M + P+
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI G CK +V+ + F+ M +G+ D VTY LI GL GD A+K+ +M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G+ PD +T++ L+DG C +G +E ALE+ M + I+LD +T
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 129/216 (59%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V +FN ++ CK + A +F E+ + +RP VV++++LIS C G + +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M ++I P++ TF+ALI+ KE + EA L D+M +R + P+ T+ +LI+G C
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++D A + F+ M+ + PDL TYN LI G CK +++ +L EM+ RGL D +T+T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
TL+ G DGD ++A ++ K+MV +G+ D + +++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 150/285 (52%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++T + +V+ + LIS G DA Q + + +K + L L+ +K
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + + ++++ P ++ +N L++GFC + A+ +F+ + + P + ++NT
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI G+CKS VE+G L M + D T++ LI GL + D A +F +M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ +T++ L+DG C +GK++ AL+ F M I+ D+ Y +I G+CK G + +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
L ++ +G+KP+ +T+ T++ G C ++ A + K+M E+G
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 2/313 (0%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
CF R+ S + + + + S++ L++ Y + DAV + + +
Sbjct: 54 CF--CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 111
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ L+ + + +++ G P + + V+++G CK GDI A
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+ +++ K+ VV FNT+I CK +V++ L ME++ I P+V T+S+LI+ LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
R +A+ L +M + + PN VTF LID K+GK A K M+ + I PD+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYN+LING C L +A+++ M ++ PD T+ TL+ G CK +E E+ + M
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 430 VEEGIELDAVAFT 442
G+ D V +T
Sbjct: 352 SHRGLVGDTVTYT 364
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 120/229 (52%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +N+L++ FC+ I A + ++ K P++V+ ++L++GYC + +
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD TF+ LI+GL +++ EA L D M +RG PN VT+ +++G
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G +DLA M I D+V +N +I+ LCK + +A L EM +G++P+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+T+++L+ C G A ++ M+E+ I + V F A KE
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P ++ FN L+ K+ + +++ + + + ++N LI+ +C+ + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G M P + T S+L+NG C R +A L D+M G P+ +TFTTLI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K A+ M+ +G +P+LVTY ++NGLCK GD+ A LLN+M A ++ D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
F T++D CK ++ AL + K M +GI + V ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++ LI+ + +D A Q + K+ L L++ K K E +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G + L+ G GD +A+ VF ++ + P +++++ L+ G C +G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E+ + M+ I D++ ++ +I G+CK + D+ LF + +G+ PN VT+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I G C + A + M + G PD TYN LI + GD + +L+ EM +
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M R P +F F+ L++ + K + D L ++M R G+ N T+ LI+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ LAL M+ G P +VT ++L+NG C + +A L+++M G +PD ITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
L+ G A+ + RMV+ G + + V +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
+P+ F L+ K K DL + + M GI +L TYN LIN C+ + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
LL +M G +P +T ++L++G C + A+ + +MVE G D + FT
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/160 (18%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ + +L+ ++G ++ A++ ++K +++ + ++ M K W+ +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P V +N ++ G C ++ A + ++ + P ++NTLI + + G
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
+ L M S R D T L+ + + R D++
Sbjct: 515 DKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 553
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 153/288 (53%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ V++++ +I MDDA+ + K ++ + +L+ + +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+++E P V F+ L+ F K G + A ++DE+ KR + P + ++++LI+G+C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++E + +M S+ FP+V T+S LI G CK R +E LF EM +RGLV N V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+TTLI G + D A F+ M+ G+ P+++TYN L++GLCK G L +A + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++PD T+ +++G CK G +E E+ + +G+ + +A+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 138 HGSASSLFASFLQTMP--TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA 195
H AS A Q + Q ++ + +++ G +D A+ ++ + K ++ +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
++ + K K + + E+ G P V+ ++ L+ C G A + ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
+RK+ P VV+F+ LI + K G + E +L M I PD+FT+S+LING C R D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
EA H+F+ M + PN VT++TLI G CK +V+ ++ F+ M +G+ + VTY LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+G + D A+ + +M + G+ P+ +T+ L+DG CK+G + A+ + + + +E
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 436 LDAVAFTM 443
D + +
Sbjct: 501 PDIYTYNI 508
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 124/229 (54%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++ ++ FC+ + A V ++ K P +V+ ++L++GYC S + +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD FTF+ LI+GL +++ EA L D+M +RG P+ VT+ T+++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G +DLAL + M I D+V YN +I+GLCK + +A L EM+ +G++PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
T+++L+ C G A + M+E I + V F+ A KE
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 147/289 (50%), Gaps = 4/289 (1%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+QT+ + + + I+ + + A+ + + K + + +LL K
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ +++E GY P + F L+HG A + D++ +R +P +V++ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+++G CK G+++ L ME +I DV ++ +I+GLCK D+A +LF EM +G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ T+++LI C G+ A + M+++ I P++VT++ALI+ K G L EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
KL +EM R + PD T+++L++G C M L+ K M E I D
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFC----MHDRLDEAKHMFELMISKD 393
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDD 176
RP SL+ L + AS L + ++ +V+ F LI A+ G + +
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVE 346
Query: 177 AVQCIRLVRKKNLQIPLRACENLLR-YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + + K+++ + +L+ + M + F L I + +P V ++ L+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYSTLI 405
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
GFCK + +F E+ +R L V++ TLI G+ ++ + + + M S +
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P++ T++ L++GLCK + +A +F+ + R + P+ T+ +I+G CK GKV+ +
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F + +G+ P+++ YN +I+G C+ G +EA LL +M G P+ T+ TL+ +
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 416 DGDMESALEIKKRMVEEGIELDA 438
DGD E++ E+ K M G DA
Sbjct: 586 DGDREASAELIKEMRSCGFAGDA 608
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + FN L+ K+ + +++ + + +++ I+ +C+ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M PD+ T S+L+NG C R +A L D+M G P+ TFTTLI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K A+ M+ +G +PDLVTY ++NGLCK GD+ A LL +M ++ D +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ T++DG CK M+ AL + M +GI D ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F ++ K + P++V FN L+S K E L M++ I D++T+S IN C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A + +M + G P+ VT ++L++G C ++ A+ M++ G +PD
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+ LI+GL EA L+++M RG +PD +T+ T+++G CK GD++ AL + K+M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 430 VEEGIELDAVAFT 442
+ IE D V +
Sbjct: 250 EKGKIEADVVIYN 262
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ + LI+ + +D+A L+ K+ + L++ K K E +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G + L+HGF + D +A++VF ++ + P ++++N L+ G CK+G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + + ++ + PD++T++ +I G+CK + ++ LF + +G+ PN + +
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+I G C+ G + A + M + G P+ TYN LI + GD + + +L+ EM +
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 398 GLKPDKITFTTLMDGCCKDGDMESAL 423
G D T L+ DG ++ +
Sbjct: 603 GFAGDASTI-GLVTNMLHDGRLDKSF 627
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G PP V F L C SA + EI + +L + V++
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII--------------KVDDA 67
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L G M R FP + F+ L++ + K ++ + L ++M G+ + T++ I+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+ ++ LAL M+ G PD+VT ++L+NG C + +A L+++M G KPD
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
TFTTL+ G A+ + +MV+ G + D V +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
PTV SF L C SG E F E L N L + D+A L
Sbjct: 25 PTVPSFFNL----CGSGCWERSFASASGDYRE----------ILRNRLSDIIKVDDAVDL 70
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M + P+ V F L+ K K +L + + M GI DL TY+ IN C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
L A +L +M G +PD +T ++L++G C + A+ + +MVE G + D
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 441 FT 442
FT
Sbjct: 191 FT 192
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
++L +++L+ +G + A+ +++ ++ + ++ M K WE +
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ G P V +N ++ GFC+ G A + ++ + P ++NTLI +
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
G+ E L M S D T L+ + + R D++
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 157/294 (53%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + +V+++ +I + DDA+ + K ++ + +L+ + +
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ +++E P V FN L+ F K G + A ++DE+ KR + P + ++++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI+G+C ++E + +M S+ FP+V T++ LING CK R DE LF EM +RG
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV N VT+TTLI G + D A F+ M+ G+ P+++TYN L++GLCK G L++A
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ + ++P T+ +++G CK G +E ++ + +G++ D + +
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 143/271 (52%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +++ + V+++ G +D A + + ++ + ++ + K + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V ++ L+ C A + ++ +RK+ P VV+FN LI +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + E +L M I PD+FT+S+LING C R DEA H+F+ M + PN V
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI+G CK ++D ++ F+ M +G+ + VTY LI+G + D A+ + +M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ G+ P+ +T+ TL+DG CK+G +E A+ +
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 1/293 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A +LF ++ + +V+ + LIS + DA + + + ++ + + L+
Sbjct: 279 ALNLFTE-MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+K + + Y E+++ P ++ ++ L++GFC + A+ +F+ + +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV++NTLI+G+CK+ ++EG L M + + T++ LI+G + D A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M G+ PN +T+ TL+DG CK+GK++ A+ F+ + + P + TYN +I G+CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G +++ L ++ +G+KPD I + T++ G C+ G E A + ++M E+G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 157/313 (50%), Gaps = 2/313 (0%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
CF R+ S + + + + S++ L++ Y + DAV + + +
Sbjct: 129 CF--CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ L+ + + +++ G P + + V+++G CK GDI A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+ +++ K+ VV ++T+I CK + ++ L ME++ + P+V T+S+LI+ LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
R +A+ L +M R + PN VTF LID K+GK+ A K + M+ + I PD+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TY++LING C L EA+ + M ++ P+ +T+ TL++G CK ++ +E+ + M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 430 VEEGIELDAVAFT 442
+ G+ + V +T
Sbjct: 427 SQRGLVGNTVTYT 439
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +N+L++ FC+ I A + ++ K P++V+ ++L++GYC + +
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD TF+ LI+GL +++ EA L D M +RG PN VT+ +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G +DLA M I ++V Y+ +I+ LCK +A L EM +G++P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
IT+++L+ C A + M+E I + V F A KE
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 146/290 (50%), Gaps = 3/290 (1%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDD 176
RP SL+ L + + AS L + ++ +V+ F+ LI A+ G + +
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVE 348
Query: 177 AVQCIRLVRKKNLQIPLRACENLLR-YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + + K+++ + +L+ + M + F L I + +P V +N L+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLI 407
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+GFCK I +F E+ +R L V++ TLI G+ ++ + + + M S+ +
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P++ T++ L++GLCK + ++A +F+ + R + P T+ +I+G CK GKV+
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
F + +G++PD++ YN +I+G C+ G +EA L +M G PD T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P ++ FN L+ K+ + +++ + + + ++N LI+ +C+ + L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G M P + T S+L+NG C R +A L D+M G P+ +TFTTLI G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K A+ M+ +G +P+LVTY ++NGLCK GD+ A LLN+M A ++ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++T++D CK + AL + M +G+ + + ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 102/193 (52%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F + K + P++ FN L+S K + L M+ I +++T++ LIN C
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A L +M + G P+ VT ++L++G C ++ A+ M++ G RPD +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+ LI+GL EA L++ M RG +P+ +T+ +++G CK GD++ A + +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 430 VEEGIELDAVAFT 442
IE + V ++
Sbjct: 252 EAAKIEANVVIYS 264
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
S +++ L G M R P +F F+ L++ + K + D L ++M R G+ N T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ LI+ C+ ++ LAL M+ G P +VT ++L+NG C + +A L+++M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G +PD ITFTTL+ G A+ + RMV+ G + + V +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L NGL + D+A LF M + +P+ F L+ K K DL + + M G
Sbjct: 57 LRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
I +L TYN LIN C+ + A LL +M G +P +T ++L++G C + A+
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 424 EIKKRMVEEGIELDAVAFT 442
+ +MVE G D + FT
Sbjct: 176 ALVDQMVEMGYRPDTITFT 194
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 125/217 (57%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E G P V ++ ++ CK G + A +FD++ +RP VV + +L++G C SG
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ L M +I PDV TF+ALI+ KE + +A L++EM R + PN T+T
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+LI+G C +G VD A + F +M +G PD+V Y +LING CK + +A K+ EM+ +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
GL + IT+TTL+ G + G A E+ MV G+
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 156/302 (51%), Gaps = 1/302 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF +++ P S++ F L++ D + ++ + L C L+
Sbjct: 56 ALDLFTHMVESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ P + F ++++ G+ P + F L++GFC + A + +++ + ++
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV + T+I CK+G+V L ME+ I PDV +++L+NGLC R +A+ L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
M +R + P+ +TF LID K+GK A + + M+ I P++ TY +LING C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G + EAR++ M +G PD + +T+L++G CK ++ A++I M ++G+ + +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 441 FT 442
+T
Sbjct: 355 YT 356
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 160/311 (51%), Gaps = 4/311 (1%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
CF S + + ++S F + + + ++ F LI+ + M++A+ + + + +
Sbjct: 116 CFCQSSQPYLASS--FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ + ++ + K + + ++ G P V ++ L++G C G R A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+ + KRK++P V++FN LI + K G + L M I P++FT+++LING C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
E DEA +F M +G P+ V +T+LI+G CK KVD A+K F M +G+ + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TY LI G +VG A+++ + M +RG+ P+ T+ L+ C +G ++ AL I + M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 430 VEEGIELDAVA 440
+ E+D VA
Sbjct: 414 QKR--EMDGVA 422
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 135 RKGH-GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPL 193
+ GH A SLF ++ + V+++ L++ +SG DA +R + K+ ++ +
Sbjct: 189 KNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE 253
L+ +K + E Y E++ P ++ + L++GFC G + AR +F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
+ + P VV++ +LI+G+CK V++ ++ M + + + T++ LI G + +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ---GIRPDLVT 370
+ A +F M RG+ PN T+ L+ C +GKV AL F+ M + G+ P++ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
YN L++GLC G L++A + +M R + IT+T ++ G CK G +++A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 431 EEGIELDAVAFT 442
+G++ + V +T
Sbjct: 488 SKGVKPNVVTYT 499
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F + + + P+++ F L++ K + L ++ + D++T + L+N C
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A+ +M + G P+ VTFT+LI+G C +++ A+ M++ GI+PD+V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
Y +I+ LCK G + A L ++M G++PD + +T+L++G C G A + + M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 430 VEEGIELDAVAFTMEEVAMQKE 451
+ I+ D + F A KE
Sbjct: 239 TKRKIKPDVITFNALIDAFVKE 260
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 129/251 (51%), Gaps = 3/251 (1%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
M ++ + LI+ + G +D+A Q L+ K + A +L+ K K
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + + E+ + G + L+ GF +VG A+ VF + R + P + ++N L+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 272 GYCKSGNVEEGFRLKGVM---ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
C +G V++ + M E + + P+++T++ L++GLC + ++A +F++M +R
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ +T+T +I G CK GKV A+ F + +G++P++VTY +I+GL + G EA
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 389 KLLNEMNARGL 399
L +M G+
Sbjct: 516 VLFRKMKEDGV 526
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L NGL + +EA LF M +P+ + FT L++ K K D+ + + G
Sbjct: 44 LRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ DL T N L+N C+ A L +M G +PD +TFT+L++G C ME A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 424 EIKKRMVEEGIELDAVAFT 442
+ +MVE GI+ D V +T
Sbjct: 163 SMVNQMVEMGIKPDVVMYT 181
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 158/303 (52%), Gaps = 1/303 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A SLF ++ + V+ + LI + G DD + +R + +N+ + L+
Sbjct: 264 ALSLFNE-MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+K + E Y E++ G P +N L+ GFCK + A +FD + +
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P +V+++ LI+ YCK+ V++G RL + S+ + P+ T++ L+ G C+ + + A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F EM RG+ P+ VT+ L+DG C +G+++ AL+ F+ M + + YN +I+G+C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+ +A L ++ +G+KPD +T+ ++ G CK G + A + ++M E+G D
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 441 FTM 443
+ +
Sbjct: 563 YNI 565
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 138/243 (56%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+L + K + + + ++ E V +++++ CK G A +F+E+ +
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
++ VV++++LI G C G ++G ++ M I PDV TFSALI+ KE + EA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
L++EM RG+ P+ +T+ +LIDG CK+ + A + F +M+ +G PD+VTY+ LIN
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
CK + + +L E++++GL P+ IT+ TL+ G C+ G + +A E+ + MV G+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 439 VAF 441
V +
Sbjct: 456 VTY 458
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 138/269 (51%), Gaps = 42/269 (15%)
Query: 210 GPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
G +W+ GY P F+ L++GFC G + A + D + + K RP +V+ +TL
Sbjct: 129 GRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 270 ISGYCKSGNVEE-----------GFRLKGV------------------------MESERI 294
I+G C G V E GF+ V ME I
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
V +S +I+ LCK+ D+A LF+EM +G+ + VT+++LI G C DGK D K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
+ M+ + I PD+VT++ALI+ K G L EA++L NEM RG+ PD IT+ +L+DG C
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFTM 443
K+ + A ++ MV +G E D V +++
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 151/278 (54%), Gaps = 4/278 (1%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCI-RLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFY 216
+ F L++ + G + +AV + R+V K Q P L L+ + +
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMK--QRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++E G+ P + +++ CK G+ A +F ++ +R ++ +VV ++ +I CK
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G+ ++ L ME + I DV T+S+LI GLC + + D+ + EM R ++P+ VTF
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ LID K+GK+ A + + M+ +GI PD +TYN+LI+G CK L EA ++ + M +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+G +PD +T++ L++ CK ++ + + + + +G+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 116/220 (52%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y ++++ +C+ + A V K P ++F+TL++G+C G V E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M + PD+ T S LINGLC + R EA L D M G P+ VT+ +++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G LAL F+ M ++ I+ +V Y+ +I+ LCK G +A L NEM +G+K D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+T+++L+ G C DG + ++ + M+ I D V F+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ ++ LI + + +A Q L+ K + + L+ K K + E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I G P +N L+ GFC+ G + +A+ +F E+ R + P+VV++ L+ G C +G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ + + M+ R+ + ++ +I+G+C S+ D+A LF + +G+ P+ VT+
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G CK G + A F+ M + G PD TYN LI L + +L+ EM G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 399 LKPDKITFTTLMD 411
D T ++D
Sbjct: 591 FSADSSTIKMVID 603
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 128/254 (50%), Gaps = 10/254 (3%)
Query: 191 IPL-RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
IPL R N + + K G S Y I E K L N ++ KV D A
Sbjct: 6 IPLNRKASNFTQILEK----GTSLLHYSSITEAKLSYKERLRNGIVD--IKVND---AID 56
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F+ + + + PT + FN L S ++ + ME I D++T + +IN C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
++ + A + + G P+ +TF+TL++G C +G+V A+ M++ RPDLV
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T + LINGLC G + EA L++ M G +PD++T+ +++ CK G+ AL++ ++M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 430 VEEGIELDAVAFTM 443
E I+ V +++
Sbjct: 237 EERNIKASVVQYSI 250
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFY 216
++ + +LI++Y + +DD ++ R + K L IP N L+ + + E +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGL-IPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++ G PP V + +L+ G C G++ A +F+++ K ++ + +N +I G C +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
V++ + L + + + PDV T++ +I GLCK+ EA+ LF +M G P+ T+
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 337 TTLI 340
LI
Sbjct: 564 NILI 567
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 156/286 (54%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+++ LI + + DA++ ++ ++++ + + +L+ + K K + F
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+E++E G P + + + G+ + + SA E+ + + P V LI+ YCK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V E M + I D T++ L+NGL K + D+A +F EM +G+ P+ ++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI+G K G + A F M+++G+ P+++ YN L+ G C+ G++++A++LL+EM+
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+GL P+ +T+ T++DG CK GD+ A + M +G+ D+ +T
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 158/295 (53%), Gaps = 5/295 (1%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ VL++ + +DDA + R +R K + + + L+ K+ + + E++
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G P V ++N+L+ GFC+ G+I A+ + DE+ + L P V++ T+I GYCKSG++
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E FRL M+ + + PD F ++ L++G C+ + + A +F ++G + F LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773
Query: 341 DGQCKDGKVDLALKKFQIMLDQGI----RPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ K GK +L + ++D +P+ VTYN +I+ LCK G+L+ A++L ++M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
L P IT+T+L++G K G + + GIE D + +++ A KE
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 141/319 (44%), Gaps = 35/319 (10%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++D I + G M+ A + L +A +L+ + K +E +E+
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ Y + ++ G C GD+ A + E+ RP VV + TLI + ++
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF--- 336
+ R+ M+ + I PD+F +++LI GL K R DEA EM GL PN T+
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 337 --------------------------------TTLIDGQCKDGKVDLALKKFQIMLDQGI 364
T LI+ CK GKV A ++ M+DQGI
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
D TY L+NGL K + +A ++ EM +G+ PD ++ L++G K G+M+ A
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 425 IKKRMVEEGIELDAVAFTM 443
I MVEEG+ + + + M
Sbjct: 649 IFDEMVEEGLTPNVIIYNM 667
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 39/355 (10%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
+SL+ L K A S ++ + + + IS Y ++ A + ++ +R
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
+ + C L+ K + Y +++ G + VLM+G K +
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
A +F E+ + + P V S+ LI+G+ K GN+++ + M E + P+V ++ L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
G C+ ++A L DEM +GL PN VT+ T+IDG CK G + A + F M +G+
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 366 PDLVTYNALINGLCKVGDLKEA-------------------------------------- 387
PD Y L++G C++ D++ A
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+L++ R KP+ +T+ ++D CK+G++E+A E+ +M + + +T
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+DVLI ++DA + + + + L+ ++K + + E++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G K Y+++ + K G + A+ +FD + L P ++ +LI GYC+ NV
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+G+ L M+ I +T+ ++ G+C D A ++ EM G PN V +TTLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
++ + A++ + M +QGI PD+ YN+LI GL K + EAR L EM GLK
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
P+ T+ + G + + SA + K M E G+
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P Y ++VL+ G CK+ + A+ + E+ + +++ LI G K N +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M S I + + I + KE ++A LFD M GL+P + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C++ V + M + I TY ++ G+C GDL A ++ EM A G +P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
+ +TTL+ ++ A+ + K M E+GI D + + + K
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 49/319 (15%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
++F +L Y G++++AV L L C+ LL +++ W+ Y
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++E V +++L+ C+ G+++ + V + K T+ N
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL--------------N 257
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V+ +LK M + + P +T+ LI+GLCK R ++A L EM G+ + T++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 339 LIDG-----------------------------------QCKDGKVDLALKKFQIMLDQG 363
LIDG K+G ++ A F M+ G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ P Y +LI G C+ ++++ +LL EM R + T+ T++ G C GD++ A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 424 EIKKRMVEEGIELDAVAFT 442
I K M+ G + V +T
Sbjct: 438 NIVKEMIASGCRPNVVIYT 456
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 137/317 (43%), Gaps = 44/317 (13%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
ASS+F ++ T +V+++++L+ + SG ++ A + + + K L ++
Sbjct: 646 ASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD-------- 252
K ++ + E+ G P +++ L+ G C++ D+ A +F
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Query: 253 ----------------------EIPKRKL--------RPTVVSFNTLISGYCKSGNVEEG 282
E+ R + +P V++N +I CK GN+E
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M++ + P V T+++L+NG K R E +FDE G+ P+ + ++ +I+
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 343 QCKDGKVDLALKKFQIM-----LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
K+G AL M +D G + + T AL++G KVG+++ A K++ M
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 398 GLKPDKITFTTLMDGCC 414
PD T L++ C
Sbjct: 945 QYIPDSATVIELINESC 961
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
V F L GY G +EE + + P + L++ L + +R D ++
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDL---------------------ALKKFQIMLDQ 362
M R +V + T+ LI C+ G V L ALK + M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G+ P TY+ LI+GLCK+ L++A+ LL EM++ G+ D T++ L+DG K + ++A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 423 LEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+ MV GI + + M KE
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKE 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D F L +G + +EA +F LVP L+D + ++DL +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDL-----------KEAR----------KLLNEMN 395
+ M+++ + D+ TY+ LI C+ G++ KE R KL M
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+GL P K T+ L+DG CK +E A + M G+ LD +++
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 154/344 (44%), Gaps = 39/344 (11%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P R +++L + ++G + +QT + + L+ + G M +A +
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 181 IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+RL K + LR +L+ + + + ++E Y +L+ P + L+ +L+ G K
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFT 300
G I A + +P + + P +N +I C G +EEG L+ M FPD T
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD---LALKKFQ 357
+ LI +C+ EA +F E+ + G P+ TF LIDG CK G++ L L K +
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 358 I------------------------------------MLDQGIRPDLVTYNALINGLCKV 381
+ D G PD+V+YN LING C+
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
GD+ A KLLN + +GL PD +T+ TL++G + G E A ++
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 1/284 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP-SWEFYLEI 219
F VLISAY G + AV+ +++ + + + +LR MM+ + ++ Y E+
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L+C P +Y F +LM G K G A+ +FD++ R + P V++ LISG C+ G+
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++ +L M++ +PD +AL++G CK R EA L + G V +++L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
IDG + + A + + ML + I+PD++ Y LI GL K G +++A KLL+ M ++G+
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
PD + ++ C G +E ++ M E DA T+
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 7/235 (2%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
W+ E+ G Y F VL+ + K+G A F + + RP V ++N ++
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 273 YCKSGNVEEGFRLKGVMESERI----FPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+ E F L + +E + P+++TF L++GL K+ R+ +A +FD+M RG
Sbjct: 172 MMRE---EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ PN VT+T LI G C+ G D A K F M G PD V +NAL++G CK+G + EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+LL G +++L+DG + A E+ M+++ I+ D + +T+
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 166/390 (42%), Gaps = 84/390 (21%)
Query: 122 FREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ-- 179
R SL+ L + + A L+A+ L+ + ++++ +LI + +G ++DA++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 180 -------------CIRLVRK-----------KNLQIPLRACEN---------LLRYMMKV 206
C V K ++LQ+ + E+ L+ M +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 207 KPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV---------------- 250
+ E + EI + G P V FN L+ G CK G+++ ARL+
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 251 -------FDEIPK--------RKL--------RPTVVSFNTLISGYCKSGNVEEGFRLKG 287
FD + + R L P +VS+N LI+G+C++G+++ +L
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
V++ + + PD T++ LINGL + R +EA LF + + + +L+ C+
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKR 599
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT-- 405
KV +A + L + D T N I K G+ + A + L E++ R D++T
Sbjct: 600 KVLVAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERALRRLIELDTR---KDELTLG 655
Query: 406 -FTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+T + G C+ G AL + + E+ I
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKI 685
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 145/310 (46%), Gaps = 19/310 (6%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDA---VQCIR 182
H++L + R G + + ++ SV F+ LI SG + +A + +
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL---ECGYPPKVYLFNVLMHGFC 239
+ R +L + L N R + G + Y ++ + G P + +NVL++GFC
Sbjct: 471 VGRPASLFLRLSHSGN--RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFC 528
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
+ GDI A + + + + L P V++NTLI+G + G EE F+L + R P V
Sbjct: 529 RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV- 587
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC-KDGKVDLALKKFQI 358
+ +L+ C++ + A +L+ + ++ + T + QC K+G+ + AL++
Sbjct: 588 -YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI--EQCFKEGETERALRR--- 641
Query: 359 MLDQGIRPDLVT---YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+++ R D +T Y + GLC+ G EA + + + + + + L+ G CK
Sbjct: 642 LIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCK 701
Query: 416 DGDMESALEI 425
+++A+E+
Sbjct: 702 REQLDAAIEV 711
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
F +I+ L +++ D +E+ G+ + F LI K G + A++ F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 361 DQGIRPDLVTYNA------------------------------------LINGLCKVGDL 384
+ RPD+ TYN L++GL K G
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+A+K+ ++M RG+ P+++T+T L+ G C+ G + A ++ M G D+VA
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 128/220 (58%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + E L G P V L+N L+ G G I A + +E+ ++ L P V +FN L++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G CK G V + L VM S+ FPD+FTF+ LI+G + + + A + D M G+ P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ T+ +L++G CK K + ++ ++ M+++G P+L T+N L+ LC+ L EA LL
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
EM + + PD +TF TL+DG CK+GD++ A + ++M E
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 124/224 (55%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++E G P V +N L++G CK + A + ++ L P ++NTLI+GYCK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V+ R+ G PD FT+ +LI+GLC E ++ A LF+E +G+ PN + + T
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G G + A + M ++G+ P++ T+N L+NGLCK+G + +A L+ M ++G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
PD TF L+ G ME+ALEI M++ G++ D +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 3/299 (1%)
Query: 148 FLQTMPTQ---QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
L M +Q +V+ + ++ + + F + + + + + L LLR +
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
K + ++++ G P ++ +N+ + G C+ G++ A + + ++ +P V+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++N LI G CK+ +E G M +E + PD +T++ LI G CK A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
G VP+ T+ +LIDG C +G+ + AL F L +GI+P+++ YN LI GL G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
EA +L NEM+ +GL P+ TF L++G CK G + A + K M+ +G D F +
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 35/313 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL--------------------------- 189
+V ++ ++S DSG+ D A + +R + +
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 190 -QIPLRACE-NLLRYMMKVKP------PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
+ + CE N++ Y V +E + ++L G + FN L+ CK
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
GD++ + D++ KR + P + ++N I G C+ G ++ R+ G + + PDV T+
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
+ LI GLCK S+ EA +M GL P+ T+ TLI G CK G V LA + +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
G PD TY +LI+GLC G+ A L NE +G+KP+ I + TL+ G G +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 422 ALEIKKRMVEEGI 434
A ++ M E+G+
Sbjct: 410 AAQLANEMSEKGL 422
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + Y+ + + G P VY F + M FCK +A + + + + VV++ T++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G+ + EG+ L G M + + + TF+ L+ LCK+ E L D++ +RG++P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N T+ I G C+ G++D A++ +++QG +PD++TYN LI GLCK +EA L
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+M GL+PD T+ TL+ G CK G ++ A I V G D +
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 36/319 (11%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V++++ LI ++ G + +A Q + +K L ++ L+ + K+ +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ GY P ++ FN+L+HG+ + +A + D + + P V ++N+L++G CK+
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
E+ M + P++FTF+ L+ LC+ + DEA L +EM + + P+ VTF
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 337 TTLIDGQCKDGKVD------------------------------------LALKKFQIML 360
TLIDG CK+G +D +A K FQ M+
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
D+ + PD TY +++G CK G++ K L EM G P T +++ C + +
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 421 SALEIKKRMVEEGIELDAV 439
A I RMV++G+ +AV
Sbjct: 690 EAAGIIHRMVQKGLVPEAV 708
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ F++LI Y+ M++A++ + ++ + + +LL + K E Y
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++E G P ++ FN+L+ C+ + A + +E+ + + P V+F TLI G+CK+G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 278 NVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+++ + L + + E+ ++ T++ +I+ ++ A LF EM R L P+G T+
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
++DG CK G V+L K M++ G P L T +IN LC + EA +++ M
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 397 RGLKPDKIT 405
+GL P+ +
Sbjct: 701 KGLVPEAVN 709
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%)
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
M + + G ++ A VF+ + PTV S+N ++S SG ++ ++ M I
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
PDV++F+ + CK SR A L + M +G N V + T++ G ++ +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
F ML G+ L T+N L+ LCK GD+KE KLL+++ RG+ P+ T+ + G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G+++ A+ + ++E+G + D + +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYN 290
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V+ +N +M G A V+ + R + P V SF + +CK+ RL
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M S+ +V + ++ G +E+ E LF +M G+ TF L+ CK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G V K ++ +G+ P+L TYN I GLC+ G+L A +++ + +G KPD IT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ L+ G CK+ + A +MV EG+E D+ +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+++H F + ++ A +F E+ R L P ++ ++ G+CK+GNV G++ M
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
P + T +IN LC E R EA + M ++GLVP V +D K +
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD------KKE 718
Query: 351 LALKKFQIMLDQGIRPDLVTYNA---LINGL 378
+A K ++L+ ++ +TY A L +GL
Sbjct: 719 VAAPK--LVLEDLLKKSCITYYAYELLFDGL 747
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 157/301 (52%), Gaps = 1/301 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
AS L + L P +V+ F LI+ + G MD A +++ ++ ++ L A L+
Sbjct: 270 ASRLLSLVLDCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K G + + + L G V +F+ + + K GD+ +A +V+ + + +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV++ LI G C+ G + E F + G + + P + T+S+LI+G CK L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+++M + G P+ V + L+DG K G + A++ ML Q IR ++V +N+LI+G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+ EA K+ M G+KPD TFTT+M +G +E AL + RM + G+E DA+A
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 441 F 441
+
Sbjct: 569 Y 569
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 46/322 (14%)
Query: 166 SAYTDSGFMDDAVQCI----------RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
S + GF+ DA+ C RLV ++ ++ + +C +L+ + + S
Sbjct: 215 SGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLL 274
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
L +L+CG P V F L++GFCK G++ A +F + +R + P +++++TLI GY K
Sbjct: 275 SL-VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 276 SGNVEEGFRL------KGV-----------------------------MESERIFPDVFT 300
+G + G +L KGV M + I P+V T
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
++ LI GLC++ R EA ++ ++ +RG+ P+ VT+++LIDG CK G + ++ M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
G PD+V Y L++GL K G + A + +M + ++ + + F +L+DG C+ +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
AL++ + M GI+ D FT
Sbjct: 514 EALKVFRLMGIYGIKPDVATFT 535
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 132/267 (49%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + ++ + LI Y +G + + K +++ + + + +K
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ Y +L G P V + +L+ G C+ G I A ++ +I KR + P++V++++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI G+CK GN+ GF L M PDV + L++GL K+ A +M +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ N V F +LIDG C+ + D ALK F++M GI+PD+ T+ ++ G L+EA
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCK 415
L M GL+PD + + TL+D CK
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 35/320 (10%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + +LI G + +A + K+ ++ + +L+ K + Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++++ GYPP V ++ VL+ G K G + A ++ + +R VV FN+LI G+C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+E ++ +M I PDV TF+ ++ E R +EA LF M + GL P+ + +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 337 TTLIDGQCKDGKVDLALKKFQIM-----------------------------------LD 361
TLID CK K + L+ F +M ++
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
+ PD+VTYN +I G C + L EA ++ + P+ +T T L+ CK+ DM+
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 422 ALEIKKRMVEEGIELDAVAF 441
A+ + M E+G + +AV +
Sbjct: 690 AIRMFSIMAEKGSKPNAVTY 709
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 155/324 (47%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
PP + +L +S++G + F+ + + +V+VF+ LI + D+A++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
RL+ ++ + ++R + + + + + G P + L+ FC
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K +FD + + K+ + N +I K +E+ + + ++ PD+
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
T++ +I G C R DEA +F+ + PN VT T LI CK+ +D A++ F IM
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
++G +P+ VTY L++ K D++ + KL EM +G+ P ++++ ++DG CK G +
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
+ A I + ++ + D VA+ +
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAI 781
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
NV++H K I A F+ + + K+ P +V++NT+I GYC ++E R+ +++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
P+ T + LI+ LCK + D A +F M +G PN VT+ L+D K ++
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
+ K F+ M ++GI P +V+Y+ +I+GLCK G + EA + ++ L PD + + L+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 412 GCCKDGDMESALEIKKRMVEEGIELD 437
G CK G + A + + M+ G++ D
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 1/263 (0%)
Query: 143 SLFASF-LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLR 201
+LF F + M + L + LI A+ +Q L+++ + + C ++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 202 YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRP 261
+ K + +F+ ++E P + +N ++ G+C + + A +F+ + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 262 TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
V+ LI CK+ +++ R+ +M + P+ T+ L++ K + + LF
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+EM +G+ P+ V+++ +IDG CK G+VD A F +D + PD+V Y LI G CKV
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 382 GDLKEARKLLNEMNARGLKPDKI 404
G L EA L M G+KPD +
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDL 812
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 251 FDEIPKRKLRPTVVSFNTLI--SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGL 308
FD++ + + P+ VS + + + +CK G V + ++ + + + ++ GL
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
+ + + A+ L + G PN VTF TLI+G CK G++D A F++M +GI PDL
Sbjct: 263 SVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
+ Y+ LI+G K G L KL ++ +G+K D + F++ +D K GD+ +A + KR
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 429 MVEEGIELDAVAFTM 443
M+ +GI + V +T+
Sbjct: 382 MLCQGISPNVVTYTI 396
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P +L+H CK D+ A +F + ++ +P V++ L+ + KS ++E F
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+L M+ + I P + ++S +I+GLCK R DEA ++F + L+P+ V + LI G
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
CK G++ A ++ ML G++PD + AL
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDE--------------IPKRKLRPTVVSFNTLISGYCKS 276
F + H + G A VFDE I R L V F L+ C+
Sbjct: 102 FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRY 159
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V++ + + + ++N L R D FD++CR G+ P+GV+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 337 TTLI-DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ D G+V AL ++++++G R +V+ N ++ GL V ++ A +LL+ +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ +TF TL++G CK G+M+ A ++ K M + GIE D +A++
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P + LL + + + SLF L+ + + F LI + + A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLF-RHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
C+ + K + + +L+ V + +I+ GY P V ++N ++ C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
+ G + +A V + K +RP VV++N+LI+ SG R+ M I PDV
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TFSALI+ KE + EA ++EM +R + PN VT+ +LI+G C G +D A K ++
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+ +G P+ VTYN LING CK + + K+L M+ G+ D T+ TL G C+ G
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
+A ++ RMV G+ D F +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNI 399
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 153/295 (51%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V++++ +I + + G ++ A+ ++ ++K ++ + +L+ + G S
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++ G P V F+ L+ + K G + A+ ++E+ +R + P +V++N+LI+G C
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G ++E ++ V+ S+ FP+ T++ LING CK R D+ + M R G+ + T+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TL G C+ GK A K M+ G+ PD+ T+N L++GLC G + +A L ++
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
IT+ ++ G CK +E A + + +G+ D + + + ++++
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y E+++ P + +N L++G C G + A+ V + + + P V++NTLI+GYCK
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+ V++G ++ VM + + D FT++ L G C+ + A + M G+ P+ T
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
F L+DG C GK+ AL + + + ++TYN +I GLCK +++A L +
Sbjct: 397 FNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA 456
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+G+ PD IT+ T+M G + A E+ ++M +E
Sbjct: 457 LKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%)
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M P + FS L+ + K ++ + LF + G+ + +FTTLID C+ +
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ LAL M+ G P +VT+ +L+NG C V EA L++++ G +P+ + + T
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++D C+ G + +AL++ K M + GI D V +
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
++A LF +M +P+ V F+ L+ K K + + F+ + GI DL ++ L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I+ C+ L A L +M G +P +TF +L++G C A+ + ++V G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 435 ELDAVAFT 442
E + V +
Sbjct: 181 EPNVVIYN 188
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 119/211 (56%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ E G P V +N ++ FC G A + + ++++ P +V+F+ LI+ +
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K V E + M IFP T++++I+G CK+ R D+A + D M +G P+ V
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
TF+TLI+G CK +VD ++ F M +GI + VTY LI+G C+VGDL A+ LLNEM
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ G+ PD ITF ++ G C ++ A I
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 125/214 (58%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V + ++ CK G+ +A+ +F E+ ++ + P V+++N +I +C SG + +L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M ++I PD+ TFSALIN KE + EA ++ EM R + P +T+ ++IDG CK
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+VD A + M +G PD+VT++ LING CK + ++ EM+ RG+ + +T+T
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
TL+ G C+ GD+++A ++ M+ G+ D + F
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 36/263 (13%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
L H +A +LF + +VL ++ +I ++ SG DA Q
Sbjct: 20 LCKDGNHINAQNLFTE-MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ------------ 66
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
LLR+M +E P + F+ L++ F K + A ++
Sbjct: 67 -------LLRHM----------------IEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
E+ + + PT +++N++I G+CK V++ R+ M S+ PDV TFS LING CK
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
R D +F EM RRG+V N VT+TTLI G C+ G +D A M+ G+ PD +T+
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 372 NALINGLCKVGDLKEARKLLNEM 394
+ ++ GLC +L++A +L ++
Sbjct: 224 HCMLAGLCSKKELRKAFAILEDL 246
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 105/189 (55%)
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
+ + ++ VV ++ CK GN L M + IFP+V T++ +I+ C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
+A+ L M + + P+ VTF+ LI+ K+ KV A + ++ ML I P +TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+I+G CK + +A+++L+ M ++G PD +TF+TL++G CK +++ +EI M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 434 IELDAVAFT 442
I + V +T
Sbjct: 181 IVANTVTYT 189
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
I+ D+V A+++ LCK G+ A+ L EM+ +G+ P+ +T+ ++D C G A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 424 EIKKRMVEEGIELDAVAFTMEEVAMQKE 451
++ + M+E+ I D V F+ A KE
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKE 93
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 3/246 (1%)
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
N LR M++ ++F ++ G P + L+ GFC++G R A + + +
Sbjct: 107 NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
P V+++N +ISGYCK+G + V++ + PDV T++ ++ LC + +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
+ D M +R P+ +T+T LI+ C+D V A+K M D+G PD+VTYN L+NG
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+CK G L EA K LN+M + G +P+ IT ++ C G A ++ M+ +G
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 438 AVAFTM 443
V F +
Sbjct: 344 VVTFNI 349
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 153/286 (53%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++VL++ G +D+A++ + + Q + +LR M + +
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++L G+ P V FN+L++ C+ G + A + +++P+ +P +S+N L+ G+CK
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ M S +PD+ T++ ++ LCK+ + ++A + +++ +G P +T+
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+IDG K GK A+K M + ++PD +TY++L+ GL + G + EA K +E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
G++P+ +TF ++M G CK + A++ M+ G + + ++T+
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 158/296 (53%)
Query: 147 SFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKV 206
S L M V+ ++ ++ + DSG + A++ + + +++ + L+ +
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 207 KPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
G + + E+ + G P V +NVL++G CK G + A +++P +P V++
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N ++ C +G + +L M + P V TF+ LIN LC++ A + ++M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
G PN +++ L+ G CK+ K+D A++ + M+ +G PD+VTYN ++ LCK G +++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
A ++LN+++++G P IT+ T++DG K G A+++ M + ++ D + ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 155/290 (53%), Gaps = 3/290 (1%)
Query: 148 FLQTMPT---QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
FL MP+ Q +V+ ++++ + +G DA + + + +K + L+ ++
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ G + + ++ + G P +N L+HGFCK + A + + R P +V
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++NT+++ CK G VE+ + + S+ P + T++ +I+GL K ++ +A L DEM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
+ L P+ +T+++L+ G ++GKVD A+K F GIRP+ VT+N+++ GLCK
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
A L M RG KP++ ++T L++G +G + ALE+ + +G+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 115/226 (50%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V +N ++ C G ++ A V D + +R P V+++ LI C+ V +L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M PDV T++ L+NG+CKE R DEA ++M G PN +T ++ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G+ A K ML +G P +VT+N LIN LC+ G L A +L +M G +P+ ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+ L+ G CK+ M+ A+E +RMV G D V + A+ K+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 3/180 (1%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
V N + ++G +EEGF+ M PD+ + LI G C+ ++ +A + +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
+ G VP+ +T+ +I G CK G+++ AL M + PD+VTYN ++ LC G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
LK+A ++L+ M R PD IT+T L++ C+D + A+++ M + G D V + +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ ++ +++A G ++DAV+ + + K L ++ + K G + +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ P ++ L+ G + G + A F E + +RP V+FN+++ G CKS
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
+ M + P+ +++ LI GL E + EA L +E+C +GL+
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 21/323 (6%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDV-----LISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
+AS + +FL ++ LV DV ++ ++ +G ++ A + +R+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD-- 252
L+ +K K + E + +L G P + ++ L+ G CK G + A +F+
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 253 ----EIPKRKL----------RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
++P + RP VV++ L+ G+CKS VEE +L M E P+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+ ALI+GLCK + DEA + EM G T+++LID K + DLA K
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
ML+ P++V Y +I+GLCKVG EA KL+ M +G +P+ +T+T ++DG G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 419 MESALEIKKRMVEEGIELDAVAF 441
+E+ LE+ +RM +G+ + V +
Sbjct: 795 IETCLELLERMGSKGVAPNYVTY 817
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 6/224 (2%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGD------IRSARLVFDEIPKRKLRPTVVS 265
+++ ++++CG+ P ++N+L+ C D + A + E+ + ++
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
++ C +G E+ F + M + PD T+S ++N LC S+ + A LF+EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
R GLV + T+T ++D CK G ++ A K F M + G P++VTY ALI+ K +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
A +L M + G P+ +T++ L+DG CK G +E A +I +RM
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 64/367 (17%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
+LLC +++K G + + + S +F+ L+ AY SG D +L++K
Sbjct: 342 TLLCGCLNKKQLGRCKRVL-NMMMMEGCYPSPKIFNSLVHAYCTSG---DHSYAYKLLKK 397
Query: 187 --KNLQIPLRACENLL-------RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHG 237
K +P N+L + + + + Y E+L G +
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
C G A V E+ + P +++ +++ C + +E F L M+ + D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
V+T++ +++ CK ++A F+EM G PN VT+T LI K KV A + F+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGD---------------------------------- 383
ML +G P++VTY+ALI+G CK G
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 384 -----------------LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
++EARKLL+ M+ G +P++I + L+DG CK G ++ A E+K
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 427 KRMVEEG 433
M E G
Sbjct: 698 TEMSEHG 704
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P +++ L+ G CKVG + A+ V E+ + T+ ++++LI Y K +
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
++ M P+V ++ +I+GLCK ++DEA L M +G PN VT+T +IDG
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
GK++ L+ + M +G+ P+ VTY LI+ CK G L A LL EM
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + L+ + S +++A + + + + + + L+ + KV + E
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ E G+P +Y ++ L+ + KV A V ++ + P VV + +I G CK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E ++L +ME + P+V T++A+I+G + + L + M +G+ PN VT+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LID CK+G +D+A + M Y +I G K + E+ LL+E+
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQ 875
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
P + L+D K +E AL R++EE
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMAL----RLLEE 907
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 219 ILECGYP-PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++E YP PK+ FN L+H +C GD A + ++ K P V +N LI C
Sbjct: 364 MMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 278 N------VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
+ ++ + M + + + S+ LC + ++A + EM +G +P
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ T++ +++ C K++LA F+ M G+ D+ TY +++ CK G +++ARK
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
NEM G P+ +T+T L+ K + A E+ + M+ EG + V ++
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 35/300 (11%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+V+D LI G +D+A + + + L +L+ KVK + + +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+LE P V ++ ++ G CKVG A + + ++ +P VV++ +I G+ G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+E L M S+ + P+ T+ LI+ CK D A++L +EM + + +
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 339 LIDGQCKD-----------GKVDLA--LKKFQIMLDQGIRPDLV---------------- 369
+I+G K+ G+ D A L +++++D I+ +
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 370 ------TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
TYN+LI LC ++ A +L +EM +G+ P+ +F +L+ G ++ + AL
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 9/222 (4%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P +N L+ F K + SA L+ E+ LR + CK G E
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L +E+E PD ++ LI+GLC+ S +EA + M +PN VT++TL+ G
Sbjct: 291 TL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
++ + +M+ +G P +N+L++ C GD A KLL +M G P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 404 ITFTTLMDGCCKDGD------MESALEIKKRMVEEGIELDAV 439
+ + L+ C D D ++ A + M+ G+ L+ +
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 11/290 (3%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
++ LI A+ + +D A R + NL++ + KV W L ++
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV----GKWREALTLV 293
Query: 221 EC-GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
E + P + L+ G C+ A + + P VV+++TL+ G +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
R+ +M E +P F++L++ C A L +M + G +P V + L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 340 IDGQCKDGK------VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
I C D +DLA K + ML G+ + + ++ LC G ++A ++ E
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M +G PD T++ +++ C ME A + + M G+ D +T+
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPG--PSWE 214
+V+++ +I G D+A + ++++ +K Q N++ Y + G E
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ------PNVVTYTAMIDGFGMIGKIE 796
Query: 215 FYLEILE----CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
LE+LE G P + VL+ CK G + A + +E+ + + +I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC--RRG 328
G+ K E L + + P + + LI+ L K R + A L +E+
Sbjct: 857 EGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV T+ +LI+ C KV+ A + F M +G+ P++ ++ +LI GL + + EA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 389 KLLN 392
LL+
Sbjct: 975 LLLD 978
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 11/287 (3%)
Query: 166 SAYTDSGFMDDAVQCI----------RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
S + GF+ DA+ C RLV ++ ++ + +C +L+ + + S
Sbjct: 215 SGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLL 274
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
L +L+CG P V F L++GFCK G++ A +F + +R + P +++++TLI GY K
Sbjct: 275 SL-VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+G + G +L + + DV FS+ I+ K A+ ++ M +G+ PN VT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+T LI G C+DG++ A + +L +G+ P +VTY++LI+G CK G+L+ L +M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G PD + + L+DG K G M A+ +M+ + I L+ V F
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
AS L + L P +V+ F LI+ + G MD A +++ ++ ++ L A L+
Sbjct: 270 ASRLLSLVLDCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K G + + + L G V +F+ + + K GD+ +A +V+ + + +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV++ LI G C+ G + E F + G + + P + T+S+LI+G CK L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+++M + G P+ V + L+DG K G + A++ ML Q IR ++V +N+LI+G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLM------DGCCK 415
+ EA K+ M G+KPD TFTT+M D CK
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
PP + +L +S++G + F+ + + +V+VF+ LI + D+A++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 180 CIRLVRKKNLQIPLRACENLLRYMM------KVKPPGPSWEFYLEILECGYPPKVYLFNV 233
RL+ ++ + ++R + K P + + + + + NV
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
++H K I A F+ + + K+ P +V++NT+I GYC ++E R+ +++
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
P+ T + LI+ LCK + D A +F M +G PN VT+ L+D K ++ +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
K F+ M ++GI P +V+Y+ +I+GLCK G + EA + ++ L PD + + L+ G
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 414 CKDGDMESALEIKKRMVEEGIELD 437
CK G + A + + M+ G++ D
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPD 781
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%)
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMH 236
+Q L+++ + + C ++ + K + +F+ ++E P + +N ++
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 237 GFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFP 296
G+C + + A +F+ + P V+ LI CK+ +++ R+ +M + P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
+ T+ L++ K + + LF+EM +G+ P+ V+++ +IDG CK G+VD A F
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+D + PD+V Y LI G CKVG L EA L M G+KPD +
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 150/313 (47%), Gaps = 8/313 (2%)
Query: 139 GSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
G+ S FA + + M V+++ VL+ + G M A++ + +++++ +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMH------GFCKVGDIRSARLV 250
+L+ ++ + + + + G P V F +M FCK +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
FD + + K+ + N +I K +E+ + + ++ PD+ T++ +I G C
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
R DEA +F+ + PN VT T LI CK+ +D A++ F IM ++G +P+ VT
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
Y L++ K D++ + KL EM +G+ P ++++ ++DG CK G ++ A I + +
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 431 EEGIELDAVAFTM 443
+ + D VA+ +
Sbjct: 740 DAKLLPDVVAYAI 752
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 251 FDEIPKRKLRPTVVSFNTLI--SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGL 308
FD++ + + P+ VS + + + +CK G V + ++ + + + ++ GL
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
+ + + A+ L + G PN VTF TLI+G CK G++D A F++M +GI PDL
Sbjct: 263 SVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
+ Y+ LI+G K G L KL ++ +G+K D + F++ +D K GD+ +A + KR
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 429 MVEEGIELDAVAFTM 443
M+ +GI + V +T+
Sbjct: 382 MLCQGISPNVVTYTI 396
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P +L+H CK D+ A +F + ++ +P V++ L+ + KS ++E F
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+L M+ + I P + ++S +I+GLCK R DEA ++F + L+P+ V + LI G
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
CK G++ A ++ ML G++PD + AL
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDE--------------IPKRKLRPTVVSFNTLISGYCKS 276
F + H + G A VFDE I R L V F L+ C+
Sbjct: 102 FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRY 159
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V++ + + + ++N L R D FD++CR G+ P+GV+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 337 TTLI-DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ D G+V AL ++++++G R +V+ N ++ GL V ++ A +LL+ +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ +TF TL++G CK G+M+ A ++ K M + GIE D +A++
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 1/283 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++LI G + A++ + ++ + + L++ K + E + ++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 221 ECGY-PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
P V + ++ G+CK G +R A + D++ + + PT V+FN L+ GY K+G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++G M S FPDV TF++LI+G C+ + + L++EM RG+ PN T++ L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ C + ++ A + + + I P YN +I+G CK G + EA ++ EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
KPDKITFT L+ G C G M A+ I +MV G D + +
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 141/271 (52%), Gaps = 1/271 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFY 216
++ ++ LI + S ++ A + + V+ ++ P + +++ K +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++L G P FNVL+ G+ K G++ +A + ++ P VV+F +LI GYC+
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V +GFRL M + +FP+ FT+S LIN LC E+R +A L ++ + ++P +
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+IDG CK GKV+ A + M + +PD +T+ LI G C G + EA + ++M A
Sbjct: 421 NPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
G PDKIT ++L+ K G + A + +
Sbjct: 481 IGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 14/324 (4%)
Query: 128 LLCFLVSRKGH-GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
LL FLVS G A LQ+ + +V + L++ ++DA++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF----- 194
Query: 187 KNLQIPLRACEN------LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+ + ++C + L+R + V + E + G P + +N L+ GFCK
Sbjct: 195 -DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 241 VGDIRSARLVFDEIPKRKL-RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
++ A +F ++ + P VV++ ++ISGYCK+G + E L M I+P
Sbjct: 254 SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF+ L++G K A + +M G P+ VTFT+LIDG C+ G+V + ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+G+ P+ TY+ LIN LC L +AR+LL ++ ++ + P + ++DG CK G +
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
A I + M ++ + D + FT+
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTI 457
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 36/264 (13%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
WEF L + + +N+L CK G A +F+ + + P L+S
Sbjct: 90 WEFSRFKLNIRHS--FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 273 YCKSGNVE-------EGFRLKG-----------------VMESERIFP---------DVF 299
+ + G + + F ++G V ++ ++F D
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK 207
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF+ LI GLC ++++A L M G P+ VT+ TLI G CK +++ A + F+ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 360 LDQGI-RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ PD+VTY ++I+G CK G ++EA LL++M G+ P +TF L+DG K G+
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
M +A EI+ +M+ G D V FT
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFT 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 141 ASSLFASFLQ--TMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI----PLR 194
ASSL L+ PT + F+VL+ Y +G M A + +R K + +
Sbjct: 296 ASSLLDDMLRLGIYPTN---VTFNVLVDGYAKAGEMLTAEE----IRGKMISFGCFPDVV 348
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
+L+ +V + + E+ G P + +++L++ C + AR + ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
+ + P +N +I G+CK+G V E + ME ++ PD TF+ LI G C + R
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
EA +F +M G P+ +T ++L+ K G A QI
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 1/283 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++LI G + A++ + ++ + + L++ K + E + ++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 221 ECGY-PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
P V + ++ G+CK G +R A + D++ + + PT V+FN L+ GY K+G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++G M S FPDV TF++LI+G C+ + + L++EM RG+ PN T++ L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ C + ++ A + + + I P YN +I+G CK G + EA ++ EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
KPDKITFT L+ G C G M A+ I +MV G D + +
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 141/271 (52%), Gaps = 1/271 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFY 216
++ ++ LI + S ++ A + + V+ ++ P + +++ K +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++L G P FNVL+ G+ K G++ +A + ++ P VV+F +LI GYC+
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V +GFRL M + +FP+ FT+S LIN LC E+R +A L ++ + ++P +
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+IDG CK GKV+ A + M + +PD +T+ LI G C G + EA + ++M A
Sbjct: 421 NPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
G PDKIT ++L+ K G + A + +
Sbjct: 481 IGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 14/324 (4%)
Query: 128 LLCFLVSRKGH-GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
LL FLVS G A LQ+ + +V + L++ ++DA++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF----- 194
Query: 187 KNLQIPLRACEN------LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+ + ++C + L+R + V + E + G P + +N L+ GFCK
Sbjct: 195 -DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 241 VGDIRSARLVFDEIPKRKL-RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
++ A +F ++ + P VV++ ++ISGYCK+G + E L M I+P
Sbjct: 254 SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF+ L++G K A + +M G P+ VTFT+LIDG C+ G+V + ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+G+ P+ TY+ LIN LC L +AR+LL ++ ++ + P + ++DG CK G +
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
A I + M ++ + D + FT+
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTI 457
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 36/264 (13%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
WEF L + + +N+L CK G A +F+ + + P L+S
Sbjct: 90 WEFSRFKLNIRHS--FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 273 YCKSGNVE-------EGFRLKG-----------------VMESERIFP---------DVF 299
+ + G + + F ++G V ++ ++F D
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK 207
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF+ LI GLC ++++A L M G P+ VT+ TLI G CK +++ A + F+ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 360 LDQGI-RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ PD+VTY ++I+G CK G ++EA LL++M G+ P +TF L+DG K G+
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
M +A EI+ +M+ G D V FT
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFT 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 141 ASSLFASFLQ--TMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI----PLR 194
ASSL L+ PT + F+VL+ Y +G M A + +R K + +
Sbjct: 296 ASSLLDDMLRLGIYPTN---VTFNVLVDGYAKAGEMLTAEE----IRGKMISFGCFPDVV 348
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
+L+ +V + + E+ G P + +++L++ C + AR + ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
+ + P +N +I G+CK+G V E + ME ++ PD TF+ LI G C + R
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
EA +F +M G P+ +T ++L+ K G A QI
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 155/286 (54%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + LI+ YT G + A++ R+++++ ++ L+ ++ +K+K ++ +
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++++ G P V L+N ++ FC +G++ A E+ K + RPT +F +I GY KS
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G++ + +M P V TF+ LINGL ++ + ++A + DEM G+ N T+
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T ++ G G A + F + ++G+ D+ TY AL+ CK G ++ A + EM+A
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
R + + + L+DG + GD+ A ++ ++M +EG++ D +T
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 138/284 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V++++ +ISA+ G MD A+Q ++ ++K + R ++ K S E +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ CG P V+ FN L++G + + A + DE+ + ++ ++ GY G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + F +++E + D+FT+ AL+ CK R A + EM R + N +
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LIDG + G V A Q M +G++PD+ TY + I+ K GD+ A + + EM A
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G+KP+ T+TTL+ G + E AL + M GI+ D +
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 152/353 (43%), Gaps = 35/353 (9%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
+S++ S+ GH A+ + + + + ++ +I A+ + M+ A +R +
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF-------------- 231
++ + P+ ++ V + + ECG+ P V +
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 232 ---------------------NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
+++++GF K+ D +A VF+++ K ++P V+ +N +I
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
S +C GN++ + M+ R P TF +I+G K + +FD M R G V
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
P TF LI+G + +++ A++ M G+ + TY ++ G VGD +A +
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ GL D T+ L+ CCK G M+SAL + K M I ++ + +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 164/402 (40%), Gaps = 74/402 (18%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P R L+ R+G + ++ + ++ LI AY MD+A+ C
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 181 IRLVRKKNLQIPLRACENLLRYMMKV--KPPGPSW------------------------- 213
+R ++++ +++ L ++ K W
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 214 --------EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS 265
E+ E G + +++ +M G+ V D + +VF + + PTVV+
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
+ LI+ Y K G + + + VM+ E + ++ T+S +ING K A +F++M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 326 RRGLVPNGV-----------------------------------TFTTLIDGQCKDGKVD 350
+ G+ P+ + TF +I G K G +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+L+ F +M G P + T+N LINGL + +++A ++L+EM G+ ++ T+T +M
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
G GD A E R+ EG+++D FT E A+ K C
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVD--IFTYE--ALLKAC 704
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%)
Query: 210 GPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
G +W+ + E P F +++ + + GD+ AR F+ + R + PT + +L
Sbjct: 291 GDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
I Y +++E M+ E I + T+S ++ G K ++ A++ FDE R
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
N + +I C+ ++ A + M ++GI + Y+ +++G V D K+
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + G P +T+ L++ K G + ALE+ + M EEG++ + ++M
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 150/283 (53%), Gaps = 3/283 (1%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
VFD L+ A T +G A + I R + + + A N + ++ V W+ Y E+
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
GY V FN++++ FCK + A VF + K + P VVSFN +I G CK+G++
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 280 EEGFRL---KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+L G+M + P+ T++++ING CK R D A + +M + G+ N T+
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+D + G D AL+ M +G+ + V YN+++ L GD++ A +L +MN+
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
+ ++ D+ T ++ G C++G ++ A+E ++++ E+ + D V
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ ++++ ++ G ++ A+ +R + KN+QI ++R + + + EF
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+I E + N LMH F + + A + + + L +SF TLI GY K
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKE 479
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G +E + M ++ +++++NGL K + A + + M + + VT+
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM----EIKDIVTY 535
Query: 337 TTLIDGQCKDGKVDLA---LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
TL++ K G V+ A L K Q D LVT+N +IN LCK G ++A+++L
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQ-DGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKF 594
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
M RG+ PD IT+ TL+ K E +E+ ++ +G+
Sbjct: 595 MVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G ++N +++ GDI A V ++ + ++ + ++ G C++G
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V+E + + +++ D+ + L++ ++ + A+ + M +GL + ++F
Sbjct: 411 YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TLIDG K+GK++ AL+ + M+ +LV YN+++NGL K G A ++N M +
Sbjct: 471 TLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK 530
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
D +T+ TL++ K G++E A +I +M ++ E
Sbjct: 531 ----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ L+ AY +G D+A++ + K L + +++ ++ + ++
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ +++ G C+ G ++ A +I ++KL +V NTL+ + + +
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
++ G M + + D +F LI+G KE + + A ++D M + N V + +++
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR-GL 399
+G K G A + +++ D+VTYN L+N K G+++EA +L++M + G
Sbjct: 509 NGLSKRGMAGAA----EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Query: 400 KP-DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
K +TF +++ CK G E A E+ K MVE G+ D++ +
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITY 607
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 107/207 (51%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P +N +++GFCK G + A + ++ K + ++ L+ Y ++G+ +E R
Sbjct: 288 SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L M S+ + + +++++ L E + A + +M + + + T ++ G C
Sbjct: 348 LCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
++G V A++ + + ++ + D+V +N L++ + L A ++L M +GL D I
Sbjct: 408 RNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAI 467
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVE 431
+F TL+DG K+G +E ALEI M++
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIK 494
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+++ +G++ +AV+ R + +K L + L+ + ++ K + + +L
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G F L+ G+ K G + A ++D + K +V +N++++G K G
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG--VTFTTLI 340
+ ME D+ T++ L+N K +EA+ + +M ++ + VTF +I
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+ CK G + A + + M+++G+ PD +TY LI K ++ +L + + +G+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 401 PDKITFTTLM 410
P + + +++
Sbjct: 637 PHEHIYLSIV 646
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 168/353 (47%), Gaps = 43/353 (12%)
Query: 131 FLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ 190
LV K H L L + + + ++S + S +D A +LVR + +
Sbjct: 48 ILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPE 107
Query: 191 -IPLRACENLL--RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSA 247
P NLL + + + SW Y +++ CG P+ Y FN+L+ C + +A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSW-LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 248 RLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALING 307
R +FDE+P++ +P +F L+ GYCK+G ++G L MES + P+ ++ +++
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 308 LCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM-LDQGI-- 364
C+E R+D++ + ++M GLVP+ VTF + I CK+GKV A + F M LD+ +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 365 -RPDLVTYNALINGLCKVGDLKEARKL--------------------------------- 390
RP+ +TYN ++ G CKVG L++A+ L
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 391 --LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
L +M +G+ P ++ LMDG CK G + A I M G+ DAV +
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 145/279 (51%), Gaps = 4/279 (1%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY-- 216
++++ ++S++ G DD+ + + +R++ L + + + + K + +
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD 277
Query: 217 LEILE-CGYP-PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+E+ E G P P +N+++ GFCKVG + A+ +F+ I + ++ S+N + G
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV 337
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ G E + M + I P +++++ L++GLCK +A + M R G+ P+ V
Sbjct: 338 RHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ L+ G C GKVD A Q M+ P+ T N L++ L K+G + EA +LL +M
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
N +G D +T ++DG C G+++ A+EI K M G
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 23/308 (7%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S+ +++L+ G + DA + L+++ + LL V +
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E++ P Y N+L+H K+G I A + ++ ++ V+ N ++ G C S
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 277 GNVEE------GFRLKGV-----------------MESERIFPDVFTFSALINGLCKESR 313
G +++ G R+ G + PD+ T+S L+NGLCK R
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
EA +LF EM L P+ V + I CK GK+ A + + M +G L TYN+
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LI GL + E L++EM +G+ P+ T+ T + C+ +E A + M+++
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 434 IELDAVAF 441
I + +F
Sbjct: 660 IAPNVFSF 667
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 23/236 (9%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+ + G + G A V ++ + + P++ S+N L+ G CK G + + + G+M+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ PD T+ L++G C + D A L EM R +PN T L+ K G++
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK---------- 400
A + + M ++G D VT N +++GLC G+L +A +++ M G
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 401 -------------PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
PD IT++TL++G CK G A + M+ E ++ D+VA+ +
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 6/286 (2%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFYL 217
F +L+ Y +G D ++ + + + +P + N ++ + S +
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGV-LPNKVIYNTIVSSFCREGRNDDSEKMVE 241
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL----RPTVVSFNTLISGY 273
++ E G P + FN + CK G + A +F ++ + RP +++N ++ G+
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
CK G +E+ L + + +++ + GL + + EA + +M +G+ P+
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
++ L+DG CK G + A +M G+ PD VTY L++G C VG + A+ LL E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
M P+ T L+ K G + A E+ ++M E+G LD V
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 34/250 (13%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + ++ L++G CK G A+ +F E+ KL+P V++N I +CK G + FR+
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
ME + + T+++LI GL +++ E + L DEM +G+ PN T+ T I C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV------------------------ 381
KV+ A M+ + I P++ ++ LI CKV
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 382 ----------GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
G L +A +LL + RG + + L++ CK ++E A I +M++
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 432 EGIELDAVAF 441
G D A
Sbjct: 762 RGYGFDPAAL 771
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
LL + K + + E++ P +N+ +H FCK G I SA V ++ K+
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
++ ++N+LI G + E L M+ + I P++ T++ I LC+ + ++A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI-------------------- 358
+L DEM ++ + PN +F LI+ CK D+A + F+
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709
Query: 359 --------------MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+LD+G Y L+ LCK +L+ A +L++M RG D
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPA 769
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVE 431
++DG K G+ + A +M+E
Sbjct: 770 ALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 2/194 (1%)
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE--RIFPDVFTFSALINGLCKESRSDEA 317
+ + S +++S + KS ++++ F ++ S P V+ ++ L+ KE R +
Sbjct: 72 KTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFV 131
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
+ L+ +M G+ P TF LI C VD A + F M ++G +P+ T+ L+ G
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
CK G + +LLN M + G+ P+K+ + T++ C++G + + ++ ++M EEG+ D
Sbjct: 192 YCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Query: 438 AVAFTMEEVAMQKE 451
V F A+ KE
Sbjct: 252 IVTFNSRISALCKE 265
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E V ++N ++ CK G A+ +F E+ + + P V++++ +I +C+SG
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ +L M +I PDV TFSALIN L KE + EA ++ +M RRG+ P +T+ ++I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
DG CK +++ A + M + PD+VT++ LING CK + ++ EM+ RG+
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ +T+TTL+ G C+ GD+++A ++ M+ G+ + + F
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 129/224 (57%), Gaps = 4/224 (1%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++E G+ P + +++G CK+GD SA + ++ + ++ VV +N +I CK G+
Sbjct: 36 MVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
L M + IFPDV T+S +I+ C+ R +A L +M R + P+ VTF+
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI+ K+GKV A + + ML +GI P +TYN++I+G CK L +A+++L+ M ++
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
PD +TF+TL++G CK +++ +EI M GI + V +T
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 121/214 (56%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + E+ + G P V ++ ++ FC+ G A + ++ +R++ P VV+F+ LI+
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
K G V E + G M IFP T++++I+G CK+ R ++A + D M + P
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ VTF+TLI+G CK +VD ++ F M +GI + VTY LI+G C+VGDL A+ LL
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
N M + G+ P+ ITF +++ C ++ A I
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E P V F+ L++ K G + A ++ ++ +R + PT +++N++I G+CK
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + R+ M S+ PDV TFS LING CK R D +F EM RRG+V N VT+T
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
TLI G C+ G +D A +M+ G+ P+ +T+ +++ LC +L++A +L ++
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 31/214 (14%)
Query: 260 RPTVVSFNTL-------------------------------ISGYCKSGNVEEGFRLKGV 288
RP VV+F TL I+G CK G+ E L
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSK 66
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
ME I V ++A+I+ LCK+ A +LF EM +G+ P+ +T++ +ID C+ G+
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
A + + M+++ I PD+VT++ALIN L K G + EA ++ +M RG+ P IT+ +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++DG CK + A + M + D V F+
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PDV TF+ L+NGLC E R +A L D M G P G T+I+G CK G + AL
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYG----TIINGLCKMGDTESALNL 63
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
M + I+ +V YNA+I+ LCK G A+ L EM+ +G+ PD IT++ ++D C+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
G A ++ + M+E I D V F+ A+ KE
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + +I ++ SG DA Q +R + ++ + + L+ ++K + E Y
Sbjct: 111 VITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++L G P +N ++ GFCK + A+ + D + + P VV+F+TLI+GYCK+
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V+ G + M I + T++ LI+G C+ D A L + M G+ PN +TF
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Query: 338 TLIDGQCKDGKVDLALKKFQIMLD 361
+++ C ++ K F I+ D
Sbjct: 291 SMLASLCSKKELR---KAFAILED 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
M G P+ VTFTTL++G C +G+V AL M+++G +P Y +INGLCK+GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ A LL++M +K + + ++D CKDG A + M ++GI D + ++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 1/289 (0%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q ++ + +I+ G D A+ + + K ++ + ++ + K K +++
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ ++ G P V+ +N L+ C G A + ++ ++ + P +V FN LI +
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 275 KSGNVEEGFRLKGVM-ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
K G + E +L M +S+ FPDV ++ LI G CK R +E +F EM +RGLV N
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+TTLI G + D A F+ M+ G+ PD++TYN L++GLC G+++ A +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M R +K D +T+TT+++ CK G +E ++ + +G++ + V +T
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 151/288 (52%), Gaps = 1/288 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S++ + L++ + + +AV + + + Q L+ + + +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + + +++G CK G+ A + +++ K K+ VV +NT+I G CK
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++++ F L ME++ I PDVFT++ LI+ LC R +A+ L +M + + P+ V F
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 337 TTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
LID K+GK+ A K + M+ + PD+V YN LI G CK ++E ++ EM+
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
RGL + +T+TTL+ G + D ++A + K+MV +G+ D + + +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 153/296 (51%), Gaps = 1/296 (0%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++T + V ++ LIS + G DA + + + +KN+ L L+ +K
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 209 PGPSWEFYLEILECGYP-PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ + Y E+++ + P V +N L+ GFCK + VF E+ +R L V++
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
TLI G+ ++ + + + M S+ + PD+ T++ L++GLC + A +F+ M +R
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
+ + VT+TT+I+ CK GKV+ F + +G++P++VTY +++G C+ G +EA
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
L EM G P+ T+ TL+ +DGD ++ E+ K M G DA F +
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGL 571
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 1/291 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF +++ P S++ F L+SA D + ++ + L +
Sbjct: 59 AIGLFGDMVKSRPFP-SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
Y + + ++++ GY P + N L++GFC I A + D++ + +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P V+F TL+ G + E L M + PD+ T+ A+INGLCK D A +L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
++M + + + V + T+IDG CK +D A F M +GI+PD+ TYN LI+ LC
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
G +A +LL++M + + PD + F L+D K+G + A ++ MV+
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 118/229 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++ ++ FC+ + A + ++ K P++V+ N+L++G+C + E
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD TF+ L++GL + +++ EA L + M +G P+ VT+ +I+G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G+ DLAL M I D+V YN +I+GLCK + +A L N+M +G+KPD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
T+ L+ C G A + M+E+ I D V F A KE
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
ENL R +++ + + ++++ P + F+ L+ K+ + +++
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+ + +++ I+ +C+ + + G M P + T ++L+NG C +R E
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A L D+M G P+ VTFTTL+ G + K A+ + M+ +G +PDLVTY A+IN
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
GLCK G+ A LLN+M ++ D + + T++DG CK M+ A ++ +M +GI+
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 437 DAVAFT 442
D +
Sbjct: 284 DVFTYN 289
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 121/238 (50%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A L+ +++ V+ ++ LI + +++ ++ R + ++ L L+
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ + + + +++ G P + +N+L+ G C G++ +A +VF+ + KR ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
+V++ T+I CK+G VE+G+ L + + + P+V T++ +++G C++ +EA+ L
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
F EM G +PN T+ TLI + +DG + + + M G D T+ + N L
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 124/225 (55%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+EILE P V+ +N L++GFCK+ I A V D + + P V++N +I C
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G ++ ++ + S+ P V T++ LI E DEA L DEM RGL P+ T+
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I G CK+G VD A + + + +G PD+++YN L+ L G +E KL+ +M +
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
P+ +T++ L+ C+DG +E A+ + K M E+G+ DA ++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 142/285 (49%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++++I + G +D A++ + + N Q + L+ M + +
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+L G P ++ +N ++ G CK G + A + + + P V+S+N L+ G
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
EEG +L M SE+ P+V T+S LI LC++ + +EA +L M +GL P+ ++
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI C++G++D+A++ + M+ G PD+V YN ++ LCK G +A ++ ++
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ ++ T+ GD AL + M+ GI+ D + +
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 1/210 (0%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
+ H C+ G+ + + + + ++ P V+ LI G+ N+ + R+ ++E
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
PDVF ++ALING CK +R D+A + D M + P+ VT+ +I C GK+DLAL
Sbjct: 155 Q-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
K +L +P ++TY LI G + EA KL++EM +RGLKPD T+ T++ G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFTM 443
CK+G ++ A E+ + + +G E D +++ +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 138/271 (50%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +V+ + +LI A G +D+A++ + + + L+ + ++R M K ++E
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ G P V +N+L+ G + ++ K P VV+++ LI+ C
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ G +EE L +M+ + + PD +++ LI C+E R D A + M G +P+ V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
+ T++ CK+GK D AL+ F + + G P+ +YN + + L GD A ++ EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ G+ PD+IT+ +++ C++G ++ A E+
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
GY P V L L+ GF + +I A V EI ++ +P V ++N LI+G+CK +++
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
R+ M S+ PD T++ +I LC + D A + +++ P +T+T LI+
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+G VD ALK ML +G++PD+ TYN +I G+CK G + A +++ + +G +PD
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPD 297
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
I++ L+ G E ++ +M E + + V +++
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++ +I G +D A + +R + K + + + LLR ++ +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ P V +++L+ C+ G I A + + ++ L P S++ LI+ +C+ G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD--------------- 322
++ M S+ PD+ ++ ++ LCK ++D+A +F
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 323 --------------------EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
EM G+ P+ +T+ ++I C++G VD A + M
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
P +VTYN ++ G CK +++A +L M G +P++ T+T L++G G A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 423 LEIKKRMVEEGIELDAVA 440
+E+ +V +DA++
Sbjct: 563 MELANDLV----RIDAIS 576
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + +LI+ G +++A+ ++L+++K L + + L+ + + EF
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + +N ++ CK G A +F ++ + P S+NT+ S S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G+ + M S I PD T++++I+ LC+E DEA L +M P+ VT+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
++ G CK +++ A+ + M+ G RP+ TY LI G+ G EA +L N++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR--ACENLLRYMMKVKPPGPSWE 214
S L F LI + + G MD+A++ + ++ KN+ P C ++ K+ P +
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 215 FYLEILECG-YPPKVYLFNVLMHGFCKVGDIRSAR----------LVFD----------- 252
F+ ++ G P + + L+ C++G + R FD
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 253 --------------EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
E+ ++ + VVS++ LI G K GNVEE L G M E + P++
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T++A+I GLCK + +EA LF+ + G+ + + TLIDG C+ G ++ A
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M +GI+P ++TYN +INGLC G + EA ++ ++G+ D IT++TL+D K +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQN 427
Query: 419 MESALEIKKRMVEEGIELDAV 439
+++ LEI++R +E I +D V
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLV 448
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 19/268 (7%)
Query: 172 GFMDDAVQCIRLVRKKNLQIP-----LRACENLLRYMMKVKPPGPSWEFYLEILECGYPP 226
G + A++ ++R+K L + L+ + LR S + YL ++ G
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR----------SLDAYLLVVNAGETT 649
Query: 227 ----KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
V + ++++G CK G + A + R + +++N+LI+G C+ G + E
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
RL +E+ + P T+ LI+ LCKE +A L D M +GLVPN + + +++DG
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G+ + A++ + + PD T +++I G CK GD++EA + E + + D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMV 430
F L+ G C G ME A + + M+
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 5/261 (1%)
Query: 165 ISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGY 224
I Y G + DA+ R + +K + + + L+ + K + ++++ G
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P + + ++ G CK+G + A ++F+ I + + TLI G C+ GN+ F
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
+ G ME I P + T++ +INGLC R EA+ + +G+V + +T++TL+D
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
K +D L+ + L+ I DLV N L+ +G EA L M L PD
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 405 TFTTLMDGCCKDGDMESALEI 425
T+ T++ G CK G +E ALE+
Sbjct: 484 TYATMIKGYCKTGQIEEALEM 504
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 102/179 (56%)
Query: 263 VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
V+ + +I+G CK G + + L +S + + T+++LINGLC++ EA LFD
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
+ GLVP+ VT+ LID CK+G A K M+ +G+ P+++ YN++++G CK+G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
++A ++++ + PD T ++++ G CK GDME AL + ++ I D F
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 5/222 (2%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVF--DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P+ ++ + L+HGF D S L+ D + P+ ++F +LI + + G ++
Sbjct: 95 PRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAI 154
Query: 284 RLKGVMESERI-FP-DVFTFSALINGLCKESRSDEANHLFDEMCRRG-LVPNGVTFTTLI 340
+ +M ++ + +P D F SA+I+G CK + + A F+ G LVPN VT+TTL+
Sbjct: 155 EVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLV 214
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
C+ GKVD + + D+G D V Y+ I+G K G L +A EM +G+
Sbjct: 215 SALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMN 274
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
D ++++ L+DG K+G++E AL + +M++EG+E + + +T
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 41/298 (13%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ V+ + +LI + G +++A+ + + K+ ++ L ++R + K+ ++
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ IL G +L+ L+ G C+ G++ A + ++ +R ++P+++++NT+I+G C
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD------------------- 315
+G V E + S+ + DV T+S L++ K D
Sbjct: 394 MAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLV 448
Query: 316 ----------------EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
EA+ L+ M L P+ T+ T+I G CK G+++ AL+ F +
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
+ V YN +I+ LCK G L A ++L E+ +GL D T TL+ +G
Sbjct: 509 RKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 38/327 (11%)
Query: 137 GHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
+G A +L+ + + M + +I Y +G +++A++ +RK ++ + C
Sbjct: 462 AYGEADALYRA-MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV--C 518
Query: 197 EN-LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
N ++ + K + E +E+ E G ++ L+H G + + +
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI---FP---------------- 296
+ + N I CK G+ E + +M + + FP
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDA 638
Query: 297 ---------------DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
DV ++ +INGLCKE +A +L RG+ N +T+ +LI+
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G C+ G + AL+ F + + G+ P VTY LI+ LCK G +A KLL+ M ++GL P
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKR 428
+ I + +++DG CK G E A+ + R
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVVSR 785
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 141/346 (40%), Gaps = 70/346 (20%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + L+ +Y +D ++ R + + + L C LL+ + + G + Y
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ E P + ++ G+CK G I A +F+E+ K + V +N +I CK G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKG 530
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALI-----NG------------------------- 307
++ + + + ++ D+ T L+ NG
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 308 -----LCKESRSDEANHLFDEMCRRG------------------------LVPNG----- 333
LCK + A ++ M R+G LV N
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 334 -----VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ +T +I+G CK+G + AL +G+ + +TYN+LINGLC+ G L EA
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+L + + GL P ++T+ L+D CK+G A ++ MV +G+
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 144/362 (39%), Gaps = 75/362 (20%)
Query: 133 VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP 192
+ RKG+ + + ++ Q S+L ++ +I+ +G + +A + K +
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGD 411
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+ LL +KV+ E LE P + + N+L+ F +G A ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+P+ L P ++ T+I GYCK+G +EE + + + V ++ +I+ LCK+
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKG 530
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDG------------------------------ 342
D A + E+ +GL + T TL+
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 343 -----QCKDGKVDLALKKFQIMLDQGIRP------------------------------- 366
CK G + A++ + IM +G+
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 367 ---DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
D++ Y +INGLCK G L +A L + +RG+ + IT+ +L++G C+ G + AL
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 424 EI 425
+
Sbjct: 711 RL 712
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 6/272 (2%)
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
K L + + LRY+ +++ +FY ++ +++++ F +
Sbjct: 19 KSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYE 78
Query: 246 SA-RLVFDEIPKRKLRPTVVSFNTLISGYCKS-GNVEEGFR-LKGVMESERIFPDVFTFS 302
A + + I K + P ++LI G+ + + +G L+ + + FP TF
Sbjct: 79 DAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFC 138
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGL-VP-NGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+LI ++ D A + + M + + P + + +I G CK GK +LAL F+ +
Sbjct: 139 SLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAV 198
Query: 361 DQGIR-PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
D G+ P+LVTY L++ LC++G + E R L+ + G + D + ++ + G K G +
Sbjct: 199 DSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL 258
Query: 420 ESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
AL + MVE+G+ D V++++ + KE
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 7/321 (2%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQ-TMPTQQSVLVFDVLISAYTDSGFM 174
L + F A LC L+ +F + T +VFD+L+ Y G +
Sbjct: 123 LVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLV 182
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
++ + R V + + C +LL ++K+ W+ Y + G P Y FN+L
Sbjct: 183 EEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNIL 242
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ FC + R +++ + P +V++NTL+S YC+ G ++E F L +M R+
Sbjct: 243 TNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRV 302
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
PD+ T+++LI GLCK+ R EA+ F M RG+ P+ +++ TLI CK+G + + K
Sbjct: 303 VPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT---LMD 411
ML + PD T ++ G + G L A + E+ R LK D I F L+
Sbjct: 363 LLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL--RRLKVD-IPFEVCDFLIV 419
Query: 412 GCCKDGDMESALEIKKRMVEE 432
C++G +A + R++EE
Sbjct: 420 SLCQEGKPFAAKHLLDRIIEE 440
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
EC + P V F++L+ G+ K+G + VF E+ +VV+ N L++G K +E
Sbjct: 161 ECNWDPVV--FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ +++ VM I P+ +TF+ L N C +S E + ++M G P+ VT+ TL+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
C+ G++ A ++IM + + PDLVTY +LI GLCK G ++EA + + M RG+K
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRM-------------------VEEGIELDAVAF 441
PD +++ TL+ CK+G M+ + ++ M V EG L AV F
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 442 TME 444
+E
Sbjct: 399 VVE 401
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
V F+ L+ GY K G VEEGFR+ + V T + L+NGL K ++ ++
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDG---KVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
MCR G+ PN TF L + C D +VD L+K M ++G PDLVTYN L++ C+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEK---MEEEGFEPDLVTYNTLVSSYCR 283
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G LKEA L M R + PD +T+T+L+ G CKDG + A + RMV+ GI+ D ++
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 441 FTMEEVAMQKE 451
+ A KE
Sbjct: 344 YNTLIYAYCKE 354
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + + L+ G CK G +R A F + R ++P +S+NTLI YCK G +++ +L
Sbjct: 304 PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL 363
Query: 286 KGVMESERIFPDVFTFSALING-----------------------------------LCK 310
M + PD FT ++ G LC+
Sbjct: 364 LHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQ 423
Query: 311 ESRSDEANHLFDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
E + A HL D + G T+ LI+ + ++ AL + +Q D
Sbjct: 424 EGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAK 483
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
TY ALI LC++G +EA L+ EM +KPD L+ G CK+ D + A
Sbjct: 484 TYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR-ACENLLRYMMKVKPPGPSWEFYLEI 219
++ LI AY G M + + + + ++ +P R C+ ++ ++ + F +E+
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLLHEMLGNSV-VPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 220 --LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK---RKLRPTVVSFNTLISGYC 274
L+ P +V F L+ C+ G +A+ + D I + + +P ++N LI
Sbjct: 403 RRLKVDIPFEVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLS 458
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ +EE LKG ++++ D T+ ALI LC+ R+ EA L EM + P+
Sbjct: 459 RCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSF 518
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG-DLKEARKLLNE 393
L+ G CK+ D A + + + D +YN+L+ +C+ G K+A +L
Sbjct: 519 ICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQER 578
Query: 394 MNARGLKPDKITFTTLM 410
M G P+++T L+
Sbjct: 579 MQRLGFVPNRLTCKYLI 595
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 142/274 (51%), Gaps = 5/274 (1%)
Query: 169 TDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKV 228
T GF D V L+ L+ + L YM++ + + +++E G P V
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVV 226
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
FN L++G C G + A + +++ + L VV++ T+++G CK G+ + L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
ME I PDV +SA+I+ LCK+ +A +LF EM +G+ PN T+ +IDG C G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
A + + M+++ I PD++T+NALI+ K G L EA KL +EM R + PD +T+ +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ G CK + A K M + D V F
Sbjct: 407 MIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 41/355 (11%)
Query: 124 EAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRL 183
EA +L ++V G A +LF ++ T V+ F+ LI+ G + +A +
Sbjct: 194 EALALFGYMV-ETGFLEAVALFDQMVEIGLTP-VVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 184 VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD 243
+ K L I + ++ M K+ + ++ E P V +++ ++ CK G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
A+ +F E+ ++ + P V ++N +I G+C G + RL M I PDV TF+A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 304 LIN-----------------------------------GLCKESRSDEANHLFDEMCRRG 328
LI+ G CK +R D+A H+FD M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
P+ VTF T+ID C+ +VD ++ + + +G+ + TYN LI+G C+V +L A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
L EM + G+ PD IT L+ G C++ +E ALE+ + + I+LD VA+ +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 17/294 (5%)
Query: 174 MDDAVQCIR-LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFN 232
+DDA+ +VR + + C ++ +++ P + Y ++ P +Y FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM--- 289
+L+ FC + + F ++ K +P VV+FNTL+ G C + E L G M
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 290 ---ESERIF---------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E+ +F P V TF+ LINGLC E R EA L ++M +GL + VT+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+++G CK G AL M + I+PD+V Y+A+I+ LCK G +A+ L +EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
G+ P+ T+ ++DG C G A + + M+E I D + F A KE
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 32/339 (9%)
Query: 138 HGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
H A LF+ L+ +V ++ +I + G DA + +R + ++ + +
Sbjct: 312 HSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD----- 252
L+ +K + + E+L P +N +++GFCK A+ +FD
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 253 --------------------------EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
EI +R L ++NTLI G+C+ N+ L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
M S + PD T + L+ G C+ + +EA LF+ + + + V + +I G CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
KVD A F + G+ PD+ TYN +I+G C + +A L ++M G +PD T+
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEE 445
TL+ GC K G+++ ++E+ M G DA M E
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAE 649
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
EI G +N L+HGFC+V ++ +A+ +F E+ + P ++ N L+ G+C++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+EE L V++ +I D ++ +I+G+CK S+ DEA LF + G+ P+ T+
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+I G C + A F M D G PD TYN LI G K G++ ++ +L++EM +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 398 GLKPDKITFTTLMDGCCKDGDME 420
G D T + C+ D E
Sbjct: 637 GFSGDAFTIKMAEEIICRVSDEE 659
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ F+ +I Y + +D+ +Q +R + ++ L L+ +V + + +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P N+L++GFC+ + A +F+ I K+ V++N +I G CK
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V+E + L + + PDV T++ +I+G C +S +AN LF +M G P+ T+
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
TLI G K G++D +++ M G D T +C+V D
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 142/274 (51%), Gaps = 5/274 (1%)
Query: 169 TDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKV 228
T GF D V L+ L+ + L YM++ + + +++E G P V
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVV 226
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
FN L++G C G + A + +++ + L VV++ T+++G CK G+ + L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
ME I PDV +SA+I+ LCK+ +A +LF EM +G+ PN T+ +IDG C G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
A + + M+++ I PD++T+NALI+ K G L EA KL +EM R + PD +T+ +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ G CK + A K M + D V F
Sbjct: 407 MIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 41/355 (11%)
Query: 124 EAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRL 183
EA +L ++V G A +LF ++ T V+ F+ LI+ G + +A +
Sbjct: 194 EALALFGYMV-ETGFLEAVALFDQMVEIGLTP-VVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 184 VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD 243
+ K L I + ++ M K+ + ++ E P V +++ ++ CK G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
A+ +F E+ ++ + P V ++N +I G+C G + RL M I PDV TF+A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 304 LIN-----------------------------------GLCKESRSDEANHLFDEMCRRG 328
LI+ G CK +R D+A H+FD M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
P+ VTF T+ID C+ +VD ++ + + +G+ + TYN LI+G C+V +L A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
L EM + G+ PD IT L+ G C++ +E ALE+ + + I+LD VA+ +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 17/294 (5%)
Query: 174 MDDAVQCIR-LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFN 232
+DDA+ +VR + + C ++ +++ P + Y ++ P +Y FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM--- 289
+L+ FC + + F ++ K +P VV+FNTL+ G C + E L G M
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 290 ---ESERIF---------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E+ +F P V TF+ LINGLC E R EA L ++M +GL + VT+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+++G CK G AL M + I+PD+V Y+A+I+ LCK G +A+ L +EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
G+ P+ T+ ++DG C G A + + M+E I D + F A KE
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 15/246 (6%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF---------------DEIPK 256
S + ++ + G+ P V FN L+HG C I A +F D++ +
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
L P V++FNTLI+G C G V E L M + + DV T+ ++NG+CK +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A +L +M + P+ V ++ +ID CKDG A F ML++GI P++ TYN +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
G C G +A++LL +M R + PD +TF L+ K+G + A ++ M+ I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 437 DAVAFT 442
D V +
Sbjct: 400 DTVTYN 405
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 34/341 (9%)
Query: 138 HGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
H A LF+ L+ +V ++ +I + G DA + +R + ++ + +
Sbjct: 312 HSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD----- 252
L+ +K + + E+L P +N +++GFCK A+ +FD
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 253 --------------------------EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
EI +R L ++NTLI G+C+ N+ L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
M S + PD T + L+ G C+ + +EA LF+ + + + V + +I G CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
KVD A F + G+ PD+ TYN +I+G C + +A L ++M G +PD T+
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVA 447
TL+ GC K G+++ ++E+ M G D AFT++ VA
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD--AFTIKMVA 649
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%)
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ K + EI G +N L+HGFC+V ++ +A+ +F E+ + P +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
+ N L+ G+C++ +EE L V++ +I D ++ +I+G+CK S+ DEA LF +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
G+ P+ T+ +I G C + A F M D G PD TYN LI G K G++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMD 411
++ +L++EM + G D T + D
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIKMVAD 650
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 127/218 (58%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
V +FN ++ CK + A +F E+ + +RP VV++N+LI+ C G + RL
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M ++I P+V TF+ALI+ KE + EA L +EM +R + P+ +T+ LI+G C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
++D A + F+ M+ + P++ TYN LING CK +++ +L EM+ RGL + +T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+TT++ G + GD +SA + K+MV + D + +++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 147/285 (51%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ L++ Y S + DAV + + + + L+ + +
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ G P + + +++G CK GDI A + +++ +++ VV FNT+I CK
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+VE L ME++ I P+V T+++LIN LC R +A+ L M + + PN VTF
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LID K+GK+ A K + M+ + I PD +TYN LING C L EA+++ M ++
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P+ T+ TL++G CK +E +E+ + M + G+ + V +T
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 35/256 (13%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +Y +++ ++ FC+ + A V ++ K P +V+ ++L++GYC S + +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD FTF+ LI+GL +++ EA L D+M +RG P+ VT+ T+++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 343 QCKDGKVDLALKK---------------FQIMLD--------------------QGIRPD 367
CK G +DLAL F ++D +GIRP+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
+VTYN+LIN LC G +A +LL+ M + + P+ +TF L+D K+G + A ++ +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 428 RMVEEGIELDAVAFTM 443
M++ I+ D + + +
Sbjct: 353 EMIQRSIDPDTITYNL 368
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 153/311 (49%), Gaps = 3/311 (0%)
Query: 138 HGSASSLFASFLQTMP--TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA 195
H AS A Q + Q ++ + +++ G +D A+ + + ++ +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
++ + K + + + + E+ G P V +N L++ C G A + +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
++K+ P VV+FN LI + K G + E +L M I PD T++ LING C +R D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
EA +F M + +PN T+ TLI+G CK +V+ ++ F+ M +G+ + VTY +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
G + GD A+ + +M + + D +T++ L+ G C G +++AL I K + + +E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 436 LDAVAF-TMEE 445
L+ + TM E
Sbjct: 501 LNIFIYNTMIE 511
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 141/277 (50%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + +V++F+ +I + ++ AV + K ++ + +L+ +
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ +LE P V FN L+ F K G + A + +E+ +R + P +++N
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI+G+C ++E ++ M S+ P++ T++ LING CK R ++ LF EM +RG
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV N VT+TT+I G + G D A F+ M+ + D++TY+ L++GLC G L A
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ + ++ + + T+++G CK G + A ++
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 161/328 (49%), Gaps = 10/328 (3%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP +SL+ L + AS L ++ L+ +V+ F+ LI A+ G + +A
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 179 QCIRLVRKKNLQIPLRACENLL--RYMMKVKPPGPSWEF-YLEILECGYPPKVYLFNVLM 235
+ + ++++ P NLL + M + F ++ +C P + +N L+
Sbjct: 349 KLHEEMIQRSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC--LPNIQTYNTLI 405
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+GFCK + +F E+ +R L V++ T+I G+ ++G+ + + M S R+
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
D+ T+S L++GLC + D A +F + + + N + T+I+G CK GKV A
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA--- 522
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+ + I+PD+VTYN +I+GLC L+EA L +M G P+ T+ TL+ +
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
D D ++ E+ K M G DA ++
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISL 610
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 147/293 (50%), Gaps = 4/293 (1%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF ++T + +V+ ++ LI+ + G DA + + + +K + + L+
Sbjct: 277 AVDLFTE-METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K + + + E+++ P +N+L++GFC + A+ +F + +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P + ++NTLI+G+CK VE+G L M + + T++ +I G + D A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M + + +T++ L+ G C GK+D AL F+ + + ++ YN +I G+CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G + EA L ++ +KPD +T+ T++ G C ++ A ++ ++M E+G
Sbjct: 516 AGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + FN L+ K+ + +++ + + +++ I+ +C+ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M PD+ T S+L+NG C R +A L D+M G P+ TFTTLI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K A+ M+ +G +PDLVTY ++NGLCK GD+ A LLN+M A +K + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
F T++D CK +E A+++ M +GI + V +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F ++ K + P++V FN L+S K E L M++ I D++T+S IN C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S+ A + +M + G P+ VT ++L++G C ++ A+ M++ G +PD
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+ LI+GL EA L+++M RG +PD +T+ T+++G CK GD++ AL + +M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 430 VEEGIELDAVAF 441
I+ + V F
Sbjct: 250 EAARIKANVVIF 261
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
++ ++ LI+ + ++D V+ R + ++ L +++ + + +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++ P + +++L+HG C G + +A ++F + K ++ + +NT+I G CK+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V E + L S I PDV T++ +I+GLC + EA+ LF +M G +PN T+
Sbjct: 517 GKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
TLI +D + + + M G D T + + N L
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G PP V F L C SA + EI + +L + V++
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII--------------KVDDA 67
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L G M R FP + F+ L++ + K ++ + L ++M G+ + T++ I+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+ ++ LAL M+ G PD+VT ++L+NG C + +A L+++M G KPD
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
TFTTL+ G A+ + +MV+ G + D V +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
PTV SF L C SG E F E L N L + D+A L
Sbjct: 25 PTVPSFFNL----CGSGCWERSFASASGDYRE----------ILRNRLSDIIKVDDAVDL 70
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M + P+ V F L+ K K +L + + M GI DL TY+ IN C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
L A +L +M G +PD +T ++L++G C + A+ + +MVE G + D
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 441 FT 442
FT
Sbjct: 191 FT 192
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 149/287 (51%), Gaps = 1/287 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ F+ ++S Y GF+D A V K L + + L+ + V + E
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ + G P +N+L GF +G I A V ++ + L P V+++ L+ G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 277 GNVEEGF-RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
GN++ G LK ++ + S +++GLCK R DEA LF++M GL P+ V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++ +I G CK GK D+AL + M D+ I P+ T+ AL+ GLC+ G L EAR LL+ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G D + + ++DG K G +E ALE+ K ++E GI F
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 142/268 (52%), Gaps = 36/268 (13%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR-PTVVSFNTLI 270
+WE ++L+ G P V + +L+ G C++G+I ++ ++ R +++ + ++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
SG CK+G ++E L M+++ + PD+ +S +I+GLCK + D A L+DEMC + ++
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 331 PNG-----------------------------------VTFTTLIDGQCKDGKVDLALKK 355
PN V + +IDG K G ++ AL+
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F+++++ GI P + T+N+LI G CK ++ EARK+L+ + GL P +++TTLMD
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
G+ +S E+++ M EGI V +++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSV 578
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 154/290 (53%), Gaps = 8/290 (2%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ + LV+D+L+ + +DD++ ++ ++ +NL + ++ ++L + + W+
Sbjct: 121 ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWD 177
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y EI + + ++ ++ G C+ + A L + + P+VVSFN+++SGYC
Sbjct: 178 VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G V+ + + P V++ + LINGLC EA L +M + G+ P+ V
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ L G G + A + + MLD+G+ PD++TY L+ G C++G++ LL +M
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Query: 395 NARGLKPDKIT-FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+RG + + I + ++ G CK G ++ AL + +M +G+ D VA+++
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 48/329 (14%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P R +LL L + A SL S + + T VL ++++I Y SG +++A++
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL-YNIVIDGYAKSGCIEEALE 489
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
++V +E G P V FN L++G+C
Sbjct: 490 LFKVV-----------------------------------IETGITPSVATFNSLIYGYC 514
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K +I AR + D I L P+VVS+ TL+ Y GN + L+ M++E I P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 300 TFSALINGLCKESRSDEANHLFDEM----CRRGLV--------PNGVTFTTLIDGQCKDG 347
T+S + GLC+ + + NH+ E C++GL P+ +T+ T+I C+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+ A +IM + + TYN LI+ LC G +++A + + + + K +T
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIEL 436
TL+ C GD E A+++ +++ G +
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 15/287 (5%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
S++ V++S +G +D+A+ ++ L L A ++ + K+ +
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y E+ + P L+ G C+ G + AR + D + +V +N +I GY K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
SG +EE L V+ I P V TF++LI G CK EA + D + GL P+ V+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD------------ 383
+TTL+D G + + M +GI P VTY+ + GLC+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA---LEIKK 427
++ ++ L +M + G+ PD+IT+ T++ C+ + A LEI K
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI-PLRACENLLRYMMKVKPPGPSWEFY 216
V+ + +L+ G +D + ++ + + ++ + C +L + K + +
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + +++++HG CK+G A ++DE+ +++ P + L+ G C+
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + E L + S D+ ++ +I+G K +EA LF + G+ P+ TF
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+LI G CK + A K ++ G+ P +V+Y L++ G+ K +L EM A
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEI-KKRMVEE 432
G+ P +T++ + G C+ E+ + ++R+ E+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 1/225 (0%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKS 276
E+ E PP Y +N L+ CK D+ DE+ ++P +VSF LI C S
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
N+ E L + + PD F ++ ++ G C S+ EA ++ +M G+ P+ +T+
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI G K G+V+ A + M+D G PD TY +L+NG+C+ G+ A LL EM A
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
RG P+ T+ TL+ G CK M+ +E+ + M G++L++ +
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 6/340 (1%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSL-----FASFLQTMPTQQSVLVFDVLISAYTD 170
L ++P FR S L+S SS+ + + + + D+ + + +
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 171
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE-CGYPPKVY 229
+G +D+A ++ + +K+ LL+++ K K +EF E+ + P +
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
F +L+ C ++R A + ++ +P +NT++ G+C E + M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ E + PD T++ LI GL K R +EA M G P+ T+T+L++G C+ G+
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
AL + M +G P+ TYN L++GLCK + + +L M + G+K + + TL
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQ 449
+ K G + A E+ V+ DA A++ E ++
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLK 451
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 150/300 (50%), Gaps = 10/300 (3%)
Query: 143 SLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY 202
SL S + V +VLI ++ G + A I L+R + + I ++
Sbjct: 114 SLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISG 170
Query: 203 MMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT 262
+ + +++F E+++ G P +N L+ GFCKVG+ A+ + DEI + L
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL--- 227
Query: 263 VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
++ L+S Y +EE +R M PDV TFS++IN LCK + E L
Sbjct: 228 -ITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
EM + PN VT+TTL+D K AL + M+ +GI DLV Y L++GL K G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
DL+EA K + P+ +T+T L+DG CK GD+ SA I +M+E+ + + V ++
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 134/236 (56%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y +++ G P + ++ VLM G K GD+R A F + + P VV++ L+ G C
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K+G++ + M + + P+V T+S++ING K+ +EA L +M + +VPNG
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ T+IDG K GK ++A++ + M G+ + +AL+N L ++G +KE + L+ +M
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
++G+ D+I +T+L+D K GD E+AL + M E G+ D V++ + M K
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 36/271 (13%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+ M+K G W Y + E G P + FN++M+ K GD ++D++
Sbjct: 545 LISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF----------------- 301
++P+++S N ++ C++G +EE + M I P++ T+
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 302 ------------------SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+ LI LCK + +A + +M RG +P+ VTF +L+ G
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
V AL + +M++ GI P++ TYN +I GL G +KE K L+EM +RG++PD
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
T+ L+ G K G+M+ ++ I M+ +G+
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGL 814
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 126/259 (48%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S++ ++++ ++G M++A+ + + + L L K K ++ +
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+L G ++N L+ CK+G + A +V ++ R P V+FN+L+ GY
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+V + VM I P+V T++ +I GL E + EM RG+ P+ T+
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 786
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI GQ K G + ++ + M+ G+ P TYN LI+ VG + +AR+LL EM
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 397 RGLKPDKITFTTLMDGCCK 415
RG+ P+ T+ T++ G CK
Sbjct: 847 RGVSPNTSTYCTMISGLCK 865
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 36/252 (14%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+LE P V + L+ G CK GD+ SA + ++ ++ + P VV+++++I+GY K G
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS---------------DEANHLFD- 322
+EE L ME + + P+ FT+ +I+GL K + +E N++ D
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 323 -------------------EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
+M +G+ + + +T+LID K G + AL + M ++G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ D+V+YN LI+G+ K G + A M +G++PD TF +M+ K GD E L
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 424 EIKKRMVEEGIE 435
++ +M GI+
Sbjct: 594 KLWDKMKSCGIK 605
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G P V +NVL+ G K G + A + + ++ + P + +FN +++ K G+ E
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+L M+S I P + + + ++ LC+ + +EA H+ ++M + PN T+ +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
D K + D K + +L GI+ YN LI LCK+G K+A ++ +M ARG
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
PD +TF +LM G + AL M+E GI + +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATY 751
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 35/264 (13%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS-- 271
E Y +++ G+ P V F+ +++ CK G + L+ E+ + + P V++ TL+
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 272 ---------------------------------GYCKSGNVEEGFRLKGVMESERIFPDV 298
G K+G++ E + ++ + P+V
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T++AL++GLCK A + +M + ++PN VT++++I+G K G ++ A+ +
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M DQ + P+ TY +I+GL K G + A +L EM G++ + L++ + G
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
++ + K MV +G+ LD + +T
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYT 508
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 42/315 (13%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPS---WE 214
V+ ++VLIS G + A + +R+K ++ P A N++ M + G S +
Sbjct: 539 VVSYNVLISGMLKFGKVG-ADWAYKGMREKGIE-PDIATFNIM--MNSQRKQGDSEGILK 594
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF-------- 266
+ ++ CG P + N+++ C+ G + A + +++ ++ P + ++
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 267 ---------------------------NTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
NTLI+ CK G ++ + G ME+ PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF++L++G S +A + M G+ PN T+ T+I G G + K M
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+G+RPD TYNALI+G K+G++K + + EM A GL P T+ L+ G M
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834
Query: 420 ESALEIKKRMVEEGI 434
A E+ K M + G+
Sbjct: 835 LQARELLKEMGKRGV 849
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P FN LMHG+ +R A + + + + P V ++NT+I G +G ++E
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+ M+S + PD FT++ALI+G K + ++ EM GLVP T+ LI
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD------------LKEARKL 390
GK+ A + + M +G+ P+ TY +I+GLCK+ L EA+ L
Sbjct: 828 FANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGL 887
Query: 391 LNEM 394
L EM
Sbjct: 888 LKEM 891
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL-KGVMESERIFPDVFTFSAL 304
SA F +P +L +N+LI + +G V + L M + + PDVF + L
Sbjct: 82 SAMCTFGVVPDSRL------WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVL 135
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I+ CK R A L R + + VT+ T+I G C+ G D A + M+ GI
Sbjct: 136 IHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGI 192
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNE----------------------------MNA 396
PD V+YN LI+G CKVG+ A+ L++E M
Sbjct: 193 LPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVM 252
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G PD +TF+++++ CK G + + + M E + + V +T
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 149/287 (51%), Gaps = 1/287 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ F+ ++S Y GF+D A V K L + + L+ + V + E
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ + G P +N+L GF +G I A V ++ + L P V+++ L+ G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 277 GNVEEGF-RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
GN++ G LK ++ + S +++GLCK R DEA LF++M GL P+ V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++ +I G CK GK D+AL + M D+ I P+ T+ AL+ GLC+ G L EAR LL+ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G D + + ++DG K G +E ALE+ K ++E GI F
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 142/268 (52%), Gaps = 36/268 (13%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR-PTVVSFNTLI 270
+WE ++L+ G P V + +L+ G C++G+I ++ ++ R +++ + ++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
SG CK+G ++E L M+++ + PD+ +S +I+GLCK + D A L+DEMC + ++
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 331 PNG-----------------------------------VTFTTLIDGQCKDGKVDLALKK 355
PN V + +IDG K G ++ AL+
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F+++++ GI P + T+N+LI G CK ++ EARK+L+ + GL P +++TTLMD
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
G+ +S E+++ M EGI V +++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSV 578
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 154/290 (53%), Gaps = 8/290 (2%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ + LV+D+L+ + +DD++ ++ ++ +NL + ++ ++L + + W+
Sbjct: 121 ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWD 177
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y EI + + ++ ++ G C+ + A L + + P+VVSFN+++SGYC
Sbjct: 178 VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G V+ + + P V++ + LINGLC EA L +M + G+ P+ V
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ L G G + A + + MLD+G+ PD++TY L+ G C++G++ LL +M
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Query: 395 NARGLKPDKIT-FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+RG + + I + ++ G CK G ++ AL + +M +G+ D VA+++
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 48/329 (14%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P R +LL L + A SL S + + T VL ++++I Y SG +++A++
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL-YNIVIDGYAKSGCIEEALE 489
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
++V +E G P V FN L++G+C
Sbjct: 490 LFKVV-----------------------------------IETGITPSVATFNSLIYGYC 514
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K +I AR + D I L P+VVS+ TL+ Y GN + L+ M++E I P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 300 TFSALINGLCKESRSDEANHLFDEM----CRRGLV--------PNGVTFTTLIDGQCKDG 347
T+S + GLC+ + + NH+ E C++GL P+ +T+ T+I C+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+ A +IM + + TYN LI+ LC G +++A + + + + K +T
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIEL 436
TL+ C GD E A+++ +++ G +
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 15/287 (5%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
S++ V++S +G +D+A+ ++ L L A ++ + K+ +
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y E+ + P L+ G C+ G + AR + D + +V +N +I GY K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
SG +EE L V+ I P V TF++LI G CK EA + D + GL P+ V+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD------------ 383
+TTL+D G + + M +GI P VTY+ + GLC+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA---LEIKK 427
++ ++ L +M + G+ PD+IT+ T++ C+ + A LEI K
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI-PLRACENLLRYMMKVKPPGPSWEFY 216
V+ + +L+ G +D + ++ + + ++ + C +L + K + +
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P + +++++HG CK+G A ++DE+ +++ P + L+ G C+
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + E L + S D+ ++ +I+G K +EA LF + G+ P+ TF
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+LI G CK + A K ++ G+ P +V+Y L++ G+ K +L EM A
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEI-KKRMVEE 432
G+ P +T++ + G C+ E+ + ++R+ E+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 3/328 (0%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
L P H+++ + + H A LF +T +V V + ++S G D
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET--GLANVFVCNTILSWLCKQGKTD 460
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+A + + + + + + + N++ + K + + ILE G P Y +++L+
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR-LKGVMESERI 294
G + D ++A V + + + V + T+I+G CK G + L ++E +R+
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
+++++I+G KE D A ++EMC G+ PN +T+T+L++G CK+ ++D AL+
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
M ++G++ D+ Y ALI+G CK +++ A L +E+ GL P + + +L+ G
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFT 442
G+M +AL++ K+M+++G+ D +T
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYL--------------------EILECGYPPKVYL 230
+ L +LLR M + K PS E Y E+L G V
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
L+ G CK D+ SA ++FD++ K P V+F+ LI + K+G +E+ ME
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ P VF +I G K + +EA LFDE GL N T++ CK GK D
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTD 460
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A + M +GI P++V+YN ++ G C+ ++ AR + + + +GLKP+ T++ L+
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
DGC ++ D ++ALE+ M IE++ V +
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 118/204 (57%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N ++ GF K G++ SA ++E+ + P V+++ +L++G CK+ +++ ++ M+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++ + D+ + ALI+G CK S + A+ LF E+ GL P+ + +LI G G +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
AL ++ ML G+R DL TY LI+GL K G+L A +L EM A GL PD+I +T ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 411 DGCCKDGDMESALEIKKRMVEEGI 434
+G K G +++ + M + +
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 164/362 (45%), Gaps = 77/362 (21%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
+P+Q++ + +I A G MDDA++ + + + + A +L+ K
Sbjct: 301 VPSQET---YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + ++ + G P F+VL+ F K G++ A + ++ L P+V +T+I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 272 GYCKSGNVEEGFRLKGVMES-ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
G+ K EE +L ES E +VF + +++ LCK+ ++DEA L +M RG+
Sbjct: 418 GWLKGQKHEEALKL--FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY--------------NAL-- 374
PN V++ ++ G C+ +DLA F +L++G++P+ TY NAL
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 375 -------------------INGLCKVGDLKEARKLL------------------------ 391
INGLCKVG +AR+LL
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 392 ------------NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
EM G+ P+ IT+T+LM+G CK+ M+ ALE++ M +G++LD
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 440 AF 441
A+
Sbjct: 656 AY 657
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A L A+ ++ S + ++ +I + G MD AV + + + +L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ K + E E+ G + + L+ GFCK ++ SA +F E+ + L
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P+ +N+LISG+ GN+ L M + + D+ T++ LI+GL K+ A+ L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+ EM GLVP+ + +T +++G K G+ +K F+ M + P+++ YNA+I G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
G+L EA +L +EM +G+ PD TF L+ G
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + L++ + MD A++ ++ K +++ + A L+ K + +
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+LE G P ++N L+ GF +G++ +A ++ ++ K LR + ++ TLI G K
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 277 GN-------------------------VEEGFRLKGV----------MESERIFPDVFTF 301
GN + G KG M+ + P+V +
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+A+I G +E DEA L DEM +G++P+G TF L+ GQ
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
+FN L++ Y K + + M + P + ++ L + + EA L+ M
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
G+ + VT L+ ++ K AL+ +++G PD + Y+ + CK DL
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 385 KEARKLLNEMNARGL-KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
A LL EM + L P + T+T+++ K G+M+ A+ +K M+ +GI ++ VA T
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILEC----GYPPKVYLFNVLMHGFCKVGDIRSARL 249
RA + L+RY+ P + ++++ G+ FN L++ + K A
Sbjct: 125 RASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVD 184
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+ +++ + + P N +S + ++ E L M + + D T L+
Sbjct: 185 IVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI-RPDL 368
+E + EA + RG P+ + ++ + CK + +A + M ++ + P
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
TY ++I K G++ +A +L +EM + G+ + + T+L+ G CK+ D+ SAL + +
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 429 MVEEGIELDAVAFTM 443
M +EG ++V F++
Sbjct: 365 MEKEGPSPNSVTFSV 379
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 38/332 (11%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSAS---SLFASFLQTMPTQQSVLVFDVLISAYTDSG 172
L + F +A SLL + R S S SL L P L FD+ +SAY G
Sbjct: 88 LLSHHKFADAKSLLVSYI-RTSDASLSLCNSLLHPNLHLSPPPSKAL-FDIALSAYLHEG 145
Query: 173 FMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFN 232
A+Q + + + L+ L C LL +++ YP
Sbjct: 146 KPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR------------------YPSSF---- 183
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
I SAR VFD++ K + V +FN L++GYC G +E+ + M SE
Sbjct: 184 ----------SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 293 -RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
++ PD T++ ++ + K+ R + L +M + GLVPN VT+ L+ G CK G +
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + ++M + PDL TYN LINGLC G ++E +L++ M + L+PD +T+ TL+D
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 412 GCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
GC + G A ++ ++M +G++ + V +
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ + LI AY G + A++ +R + +K +++ +L + K + +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G+ + L+ GF + + A ++DE+ K K+ PTV +FN+LI G C G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E + + PD TF+++I G CKE R ++A ++E + P+ T
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L++G CK+G + AL F ++++ D VTYN +I+ CK LKEA LL+EM +
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
GL+PD+ T+ + + +DG + E+ K+
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P + ++ L+ + KVGD+ A + E+ ++ ++ ++ NT++ CK ++E
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L D T+ LI G +E + ++A ++DEM + + P TF +LI G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C GK +LA++KF + + G+ PD T+N++I G CK G +++A + NE KPD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
T L++G CK+G E AL ++EE E+D V +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTY 628
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L++ +KV + E E+ + G N ++ CK + A + + KR
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
V++ TLI G+ + VE+ + M+ +I P V TF++LI GLC +++ A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
FDE+ GL+P+ TF ++I G CK+G+V+ A + + + +PD T N L+NGL
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
CK G ++A N + + D +T+ T++ CKD ++ A ++ M E+G+E D
Sbjct: 602 CKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 439 VAF 441
+
Sbjct: 661 FTY 663
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ + + + ++ A +D+A + K+ + L+ + + + E
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ + P V FN L+ G C G A FDE+ + L P +FN++I GYC
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G VE+ F PD +T + L+NGLCKE +++A + F+ + V + V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTV 626
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ T+I CKD K+ A M ++G+ PD TYN+ I+ L + G L E +LL +
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Query: 395 NAR 397
+ +
Sbjct: 687 SGK 689
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 163/322 (50%), Gaps = 7/322 (2%)
Query: 125 AHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTD---SGFMDDAVQCI 181
++L+ LV + H A S + L+T T + + L+ Y +GF A +
Sbjct: 75 GNNLMAKLVRSRNHELAFSFYRKMLET-DTFINFVSLSGLLECYVQMRKTGF---AFGVL 130
Query: 182 RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
L+ K+ + LL+ + + G + E+ P V+ +N ++ GFC+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
++ A + +E+ ++V++ LI +CK+G ++E M+ + D+ +
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
++LI G C D LFDE+ RG P +T+ TLI G CK G++ A + F+ M++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
+G+RP++ TY LI+GLC VG KEA +LLN M + +P+ +T+ +++ CKDG +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 422 ALEIKKRMVEEGIELDAVAFTM 443
A+EI + M + D + + +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNI 392
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%)
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMH 236
AV +R +R+ +L + + ++R + K + E E+ G + + +L+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 237 GFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFP 296
FCK G + A E+ L +V + +LI G+C G ++ G L + P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
T++ LI G CK + EA+ +F+ M RG+ PN T+T LIDG C GK AL+
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
+M+++ P+ VTYN +IN LCK G + +A +++ M R +PD IT+ L+ G C
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 417 GDMESALEIKKRMVEE 432
GD++ A ++ M+++
Sbjct: 401 GDLDEASKLLYLMLKD 416
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 43/321 (13%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPP--GPSWE 214
+ + ++++I+ G + DAV+ + L++K+ + P N+L + K S
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR-PDNITYNILLGGLCAKGDLDEASKL 409
Query: 215 FYLEILECGYP-PKVYLFNVLMHGFC---------------------------------- 239
YL + + Y P V +N L+HG C
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 240 -KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG--NVEEGFRLKGVMESERIFP 296
K GD+ A ++ +I K+ ++ +I G+CK+G NV +G K M + P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK--MRVSELQP 527
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
VF ++ L++ LCKE D+A LF+EM R P+ V+F +IDG K G + A
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
M G+ PDL TY+ LIN K+G L EA ++M G +PD +++ C
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 417 GDMESALEIKKRMVEEGIELD 437
G+ + E+ K++V++ I LD
Sbjct: 648 GETDKLTELVKKLVDKDIVLD 668
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 147/288 (51%), Gaps = 2/288 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++ LI + G + +A + + ++ ++ + L+ + V + +
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++E P +N++++ CK G + A + + + KR+ RP +++N L+ G C G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 278 NVEEGFRLKGVM--ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+++E +L +M +S PDV +++ALI+GLCKE+R +A ++D + + + VT
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
L++ K G V+ A++ ++ + D I + TY A+I+G CK G L A+ LL +M
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
L+P + L+ CK+G ++ A + + M + D V+F +
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 6/315 (1%)
Query: 118 TRPPFREAHSLLCFLVSRKGHGSASSLFASFLQ-TMPTQQSVLVFDVLISAYTDSGFMDD 176
TRP + LL L ++ AS L L+ + T V+ ++ LI +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 177 AVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A+ L+ +K L R N LL +K + E + +I + + ++
Sbjct: 443 ALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
GFCK G + A+ + ++ +L+P+V +N L+S CK G++++ +RL M+ + F
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PDV +F+ +I+G K A L M R GL P+ T++ LI+ K G +D A+
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F M+D G PD ++++ G+ + +L+ ++ + + DK T+MD C
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC- 680
Query: 416 DGDMESALEIKKRMV 430
+ + +++ KR++
Sbjct: 681 --NSSANMDLAKRLL 693
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%)
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
F + L+ L + + A + +M N V+ + L++ + K A
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
+ML +G ++ +N L+ GLC+ + +A LL EM L PD ++ T++ G C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 418 DMESALEIKKRMVEEGIELDAVAF 441
++E ALE+ M G V +
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTW 215
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIR-LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
L F+++I A F+D A++ R + +K L C L+ + K + +
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC-TLMDGLCKEERIDEAVLLLD 246
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G P ++NVL+ G CK GD+ + D + + P V++NTLI G C G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+++ L M S + P+ T+ LINGL K+ R+ +A L M RG N ++
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI G K+GK + A+ ++ M ++G +P++V Y+ L++GLC+ G EA+++LN M A
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
G P+ T+++LM G K G E A+++ K M + G + +++
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 8/330 (2%)
Query: 122 FREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLV---FDVLISAYTDSGFMDDAV 178
F+ S L ++ + L + + V++ F V+ AY + D AV
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 179 QCI-RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI----LECGYPPKVYLFNV 233
R+V + + +++ ++L ++ EFY + + P FN+
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
++ CK+ + A VF +P+RK P ++ TL+ G CK ++E L M+SE
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
P ++ LI+GLCK+ L D M +G VPN VT+ TLI G C GK+D A+
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ M+ P+ VTY LINGL K +A +LL+ M RG ++ ++ L+ G
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFTM 443
K+G E A+ + ++M E+G + + V +++
Sbjct: 373 FKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCI-RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++ LI G +D AV + R+V K + + L+ ++K + +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY-GTLINGLVKQRRATDAVRLLS 351
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ E GY ++++VL+ G K G A ++ ++ ++ +P +V ++ L+ G C+ G
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E + M + P+ +T+S+L+ G K +EA ++ EM + G N ++
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LIDG C G+V A+ + ML GI+PD V Y+++I GLC +G + A KL +EM +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 398 ---GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+PD +T+ L+DG C D+ A+++ M++ G + D +
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 118/220 (53%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P +N L+HG C G + A + + + K P V++ TLI+G K +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
RL ME + +S LI+GL KE +++EA L+ +M +G PN V ++ L+DG
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C++GK + A + M+ G P+ TY++L+ G K G +EA ++ EM+ G +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
K ++ L+DG C G ++ A+ + +M+ GI+ D VA++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 6/272 (2%)
Query: 146 ASFLQTMPTQQSV---LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY 202
S L+ M + + + + + LI+ DAV+ + + ++ + L+
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 203 MMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT 262
+ K + + ++ E G P + +++VL+ G C+ G A+ + + + P
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 263 VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
++++L+ G+ K+G EE ++ M+ + F +S LI+GLC R EA ++
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ---GIRPDLVTYNALINGLC 379
+M G+ P+ V ++++I G C G +D ALK + ML Q +PD+VTYN L++GLC
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
D+ A LLN M RG PD IT T ++
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 135/293 (46%), Gaps = 5/293 (1%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE-FYLEILEC 222
+I +Y +SG D + + +R +N I R+ + R K P + + F+ + E
Sbjct: 83 MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR----PTVVSFNTLISGYCKSGN 278
V FN +++ G +D + + P +SFN +I CK
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V+ + M + PD +T+ L++GLCKE R DEA L DEM G P+ V +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LIDG CK G + K M +G P+ VTYN LI+GLC G L +A LL M +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
P+ +T+ TL++G K A+ + M E G L+ +++ + KE
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++ VLIS G ++A+ R + +K + + L+ + + P + E +
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P Y ++ LM GF K G A V+ E+ K ++ LI G C G V
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-CRR--GLVPNGVTF 336
+E + M + I PD +S++I GLC D A L+ EM C+ P+ VT+
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC-KVGDLKEARKLLNEMN 395
L+DG C + A+ MLD+G PD++T N +N L K + R L E+
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Query: 396 ARGLKPDKIT 405
R LK +++
Sbjct: 604 VRLLKRQRVS 613
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ L+ + +G ++AVQ + + K L+ + V + + ++L
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI---PKRKLRPTVVSFNTLISGYCKSG 277
G P ++ ++ G C +G + +A ++ E+ + K +P VV++N L+ G C
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS-DEANHLFDEMCRR--------- 327
++ L M PDV T + +N L ++S S D+ +E+ R
Sbjct: 555 DISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSG 614
Query: 328 -----------GLVPNGVTFTTLIDGQCKDGKVDLALKK 355
L P T+ ++ CK K++ A+ K
Sbjct: 615 ACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDK 653
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 156/306 (50%), Gaps = 2/306 (0%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P ++L+C L+ A LF + ++++ + + + V I Y SG A++
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
++ K + + AC L + K + + + + + G P +N++M +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
KVG+I A + E+ + P V+ N+LI+ K+ V+E +++ M+ ++ P V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
T++ L+ GL K + EA LF+ M ++G PN +TF TL D CK+ +V LALK M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+D G PD+ TYN +I GL K G +KEA ++M + + PD +T TL+ G K +
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLI 693
Query: 420 ESALEI 425
E A +I
Sbjct: 694 EDAYKI 699
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 35/304 (11%)
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
G + A +R +R+ + + L+ ++K + + E Y ++ G+ P + +
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+ LM G K DI S + E+ L+P V +F I ++G + E + + M+
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFD----------------------------- 322
E PDV T++ LI+ LC + D A +F+
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 323 ------EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
EM + G VP+ VTFT L+D CK G A +M DQGI P+L TYN LI
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
GL +V L +A +L M + G+KP T+ +D K GD SALE ++M +GI
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 437 DAVA 440
+ VA
Sbjct: 467 NIVA 470
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 1/321 (0%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP + SL+ L R+ S L ++T+ + +V F + I +G +++A
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKE-METLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ ++ + + + L+ + + + E + ++ + P + L+ F
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
D+ S + + E+ K P VV+F L+ CK+GN E F VM + I P++
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T++ LI GL + R D+A LF M G+ P T+ ID K G AL+ F+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M +GI P++V NA + L K G +EA+++ + GL PD +T+ +M K G+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 419 MESALEIKKRMVEEGIELDAV 439
++ A+++ M+E G E D +
Sbjct: 519 IDEAIKLLSEMMENGCEPDVI 539
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 4/306 (1%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN- 198
A +LF F + + Q + +++LI ++ ++ A Q + L K IP A N
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA-QDVFLQVKSTGCIPDVATYNF 825
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSA-RLVFDEIPKR 257
LL K +E Y E+ N+++ G K G++ A L +D + R
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
PT ++ LI G KSG + E +L M P+ ++ LING K +D A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
LF M + G+ P+ T++ L+D C G+VD L F+ + + G+ PD+V YN +ING
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 378 LCKVGDLKEARKLLNEM-NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
L K L+EA L NEM +RG+ PD T+ +L+ G +E A +I + G+E
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 437 DAVAFT 442
+ F
Sbjct: 1066 NVFTFN 1071
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 3/327 (0%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P F +LL +V A + +FL Q + L ++ LI + +D+AV
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Query: 180 -CIRLVRKKNLQIPLRACENLLRYMMKVKP-PGPSWEFYLEILECGYPPKVYLFNVLMHG 237
RLV + ++RY K G F + G PK+ +N+L+ G
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
+ I A+ VF ++ P V ++N L+ Y KSG ++E F L M + +
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 298 VFTFSALINGLCKESRSDEANHLF-DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
T + +I+GL K D+A L+ D M R P T+ LIDG K G++ A + F
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
+ MLD G RP+ YN LING K G+ A L M G++PD T++ L+D C
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
G ++ L K + E G+ D V + +
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNL 1001
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 148 FLQTMPTQ--QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMK 205
FLQ T V ++ L+ AY SG +D+ + + + + ++ ++K
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 206 VKPPGPSWEFYLEIL-ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ + Y +++ + + P + L+ G K G + A+ +F+ + RP
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
+N LI+G+ K+G + L M E + PD+ T+S L++ LC R DE H F E+
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALINGLCKVGD 383
GL P+ V + +I+G K +++ AL F M +GI PDL TYN+LI L G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
++EA K+ NE+ GL+P+ TF L+ G G E A + + MV G
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ F +L+ A +G +A + ++R + + L L+ +++V + E +
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P Y + V + + K GD SA F+++ + + P +V+ N + K+G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E ++ ++ + PD T++ ++ K DEA L EM G P+ +
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+LI+ K +VD A K F M + ++P +VTYN L+ GL K G ++EA +L M +
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ ITF TL D CK+ ++ AL++ +M++ G D +
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 131 FLVSRKGH-GSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR-LVRK 186
FL+ G G LF + + T + + + +++IS +G +DDA+ L+
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 187 KNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRS 246
++ L+ + K + + + +L+ G P ++N+L++GF K G+ +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
A +F + K +RP + +++ L+ C G V+EG ++ + PDV ++ +IN
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 307 GLCKESRSDEANHLFDEM-CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
GL K R +EA LF+EM RG+ P+ T+ +LI G V+ A K + + G+
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
P++ T+NALI G G + A + M G P+ T+ L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 257 RKLRP-----TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
RK+R S+N LI KS E + M E P + T+S+L+ GL K
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
D L EM GL PN TFT I + GK++ A + + M D+G PD+VTY
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
LI+ LC L A+++ +M KPD++T+ TL+D + D++S + M +
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 432 EGIELDAVAFTM 443
+G D V FT+
Sbjct: 357 DGHVPDVVTFTI 368
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + ++VL+ C VG + F E+ + L P VV +N +I+G KS +EE
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 283 FRLKGVMESER-IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
L M++ R I PD++T+++LI L +EA +++E+ R GL PN TF LI
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
G GK + A +Q M+ G P+ TY L N
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%)
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
L T + N ++ G +EE + +M+ I D T+ + L + +A
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+ +M G V N ++ LI K A++ ++ M+ +G RP L TY++L+ GL
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
K D+ LL EM GLKP+ TFT + + G + A EI KRM +EG D
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 439 VAFTM 443
V +T+
Sbjct: 294 VTYTV 298
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 154/308 (50%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
++G AS S ++ + SV + +I A G+ D + I + + + +
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
L+ + K + F E + G P + L+ +CK + A + ++
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
+R +P +V++ LI G SG++++ +K + + PD ++ L++GLCK R
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
A LF EM R ++P+ + TLIDG + G D A K F + +++G++ D+V +NA+
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I G C+ G L EA +N MN L PDK T++T++DG K DM +A++I + M +
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 435 ELDAVAFT 442
+ + V +T
Sbjct: 587 KPNVVTYT 594
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 35/259 (13%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ + +LI SG MDDAV MKVK
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVN------------------------MKVK---------- 440
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++ G P ++N+LM G CK G A+L+F E+ R + P + TLI G+ +SG
Sbjct: 441 -LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ +E ++ + + + DV +A+I G C+ DEA + M LVP+ T++
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+IDG K + A+K F+ M +P++VTY +LING C GD K A + EM R
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619
Query: 398 GLKPDKITFTTLMDGCCKD 416
L P+ +T+TTL+ K+
Sbjct: 620 DLVPNVVTYTTLIRSLAKE 638
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFYLEILEC 222
++ AY +SG + AV+ V + +P + AC +LL ++K + G + + Y E+ +
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G Y +L+ G C G + R + + + P +V +NT+I GYCK G++E
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL------------- 329
+ + ++ + P + TF +ING CKE ++ L E+ RGL
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 330 ----------------------VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
P+ T+ LI+ CK+GK ++A+ +G+ P+
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
++Y LI CK + A KLL +M RG KPD +T+ L+ G G M+ A+ +K
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 428 RMVEEGIELDAVAFTM 443
++++ G+ DA + M
Sbjct: 440 KLIDRGVSPDAAIYNM 455
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V +++LI+ G + AV + KK L + L++ K K + + L
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ E G P + + +L+HG G + A + ++ R + P +N L+SG CK+G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
L M I PD + ++ LI+G + DEA +F +G+ + V
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+I G C+ G +D AL M ++ + PD TY+ +I+G K D+ A K+ M
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
KP+ +T+T+L++G C GD + A E K M + + V +T ++ KE
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG-VMESERIFPDVFTFSALINGL 308
V + ++ T + + ++ Y +SG++ + + V+E PDV ++L++ L
Sbjct: 121 VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL 180
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
K R +A ++DEMC RG + + L+ G C +GKV++ K + +G P++
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
V YN +I G CK+GD++ A + E+ +G P TF T+++G CK+GD ++ +
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 429 MVEEGIEL 436
+ E G+ +
Sbjct: 301 VKERGLRV 308
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 21/277 (7%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
V+ LI + SG D+A + L +K +++ + +++ + + +
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN- 278
E P + ++ ++ G+ K D+ +A +F + K K +P VV++ +LI+G+C G+
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 279 --VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS-DEANHLFDEMCRRGLVPNGVT 335
EE F+ M+ + P+V T++ LI L KES + ++A + ++ M VPN VT
Sbjct: 607 KMAEETFK---EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 336 FTTLIDGQCK--------------DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
F L+ G K G+ L + F M G YN+ + LC
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
G +K A ++M +G PD ++F ++ G C G+
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF-- 215
V+ + +I + SG +D+A+ C+ + +++L ++ +K + + +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y+E +C P V + L++GFC GD + A F E+ R L P VV++ TLI K
Sbjct: 580 YMEKNKC--KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 276 -SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS------DEANH----LFDEM 324
S +E+ +M + + P+ TF+ L+ G K++ D +NH LF E
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEF 697
Query: 325 CRR----GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
R G + + + + C G V A M+ +G PD V++ A+++G C
Sbjct: 698 FHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCV 757
Query: 381 VGDLKEARKL 390
VG+ K+ R +
Sbjct: 758 VGNSKQWRNM 767
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIR-LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++++ +I+ G A + ++ L+++K + + +++ +KV + E Y
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ E G P V F L++GFCK + A + E+ +L+ + ++ LI G+CK
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+++ + L + + P+V +++LI+G + D A L+ +M G+ + T+T
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+IDG KDG ++LA + +LD GI PD + + L+NGL K G +A K+L EM +
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ P+ + ++T++ G ++G++ A + M+E+GI D F +
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A + + ++ S ++ +I + G D AV+ R + + + +L+
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
K + E E+ + + L+ GFCK D+++A +F E+P+ L
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P V +N+LISG+ G ++ L M ++ I D+FT++ +I+GL K+ + A+ L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+ E+ G+VP+ + L++G K G+ A K + M + + P+++ Y+ +I G +
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
G+L EA +L +EM +G+ D F L+ G
Sbjct: 813 EGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 21/290 (7%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
+P Q + +I A+ G M++AV+ + + + + + A +L+ K G
Sbjct: 306 VPASQET--YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + + + E G P +F+V++ FCK ++ A + + ++ P+ V +T+I
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGL---------CKESRSDEANHLFD 322
G K+ + E IF D F S + +G CK+ + D A
Sbjct: 424 GCLKAESPEAALE---------IFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
M ++G+ PN V + ++ C+ +DLA F ML++G+ P+ TY+ LI+G K
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
D + A ++N+MNA + +++ + T+++G CK G A E+ + +++E
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P V L++G+CK ++ A +F+ + + L P V F+ ++ +CK+
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E+ M+S RI P +I G K + A +F++ + +G
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCN 453
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ CK GKVD A ++M +GI P++V YN ++ C++ ++ AR + +EM +
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
GL+P+ T++ L+DG K+ D ++A ++ +M E + V +
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 20/315 (6%)
Query: 131 FLVSRKGHGSASSLFASFLQTMPTQ-QSVLV------------------FDVLISAYTDS 171
L S H AS+L F+ PT +V+V F+ L++AY +
Sbjct: 123 LLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRN 182
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
MD AV C L+ + + + N+L +++ + E Y +++ G
Sbjct: 183 KRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTT 242
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+LM + A +F + R P + F+ + CK+ ++ L M
Sbjct: 243 QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG 302
Query: 292 ERIFP-DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ P T++++I KE +EA + DEM G+ + + T+L++G CK ++
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
AL F M ++G+ PD V ++ ++ CK ++++A + M + + P + T++
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 411 DGCCKDGDMESALEI 425
GC K E+ALEI
Sbjct: 423 QGCLKAESPEAALEI 437
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+R ++ + P + + + ++ G P LF++ + CK D+ A + E+ +
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 259 LRP-TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
P + ++ ++I + K GN+EE R+ M I V ++L+NG CK + +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
LF+ M GL P+ V F+ +++ CK+ +++ A++ + M I P V + +I G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 378 ----------------------------------LCKVGDLKEARKLLNEMNARGLKPDK 403
CK G + A L M +G++P+
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + +M C+ +M+ A I M+E+G+E + +++
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
FN L++ + + + A F + RK+ P V N ++S +S ++E + M
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ D T L+ +E + +EA +F + RG P+G+ F+ + CK +
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 351 LALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+AL + M + G+ TY ++I K G+++EA ++++EM G+ I T+L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++G CK ++ AL++ RM EEG+ D V F++
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ F LI+ + S MD A++ ++ L++ L A L+ K ++ +
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ E G P V ++N L+ GF +G + +A ++ ++ + + ++ T+I G K
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 277 GNVE-------------------------EGFRLKGV----------MESERIFPDVFTF 301
GN+ G KG M+ + + P+V +
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
S +I G +E +EA L DEM +G+V + F L+ G+ +
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
N+L D R G F L++ ++ ++D A+ F +M+D+ + P + N +++
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
L + + EA+++ N+M G+ D +T LM ++ E A++I +R++ G E
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 437 DAVAFTMEEVAMQKEC 452
D + F++ A+Q C
Sbjct: 273 DGLLFSL---AVQAAC 285
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ F+ +I G D+A + ++ ++ L L++ + + K G ++
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ + G+PP V ++N L+ F + G + A + D + + L T ++NTLI GYCK+
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + RL M S + +F+++I LC D A EM R + P G
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TTLI G CK GK AL+ + L++G D T NAL++GLC+ G L EA ++ E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
RG D++++ TL+ GCC ++ A MV+ G++ D +++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 3/318 (0%)
Query: 127 SLLCFLVSRKGHGSASSLFAS-FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
S++C L S SA L+ M +L LIS G A++
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFL 497
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
K + R LL + + ++ EIL G +N L+ G C +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
A + DE+ KR L+P +++ LI G VEE + + + PDV+T+S +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
+G CK R++E FDEM + + PN V + LI C+ G++ +AL+ + M +GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
P+ TY +LI G+ + ++EA+ L EM GL+P+ +T L+DG K G M +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 426 KKRMVEEGIELDAVAFTM 443
+ M + + + + +T+
Sbjct: 738 LREMHSKNVHPNKITYTV 755
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 6/267 (2%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
++ LIS +D+A + + K+ L+ L+ + + + +F+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P VY ++V++ G CK + FDE+ + ++P V +N LI YC+SG +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
L+ M+ + I P+ T+++LI G+ SR +EA LF+EM GL PN +T LI
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 341 DGQCKDG---KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
DG K G KV+ L++ M + + P+ +TY +I G + G++ EA +LLNEM +
Sbjct: 723 DGYGKLGQMVKVECLLRE---MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALE 424
G+ PD IT+ + G K G + A +
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 159/318 (50%), Gaps = 7/318 (2%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQ---TMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRL 183
+L+ L H A L+ FL + T+ S + L+ ++G +D+A + +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS----NALLHGLCEAGKLDEAFRIQKE 530
Query: 184 VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD 243
+ + + + L+ K ++ F E+++ G P Y +++L+ G +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
+ A +D+ + + P V +++ +I G CK+ EEG M S+ + P+ ++
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
LI C+ R A L ++M +G+ PN T+T+LI G +V+ A F+ M +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ P++ Y ALI+G K+G + + LL EM+++ + P+KIT+T ++ G +DG++ A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 424 EIKKRMVEEGIELDAVAF 441
+ M E+GI D++ +
Sbjct: 771 RLLNEMREKGIVPDSITY 788
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P VYLF ++ FCK G + A +F ++ + + P VV+FNT+I G G +E
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
F K M + P + T+S L+ GL + R +A + EM ++G PN + + LID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ G ++ A++ +M+ +G+ TYN LI G CK G A +LL EM + G +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMV 430
+ +FT+++ C +SAL M+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEML 462
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+V++ LI ++ ++G ++ A++ L+ K L + L++ K +
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD-------EIPKRKLRPTVVSFNTL 269
E+L G FNV F V + + L+FD E+ R + P TL
Sbjct: 424 KEMLSIG-------FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
ISG CK G + L ++ D T +AL++GLC+ + DEA + E+ RG
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
V + V++ TLI G C K+D A M+ +G++PD TY+ LI GL + ++EA +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ G+ PD T++ ++DGCCK E E M+ + ++ + V +
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P N+L+ + + + FD + K + P V F T I+ +CK G VEE
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L ME + P+V TF+ +I+GL R DEA ++M RG+ P +T++ L+ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ ++ A + M +G P+++ YN LI+ + G L +A ++ + M ++GL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ TL+ G CK+G ++A + K M+ G ++ +FT
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
F + + Q + +V++ LI AY SG + A++ ++ K + +L++ M
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ + + E+ G P V+ + L+ G+ K+G + + E+ + + P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
++ +I GY + GNV E RL M + I PD T+ I G K+ EA DE
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 304 LINGLCKESRSDE---ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
LI C + + D A +F + +G+ P+ T L+ + + + F ++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
+G+ PD+ + IN CK G ++EA KL ++M G+ P+ +TF T++DG G +
Sbjct: 254 -KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 421 SALEIKKRMVEEGIELDAVAFTM 443
A K++MVE G+E + +++
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSI 335
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ F+ +I G D+A + ++ ++ L L++ + + K G ++
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ + G+PP V ++N L+ F + G + A + D + + L T ++NTLI GYCK+
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + RL M S + +F+++I LC D A EM R + P G
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TTLI G CK GK AL+ + L++G D T NAL++GLC+ G L EA ++ E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
RG D++++ TL+ GCC ++ A MV+ G++ D +++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 3/318 (0%)
Query: 127 SLLCFLVSRKGHGSASSLFAS-FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
S++C L S SA L+ M +L LIS G A++
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFL 497
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
K + R LL + + ++ EIL G +N L+ G C +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
A + DE+ KR L+P +++ LI G VEE + + + PDV+T+S +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
+G CK R++E FDEM + + PN V + LI C+ G++ +AL+ + M +GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
P+ TY +LI G+ + ++EA+ L EM GL+P+ +T L+DG K G M +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 426 KKRMVEEGIELDAVAFTM 443
+ M + + + + +T+
Sbjct: 738 LREMHSKNVHPNKITYTV 755
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 6/267 (2%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
++ LIS +D+A + + K+ L+ L+ + + + +F+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P VY ++V++ G CK + FDE+ + ++P V +N LI YC+SG +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
L+ M+ + I P+ T+++LI G+ SR +EA LF+EM GL PN +T LI
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 341 DGQCKDG---KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
DG K G KV+ L++ M + + P+ +TY +I G + G++ EA +LLNEM +
Sbjct: 723 DGYGKLGQMVKVECLLRE---MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALE 424
G+ PD IT+ + G K G + A +
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 159/318 (50%), Gaps = 7/318 (2%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQ---TMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRL 183
+L+ L H A L+ FL + T+ S + L+ ++G +D+A + +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS----NALLHGLCEAGKLDEAFRIQKE 530
Query: 184 VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD 243
+ + + + L+ K ++ F E+++ G P Y +++L+ G +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
+ A +D+ + + P V +++ +I G CK+ EEG M S+ + P+ ++
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
LI C+ R A L ++M +G+ PN T+T+LI G +V+ A F+ M +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ P++ Y ALI+G K+G + + LL EM+++ + P+KIT+T ++ G +DG++ A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 424 EIKKRMVEEGIELDAVAF 441
+ M E+GI D++ +
Sbjct: 771 RLLNEMREKGIVPDSITY 788
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P VYLF ++ FCK G + A +F ++ + + P VV+FNT+I G G +E
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
F K M + P + T+S L+ GL + R +A + EM ++G PN + + LID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ G ++ A++ +M+ +G+ TYN LI G CK G A +LL EM + G +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMV 430
+ +FT+++ C +SAL M+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEML 462
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+V++ LI ++ ++G ++ A++ L+ K L + L++ K +
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD-------EIPKRKLRPTVVSFNTL 269
E+L G FNV F V + + L+FD E+ R + P TL
Sbjct: 424 KEMLSIG-------FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
ISG CK G + L ++ D T +AL++GLC+ + DEA + E+ RG
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
V + V++ TLI G C K+D A M+ +G++PD TY+ LI GL + ++EA +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ G+ PD T++ ++DGCCK E E M+ + ++ + V +
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P N+L+ + + + FD + K + P V F T I+ +CK G VEE
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L ME + P+V TF+ +I+GL R DEA ++M RG+ P +T++ L+ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ ++ A + M +G P+++ YN LI+ + G L +A ++ + M ++GL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ TL+ G CK+G ++A + K M+ G ++ +FT
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
F + + Q + +V++ LI AY SG + A++ ++ K + +L++ M
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ + + E+ G P V+ + L+ G+ K+G + + E+ + + P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
++ +I GY + GNV E RL M + I PD T+ I G K+ EA DE
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 304 LINGLCKESRSDE---ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
LI C + + D A +F + +G+ P+ T L+ + + + F ++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
+G+ PD+ + IN CK G ++EA KL ++M G+ P+ +TF T++DG G +
Sbjct: 254 -KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 421 SALEIKKRMVEEGIELDAVAFTM 443
A K++MVE G+E + +++
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSI 335
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 124/223 (55%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+++++ +L+ G PP + +L+ + G I A VF + L+ VV++N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GY K+ + + F L M S I PDV T++ LI+ + DEAN + E+ RRG VP
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + FT +I G K G A + M D ++PD+VT +AL++G CK +++A L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
N++ GLKPD + + TL+ G C GD+E A E+ MV+ G+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 3/231 (1%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
WE + + G P + F V + CK G ++ A V ++ + VS +++I G
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
+CK G EE +L + S R+ P++F +S+ ++ +C A+ +F E+ GL+P+
Sbjct: 351 FCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
V +TT+IDG C G+ D A + F +L G P L T LI + G + +A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M GLK D +T+ LM G K + E+ M GI D + +
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+LI A + G + DA R ++ + L++ + NL+ K +E E+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P V +N+L+H G I A + E+ +R P+ ++F +I G+ K G+ +E
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
F L M R+ PDV T SAL++G CK R ++A LF+++ GL P+ V + TLI G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
C G ++ A + +M+ +G+ P+ T++AL+ GL
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 3/283 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ F V I +GF+ +A + ++ + + +++ KV P + +
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL-- 363
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
I P +++++ + C GD+ A +F EI + L P V + T+I GYC G
Sbjct: 364 -IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ F+ G + P + T + LI + +A +F M GL + VT+
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ G K +++ + M GI PD+ TYN LI+ + G + EA ++++E+ R
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G P + FT ++ G K GD + A + M + ++ D V
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L+ +V + AR + + R + I YC G ++G+ L M+
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I PD+ F+ I+ LCK EA + ++ G+ + V+ +++IDG CK GK + A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
K ++ +RP++ Y++ ++ +C GD+ A + E+ GL PD + +TT++DG
Sbjct: 362 K---LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 414 CKDGDMESALEIKKRMVEEG 433
C G + A + +++ G
Sbjct: 419 CNLGRTDKAFQYFGALLKSG 438
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 242 GDIRSARLVFDEIPKRKLRPTVVS--FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
G+ RS LV ++ + ++ V+ F+ LI + V +L ++ IFP
Sbjct: 178 GEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRG 237
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
+L+ + + + A + M RG N + I C DG D + M
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGM 297
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
GIRPD+V + I+ LCK G LKEA +L ++ G+ D ++ ++++DG CK G
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 420 ESALEI 425
E A+++
Sbjct: 358 EEAIKL 363
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 124/223 (55%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+++++ +L+ G PP + +L+ + G I A VF + L+ VV++N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GY K+ + + F L M S I PDV T++ LI+ + DEAN + E+ RRG VP
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + FT +I G K G A + M D ++PD+VT +AL++G CK +++A L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
N++ GLKPD + + TL+ G C GD+E A E+ MV+ G+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 3/231 (1%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
WE + + G P + F V + CK G ++ A V ++ + VS +++I G
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
+CK G EE +L + S R+ P++F +S+ ++ +C A+ +F E+ GL+P+
Sbjct: 351 FCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
V +TT+IDG C G+ D A + F +L G P L T LI + G + +A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M GLK D +T+ LM G K + E+ M GI D + +
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+LI A + G + DA R ++ + L++ + NL+ K +E E+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P V +N+L+H G I A + E+ +R P+ ++F +I G+ K G+ +E
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
F L M R+ PDV T SAL++G CK R ++A LF+++ GL P+ V + TLI G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
C G ++ A + +M+ +G+ P+ T++AL+ GL
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 3/283 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ F V I +GF+ +A + ++ + + +++ KV P + +
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL-- 363
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
I P +++++ + C GD+ A +F EI + L P V + T+I GYC G
Sbjct: 364 -IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ F+ G + P + T + LI + +A +F M GL + VT+
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ G K +++ + M GI PD+ TYN LI+ + G + EA ++++E+ R
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G P + FT ++ G K GD + A + M + ++ D V
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L+ +V + AR + + R + I YC G ++G+ L M+
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I PD+ F+ I+ LCK EA + ++ G+ + V+ +++IDG CK GK + A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
K ++ +RP++ Y++ ++ +C GD+ A + E+ GL PD + +TT++DG
Sbjct: 362 K---LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 414 CKDGDMESALEIKKRMVEEG 433
C G + A + +++ G
Sbjct: 419 CNLGRTDKAFQYFGALLKSG 438
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 242 GDIRSARLVFDEIPKRKLRPTVVS--FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
G+ RS LV ++ + ++ V+ F+ LI + V +L ++ IFP
Sbjct: 178 GEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRG 237
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
+L+ + + + A + M RG N + I C DG D + M
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGM 297
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
GIRPD+V + I+ LCK G LKEA +L ++ G+ D ++ ++++DG CK G
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 420 ESALEI 425
E A+++
Sbjct: 358 EEAIKL 363
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 3/293 (1%)
Query: 135 RKGHGSASSLFASFLQT-MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPL 193
R G+ + +FA ++ + + +V+ ++ LI+ Y G ++ + +RL+ ++ + +
Sbjct: 237 RSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNV 296
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEIL-ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+L++ K K E E+L E +++ VLM G+C+ G IR A V D
Sbjct: 297 VTYTSLIKGYCK-KGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+ + +R N+LI+GYCKSG + E ++ M + PD T++ L++G C+
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
DEA L D+MC++ +VP +T+ L+ G + G L +++ML +G+ D ++ +
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
L+ L K+GD EA KL + ARGL D IT ++ G CK + A EI
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 167/326 (51%), Gaps = 14/326 (4%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHG-----SASSLFASFLQTMPTQQSVLVFDVLISAYTD 170
L+ +++ S LC LV+ G +F F PT VFD+++ Y +
Sbjct: 114 LSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEF-SFSPT-----VFDMILKVYAE 167
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPG-PSWEFYLEILECGYPPKVY 229
G + +A+ + +IP N L + K + Y +++ P V+
Sbjct: 168 KGLVKNALHVFDNMGNYG-RIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVF 226
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+++++ +C+ G++ A + E L VV++N+LI+GY G+VE R+ +
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRL 286
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M + +V T+++LI G CK+ +EA H+F+ + + LV + + L+DG C+ G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ A++ M++ G+R + N+LING CK G L EA ++ + MN LKPD T+ T
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGI 434
L+DG C+ G ++ AL++ +M ++ +
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEV 432
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 145/281 (51%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW 213
++V+ + LI Y G M++A L+++K L L+ + +
Sbjct: 292 VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAV 351
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ ++E G + N L++G+CK G + A +F + L+P ++NTL+ GY
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C++G V+E +L M + + P V T++ L+ G + + L+ M +RG+ +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
++ +TL++ K G + A+K ++ +L +G+ D +T N +I+GLCK+ + EA+++L+
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+N KP T+ L G K G+++ A +K+ M +GI
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 116/218 (53%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G V +N L++G+ +GD+ V + +R + VV++ +LI GYCK G +EE
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+ +++ +++ D + L++G C+ + +A + D M G+ N +LI+G
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK G++ A + F M D ++PD TYN L++G C+ G + EA KL ++M + + P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+T+ L+ G + G L + K M++ G+ D ++
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 11/327 (3%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK-NLQIPL 193
RKG + + + V ++++AY SG +D A+ + L++ +
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 194 RACENLLR-YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+L+ Y M G + L + E G V + L+ G+CK G + A VF+
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRL-MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+ ++KL + L+ GYC++G + + R+ M + + ++LING CK
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ EA +F M L P+ T+ TL+DG C+ G VD ALK M + + P ++TYN
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
L+ G ++G + L M RG+ D+I+ +TL++ K GD A+++ + ++
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 433 GIELDAVAFT--------MEEVAMQKE 451
G+ D + ME+V KE
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKE 527
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 39/317 (12%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V + L Y G + +A + +K + + L+ K + +
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLV 599
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK------------------ 258
+E+ G P V + L+ G+C +G I A E+ ++
Sbjct: 600 IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 659
Query: 259 --------LRPTVVSFNTLISGYCKSGNVEEG-----FRLKGVMES-------ERIFPDV 298
L +V F+ L+ GY E + + + ES + + P+
Sbjct: 660 DKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNN 719
Query: 299 FTFSALINGLCKESRSDEANHLF-DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
++ I GLCK + ++A LF D + +P+ T+T LI G G ++ A
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M +GI P++VTYNALI GLCK+G++ A++LL+++ +G+ P+ IT+ TL+DG K G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 418 DMESALEIKKRMVEEGI 434
++ A+ +K++M+E+G+
Sbjct: 840 NVAEAMRLKEKMIEKGL 856
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ +++L+ Y+ G D + +++ K+ + +C LL + K+ + + +
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+L G NV++ G CK+ + A+ + D + + +P V ++ L GY K
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GN++E F +K ME + IFP + ++ LI+G K ++ L E+ RGL P T+
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
LI G C G +D A M+++GI ++ + + N L ++ + EA LL ++
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 43/317 (13%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA----CENLLRYMMKVKPPGPSWEF 215
++ VL+ Y +G + DAV+ V ++I +R C +L+ K + +
Sbjct: 333 MYGVLMDGYCRTGQIRDAVR----VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ + + P + +N L+ G+C+ G + A + D++ ++++ PTV+++N L+ GY +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 276 SGN--------------------------VEEGFRLKGVMESERIF---------PDVFT 300
G +E F+L E+ +++ D T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+ +I+GLCK + +EA + D + P T+ L G K G + A + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
+GI P + YN LI+G K L + L+ E+ ARGL P T+ L+ G C G ++
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 421 SALEIKKRMVEEGIELD 437
A M+E+GI L+
Sbjct: 629 KAYATCFEMIEKGITLN 645
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 41/260 (15%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + ++N L+ G K + + E+ R L PTV ++ LI+G+C G +++
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC----------------- 325
+ M + I +V S + N L + + DEA L ++
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 326 ---------------------RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML--DQ 362
++ LVPN + + I G CK GK++ A K F +L D+
Sbjct: 691 ASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR 750
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
I PD TY LI+G GD+ +A L +EM +G+ P+ +T+ L+ G CK G+++ A
Sbjct: 751 FI-PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 423 LEIKKRMVEEGIELDAVAFT 442
+ ++ ++GI +A+ +
Sbjct: 810 QRLLHKLPQKGITPNAITYN 829
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P Y + +L+HG GDI A + DE+ + + P +V++N LI G CK GNV+
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
RL + + I P+ T++ LI+GL K EA L ++M +GLV G
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR----------GS 860
Query: 344 CKDGKVDL 351
K G VD+
Sbjct: 861 DKQGDVDI 868
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 142/269 (52%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ + +V+++ +I + DDA+ + K ++ + +L+ +
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ +++E P + F+ L+ F K G + A +++E+ KR + P + ++++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI+G+C + E ++ +M + P+V T++ LING CK R D+ LF EM +RG
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
LV N VT+TTLI G + D A F+ M+ G+ P+++TYN L++GLCK G L +A
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDG 417
+ + ++PD T+ +++G CK G
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 146/289 (50%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q ++ + +++ G D A+ + + ++ + ++ + K + +
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ G P V ++ L+ C G A + ++ +RK+ P +V+F+ LI +
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K G + + +L M I P++FT+S+LING C R EA + + M R+ +PN V
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ TLI+G CK +VD ++ F+ M +G+ + VTY LI+G + D A+ + +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ G+ P+ +T+ L+DG CK+G + A+ + + + +E D + +
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 130/224 (58%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G P + + +++G CK GD A + +++ K+ VV ++T+I CK +
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++ L ME++ + P+V T+S+LI+ LC R +A+ L +M R + PN VTF+
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LID K GK+ A K ++ M+ + I P++ TY++LING C + L EA+++L M +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P+ +T+ TL++G CK ++ +E+ + M + G+ + V +T
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 121/218 (55%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ GY P + N L++GFC I A + D++ + +P V+F TLI G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E L M PD+ T+ A++NGLCK +D A +L ++M + N V ++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+ID CK D AL F M ++G+RP+++TY++LI+ LC G +A +LL++M R
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ P+ +TF+ L+D K G + A ++ + M++ I+
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%), Gaps = 3/214 (1%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++E GY P F L+HG A + D + +R +P +V++ +++G CK G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + L ME+ +I +V +S +I+ LCK D+A +LF EM +G+ PN +T++
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+LI C G+ A + M+++ I P+LVT++ALI+ K G L +A KL EM R
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 398 GLKPDKITFTTLMDGCC---KDGDMESALEIKKR 428
+ P+ T+++L++G C + G+ + LE+ R
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+EIL G +Y +N+L++ FC+ + A + ++ K P +V+ N+L++G+C
Sbjct: 104 MEIL--GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ + L M PD TF+ LI+GL +++ EA L D M +RG P+ VT+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+++G CK G DLAL M I ++V Y+ +I+ LCK +A L EM
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+G++P+ IT+++L+ C G A + M+E I + V F+
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 130/245 (53%), Gaps = 1/245 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A +LF ++ + +V+ + LIS + G DA + + + ++ + L L+
Sbjct: 272 ALNLFTE-MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+K + + Y E+++ P ++ ++ L++GFC + + A+ + + + ++
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P VV++NTLI+G+CK+ V++G L M + + T++ LI+G + D A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M G+ PN +T+ L+DG CK+GK+ A+ F+ + + PD+ TYN +I G+CK
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 381 VGDLK 385
G K
Sbjct: 511 AGKWK 515
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F + + + P+++ F+ L+S K + ME I +++T++ LIN C
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ SR A L +M + G P+ VT +L++G C ++ A+ M++ G +PD V
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+ LI+GL EA L++ M RG +PD +T+ +++G CK GD + AL + +M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 430 VEEGIELDAVAFT 442
IE + V ++
Sbjct: 245 EAAKIEANVVIYS 257
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L GVM R FP + FS L++ + K ++ D ++M G+ N T+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI+ C+ ++ LAL M+ G PD+VT N+L+NG C + +A L+++M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
KPD +TFTTL+ G A+ + RMV+ G + D V +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%)
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+A LF M + P+ + F+ L+ K K DL + + M GI +L TYN L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
IN C+ L A LL +M G +PD +T +L++G C + A+ + +MVE G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 435 ELDAVAFT 442
+ D V FT
Sbjct: 180 KPDTVTFT 187
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 63/126 (50%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ ++ LI+ + + +D ++ R + ++ L L+ + + + +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++ G P + +N+L+ G CK G + A +VF+ + + + P + ++N +I G CK+
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 277 GNVEEG 282
G + G
Sbjct: 512 GKWKMG 517
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 35/262 (13%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ ++ E G P +Y +N LM+G + SA VF+ + +++P +V++NT+I GYCK
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 269
Query: 276 SGNVEEGFRLKGVMESERIFPDVFT----------------------------------- 300
+G ++ ME+ D T
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
FS +I GLCKE + +E +F+ M R+G PN +T LIDG K G V+ A++ M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
D+G +PD+VTY+ ++NGLCK G ++EA + GL + + +++L+DG K G ++
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 421 SALEIKKRMVEEGIELDAVAFT 442
A + + M E+G D+ +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYN 471
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 4/324 (1%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P + L+ LVS SA +F +++ + ++ ++ +I Y +G A++
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAME 278
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+R + + + +++ G Y E+ E G + F++++ G C
Sbjct: 279 KLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K G + VF+ + ++ +P V + LI GY KSG+VE+ RL M E PDV
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 300 TFSALINGLCKESRSDEANHLFDEMCR-RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T+S ++NGLCK R +EA F CR GL N + +++LIDG K G+VD A + F+
Sbjct: 399 TYSVVVNGLCKNGRVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFTTLMDGCCKDG 417
M ++G D YNALI+ K + EA L M G T+T L+ G K+
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 418 DMESALEIKKRMVEEGIELDAVAF 441
E AL++ M+++GI A F
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACF 541
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
EI + +P V N L+ F K+G + V+ ++ + + PT+ ++N L++G +
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V+ R+ VMES RI PD+ T++ +I G CK ++ +A +M RG + +T+
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T+I D + +Q M ++GI+ ++ +I GLCK G L E + M +
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
G KP+ +T L+DG K G +E A+ + RM++EG + D V +++
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW 213
++ +V ++ VLI Y SG ++DA++ + + + + + ++ + K +
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+++ G ++ L+ G K G + A +F+E+ ++ +N LI +
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 274 CKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
K V+E L K + E E V+T++ L++G+ KE R++EA L+D M +G+ P
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
F L G C GKV A K + G+ D + +IN LCK G +KEA KL +
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLAD 596
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ RG + T +++ K G + A+++ + G E
Sbjct: 597 GITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 56/259 (21%)
Query: 198 NLLRYMMKV----KPPGPSWEF---------YLEILECGYPPKVYLFNVLMHGFCKVGDI 244
N + +++K + P +W F Y LEC V L +VL D+
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLEC----YVSLVDVLALA----KDV 168
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
R V EI K + TV + N LI + K G VEE
Sbjct: 169 DRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELL--------------------- 207
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
++ +M G+ P T+ L++G VD A + F++M I
Sbjct: 208 --------------WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
+PD+VTYN +I G CK G ++A + L +M RG + DKIT+ T++ C D D S +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 425 IKKRMVEEGIELDAVAFTM 443
+ + M E+GI++ AF++
Sbjct: 314 LYQEMDEKGIQVPPHAFSL 332
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 133/249 (53%)
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE 253
R+ L+ ++K ++E + + E G +N+++ GFCK G + A + +E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
+ + PTVV++ ++I G K ++E + L +S+RI +V +S+LI+G K R
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
DEA + +E+ ++GL PN T+ +L+D K +++ AL FQ M + P+ VTY
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LINGLCKV +A EM +G+KP I++TT++ G K G++ A + R G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 434 IELDAVAFT 442
D+ +
Sbjct: 793 GVPDSACYN 801
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP F A++ L S H +Q + + +V +F LI + G +D A+
Sbjct: 165 RPAF-SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ ++ +L + + KV +W+F+ EI G P + ++
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
CK + A +F+ + K + P ++NT+I GY +G +E + L ++ P V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
++ ++ L K + DEA +F+EM ++ PN T+ LID C+ GK+D A +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M G+ P++ T N +++ LCK L EA + EM+ + PD+ITF +L+DG K G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
++ A ++ ++M++ +++ +T
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYT 486
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 142/284 (50%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+V+ LI + + G +D + + + +N L+ + M K P + E
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I + P +++L+HG K G +F + ++ ++N +I G+CK G
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V + ++L M+++ P V T+ ++I+GL K R DEA LF+E + + N V +++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LIDG K G++D A + ++ +G+ P+L T+N+L++ L K ++ EA M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P+++T+ L++G CK A + M ++G++ +++T
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Query: 174 MDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNV 233
+ + ++++RK + A L+ V + ++ E GY P V+LF
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L+ GF K G + SA + DE+ L +V +N I + K G V+ ++ +E+
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
+ PD T++++I LCK +R DEA +F+ + + VP + T+I G GK D A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ +G P ++ YN ++ L K+G + EA K+ EM + P+ T+ L+D
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDML 387
Query: 414 CKDGDMESALEIKKRMVEEGI 434
C+ G +++A E++ M + G+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGL 408
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 129/252 (51%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ +LI +GF ++ + ++++ + RA ++ K +++ E+
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G+ P V + ++ G K+ + A ++F+E +++ VV +++LI G+ K G ++
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E + + + + + P+++T+++L++ L K +EA F M PN VT+ LI
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G CK K + A +Q M QG++P ++Y +I+GL K G++ EA L + A G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 401 PDKITFTTLMDG 412
PD + +++G
Sbjct: 795 PDSACYNAMIEG 806
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ F LI G +DDA + + + + +L++ + Y +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++ P + L N M K G+ R +F+EI R+ P S++ LI G K+G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E + L M+ + D ++ +I+G CK + ++A L +EM +G P VT+ +
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+IDG K ++D A F+ + I ++V Y++LI+G KVG + EA +L E+ +G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
L P+ T+ +L+D K ++ AL + M E
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 138 HGSASSLFAS----FLQTMPTQQSVL---VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ 190
HG + FA+ +M Q VL ++++I + G ++ A Q + ++ K +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV 250
+ +++ + K+ ++ + E V +++ L+ GF KVG I A L+
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
+E+ ++ L P + ++N+L+ K+ + E M+ + P+ T+ LINGLCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
+ ++A + EM ++G+ P+ +++TT+I G K G + A F G PD
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
YNA+I GL +A L E RGL T L+D K+ +E A + +
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 431 EEG 433
E G
Sbjct: 860 ETG 862
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++ +I Y +G D+A + R K + A +L + K+ + + + E+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ P + +N+L+ C+ G + +A + D + K L P V + N ++ CKS +
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+E + M+ + PD TF +LI+GL K R D+A ++++M N + +T+L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I G+ + K ++ M++Q PDL N ++ + K G+ ++ R + E+ AR
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
PD +++ L+ G K G E+ M E+G LD A+ +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 135/283 (47%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
+++LI +G +D A + ++K L +R ++ + K + + + E+
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
P F L+ G KVG + A V++++ R + + +LI + G
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E+G ++ M ++ PD+ + ++ + K ++ +F+E+ R VP+ +++ L
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I G K G + + F M +QG D YN +I+G CK G + +A +LL EM +G
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+P +T+ +++DG K ++ A + + + IEL+ V ++
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 123/237 (51%)
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
+L+ + KV +++ Y ++L+ ++ L+ F G ++ ++ +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
P + NT + K+G E+G + +++ R PD ++S LI+GL K ++E
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
LF M +G V + + +IDG CK GKV+ A + + M +G P +VTY ++I+G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
L K+ L EA L E ++ ++ + + +++L+DG K G ++ A I + ++++G+
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+LR + V + +Y E + P+ Y +L+ C+ D + + E+
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFD--ALDQILGEMSVAG 128
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
P+V + ++ G K+ + EG+ + +M + P ++ LI + SD
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
LF +M G P FTTLI G K+G+VD AL M + D+V YN I+
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
KVG + A K +E+ A GLKPD++T+T+++ CK ++ A+E+
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G+ P V ++ G K +R V + K K RP ++ TLI +
Sbjct: 123 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ + L M+ P V F+ LI G KE R D A L DEM L + V +
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
ID K GKVD+A K F + G++PD VTY ++I LCK L EA ++ +
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P + T++ G G + A + +R +G +A+
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P+ + L+ C+ D + + EM G P+ T ++ G K K+
Sbjct: 98 PESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
Q+M RP Y LI V L +M G +P FTTL+ G K
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
+G ++SAL + M ++ D V + +
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNV 243
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A + A +++ + S +V++ LIS + +G ++ A + K + L LL
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD-IRSARLVFDEIPKRKL 259
Y + E++ G Y +N L+ C+V + + E+ R
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
VVS++TLI +C++ N + +RL M + + +V T+++LI +E S A
Sbjct: 323 -CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
L D+M GL P+ + +TT++D CK G VD A F M++ I PD ++YN+LI+GLC
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+ G + EA KL +M + PD++TF ++ G + + +A ++ +M+++G LD
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 3/287 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + +LI+ +G + DAV+ + + + +AC L+ + + ++E
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA 208
Query: 218 E-ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E I ++N L+ GFCK G I A + + K P +V++N L++ Y +
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA-NHLFDEMCRRGLVPNGVT 335
++ + M I D ++++ L+ C+ S D+ N + EM RG + V+
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVS 327
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++TLI+ C+ A + F+ M +G+ ++VTY +LI + G+ A+KLL++M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
GL PD+I +TT++D CK G+++ A + M+E I DA+++
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 139/280 (49%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLR 194
+ G + S++ + + ++ ++VL++ Y D+ + A + + + +Q+
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAY 291
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
+ LL+ +V P + F ++ +E V ++ L+ FC+ + R A +F+E+
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
++ + VV++ +LI + + GN +L M + PD ++ +++ LCK
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+A +F++M + P+ +++ +LI G C+ G+V A+K F+ M + PD +T+ +
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
I GL + L A K+ ++M +G D+ TL+ C
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P ++ FNV + C+ + A F + +R P VVS+ LI+G ++G V +
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP-NGVTFTTLID 341
+ M + PD +AL+ GLC + D A + E + V + V + LI
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G CK G+++ A M G PDLVTYN L+N LK A ++ EM G++
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 402 DKITFTTLMDGCCK 415
D ++ L+ C+
Sbjct: 289 DAYSYNQLLKRHCR 302
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV- 298
K G I +A VFDE+ R +N I + E F L +E I+ D+
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVR----ESRFEL-----AEAIYWDMK 71
Query: 299 --------FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
FT+S I+GLCK + D + L +M G +P+ F +D C++ KV
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A++ F M+ +G PD+V+Y LINGL + G + +A ++ N M G+ PD L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 411 DGCCKDGDMESALEIKKRMVEEGIE 435
G C ++ A E MV E I+
Sbjct: 192 VGLCHARKVDLAYE----MVAEEIK 212
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVME--SERIFPDVFTFSALINGLCKESRSDEANHLF 321
+++ + I+ KSG ++ ++ M S R+F F ++ I L +ESR + A ++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFS--FDYNRFIGVLVRESRFELAEAIY 67
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+M G T++ I G CK K DL M G PD+ +N ++ LC+
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+ A + M RG +PD +++T L++G + G + A+EI M+ G+ D A
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+ + I L K D A +FDEM + I ++ + +LA +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M G TY+ I+GLCKV LL++M G PD F +D C++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 419 MESALEIKKRMVEEGIELDAVAFTM 443
+ A++ MV+ G E D V++T+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTI 154
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 9/290 (3%)
Query: 148 FLQTMPTQQ---SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM 204
LQ M Q S +F +IS Y G + AV+ +++ ++ ++L ++
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
+ Y ++ G+ P V+ +NVL+ CK + A+ + E+ + P V
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
S+ T+IS C+ G V+EG L +ER P V ++ALINGLCKE A L EM
Sbjct: 218 SYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
+G+ PN ++++TLI+ C G+++LA ML +G P++ T ++L+ G G
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 385 KEARKLLNEM-NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+A L N+M GL+P+ + + TL+ G C G++ A+ + M E G
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ + LI+ +SG ++ A + + K+ + +L++ + + +
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
Query: 217 LEILEC-GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+++ G P V +N L+ GFC G+I A VF + + P + ++ +LI+G+ K
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G+++ + M + P+V ++ ++ LC+ S+ EA L + M + P+ T
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
F I G C G++D A K F+ M Q P++VTYN L++GL K ++EA L E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
RG++ T+ TL+ G C G AL++ +M+ +G D + M +A K+
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V V++ LI+ A + +R + +K + + + L+ + ++ F
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKS 276
++L+ G P +Y + L+ G G A +++++ + L+P VV++NTL+ G+C
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GN+ + + ME P++ T+ +LING K D A +++++M G PN V +
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T +++ C+ K A +IM + P + T+NA I GLC G L A K+ +M
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 397 RG-LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ P+ +T+ L+DG K +E A + + + G+E + +
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 5/308 (1%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
CFL R A L+ ++ Q +V+ ++ L+ + G + AV + +
Sbjct: 326 CFL--RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+R +L+ K + + ++L G P V ++ ++ C+ + A
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE-RIFPDVFTFSALINGL 308
+ + + K P+V +FN I G C +G ++ ++ ME + R P++ T++ L++GL
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
K +R +EA L E+ RG+ + T+ TL+ G C G +AL+ M+ G PD
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNA--RGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+T N +I CK G + A ++L+ ++ R +PD I++T ++ G C+ E + +
Sbjct: 564 ITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILL 623
Query: 427 KRMVEEGI 434
+RM+ GI
Sbjct: 624 ERMISAGI 631
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
F V++ G + S + + ++ + + F ++IS Y + G E + ++
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
P V ++ +++ L E+R ++ +M R G PN T+ L+ CK+ KVD
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A K M ++G PD V+Y +I+ +C+VG +KE R+L A +P + L+
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALI 253
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+G CK+ D + A E+ + MVE+GI + ++++
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEF 215
SV F+ I D+G +D A + R + +++ P N LL + K ++
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
EI G +N L+HG C G A + ++ P ++ N +I YCK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 276 SGNVEEGFRLKGVMESER--IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
G E ++ ++ R PDV +++ +I GLC+ + ++ L + M G+VP+
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 334 VTFTTLID 341
T++ LI+
Sbjct: 636 ATWSVLIN 643
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A +F Q +++ ++ L+ + +++A R + + ++ LL
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP--KRK 258
PG + + +++ G P N+++ +CK G A + D + +RK
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
RP V+S+ +I G C+S E+G L M S I P + T+S LIN
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
TF +I L + + D +L +M +G + F ++I + G + A++ F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ + G P + YN +++ L ++ + +M G +P+ T+ L+ CK+
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 419 MESALEIKKRMVEEGIELDAVAFT-----MEEVAMQKE 451
++ A ++ M +G DAV++T M EV + KE
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 34/290 (11%)
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
C L++ + K +++ EI G P + + ++ G+ GD+ SA+ V +E+
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
R P ++ L+ GYCK G E + ME I P+ T+ +I LCKE +S
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-------------- 360
EA ++FDEM R +P+ +ID C+D KVD A ++ ML
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 361 --------------------DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
++G P L+TYN LI G+C+ G+L EA +L ++M R K
Sbjct: 373 IHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
P+ T+ L++G K+G+++ + + + M+E G + F + +QK
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 119/251 (47%), Gaps = 36/251 (14%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK-- 275
E+L+ G+ P + VLM G+CK+G A V D++ K ++ P V++ +I CK
Sbjct: 251 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 276 -SGN--------------------------------VEEGFRLKGVMESERIFPDVFTFS 302
SG V+E L M PD S
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
LI+ LCKE R EA LFDE +G +P+ +T+ TLI G C+ G++ A + + M ++
Sbjct: 371 TLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
+P+ TYN LI GL K G++KE ++L EM G P+K TF L +G K G E A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 423 LEIKKRMVEEG 433
++I V G
Sbjct: 490 MKIVSMAVMNG 500
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
Query: 220 LECGYPP---KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
L YPP LF L+ + G S+ +F IP ++ +V S NTL++ ++
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 277 GNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+ + K ES I P++FT + L+ LCK++ + A + DE+ GLVPN VT
Sbjct: 169 QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+TT++ G G ++ A + + MLD+G PD TY L++G CK+G EA ++++M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
++P+++T+ ++ CK+ A + M+E D+
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 5/250 (2%)
Query: 187 KNLQIPLRACENLLRYMMKVKPPGPSWE----FYLEILECGYPPKVYLFNVLMHGFCKVG 242
+N P++ ENL +++ +E +L I + G V N L++ +
Sbjct: 110 RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 243 DIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
+F + + P + + N L+ CK ++E +++ + S + P++ T+
Sbjct: 170 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTY 229
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
+ ++ G + A + +EM RG P+ T+T L+DG CK G+ A M
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
I P+ VTY +I LCK EAR + +EM R PD ++D C+D ++
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 422 ALEIKKRMVE 431
A + ++M++
Sbjct: 350 ACGLWRKMLK 359
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
F L+ Y +G E R+ + + V + + L+N L + R D + +F
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 326 RR-GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
G+ PN T L+ CK ++ A K + G+ P+LVTY ++ G GD+
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTME 444
+ A+++L EM RG PD T+T LMDG CK G A + M + IE + V + +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 445 EVAMQKE 451
A+ KE
Sbjct: 303 IRALCKE 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
L K G A ++F L+ S L V I A + +D+A R + K N
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKV-IDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
L+ ++ K + + + E E G P + +N L+ G C+ G++ A ++
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
D++ +RK +P ++N LI G K+GNV+EG R+ M FP+ TF L GL K
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
+ ++A + +++G+ +L LKKF LD+G+ P
Sbjct: 484 GKEEDAMK--------------IVSMAVMNGKVDKESWELFLKKFAGELDKGVLP 524
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 143/272 (52%), Gaps = 2/272 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRL-VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
F+ LI Y G ++++ + + + +R + LQ R C L++ + +W +
Sbjct: 426 TFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYK 485
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSAR-LVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P V FN L + ++G +A ++ + K++P V + T+++GYC+ G
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+EE R M+ + P++F F++LI G + D + D M G+ P+ VTF+
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TL++ G + + + ML+ GI PD+ ++ L G + G+ ++A ++LN+M
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
G++P+ + +T ++ G C G+M+ A+++ K+M
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 157/323 (48%), Gaps = 3/323 (0%)
Query: 123 REAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR 182
R L+ L+ R A S+F + ++ + S++ + L++A T + I
Sbjct: 320 RSRTKLMNGLIERGRPQEAHSIFNTLIEE-GHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
V K L+ ++ + + + + ++ E G P FN L+ G+ K+G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 243 DIR-SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
+ S+RL+ + L+P + N L+ +C +EE + + M+S + PDV TF
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 302 SALINGLCK-ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+ L + S + + M + PN T T+++G C++GK++ AL+ F M
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
+ G+ P+L +N+LI G + D+ ++++ M G+KPD +TF+TLM+ GDM+
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 421 SALEIKKRMVEEGIELDAVAFTM 443
EI M+E GI+ D AF++
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSI 641
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCI--RLVRKKNLQIPLRACENLLRYMMKV 206
+Q+ + V+ F+ L AY G A I R++ K ++ +R C ++ +
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK-VKPNVRTCGTIVNGYCEE 544
Query: 207 KPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
+ F+ + E G P +++FN L+ GF + D+ V D + + ++P VV+F
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
+TL++ + G+++ + M I PD+ FS L G + ++A + ++M +
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD-QGIRPDLVTYNALINGLCKVGDLK 385
G+ PN V +T +I G C G++ A++ ++ M G+ P+L TY LI G +
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDG 412
+A +LL +M + + P + T + DG
Sbjct: 725 KAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS--FNTLISGYCKSGNVEEGFRLKGVME 290
V+ G GD+RS + + + +R RP FNTLI EEG +
Sbjct: 308 VICSGGTTCGDVRSRTKLMNGLIERG-RPQEAHSIFNTLI---------EEGHK------ 351
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
P + T++ L+ L ++ L ++ + GL P+ + F +I+ + G +D
Sbjct: 352 -----PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFTTL 409
A+K F+ M + G +P T+N LI G K+G L+E+ +LL+ M L+P+ T L
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ C +E A I +M G++ D V F
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+++ Y + G M++A++ +++ + L +L++ + + E + E
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P V F+ LM+ + VGD++ ++ ++ + + P + +F+ L GY ++G E+
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR-RGLVPNGVTFTTLID 341
++ M + P+V ++ +I+G C +A ++ +MC GL PN T+ TLI
Sbjct: 656 EQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW 715
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
G + + A + + M + + P T + +G +G
Sbjct: 716 GFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 21/242 (8%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G VY +N ++ CK I +A + E+ R + P +V+FNT +SGY G+V+
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK-- 477
Query: 283 FRLKGVMESERIF---PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++ GV+E + PDV TFS +IN LC+ +A F EM G+ PN +T+ L
Sbjct: 478 -KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I C G D ++K F M + G+ PDL YNA I CK+ +K+A +LL M GL
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 400 KPDKITFTTLMDGCCKDGDMESALEI--------------KKRMVEEGIELDAVAFTMEE 445
KPD T++TL+ + G A E+ KR+VEE ++L + E
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE-LDLRKSGLSRET 655
Query: 446 VA 447
V+
Sbjct: 656 VS 657
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 35/357 (9%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P R +++L V +KG + ++ + +V + +LI + +G +D+A++
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 181 IRLVRKKNLQI-----------------PLRACENLLRYMMK---VKPPG---------- 210
+ ++R + L P +A E L+ +M K ++ G
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSN 332
Query: 211 -----PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS 265
+ +F +I E GY P FN M K D+ +FD R ++P
Sbjct: 333 NSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG 392
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
+ L+ + EG R M + + V++++A+I+ LCK R + A EM
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
RG+ PN VTF T + G G V + +L G +PD++T++ +IN LC+ ++K
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+A EM G++P++IT+ L+ CC GD + ++++ +M E G+ D A+
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
S E EI + GY L VL+ + ++G + VF +I ++P+ +N +I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
KS +++ + M S+ PD FT++ LI+G+CK+ DEA L +M + G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL------CKVGDL- 384
N T+T LIDG G+VD ALK+ ++M + + P+ T ++G+ CK ++
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 385 ----------------------------KEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
KE + L ++ RG PD TF M K
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKG 368
Query: 417 GDMESALEIKKRMVEEGIE 435
D+ I V G++
Sbjct: 369 HDLVETCRIFDGFVSRGVK 387
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P ++A+I+ L K + D A F +M G P+ T+ LI G CK G VD A++
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+ M +G RP++ TY LI+G G + EA K L M R L P++ T T + G +
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 416 DGDMESALEIKKRMVEEGIEL-----DAVAFTMEEVAMQKE 451
A E+ +E+ L DAV + + +M KE
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKE 338
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 130 CFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL 189
C +R+ +A +F + +Q +++ F+ +S Y+ G + + +
Sbjct: 434 CLCKARRIENAA--MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGF 491
Query: 190 QIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ + ++ + + K +++ + E+LE G P +N+L+ C GD +
Sbjct: 492 KPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVK 551
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F ++ + L P + ++N I +CK V++ L M + PD FT+S LI L
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVT 335
+ R EA +F + R G VP+ T
Sbjct: 612 ESGRESEAREMFSSIERHGCVPDSYT 637
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G++P YNA+I+ L K L A +M + G KPD+ T+ L+ G CK G ++ A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 423 LEIKKRMVEEGIELDAVAFTM 443
+ + K+M +EG + +T+
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTI 255
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG 223
L++ + S + DAV + K ++ + L+ + K + P+ E + + G
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P V ++ L+ G CK G + A E+ +K+ P V++F+ LI Y K G + +
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+ +M I P+VFT+S+LI GLC +R DEA + D M +G PN VT++TL +G
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
K +VD +K M +G+ + V+ N LI G + G + A + M + GL P+
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
++ ++ G +G++E AL + M + +LD + +T+ M K C
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 121/224 (54%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
L++++ G P + + L++GFC I+ A V ++ K ++ VV LI CK+
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
V + M+ I P+V T+S+LI GLCK R +A EM + + PN +TF
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ LID K GK+ +++M+ I P++ TY++LI GLC + EA K+L+ M +
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+G P+ +T++TL +G K ++ +++ M + G+ + V+
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 90/149 (60%)
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I PD+ T S+L+NG C + +A ++ +M + G+ + V T LID CK+ V AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ + M D+GI P++VTY++LI GLCK G L +A + L+EM+++ + P+ ITF+ L+D
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFT 442
K G + + K M++ I+ + ++
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYS 157
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 102/187 (54%)
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
K + P +V+ ++L++G+C S ++++ + G ME I DV + LI+ LCK
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
A + M RG+ PN VT+++LI G CK G++ A ++ M + I P+++T++ALI
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ K G L + + M + P+ T+++L+ G C ++ A+++ M+ +G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 436 LDAVAFT 442
+ V ++
Sbjct: 186 PNVVTYS 192
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ F LI AY G + +++ + ++ + +L+ + + +
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G P V ++ L +GF K + + D++P+R + VS NTLI GY ++
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G ++ + G M S + P++ +++ ++ GL ++A F+ M + + +T+
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
T +I G CK V A F + + + PD Y +I L + G EA L
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M+ GI PD+VT ++L+NG C +K+A + +M G+K D + T L+D CK+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+ ALE+ KRM + GI + V ++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYS 87
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%)
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
+M + G+ P+ VT ++L++G C + A+ M GI+ D+V LI+ LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ A ++L M RG+ P+ +T+++L+ G CK G + A M + I + + F+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 47/322 (14%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F+ LI +Y ++G ++V+ + +++ + + +LL ++K G + + + E+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 221 EC-GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
G P Y FN L++GFCK + A +F ++ P VV++NT+I G C++G V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 280 EEGFR-LKGVME-SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ L G+++ + + P+V +++ L+ G C + DEA +F +M RGL PN VT+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 338 TLIDG-------------------------------------QCKDGKVDLALKKFQIML 360
TLI G C G +D A+K FQ ML
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL-------KPDKITFTTLMDGC 413
+ + PD +Y+ LI LC + A L NE+ + + KP + + +
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 414 CKDGDMESALEIKKRMVEEGIE 435
C +G + A ++ +++++ G++
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQ 462
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 129/237 (54%), Gaps = 5/237 (2%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLI 270
S + + + + G P V FN L+ K G A +FDE+ + + P +FNTLI
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG-- 328
+G+CK+ V+E FR+ ME PDV T++ +I+GLC+ + A+++ M ++
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ PN V++TTL+ G C ++D A+ F ML +G++P+ VTYN LI GL + E +
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Query: 389 KLLNEMNA--RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+L N PD TF L+ C G +++A+++ + M+ + D+ ++++
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 134/250 (53%), Gaps = 6/250 (2%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+L+ + +K P F+ + G+ K F +++ + ++ AR I +R
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRS 130
Query: 259 ---LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
++ FN+LI Y +G +E +L M+ I P V TF++L++ L K R+
Sbjct: 131 NGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTG 190
Query: 316 EANHLFDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
A+ LFDEM R G+ P+ TF TLI+G CK+ VD A + F+ M PD+VTYN +
Sbjct: 191 MAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTI 250
Query: 375 INGLCKVGDLKEARKLLNEM--NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
I+GLC+ G +K A +L+ M A + P+ +++TTL+ G C +++ A+ + M+
Sbjct: 251 IDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 310
Query: 433 GIELDAVAFT 442
G++ +AV +
Sbjct: 311 GLKPNAVTYN 320
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 49/383 (12%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
+ P +SLL L+ R G A LF +T F+ LI+ + + +D
Sbjct: 167 MGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE--CGYPPKVYLFNV 233
+A + + + + + ++ + + + +L+ P V +
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG--------------------- 272
L+ G+C +I A LVF ++ R L+P V++NTLI G
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 273 ----------------YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+C +G+++ ++ M + ++ PD ++S LI LC + D
Sbjct: 347 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 406
Query: 317 ANHLFDEMCRRGLV-------PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
A LF+E+ + ++ P + + + C +GK A K F+ ++ +G++ D
Sbjct: 407 AETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPP 465
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+Y LI G C+ G K A +LL M R PD T+ L+DG K G+ A + +RM
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 430 VEEGIELDAVAF--TMEEVAMQK 450
+ A F + E+A +K
Sbjct: 526 LRSSYLPVATTFHSVLAELAKRK 548
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++LI A+ D+G +D A MKV + E+L
Sbjct: 356 FNILIKAHCDAGHLDAA--------------------------MKV---------FQEML 380
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL-------RPTVVSFNTLISGY 273
P ++VL+ C + A +F+E+ ++++ +P ++N +
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 274 CKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
C +G ++ ++ + +M+ R D ++ LI G C+E + A L M RR VP+
Sbjct: 441 CANGKTKQAEKVFRQLMK--RGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 498
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
T+ LIDG K G+ LA Q ML P T+++++ L K RK N
Sbjct: 499 LETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK-------RKFAN 551
Query: 393 E 393
E
Sbjct: 552 E 552
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 7/222 (3%)
Query: 211 PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
P++E + +L + P + + +L+ G K+G+ A + + P +F++++
Sbjct: 482 PAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
+ K E F L +M +RI ++ + ++ L ++ ++A + R L
Sbjct: 542 AELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF-----LIVRLLY 596
Query: 331 PNG--VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
NG V L+ C++ K+ A L++ D+ T N +I GLCK EA
Sbjct: 597 DNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAF 656
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
L NE+ G L + G E + KRM
Sbjct: 657 SLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMA 698
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 161/358 (44%), Gaps = 58/358 (16%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISA--YTDSGFMDDA-VQCIRLVRKKNLQI 191
+KG ++ ++ L + + L D ++ Y F + + +R + +L
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEIL------------------ECGYPPKVYLFNV 233
+ NL++ + +VKP + L +L G P +FN+
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 234 LMHGFCKVGDIRSARLVFDE-------------------------------------IPK 256
L+ CK GDI A LV +E I K
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+ P V+FN +I+G+C++G VE ++ M+ P+V+ +SAL+NG CK + E
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A FDE+ + GL + V +TTL++ C++G+ D A+K M R D +TYN ++
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
GL G +EA ++L++ + G+ +K ++ +++ C +G++E A++ M E GI
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 116/208 (55%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P VY ++ LM+GFCKVG I+ A+ FDE+ K L+ V + TL++ +C++G +E
Sbjct: 298 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 357
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L G M++ R D T++ ++ GL E RS+EA + D+ G+ N ++ +++
Sbjct: 358 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 417
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C +G+++ A+K +M ++GI P T+N L+ LC+ G + ++L GL P
Sbjct: 418 LCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPG 477
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMV 430
++ +++ CK+ + E+ +V
Sbjct: 478 PKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 150 QTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC-ENLLRYMMKVKP 208
+ Q + +F++L+ + +G ++ A + +++ + P L+ +
Sbjct: 188 HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 209 PGPSWEFYLEIL-ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ E + +++ + G P FNV+++GFC+ G++ A+ + D + K P V +++
Sbjct: 248 SKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
L++G+CK G ++E + ++ + D ++ L+N C+ +DEA L EM
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
+ +T+ ++ G +G+ + AL+ +G+ + +Y ++N LC G+L++A
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
K L+ M+ RG+ P T+ L+ C+ G E + +
Sbjct: 428 VKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF + + F+V+I+ + +G ++ A + + ++K + L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
KV + + + E+ + G + LM+ FC+ G+ A + E+ + R
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
+++N ++ G G EE ++ SE + + ++ ++N LC ++A
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
M RG+ P+ T+ L+ C+ G ++ ++ L G+ P ++ A++ +CK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 381 VGDLKEARKLLNEM 394
L +LL+ +
Sbjct: 491 ERKLVHVFELLDSL 504
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + E+ + P ++NV++ G C G++ +A ++ KR + P V ++NTLIS
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
CK G +E L G M++ + PD ++ +I GLC + AN M + L+P
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEV 405
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+ + +IDG + G AL +ML G++P++ T NALI+G K G L +A + NE
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M + + PD T+ L+ C G + A ++ M+ G + D + +T
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 7/239 (2%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++ G P + N L++G CK G I A + E+ + P VS+NTLI G C
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN-HLFDEM--CRRGLVPNGV 334
NV++ L M I P+ T + +++ LC++ N L +E+ + P +
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 335 TFTTLIDGQC-KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T++ C K+G V AL+ ++ M + + D V YN +I GLC G++ A + +
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
M RG+ PD T+ TL+ CK+G + A ++ M G+ D +++ +V +Q C
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY---KVIIQGLC 381
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+V++V+I SG M A + + K+ + + L+ + K + + +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ G P + V++ G C GD+ A + K L P V+ +N +I GY + G+
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ +M S + P+V+T +ALI+G K R +A + +EM + P+ T+
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+ C G + LA + + ML +G +PD++TY L+ GLC G LK+A LL+ + A G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 399 LKPDKITFTTL 409
+ D + F L
Sbjct: 541 ITIDHVPFLIL 551
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
++++ C G ++ L+ M + P + T + L+NGLCK ++A+ L EM
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL-K 385
G PN V++ TLI G C VD AL F M GIRP+ VT N +++ LC+ G +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 386 EARKLLNEM--NARGLKP-DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+KLL E+ +++ P D + T LMD C K+G++ ALE+ K M ++ + D+V +
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 443 M 443
+
Sbjct: 305 V 305
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
VL+++V+I Y G A+ + L+ ++ + L+ +K +W
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ P +N+L+ C +G +R A ++DE+ +R +P ++++ L+ G C G
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
+++ L +++ I D F L + R EA
Sbjct: 525 RLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 36/255 (14%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y E+LE P +Y FN L++G+CK+G + A+ + + P ++ + I+G+C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 275 KSGNVEEGFR--------------------LKGVMESERI---------------FPDVF 299
+ V+ F+ + G+ E+++I P+V
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
T++ LI+ LC + EA +LF +M G+ P+ +T LI C +D A + M
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
L+ G+ P+++TYNALI G CK ++ +A LL++M + L PD IT+ TL+ G C G++
Sbjct: 322 LENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 420 ESALEIKKRMVEEGI 434
+SA + M E G+
Sbjct: 381 DSAYRLLSLMEESGL 395
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
PK Y N L+ + G + + ++ E+ + + P + +FNTL++GYCK G V E +
Sbjct: 120 PKCY--NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
+ PD FT+++ I G C+ D A +F EM + G N V++T LI G +
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFE 237
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
K+D AL M D P++ TY LI+ LC G EA L +M+ G+KPD
Sbjct: 238 AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCM 297
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+T L+ C ++ A + + M+E G+ + + +
Sbjct: 298 YTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
K KL P +N L+S + G VEE RL M + + PD++TF+ L+NG CK
Sbjct: 115 KYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
EA + + G P+ T+T+ I G C+ +VD A K F+ M G + V+Y LI
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
GL + + EA LL +M P+ T+T L+D C G A+ + K+M E GI+
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
Query: 436 LDAVAFTMEEVAMQKEC 452
D +T V +Q C
Sbjct: 293 PDDCMYT---VLIQSFC 306
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ F+ L++ Y G++ +A Q + + + + + + K +++ +
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G + L++G + I A + ++ P V ++ LI C SG
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E L M I PD ++ LI C DEA+ L + M GL+PN +T+
Sbjct: 275 QKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI G CK V A+ ML+Q + PDL+TYN LI G C G+L A +LL+ M
Sbjct: 335 ALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Query: 398 GLKPDKIT 405
GL P++ T
Sbjct: 394 GLVPNQRT 401
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 36/343 (10%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
+ K H +A L+ L+ +V +++IS + G +DD ++ +++ +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
L +L+ + + + E+ E V +N ++ GFC+ G I+ + L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES-LEL 347
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEG---FRLK---------------------- 286
I + K +VS+N LI G ++G ++E +RL
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 287 -------GVM---ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GVM ES DV+ ++++I+ LCK+ R +EA++L EM + G+ N
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI G +D ++ A + M G RP +V+YN LI GLCK G EA + EM
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
G KPD T++ L+ G C+D ++ ALE+ + ++ G+E D +
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 159/353 (45%), Gaps = 38/353 (10%)
Query: 128 LLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
+L L S K +A +LF S + S +V+ ++ +++ ++ + + L+R +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 188 NLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC-GYPPKVYLFNVLMHGFCKVGDIRS 246
+ ++++ K P + + + + E G P + +N L++ F +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
+F + P + ++N LI CK E+ M E PDVF++S +IN
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 307 GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD-------------------- 346
L K + D+A LFDEM RG+ P+ + LIDG K+
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 347 ----------------GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
G+VD LK ++ M DL TY++LI+GLC G++ +A +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
NE++ R D +T+ T++ G C+ G ++ +LE+ R++E ++ V++ +
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNI 364
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ + I +G+++ A+ ++ V + + A +++ + K K + E+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ G ++ N L+ G + + A E+ K RPTVVS+N LI G CK+G
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E M PD+ T+S L+ GLC++ + D A L+ + + GL + + LI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
G C GK+D A+ M + +LVTYN L+ G KVGD A + M GL+
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
PD I++ T+M G C + A+E GI
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 37/337 (10%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A S+F L V+ ++ ++ + G + ++++ R++ KN + + + L+
Sbjct: 309 AESVFNE-LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILI 366
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ +++ + + + GY + + +HG C G + A V E+
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRL--------------------KGVMESERIF----- 295
V ++ ++I CK +EE L G++ R+
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 296 ----------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
P V +++ LI GLCK + EA+ EM G P+ T++ L+ G C+
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
D K+DLAL+ + L G+ D++ +N LI+GLC VG L +A ++ M R + +T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ TLM+G K GD A I M + G++ D +++
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%)
Query: 174 MDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNV 233
+++A ++ + K +++ C L+ +++ G + F E+ + G P V +N+
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L+ G CK G A E+ + +P + +++ L+ G C+ ++ L
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
+ DV + LI+GLC + D+A + M R N VT+ TL++G K G + A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+ M G++PD+++YN ++ GLC + A + ++ G+ P T+ L+
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
K G + F E+LE G+ P + +++L+ G C+ I A ++ + + L V+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
N LI G C G +++ + ME ++ T++ L+ G K S+ A ++ M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+ GL P+ +++ T++ G C V A++ F + GI P + T+N L+ +
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 142 SSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLR 201
+S F + + +V+ +++LI +G +A ++ + + + L+ LL
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 202 YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRP 261
+ + + + E + + L+ G V + N+L+HG C VG + A V + R
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 262 TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
+V++NTL+ G+ K G+ + G M + PD+ +++ ++ GLC A F
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 322 DEMCRRGLVPNGVTFTTLI 340
D+ G+ P T+ L+
Sbjct: 663 DDARNHGIFPTVYTWNILV 681
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 1/152 (0%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
+P + LLC L + A L+ FLQ+ + V++ ++LI G +DDA+
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQS-GLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ + +N L L+ KV + + + + G P + +N +M G
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
C + A FD+ + PTV ++N L+
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 41/360 (11%)
Query: 115 WLATRPPFREAH----SLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTD 170
W +P + ++ S++ L + G+ L +T P +F VL+ +
Sbjct: 120 WATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFAS 179
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYL 230
+ + AV+ + + K L+ LL + K + + + ++ E +PP +
Sbjct: 180 ANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRY 238
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM- 289
F L++G+C+ G + A+ V ++ + L P +V F L+SGY +G + + + L M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 290 --------------------------ESERIF---------PDVFTFSALINGLCKESRS 314
E+ R+F D+ T++ALI+G CK
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+ + D+M ++G++P+ VT+ ++ K + + L+ + M +G PDL+ YN +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I CK+G++KEA +L NEM A GL P TF +++G G + A K MV GI
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 2/227 (0%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G P Y+F L+ CK G ++ A VF+++ + K P + F +L+ G+C+ G
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREG 250
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ E + M+ + PD+ F+ L++G + +A L ++M +RG PN +T
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 338 TLIDGQCK-DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
LI C+ + ++D A++ F M G D+VTY ALI+G CK G + + +L++M
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+G+ P ++T+ +M K E LE+ ++M G D + + +
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 7/260 (2%)
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVY---LFNVLMHGFCKVGDIRSARLVFD 252
C++++ + K++ G W E+ + P++ LF VLM F ++ A V D
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLD 191
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
E+PK L P F L+ CK+G+V+E ++ M E+ P++ F++L+ G C+E
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREG 250
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ EA + +M GL P+ V FT L+ G GK+ A M +G P++ Y
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 373 ALINGLCKVGD-LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
LI LC+ + EA ++ EM G + D +T+T L+ G CK G ++ + M +
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 432 EGIELDAVAFTMEEVAMQKE 451
+G+ V + VA +K+
Sbjct: 371 KGVMPSQVTYMQIMVAHEKK 390
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
PP + L + R+G + ++ + ++VF L+S Y +G M DA
Sbjct: 233 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 292
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+ +RK+ G+ P V + VL+ C
Sbjct: 293 LMNDMRKR-----------------------------------GFEPNVNCYTVLIQALC 317
Query: 240 KVGD-IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ + A VF E+ + +V++ LISG+CK G +++G+ + M + + P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T+ ++ K+ + +E L ++M RRG P+ + + +I CK G+V A++ +
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL--KPDKITFTTLMDGCCKD 416
M G+ P + T+ +ING G L EA EM +RG+ P T +L++ +D
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Query: 417 GDMESALEI 425
+E A ++
Sbjct: 498 DKLEMAKDV 506
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 16/237 (6%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYM--MKVKPPGPS 212
+ ++ + LIS + G +D + +RKK + +P + + YM M
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV-MP-----SQVTYMQIMVAHEKKEQ 392
Query: 213 WEFYLEILEC----GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+E LE++E G P + ++NV++ CK+G+++ A +++E+ L P V +F
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIF--PDVFTFSALINGLCKESRSDEANHLFDEMCR 326
+I+G+ G + E M S IF P T +L+N L ++ + + A ++ +
Sbjct: 453 MINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISN 512
Query: 327 R--GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+ N +T I G V A M++ + P TY L+ GL K+
Sbjct: 513 KTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 8/335 (2%)
Query: 115 WLATRPPFREAHSLLCF--LVSRKGHGSASSLFASFL----QTMPTQQSVLVFDVLISAY 168
W P F AHSL + LV G +L FL + + S VF ++ AY
Sbjct: 91 WARRIPDF--AHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAY 148
Query: 169 TDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKV 228
+ + +A + + + ++ + + LL + K + EF+ + G P
Sbjct: 149 SRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSA 208
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+++L+ G+ ++ D AR VFDE+ +R ++++N L+ CKSG+V+ G+++
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M + + PD ++F+ I+ C A + D M R LVPN TF +I CK+ K
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
VD A M+ +G PD TYN+++ C ++ A KLL+ M+ PD+ T+
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++ + G + A EI + M E +T+
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+R +++ + + + E+LE + +N L+ CK GD+ +F E+
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
L+P SF I YC +G+V +++ M+ + P+V+TF+ +I LCK + D+A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
L DEM ++G P+ T+ +++ C +V+ A K M PD TYN ++ L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC-KDGDMESALEIKKRMVEEGI 434
++G A ++ M+ R P T+T ++ G K G +E A + M++EGI
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 6/308 (1%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLF--ASFLQTMPTQQSVLVFDVLISAYTDSGF 173
+P + LL L +K A F A +P+ ++ + +L+ +
Sbjct: 167 FGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKT---YSILVRGWARIRD 223
Query: 174 MDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNV 233
A + + ++N + L A LL + K ++ + E+ G P Y F +
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
+H +C GD+ SA V D + + L P V +FN +I CK+ V++ + L M +
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
PD +T+++++ C + A L M R +P+ T+ ++ + G+ D A
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLC-KVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ ++ M ++ P + TY +I+GL K G L+EA + M G+ P T L +
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 413 CCKDGDME 420
G M+
Sbjct: 464 LVGWGQMD 471
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 133/250 (53%), Gaps = 35/250 (14%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
EF+ ++ P ++ + ++++ +C++ + + A +F+++ +R ++P VV+++ L+
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL--- 677
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
N + +K ME+ + PDV ++ +IN C + + LF +M RR +VP+
Sbjct: 678 ----NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDV 733
Query: 334 VTFTTL----------------------------IDGQCKDGKVDLALKKFQIMLDQGIR 365
VT+T L ID QCK G + A + F M++ G+
Sbjct: 734 VTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVD 793
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
PD Y ALI CK+G LKEA+ + + M G+KPD + +T L+ GCC++G + A+++
Sbjct: 794 PDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKL 853
Query: 426 KKRMVEEGIE 435
K M+E+GI+
Sbjct: 854 VKEMLEKGIK 863
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 3/256 (1%)
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
LV K +L I R L Y M+++ + L++ + G P VY+++ ++ G K
Sbjct: 284 LVDKSDLGIAYRKVVRGLCYEMRIED---AESVVLDMEKHGIDPDVYVYSAIIEGHRKNM 340
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
+I A VF+++ K++ R V ++++ YC+ GN E + L I D ++
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
+ L K + +EA LF EM +G+ P+ + +TTLI G C GK A M
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G PD+V YN L GL G +EA + L M RG+KP +T +++G G+++ A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 423 LEIKKRMVEEGIELDA 438
+ + + E DA
Sbjct: 521 EAFYESLEHKSRENDA 536
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V + ++++ +C + D++ +F ++ +R++ P VV++ L+ + E
Sbjct: 696 PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE---- 751
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M++ + PDVF ++ LI+ CK EA +FD+M G+ P+ +T LI CK
Sbjct: 752 ---MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G + A F M++ G++PD+V Y ALI G C+ G + +A KL+ EM +G+KP K +
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Query: 406 FTTL 409
+ +
Sbjct: 869 LSAV 872
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+++ ++ G C +E+ + ME I PDV+ +SA+I G K +A +F++
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
M ++ N V ++++ C+ G A F+ + I D V YN + L K+G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++EA +L EM +G+ PD I +TTL+ GCC G A ++ M G D V + +
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 135/351 (38%), Gaps = 64/351 (18%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
V V+ +I + + + AV + KK +I ++L+ ++ +++ +
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 384
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E E +NV K+G + A +F E+ + + P V+++ TLI G C
Sbjct: 385 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 444
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + F L M+ PD+ ++ L GL + EA M RG+ P VT
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Query: 337 TTLIDGQ-------------------------------CKDGKVDLALKKF--------- 356
+I+G C G +D A ++F
Sbjct: 505 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPK 564
Query: 357 --------------------QIMLDQ----GIRPDLVTYNALINGLCKVGDLKEARKLLN 392
Q +LD+ G+ P+ Y LI C+V ++++AR+
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + + PD T+T +++ C+ + + A + + M ++ D V +++
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSV 675
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 45/270 (16%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV--FDEIPKRKLRPTVVSFNTLISG 272
F+ G P + N L+ G RS +V F EI + L ++ ++
Sbjct: 169 FFRAYYSLGRAPDIKALNFLISRMIASG--RSDMVVGFFWEIERLGLDADAHTYVLVVQA 226
Query: 273 YCKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
++ + EE +L ++ SE P VF + I GLC +D A L + ++
Sbjct: 227 LWRNDDKEELEKLLSRLLISETRNPCVFYLN-FIEGLCLNQMTDIAYFLLQPLRDANILV 285
Query: 332 N----GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING---------- 377
+ G+ + ++ G C + +++ A M GI PD+ Y+A+I G
Sbjct: 286 DKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKA 345
Query: 378 -------------------------LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
C++G+ EA L E + D++ + D
Sbjct: 346 VDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDA 405
Query: 413 CCKDGDMESALEIKKRMVEEGIELDAVAFT 442
K G +E A+E+ + M +GI D + +T
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+ + K+ G + + +++E G P + L+ CK+G ++ A+++FD + +
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
++P VV + LI+G C++G V + +L M + I P + SA+
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 167/363 (46%), Gaps = 42/363 (11%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP +LL + +K +GS SS+ + Q+ T+ + F+ +I+A+++SG M+DAV
Sbjct: 77 RPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFFNAVINAFSESGNMEDAV 135
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG---YPPKVYLFNVLM 235
Q + +++ L L++ P S E +LE G P + FNVL+
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL-------------------------- 269
+CK + A V ++ + +RP V++NT+
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 270 -----------ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
+ GYC+ G V +G R M+ R+ ++ F++LING + D +
Sbjct: 256 AKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+ M + + +T++T+++ G ++ A + F+ M+ G++PD Y+ L G
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
+ + K+A +LL + +P+ + FTT++ G C +G M+ A+ + +M + G+ +
Sbjct: 376 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 439 VAF 441
F
Sbjct: 435 KTF 437
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 40/285 (14%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
LL M K G E+ + G FN +++ F + G++ A ++ +
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG 145
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE---RIFPDVFTFSALINGLCKESRSD 315
L PT ++NTLI GY +G E L +M E + P++ TF+ L+ CK+ + +
Sbjct: 146 LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 316 EANHLFDEMCRRGLVPNGVTFTTL------------------------------------ 339
EA + +M G+ P+ VT+ T+
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI 265
Query: 340 -IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+ G C++G+V L+ + M + + +LV +N+LING +V D ++L M
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECN 325
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+K D IT++T+M+ G ME A ++ K MV+ G++ DA A+++
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+R+ L+ +++ P + + + E G+ P + + L+ S +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
E+ + + + FN +I+ + +SGN+E+ + M+ + P T++ LI G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 313 RSDEANHLFDEMCRRGLV---PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ + ++ L D M G V PN TF L+ CK KV+ A + + M + G+RPD V
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 370 TYNALINGLCKVGDLKEARKLLNE--MNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
TYN + + G+ A + E + KP+ T ++ G C++G + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 428 RMVEEGIELDAVAF 441
RM E +E + V F
Sbjct: 285 RMKEMRVEANLVVF 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+++ Y G + D ++ +R +++ ++ L +L+ ++V E + EC
Sbjct: 265 IVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKEC 324
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
V ++ +M+ + G + A VF E+ K ++P +++ L GY ++ ++
Sbjct: 325 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 384
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L + E P+V F+ +I+G C D+A +F++MC+ G+ PN TF TL+ G
Sbjct: 385 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ + A + Q+M G++P+ T+ L G E+ K +N + + ++
Sbjct: 444 YLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIA 503
Query: 403 KI 404
K+
Sbjct: 504 KL 505
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + +++A++ +G+M+ A Q + + K ++ A L + ++ K P + E L
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-L 388
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E L P V +F ++ G+C G + A VF+++ K + P + +F TL+ GY +
Sbjct: 389 ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE-- 446
Query: 278 NVEEGFRLKGVMESER---IFPDVFTFSALINGLCKESRSDEANHLFDEM 324
V++ ++ + V++ R + P+ TF L +DE+N + +
Sbjct: 447 -VKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 137/271 (50%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
+F LI Y +G +D A+ + + +++ L+ ++ + F+
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ P FN+L+ GF D +A VFDE+ + +++P+VV++N+LI C++ ++
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+ L M +RI P+ TF L+ GLC + +EA L +M RG P V + L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ K G++D A M + I+PD+V YN L+N LC + EA ++L EM +G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
KP+ T+ ++DG C+ D +S L + M+
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 2/326 (0%)
Query: 118 TRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDA 177
TR P+ E L L + A SLF + Q M + + LI S D
Sbjct: 43 TRKPWEEV-PFLTDLKEIEDPEEALSLFHQY-QEMGFRHDYPSYSSLIYKLAKSRNFDAV 100
Query: 178 VQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHG 237
Q +RLVR +N++ L+++ K + + + +I + N L++
Sbjct: 101 DQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINV 160
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
G++ A+ FD +LRP VSFN LI G+ + E ++ M + P
Sbjct: 161 LVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS 220
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
V T+++LI LC+ +A L ++M ++ + PN VTF L+ G C G+ + A K
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M +G +P LV Y L++ L K G + EA+ LL EM R +KPD + + L++ C +
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTEC 340
Query: 418 DMESALEIKKRMVEEGIELDAVAFTM 443
+ A + M +G + +A + M
Sbjct: 341 RVPEAYRVLTEMQMKGCKPNAATYRM 366
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 213 WE----FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
WE + E+LE P V +N L+ C+ D+ A+ + +++ K+++RP V+F
Sbjct: 202 WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGL 261
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L+ G C G E +L ME P + + L++ L K R DEA L EM +R
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ V + L++ C + +V A + M +G +P+ TY +I+G C++ D
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+LN M A P TF ++ G K G+++ A + + M ++ + + A+
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAW 434
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
++L+ LV A S F + M + + + F++LI + D + A + +
Sbjct: 155 NTLINVLVDNGELEKAKSFFDG-AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
+ +Q + +L+ ++ + G + ++++ P F +LM G C G+
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
A+ + ++ R +P +V++ L+S K G ++E L G M+ RI PDV ++ L+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
N LC E R EA + EM +G PN T+ +IDG C+ D L ML
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC 393
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM-DGCCKDG 417
P T+ ++ GL K G+L A +L M + L + L+ D C KDG
Sbjct: 394 PTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 149/294 (50%), Gaps = 2/294 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
F ++ +Y+ +G + DA++ + L+++ ++ L C + ++ + F +
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
G P V +N ++ G+C + + A + +++ + P VS+ T++ CK +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 280 EEGFRLKGVMESER-IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E L M E + PD T++ LI+ L K +DEA + +G + + ++
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++ CK+G++ A ML +G PD+VTY A++NG C++G++ +A+KLL M+
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
G KP+ +++T L++G C+ G A E+ E +++ +++ +++E
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 142/284 (50%), Gaps = 1/284 (0%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ ++ LI T D+A+ ++ ++K +I ++ + K + + E
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 219 ILECGY-PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+L G+ PP V + +++GFC++G++ A+ + + +P VS+ L++G C++G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E + + E P+ T+S +++GL +E + EA + EM +G P V
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ C+DG+ A K + L++G ++V + +I+G C+ +L A +L++M
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
D T+TTL+D K G + A E+ K+M+ +GI+ V +
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY 667
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 145/286 (50%), Gaps = 8/286 (2%)
Query: 165 ISAYTDSGFM--DDAVQCIRLVRKKNLQ----IPLRACENLLRYMM-KVKPPGPSWEFYL 217
+S YT G++ + + +R + KK + +P + N L +M+ K + F
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE-IPKRKLRPTVVSFNTLISGYCKS 276
+ E G+ ++ ++H CK G + A+ + +E + K P VV++ +++G+C+
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V++ +L VM + P+ +++AL+NG+C+ +S EA + + PN +T+
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ ++ G ++GK+ A + M+ +G P V N L+ LC+ G EARK + E
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+G + + FTT++ G C++ ++++AL + M D +T
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 633
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G+ P N+L+ C+ G AR +E + VV+F T+I G+C++
Sbjct: 549 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 608
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + M DVFT++ L++ L K+ R EA L +M +G+ P VT+
Sbjct: 609 ELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYR 668
Query: 338 TLIDGQCKDGKVDLALKKFQIMLD-QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+I C+ GKVD + + M+ Q R YN +I LC +G L+EA LL ++
Sbjct: 669 TVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLR 725
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ D T LM+G K G SA ++ RM
Sbjct: 726 TASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + Y ++ ++ K + +R V + +R + T +F+ ++ Y
Sbjct: 194 FYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYS 253
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++G + + ++ +M+ + P++ + I+ + +R ++A + M G+VPN V
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ +I G C +V+ A++ + M +G PD V+Y ++ LCK + E R L+ +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 395 -NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
GL PD++T+ TL+ K + AL K E+G +D + ++ A+ KE
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 123/299 (41%), Gaps = 8/299 (2%)
Query: 140 SASSLFASFLQTMPTQQ----SVLVFDVLISAYTDSGFMDDAVQCIR-LVRKKNLQIPLR 194
+ SL A + M + + + + V++ G + +A +R +V K P+
Sbjct: 502 TGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 561
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
LL+ + + + +F E L G V F ++HGFC+ ++ +A V D++
Sbjct: 562 -INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
V ++ TL+ K G + E L M + I P T+ +I+ C+ +
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKV 680
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+ + ++M R + +I+ C GK++ A +L R D T AL
Sbjct: 681 DDLVAILEKMISRQKCR--TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYAL 738
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ G K G A K+ M R L PD L G ++ A ++ R+VE G
Sbjct: 739 MEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 4/333 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVL---VFDVLISAYTDS 171
+ + +P FR + S L+ + G G +L L + L +F LI Y ++
Sbjct: 73 YASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEA 132
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPP-GPSWEFYLEILECGYPPKVYL 230
+ + + + N + +L ++ + ++E + G P
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+LM FC D+ A +F ++ +R + P V S+ LI G+C+ G V L M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++ PD +++ L+N LC++++ EA L M +G P+ V + T+I G C++ +
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A K ML G P+ V+Y LI GLC G E +K L EM ++G P L+
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
G C G +E A ++ + +++ G L + + M
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
+ DVL+S G++ A + + R + R+ L++ +++ + ++
Sbjct: 160 ILDVLVS---HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
LE P V + +L+ GFC+ G + A + D++ + P +S+ TL++ C+ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E ++L M+ + PD+ ++ +I G C+E R+ +A + D+M G PN V++ TL
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I G C G D K + M+ +G P N L+ G C G ++EA ++ + G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
T+ ++ C + + E + V+E I D
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 4/275 (1%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQI-PLRACEN-LLRYMMKVKPPGPSWEFYLE 218
F++LI ++G D V+ + ++ K P + N +L ++ VK Y +
Sbjct: 190 FNLLICTCGEAGLARDVVE--QFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQ 247
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+LE G+ P V +N++M ++G + DE+ K P + ++N L+
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
L M + P V F+ LI+GL + + + + DE + G P+ V +T
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G G+++ A + F+ M ++G P++ TYN++I G C G KEA LL EM +RG
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
P+ + ++TL++ G + A E+ K MVE+G
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 1/252 (0%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP +++L L+ K + ++ L+ T VL +++++ A G D
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPD-VLTYNIVMFANFRLGKTDRLY 277
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ + + K L LL ++ P + + E G P V F L+ G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ G + + + DE K P VV + +I+GY G +E+ + M + P+V
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
FT++++I G C + EA L EM RG PN V ++TL++ GKV A + +
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 359 MLDQGIRPDLVT 370
M+++G L++
Sbjct: 458 MVEKGHYVHLIS 469
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG---NVEEGFRLKG 287
+++LM F + G+ ++ + DE+ K T +FN LI ++G +V E F +K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF-IKS 213
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
+ R P +++A+++ L + + ++++M G P+ +T+ ++ + G
Sbjct: 214 KTFNYR--PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
K D + M+ G PDL TYN L++ L A LLN M G++P I FT
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
TL+DG + G +E+ V+ G D V +T+
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG 223
+ISA DSG +A +R+ ++ RA LL+ +K P + E+ + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P + +++L+ + G SAR+V E+ ++P F+ L++G+ G ++ F
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
++ M+S + PD ++ +I+ K + D A FD M G+ P+ VT+ TLID
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
CK G+ +A + F+ M +G P TYN +IN + ++LL +M ++G+ P+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+T TTL+D K G A+E + M G++
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 6/286 (2%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
+ +LI AY ++G + A ++ + ++Q LL +++ E+
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN- 278
G P +NV++ F K + A FD + + P V++NTLI +CK G
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 279 --VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
EE F ME P T++ +IN + R D+ L +M +G++PN VT
Sbjct: 496 IVAEEMFE---AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TTL+D K G+ + A++ + M G++P YNALIN + G ++A M +
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
GLKP + +L++ +D A + + M E G++ D V +T
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 2/330 (0%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P +SLL G ++ + ++ Q + VF L++ + D G Q
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 181 IRLVRKKNLQIPLRACENL-LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
++ ++ ++ P R N+ + K + + +L G P +N L+ C
Sbjct: 432 LKEMKSIGVK-PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K G A +F+ + +R P ++N +I+ Y ++ RL G M+S+ I P+V
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
T + L++ K R ++A +EM GL P+ + LI+ + G + A+ F++M
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
G++P L+ N+LIN + EA +L M G+KPD +T+TTLM +
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Query: 420 ESALEIKKRMVEEGIELDAVAFTMEEVAMQ 449
+ + + M+ G + D A +M A++
Sbjct: 671 QKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 7/287 (2%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
LV D+++ + SG A+Q + + + L +++ + + + E
Sbjct: 271 LVNDIIM-GFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 329
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ + G P+ +N L+ G+ K G ++ A + E+ KR + P +++ LI Y +G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E + ME+ + P+ F FS L+ G + + EM G+ P+ +
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+ID K +D A+ F ML +GI PD VT+N LI+ CK G A ++ M RG
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKK---RMVEEGIELDAVAFT 442
P T+ +++ GD E ++K+ +M +GI + V T
Sbjct: 510 CLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRL---VRKKNLQIPLRACENLLRYMMKVKPPGP 211
Q + + ++I + T S +D +V +RL + + L++ ++ +++ K P
Sbjct: 229 QSDFVNYSLVIQSLTRSNKID-SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + G K ++ G A +F+E+ + ++P ++N L+
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLK 347
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GY K+G +++ + ME + PD T+S LI+ R + A + EM + P
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
N F+ L+ G G+ + + M G++PD YN +I+ K L A
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ M + G++PD++T+ TL+D CK G A E+ + M G
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLV--FDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
GY +++++ + I S L+ + EI + KL V N +I G+ KSG+
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ +L G+ ++ + T ++I+ L R+ EA LF+E+ + G+ P + L+
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
G K G + A M +G+ PD TY+ LI+ G + AR +L EM A ++
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
P+ F+ L+ G G+ + ++ K M G++ D
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 14/312 (4%)
Query: 139 GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN 198
G + L+ +FL + + L ++ LI A + ++ A+ I +R+ Q +
Sbjct: 178 GRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQ------SD 231
Query: 199 LLRYMMKVKPPGPS--------WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV 250
+ Y + ++ S Y EI V L N ++ GF K GD A +
Sbjct: 232 FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQL 291
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
L + ++IS SG E L + I P ++AL+ G K
Sbjct: 292 LGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVK 351
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
+A + EM +RG+ P+ T++ LID G+ + A + M ++P+
Sbjct: 352 TGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
++ L+ G G+ ++ ++L EM + G+KPD+ + ++D K ++ A+ RM+
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 431 EEGIELDAVAFT 442
EGIE D V +
Sbjct: 472 SEGIEPDRVTWN 483
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 1/295 (0%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
L +K + S+L F++ P +S I Y + +D +++ R + K +
Sbjct: 90 LAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISR 149
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILEC-GYPPKVYLFNVLMHGFCKVGDIRSARLV 250
+++ LL + K + Y+E+ + G P + +N ++ FC+ G S+ +
Sbjct: 150 TVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSI 209
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
E+ ++ ++P SF +ISG+ +E ++ +M+ + V T++ I LCK
Sbjct: 210 VAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCK 269
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
+S EA L D M G+ PN VT++ LI G C + + A K F+IM+++G +PD
Sbjct: 270 RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
Y LI LCK GD + A L E + P +L++G KD +E A E+
Sbjct: 330 YFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 5/192 (2%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF---PDVFTFSALIN 306
VF ++ K ++ TV S N L+ + + +E R+ +E +++ PD+ T++ +I
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRV--YIEMPKMYGIEPDLETYNRMIK 195
Query: 307 GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
C+ + + + EM R+G+ PN +F +I G + K D K +M D+G+
Sbjct: 196 VFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNI 255
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+ TYN I LCK KEA+ LL+ M + G+KP+ +T++ L+ G C + D E A ++
Sbjct: 256 GVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLF 315
Query: 427 KRMVEEGIELDA 438
K MV G + D+
Sbjct: 316 KIMVNRGCKPDS 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F ++IS + D+ + + +++ + + I + ++ + K K + +L
Sbjct: 225 FGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGML 284
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P ++ L+HGFC D A+ +F + R +P + TLI CK G+ E
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
Query: 281 EGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
L K ME + P +L+NGL K+S+ +EA L ++
Sbjct: 345 TALSLCKESMEKNWV-PSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQI-PLRACEN-LLRYMMKVKPPGPSWEFYLE 218
F++LI + ++G AV ++ ++ K P + N +L ++ VK Y +
Sbjct: 187 FNLLICSCGEAGLAKQAV--VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQ 244
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+LE G+ P V +N+L+ ++G + +FDE+ + P ++N L+ K
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
M+ I P V ++ LI+GL + + + DEM + G P+ V +T
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G G++D A + F+ M +G P++ TYN++I GLC G+ +EA LL EM +RG
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
P+ + ++TL+ K G + A ++ + MV++G
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 9/286 (3%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL----QIPLRACENLLRYMMKVKPP-- 209
+LV +VL+ + + D+ +C +L + L Q R N +MK+
Sbjct: 105 SGLLVREVLVGILRNLSY-DNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECG 163
Query: 210 --GPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
W E+++ G+P FN+L+ + G + A + F + RP S+N
Sbjct: 164 EYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYN 223
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
+++ + + M + PDV T++ L+ + + D + LFDEM R
Sbjct: 224 AILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD 283
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G P+ T+ L+ K K AL M + GI P ++ Y LI+GL + G+L+
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ L+EM G +PD + +T ++ G G+++ A E+ + M +G
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
Y P + +N +++ V + V+ ++ + P V+++N L+ + G ++
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
RL M + PD +T++ L++ L K ++ A + M G+ P+ + +TTLIDG
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
+ G ++ M+ G RPD+V Y +I G G+L +A+++ EM +G P+
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ +++ G C G+ A + K M G + V ++
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 433
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 200 LRYMMKVKPPGPSWEFYLEI--LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
L Y K + ++ F+L EC + V +++LM F + G+ ++ + DE+ +
Sbjct: 120 LSYDNKARCAKLAYRFFLWSGEQEC-FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD 178
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME--SERIF---PDVFTFSALINGLCKES 312
T +FN LI C G E G + V++ + F P +++A++N L
Sbjct: 179 GFPTTARTFNLLI---CSCG--EAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ ++ +M G P+ +T+ L+ + GK+D + F M G PD TYN
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
L++ L K A LN M G+ P + +TTL+DG + G++E+ MV+
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 433 GIELDAVAFTM 443
G D V +T+
Sbjct: 354 GCRPDVVCYTV 364
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P + L+ C+ G A D++ +V+ I G K+ V+ G
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L + + PDV + LI LCK R+ EA+ LF+EM +GL P T+ ++IDG
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
CK+G++D L M + PD++TY +LI+GLC G EA NEM + P+
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPN 718
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ITF L+ G CK G AL + M E+ +E D+ +
Sbjct: 719 RITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + +I G+ P V ++VL+ CK A ++F+E+ + L+PTV ++N++I G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
CK G ++ G M + PDV T+++LI+GLC R EA ++EM + PN
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+TF LI G CK G AL F+ M ++ + PD Y +L++ ++ + E
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFRE 779
Query: 394 MNARGLKP 401
M +G P
Sbjct: 780 MVHKGRFP 787
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+++++ K + A + +I + L P + +N +I G CK G EE +L G M+
Sbjct: 442 LSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMK 501
Query: 291 SERIFPDVFTFSA-----------------------------------LINGLCKESRSD 315
+ P FT + L+ LC+ R+
Sbjct: 502 DAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAV 561
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
+A D++ G + + V T IDG K+ VD L+ F+ + G PD++ Y+ LI
Sbjct: 562 DACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLI 621
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
LCK EA L NEM ++GLKP T+ +++DG CK+G+++ L RM E+
Sbjct: 622 KALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN 681
Query: 436 LDAVAFT 442
D + +T
Sbjct: 682 PDVITYT 688
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 57/344 (16%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
VLI + +D A Q +R+ + + + L+ + K K + YLEI
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 223 GYPPKVYLFNVLMHGFCKVGDI-RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE 281
G PP + L+ F + ++ R ++ +I K+ + ++ + +L G+ ++ V E
Sbjct: 348 GIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHE 404
Query: 282 GF----RLKGVMESE--------------RIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+ L G ES+ I PD + S +IN L K ++ D A L +
Sbjct: 405 AYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHD 464
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA---------- 373
+ + GL+P + + +I+G CK+G+ + +LK M D G+ P T N
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524
Query: 374 -------------------------LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
L+ LC+ G +A K L+++ G + T
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
+DG K+ ++ LE+ + + G D +A+ + A+ K C
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 11/261 (4%)
Query: 115 WLATRPPFRE---AHSLLCFLVSR-KGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTD 170
W + + +R A++ + ++SR + + S +L L + S F I +
Sbjct: 95 WASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNS-RCFMSPGAFGFFIRCLGN 153
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF----YLEILECGYPP 226
+G +D+A VR+ L +P N L + K S E E+ +CG+
Sbjct: 154 AGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAIS-KSNSSSVELVEARLKEMRDCGFHF 212
Query: 227 KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
+ ++ +C G A VF+EI R +S L+ +CK G V++ F L
Sbjct: 213 DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELI 271
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
++E I + T+ LI+G KESR D+A LF++M R G+ + + LI G CK
Sbjct: 272 EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 347 GKVDLALKKFQIMLDQGIRPD 367
+++AL + + GI PD
Sbjct: 332 KDLEMALSLYLEIKRSGIPPD 352
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 222 CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL-RPTVVSFNTLISGYCKSGNVE 280
C P + F + G G + A VFD + + L P ++N L+ KS +
Sbjct: 137 CFMSPGAFGFFIRCLG--NAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSS 194
Query: 281 EGF---RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
RLK + + F D FT + ++ C +S+ A +F+E+ RG + ++ T
Sbjct: 195 VELVEARLKEMRDCGFHF-DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-T 252
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ CK G+VD A + +++ ++ IR + TY LI+G K + +A +L +M
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
G+ D + L+ G CK D+E AL + + GI
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
+++ ++ ++G S+++ + LQ V + LISA+ +SG +AV + + +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 187 KNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC-GYPPKVYLFNVLMHGFCKVGDI- 244
+ L +L K+ P +E ++ G P Y +N L+ CK G +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 245 RSARLVFDEI------------------------PKRKLR-----------PTVVSFNTL 269
+ A VF+E+ PK ++ P++V++N+L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
IS Y + G ++E LK M + PDVFT++ L++G + + + A +F+EM G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
PN TF I GK +K F + G+ PD+VT+N L+ + G E
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQ 449
+ EM G P++ TF TL+ + G E A+ + +RM++ G+ D + A+
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 450 K 450
+
Sbjct: 536 R 536
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 35/254 (13%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S++ ++ LISAY G +D+A++ KN
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMEL------KN---------------------------- 373
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ E G P V+ + L+ GF + G + SA +F+E+ +P + +FN I Y
Sbjct: 374 -QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G E ++ + + PD+ T++ L+ + E + +F EM R G VP TF
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI + G + A+ ++ MLD G+ PDL TYN ++ L + G +++ K+L EM
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 397 RGLKPDKITFTTLM 410
KP+++T+ +L+
Sbjct: 553 GRCKPNELTYCSLL 566
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ E+ E G+ P + N ++ + + + A V D + +R P++ ++N+L+ + +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
S + + + + ++ I PD+ +++ +I C+ +R +A+ +F EM G+VP+ +T
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ T I D + A+ + M+ G RP+ TYN++++G CK+ EA+ + ++
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL- 795
Query: 396 ARGLKP 401
R L P
Sbjct: 796 -RNLDP 800
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 8/329 (2%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQ--QSVL---VFDVLISAYTDSGFMD 175
P + LL FL H +F M + QS+L V ++IS G +
Sbjct: 131 PESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A +++ + + + +L+ + + ++ E G P + +NV++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 236 HGFCKVGD-IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV-EEGFRLKGVMESER 293
+ F K+G + +++ + P ++NTLI+ CK G++ +E ++ M++
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAG 309
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
D T++AL++ K R EA + +EM G P+ VT+ +LI +DG +D A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ M ++G +PD+ TY L++G + G ++ A + EM G KP+ TF +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFT 442
G ++I + G+ D V +
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 139/338 (41%), Gaps = 36/338 (10%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL 199
SA S+F ++ + ++ F+ I Y + G + ++ + L + L
Sbjct: 402 SAMSIFEE-MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 200 LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL 259
L + + E+ G+ P+ FN L+ + + G A V+ + +
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI----NG-------- 307
P + ++NT+++ + G E+ ++ ME R P+ T+ +L+ NG
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 308 LCKE--------------------SRSD---EANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L +E S+ D EA F E+ RG P+ T +++
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+ V A M ++G P + TYN+L+ + D ++ ++L E+ A+G+KPD I
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ T++ C++ M A I M GI D + +
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 134/333 (40%), Gaps = 53/333 (15%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK---------NLQIPLRACENLLRYMM 204
T+ V + L+S + +G ++ A+ +R N I + MM
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
K+ + EI CG P + +N L+ F + G VF E+ + P
Sbjct: 440 KI---------FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
+FNTLIS Y + G+ E+ + M + PD+ T++ ++ L + +++ + EM
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDL--------------------------------- 351
PN +T+ +L+ ++ L
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 352 --ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
A + F + ++G PD+ T N++++ + + +A +L+ M RG P T+ +L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M + D + EI + ++ +GI+ D +++
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E Y ++E P+ L L+ K + A F E+ +R P + + N+++S Y
Sbjct: 584 EVYSGVIE----PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
+ V + + M+ P + T+++L+ + + ++ + E+ +G+ P+
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+++ T+I C++ ++ A + F M + GI PD++TYN I +EA ++
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 394 MNARGLKPDKITFTTLMDGCCK 415
M G +P++ T+ +++DG CK
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCK 781
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPP-GPSWEFY 216
+ + ++S Y + A + ++++ P A N L YM G S E
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGF-TPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
EIL G P + +N +++ +C+ +R A +F E+ + P V+++NT I Y
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
EE + M P+ T++++++G CK +R DEA +++ R L P+
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNLDPHA 802
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 4/311 (1%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQTMPT---QQSVLVFDVLISAYTDSGFMDDAVQCIRL 183
L LV R L MP + VF L+ A G + DA +
Sbjct: 184 ELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFED 243
Query: 184 VRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD 243
+R + + LR +LL +V + +++ E G+ P + + L+ G+ G
Sbjct: 244 MRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK 302
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
+ A + ++ +R P + LI CK +EE ++ ME DV T++A
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L++G CK + D+ + D+M ++GL+P+ +T+ ++ K + L+ + M
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
PD+ YN +I CK+G++KEA +L NEM GL P TF +++G G + A
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 424 EIKKRMVEEGI 434
+ K MV G+
Sbjct: 483 DHFKEMVTRGL 493
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
LF VL+ F ++ A V DE+PK P F L+ CK G+V++ +L
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL---F 241
Query: 290 ESERI-FP-DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
E R+ FP ++ F++L+ G C+ + EA ++ +M G P+ V +T L+ G G
Sbjct: 242 EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAG 301
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
K+ A + M +G P+ Y LI LCKV ++EA K+ EM + D +T+T
Sbjct: 302 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 361
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
L+ G CK G ++ + M+++G+ + + VA +K+
Sbjct: 362 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK 405
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 38/304 (12%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG 223
L+S Y ++G M DA +R +R++ + L++ + KV + + ++E+
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS------------------ 265
V + L+ GFCK G I +V D++ K+ L P+ ++
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 266 -----------------FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGL 308
+N +I CK G V+E RL ME + P V TF +INGL
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 309 CKESRSDEANHLFDEMCRRGL--VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI-R 365
+ EA+ F EM RGL V T L++ KD K+++A + + +G
Sbjct: 473 ASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACE 532
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+++++ I+ L G KEA EM P TF LM G K + E A EI
Sbjct: 533 LNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEI 592
Query: 426 KKRM 429
+++
Sbjct: 593 TEKV 596
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
D A I L++ +N++I + L+R ++ + + + + G P F+++
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIV 227
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ + A+ FD + K + P V+ + L+ G+C++G + E ++ M+ I
Sbjct: 228 ISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI 286
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P+V+T+S +I+ LC+ + A+ +F +M G PN +TF L+ K G+ + L+
Sbjct: 287 EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQ 346
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
+ M G PD +TYN LI C+ +L+ A K+LN M + + + TF T+
Sbjct: 347 VYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIE 406
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFTM 443
K D+ A + +M+E E + V + +
Sbjct: 407 KKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 148 FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVK 207
+++ + S+ F +LI Y +G +AV C + +P + +++ + K
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC-VPDKIAFSIVISNLSRK 234
Query: 208 PPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ + + L+ + P V ++ L+ G+C+ G+I A VF E+ + P V +++
Sbjct: 235 RRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYS 294
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
+I C+ G + + M P+ TF+ L+ K R+++ ++++M +
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G P+ +T+ LI+ C+D ++ A+K M+ + + T+N + + K D+ A
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGA 414
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
++ ++M +P+ +T+ LM + L++KK M ++ +E
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N ++ KV A + D + R + ++ +F LI Y ++G E ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
PD FS +I+ L ++ R+ EA FD + R P+ + +T L+ G C+ G++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A K F+ M GI P++ TY+ +I+ LC+ G + A + +M G P+ ITF LM
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
K G E L++ +M + G E D + +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 144/316 (45%), Gaps = 4/316 (1%)
Query: 121 PFREAHSLLCFLVSRKGHGS-ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P + A S++ +SRK S A S F S + V+V+ L+ + +G + +A +
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+ ++ ++ + ++ + + + + + ++L+ G P FN LM
Sbjct: 277 VFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K G V++++ K P +++N LI +C+ N+E ++ M ++ +
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF+ + + K+ + A+ ++ +M PN VT+ L+ D+ LK + M
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFTTLMDGCCKDGD 418
D+ + P++ TY L+ C +G A KL EM + L P + ++ + G
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQ 516
Query: 419 MESALEIKKRMVEEGI 434
++ E+ ++M+++G+
Sbjct: 517 LKKHEELVEKMIQKGL 532
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 36/244 (14%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P +N+L+HG + G A +FDE+ K+K++PT V+F TLI G CK V+E ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 286 K-------GVMESERIFP-----------------------------DVFTFSALINGLC 309
K GV + I+ D +S LI+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
K RS+E + + +EM +G P+ VT+ LI+G C + + A + M+++G++PD++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+YN ++ ++ +EA L +M RG PD +++ + DG C+ E A I M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 430 VEEG 433
+ +G
Sbjct: 390 LFKG 393
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+++LI + SG DDA++ + KK ++ L+ + K + + ++L
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 221 EC-GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P V+++ L+ C++G++ A + DE + K++ ++TLIS K+G
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E + M + PD T++ LING C E+ S+ AN + DEM +GL P+ +++ +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ + K + A F+ M +G PD ++Y + +GLC+ +EA +L+EM +G
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
KP + + C+ G +E ++ + GI DA +++ M KE
Sbjct: 395 KPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKE 445
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE-RIFPDVFTFSALINGLCKESR 313
PKR R +++ ++ +I+ S +E ++ ++++ RI P F +IN +
Sbjct: 39 PKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKL 98
Query: 314 SDEANHLFDEM----CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
A H+FDEM C+R + + +C G+++ +K+ +D+ +PD
Sbjct: 99 PSRALHMFDEMPQYRCQRTV--KSLNSLLSALLKC--GELE-KMKERLSSIDEFGKPDAC 153
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYN LI+G + G +A KL +EM + +KP +TF TL+ G CKD ++ AL++K M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 430 VE 431
++
Sbjct: 214 LK 215
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 153/363 (42%), Gaps = 37/363 (10%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFM 174
WL + + L L G A SFL T + + + + ++ G +
Sbjct: 102 WLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLV 161
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
++A++ +++ + + C ++L +K + WE + E++E + + L
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE--RIRCL 219
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ C GD+ + + K+ L P + LISG+C+ GN + M +
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
FP ++ + +I GLC + EA +F + +G P+ V +TT+I G C+ G + A K
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 355 KFQIMLDQGIRPDLVTYNALING-----------------------------------LC 379
+ M+ +G+RP+ YN +I+G C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
G EA ++ M+ G+ P+ IT+ L+ G CK+ +E L++ K + G++ +
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 440 AFT 442
A+
Sbjct: 460 AYA 462
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 4/222 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P+ L + + G + A V++ + + +VV+ N+++ G K+ ++
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 283 FRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+ L K ++ESE D LI LC E L + ++GL P + LI
Sbjct: 200 WELHKEMVESEF---DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLIS 256
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G C+ G + M+ P + Y +I GLC EA + + +G P
Sbjct: 257 GFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
D++ +TT++ G C+ G + SA ++ M+++G+ + A+ +
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTM---PTQQSVLVFDVLISAYTDS 171
WL +P F+ +V G L M + + + ++ LI +Y +
Sbjct: 348 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA 407
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
++ +A+ +++ + L+ K + + Y + E G P + +
Sbjct: 408 NYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+V+++ K G + +A +F E+ + P +V+FN +I+ + K+ N E +L M++
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T+S ++ L +EA +F EM R+ VP+ + L+D K G VD
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + +Q ML G+RP++ T N+L++ +V + EA LL M A GL P T+T L+
Sbjct: 588 AWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Query: 412 GCCKD 416
CC D
Sbjct: 648 -CCTD 651
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P +N L+H + + ++ A VF+++ + P V++ TLI + K+G
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + M+ + PD FT+S +IN L K A+ LF EM +G PN VTF
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+I K + ALK ++ M + G +PD VTY+ ++ L G L+EA + EM +
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
PD+ + L+D K G+++ A + + M++ G+
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%)
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
++ T++ ++ E +L M + P+ T++ LI+ + + EA ++F++M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
G P+ VT+ TLID K G +D+A+ +Q M + G+ PD TY+ +IN L K G L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
A +L EM +G P+ +TF ++ K + E+AL++ + M G + D V +++
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + G+ + + ++ + + DE+ + +P V++N LI Y
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYG 405
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++ ++E + M+ PD T+ LI+ K D A ++ M GL P+
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T++ +I+ K G + A + F M+ QG P+LVT+N +I K + + A KL +M
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESA 422
G +PDK+T++ +M+ G +E A
Sbjct: 526 QNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 83/132 (62%)
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
IFP T++++I+G CK+ R D+A + D M +G P+ VTF+TLI+G CK +VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ F M +GI + VTY LI+G C+VGDL A+ LLNEM + G+ PD ITF ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 414 CKDGDMESALEI 425
C ++ A I
Sbjct: 126 CSKKELRKAFAI 137
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
PT +++N++I G+CK V++ R+ M S+ PDV TFS LING CK R D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F EM RRG+V N VT+TTLI G C+ G +D A M+ G+ PD +T++ ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 381 VGDLKEARKLLNEMN 395
+L++A +L ++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%)
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
M R + P +T+ ++IDG CK +VD A + M +G PD+VT++ LING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ ++ EM+ RG+ + +T+TTL+ G C+ GD+++A ++ M+ G+ D + F
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P +N ++ GFCK + A+ + D + + P VV+F+TLI+GYCK+ V+ G +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M I + T++ LI+G C+ D A L +EM G+ P+ +TF ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 346 DGKVDLALKKFQIMLD 361
++ K F I+ D
Sbjct: 128 KKEL---RKAFAILED 140
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
ML I P +TYN++I+G CK + +A+++L+ M ++G PD +TF+TL++G CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+++ +EI M GI + V +T
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYT 84
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P V F+ L++G+CK + + +F E+ +R + V++ TLI G+C+ G+++
Sbjct: 40 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 99
Query: 283 FRLKGVMESERIFPDVFTFSALINGLC--KESR----------SDEANHLFDE 323
L M S + PD TF ++ GLC KE R E +HL DE
Sbjct: 100 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 152
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ + ++ +I + +DDA + + + K + L+ K K E +
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ G + L+HGFC+VGD+ +A+ + +E+ + P ++F+ +++G C
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 277 GNVEEGFR-LKGVMESE 292
+ + F L+ + +SE
Sbjct: 129 KELRKAFAILEDLQKSE 145
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
N+L+ G C+ G++ +A + DE P++K RP V++F+ LI G+C G EE F+L ME
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
ERI PD TF+ LI+GL K+ R +E L + M +G PN T+ ++ G D K +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL-DKKRN 323
Query: 351 LALKKF-QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
L K+ M+ G+RP ++Y ++ GLC+ + E +L +M G P + +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPP-----GPSWE 214
++ ++I+ + + D+ + +R ++ L+ R E +M++ + E
Sbjct: 97 LYALMINKFGQAKMYDEIEEVMRTIK---LEKRCRFSEEFFYNLMRIYGNLAGRINRAIE 153
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ + G P FN +++ +F PK + N LI G C
Sbjct: 154 ILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLC 213
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+SGN+E +L ++ P+V TFS LI G C + + +EA L + M + + P+ +
Sbjct: 214 ESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTI 273
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
TF LI G K G+V+ + + M +G P+ TY ++ GL EA++++++M
Sbjct: 274 TFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ G++P +++ ++ G C+ + + ++MV G
Sbjct: 334 ISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 21/253 (8%)
Query: 195 ACENLLRYMMKVKPPG---PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
A +L+ VK P P+++ Y + Y P L+ ++++ F + ++
Sbjct: 61 APNEVLKIFDNVKDPSFLLPAYQHYSK--RKDYQPTESLYALMINKFGQAK-------MY 111
Query: 252 DEIPK--------RKLRPTVVSFNTLISGYCK-SGNVEEGFRLKGVMESERIFPDVFTFS 302
DEI + ++ R + F L+ Y +G + + M +P +F+
Sbjct: 112 DEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFN 171
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
++N L DE + +F + G+ + LI G C+ G ++ AL+ Q
Sbjct: 172 FILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQ 231
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
RP+++T++ LI G C G +EA KLL M ++PD ITF L+ G K G +E
Sbjct: 232 KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 423 LEIKKRMVEEGIE 435
+++ +RM +G E
Sbjct: 292 IDLLERMKVKGCE 304
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+ +N++ G I A + +P P+ SFN +++ + +E ++
Sbjct: 133 FFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS 192
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
+ D + LI GLC+ + A L DE ++ PN +TF+ LI G C GK
Sbjct: 193 APKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ A K + M + I PD +T+N LI+GL K G ++E LL M +G +P+ T+
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGI 434
++ G A E+ +M+ G+
Sbjct: 313 VLYGLLDKKRNLEAKEMMSQMISWGM 338
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G P+ +F +++ D K F G+ D N LI GLC+ G+L+ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+LL+E + +P+ +TF+ L+ G C G E A ++ +RM +E IE D + F +
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 43/328 (13%)
Query: 153 PTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPS 212
PT++ ++ L+ Y G ++ A+ +++ + L++ + K +
Sbjct: 266 PTEK---IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+ FY ++L G P V N LM+ KVG + VF E+ + PTVVS+NT+I
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
Query: 273 YCKS-GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
+S +V E M+++ + P FT+S LI+G CK +R ++A L +EM +G P
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Query: 332 NGVTFTTLID-------------------------------------GQCKDGKVDLALK 354
+ +LI+ G+C GK+ A+
Sbjct: 443 CPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC--GKLSEAVD 500
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
F M +QG PD+ YNAL++G+ K G + EA LL +M G + D + +++G
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFA 560
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAFT 442
+ G A+E+ + + GI+ D V +
Sbjct: 561 RTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P ++ L+ + K+G SA +FDE+ ++PT + TL+ Y K G VE+ L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M+ P V+T++ LI GL K R DEA + +M R GL P+ V L++ K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV-GDLKEARKLLNEMNARGLKPDKI 404
G+V+ F M P +V+YN +I L + + E ++M A + P +
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEG 433
T++ L+DG CK +E AL + + M E+G
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGY---PPKVYLFNVLMHGFCKV 241
+++N Q L+R + + + G + E++ Y P V + L+ +
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAV--LSELVKALGRA 175
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE-RIFPDVFT 300
+ A VF + RK +PT ++N++I + G E+ + M +E FPD T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+SALI+ K R+D A LFDEM + P +TTL+ K GKV+ AL F+ M
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
G P + TY LI GL K G + EA +M GL PD + LM+ K G +E
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 421 SALEIKKRM 429
+ M
Sbjct: 356 ELTNVFSEM 364
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 100/195 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ E G+PP + L++ K +A +F E+ + + + +I + K G
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ E L M+++ PDV+ ++AL++G+ K +EAN L +M G + +
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+++G + G A++ F+ + GI+PD VTYN L+ G +EA +++ EM +
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 398 GLKPDKITFTTLMDG 412
G + D IT+++++D
Sbjct: 614 GFEYDAITYSSILDA 628
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFM 174
W T P ++++ L K H S S + ++ S + +LI Y + +
Sbjct: 367 WRCT-PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 175 DDAVQCIRLVRKKNLQ-IPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNV 233
+ A+ + + +K P C +L+ + K K + E + E+ E ++ V
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYC-SLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
++ F K G + A +F+E+ + P V ++N L+SG K+G + E L ME
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
D+ + + ++NG + A +F+ + G+ P+GVT+ TL+ G + A
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
+ + M D+G D +TY+++++ + V K+
Sbjct: 605 RMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRG-LVPNGVTFTTLIDGQCKDGKVDLALK 354
P T++++I L +E + ++ + ++ EMC G P+ +T++ LI K G+ D A++
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
F M D ++P Y L+ KVG +++A L EM G P T+T L+ G
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 415 KDGDMESALEIKKRMVEEGIELDAV 439
K G ++ A K M+ +G+ D V
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVV 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
S L+ L + +A +F + R P T+ ++I ++G+ + + + M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 361 DQG-IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
++G PD +TY+ALI+ K+G A +L +EM ++P + +TTL+ K G +
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 420 ESALEIKKRMVEEG 433
E AL++ + M G
Sbjct: 285 EKALDLFEEMKRAG 298
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
Query: 170 DSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVY 229
+ G + +A++ + V K ++ + AC L++ + + F++E+ GY P V
Sbjct: 295 NEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVE 354
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+N+L+ G+C VG + SA F+++ +R +FNTLI G G ++G ++ +M
Sbjct: 355 TYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Query: 290 ES-----------------------------------ERIFPDVFTFSALINGLCKESRS 314
+ E++FP S + LC++
Sbjct: 415 QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGM 474
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D+ +D+M G VP+ + LI + GK++ +L+ M+ +G P T+NA+
Sbjct: 475 DDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I G CK + K + +M RG PD ++ L++ C GD++ A + RMVE+ I
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 8/332 (2%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSV----LVFDVLISAYTD 170
W +T P F + S L + L MP + +F +I +
Sbjct: 65 WASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGR 124
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYL 230
+ + + + LV K ++ L+ ++L ++K F +++ G VY
Sbjct: 125 ARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYT 184
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+ +LM G I + + + P V +NTL+ CK+G V R + +M
Sbjct: 185 YGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG---RARSLM- 240
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
SE P+ TF+ LI+ C E + ++ L ++ G VP+ VT T +++ C +G+V
Sbjct: 241 SEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
AL+ + + +G + D+V N L+ G C +G ++ A++ EM +G P+ T+ L+
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G C G ++SAL+ M + I + F
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P ++N L+H CK G + AR + E+ + P V+FN LIS YC + +
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQS 267
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L S PDV T + ++ LC E R EA + + + +G + V TL+ G
Sbjct: 268 MVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C GK+ +A + F M +G P++ TYN LI G C VG L A N+M ++ +
Sbjct: 328 YCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRM 429
TF TL+ G G + L+I + M
Sbjct: 388 FATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P V +M C G + A V + + + + VV+ NTL+ GYC G +
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
R ME + P+V T++ LI G C D A F++M + N TF TLI G
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 343 QCKDGKVDLALKKFQIMLD----QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
G+ D LK ++M D G R D YN +I G K ++A + L +M
Sbjct: 398 LSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK-- 453
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
L P + + + C+ G M+ +M+ EG
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V +++LI+ Y D G +D A+ ++ ++ L+R + G +
Sbjct: 352 NVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL----SIGGRTDDG 407
Query: 217 LEILE------CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
L+ILE + ++ +N +++GF K A + KL P V + +
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL--LKMEKLFPRAVDRSFKL 465
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
C+ G +++ M E P + LI+ + + +E+ L ++M RG +
Sbjct: 466 ISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL 525
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
P TF +I G CK KV +K + M ++G PD +YN L+ LC GD+++A L
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLL 585
Query: 391 LNEMNARGLKPDKITFTTLM 410
+ M + + PD +++LM
Sbjct: 586 FSRMVEKSIVPDPSMWSSLM 605
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 154/323 (47%), Gaps = 3/323 (0%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P FR A C + A F + + + + +V V++ +++ Y SG MD A++
Sbjct: 158 PIFRSAIDAYC---RARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALR 214
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
+ + K+ + + L+ + + + + E+ E G P V FN L+ GF
Sbjct: 215 FYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL 274
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
G I + E+ + R + + L+ G C+ G V++ L + ++R+ P F
Sbjct: 275 SSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
+ +L+ LC E+++ A + +E+ ++G P + TTL++G K G+ + A + M
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
++ GI PD VT+N L+ LC +A +L +++G +PD+ T+ L+ G K+G
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRR 454
Query: 420 ESALEIKKRMVEEGIELDAVAFT 442
+ + M+++ + D +
Sbjct: 455 KEGEVLVNEMLDKDMLPDIFTYN 477
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V ++N +++G+ K GD+ A + + K + +P V +FN LI+GYC+S + L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M+ + P+V +F+ LI G + +E + EM G + T L+DG C+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+G+VD A +L++ + P Y +L+ LC A +++ E+ +G P I
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
TTL++G K G E A ++M+ GI D+V F +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNL 408
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ +V+ F+ LI + SG +++ V+ + + + CE L+ + + +
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
L++L P + + L+ C A + +E+ K+ P ++ TL+ G
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
KSG E+ M + I PD TF+ L+ LC S +AN L +G P+
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDET 439
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL--KEARKL 390
T+ L+ G K+G+ MLD+ + PD+ TYN L++GL G K+ R L
Sbjct: 440 TYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRML 497
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 160/345 (46%), Gaps = 23/345 (6%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMP------TQQSVL----------- 159
A +P FR C+ R+G S + S + + T SVL
Sbjct: 174 ARKPAFR----FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 229
Query: 160 -VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
F + + A+ + AV L++K +I + LL + + K G + +
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFD 288
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
L+ + P + + VL++G+C+V ++ A +++++ + L+P +V+ N ++ G +S
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ +L VM+S+ P+V +++ +I CK+S + A FD+M GL P+ +T
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G K+D + + M ++G PD TYNALI + + A ++ N+M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE 468
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++P TF +M + E + + M+++GI D ++T+
Sbjct: 469 IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTV 513
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 125/272 (45%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ + VL++ + + +A + + + L+ + A +L +++ + + + +
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ G P V + +++ FCK + +A FD++ L+P + LI+G+
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
++ + L M+ + PD T++ALI + + + A ++++M + + P+ TF
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 476
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
++ ++ ++ M+ +GI PD +Y LI GL G +EA + L EM
Sbjct: 477 NMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLD 536
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
+G+K I + + G E E+ +R
Sbjct: 537 KGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 170/388 (43%), Gaps = 67/388 (17%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP +LL + +K +GS SS+ + Q+ T+ + F+ +I+A+++SG M+DAV
Sbjct: 77 RPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFFNAVINAFSESGNMEDAV 135
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG---YPPKVYLFNVLM 235
Q + +++ L L++ P S E +LE G P + FNVL+
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL-------------------------- 269
+CK + A V ++ + +RP V++NT+
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 270 -----------ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
+ GYC+ G V +G R M+ R+ ++ F++LING + D +
Sbjct: 256 AKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 319 HL--------FDE-----------------MCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
+ F+E M + + +T++T+++ G ++ A
Sbjct: 316 EVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 375
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ F+ M+ G++PD Y+ L G + + K+A +LL + +P+ + FTT++ G
Sbjct: 376 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGW 434
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAF 441
C +G M+ A+ + +M + G+ + F
Sbjct: 435 CSNGSMDDAMRVFNKMCKFGVSPNIKTF 462
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 65/310 (20%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
LL M K G E+ + G FN +++ F + G++ A ++ +
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG 145
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE---RIFPDVFTFSALINGLCKESRSD 315
L PT ++NTLI GY +G E L +M E + P++ TF+ L+ CK+ + +
Sbjct: 146 LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 316 EANHLFDEMCRRGLVPNGVTFTTL------------------------------------ 339
EA + +M G+ P+ VT+ T+
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI 265
Query: 340 -IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK------------------ 380
+ G C++G+V L+ + M + + +LV +N+LING +
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMS 325
Query: 381 -------VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
VG+ K ++L M +K D IT++T+M+ G ME A ++ K MV+ G
Sbjct: 326 FNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 385
Query: 434 IELDAVAFTM 443
++ DA A+++
Sbjct: 386 VKPDAHAYSI 395
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
+R+ L+ +++ P + + + E G+ P + + L+ S +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
E+ + + + FN +I+ + +SGN+E+ + M+ + P T++ LI G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 313 RSDEANHLFDEMCRRGLV---PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ + ++ L D M G V PN TF L+ CK KV+ A + + M + G+RPD V
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 370 TYNALINGLCKVGDLKEARKLLNE--MNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
TYN + + G+ A + E + KP+ T ++ G C++G + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 428 RMVEEGIELDAVAF 441
RM E +E + V F
Sbjct: 285 RMKEMRVEANLVVF 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 135 RKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD----DAVQCIRLVRKKNLQ 190
R+G F ++ M + +++VF+ LI+ + + MD D V L+ N +
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE--VMDRDGIDEVTLTLLLMSFNEE 329
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV 250
+ L + MKV + + EC V ++ +M+ + G + A V
Sbjct: 330 VELVGNQK-----MKV-------QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
F E+ K ++P +++ L GY ++ ++ L + E P+V F+ +I+G C
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 436
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
D+A +F++MC+ G+ PN TF TL+ G + + A + Q+M G++P+ T
Sbjct: 437 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 496
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+ L G E+ K +N + + ++ K+
Sbjct: 497 FLLLAEAWRVAGLTDESNKAINALKCKDIEIAKL 530
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 6/230 (2%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRK------LRPTVVSFNTLISGYCKSGNVEE 281
+ +N+ +HGF GD+ +A +F E+ +R P + ++N+LI C G ++
Sbjct: 248 TWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKD 307
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+ ++ PD T+ LI G CK R D+A ++ EM G VP+ + + L+D
Sbjct: 308 ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD 367
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G K KV A + F+ M+ +G+R TYN LI+GL + G + L ++ +G
Sbjct: 368 GTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV 427
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
D ITF+ + C++G +E A+++ + M G +D V + + K+
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQ 477
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P + +N L+H C G + A +V+DE+ P ++ LI G CKS +++
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
R+ G M+ PD ++ L++G K + EA LF++M + G+ + T+ LIDG
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
++G+ + F + +G D +T++ + LC+ G L+ A KL+ EM RG D
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVE 431
+T ++L+ G K G + ++ K + E
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
Y +N +M F K G ++AR V D++ + + ++N +I G K G + +
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
+ + + D+ ++ LIN L K +R DEA LFD M G+ P+ V++ T+I+ K GK
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 349 VDLALKKFQIMLDQGIRPDLVT 370
+ A K + MLD G P+ VT
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVT 772
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRP-TVVSFNTLISGYCKSGNVEEGFRLK 286
V + N + + GD+ A +F+ + T ++N+++S + K G + +
Sbjct: 594 VDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVL 653
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
M D+ T++ +I GL K R+D A+ + D + ++G + V + TLI+ K
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKA 713
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
++D A + F M GI PD+V+YN +I K G LKEA K L M G P+ +T
Sbjct: 714 TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTD 773
Query: 407 TTL 409
T L
Sbjct: 774 TIL 776
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 7/210 (3%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y E+ G+ P ++N L+ G K + A +F+++ + +R + ++N LI G +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+G E GF L ++ + F D TFS + LC+E + + A L +EM RG + VT
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++L+ G K G+ D K + + + + P+++ +NA + K R + +
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK-------RPQSKDKD 519
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ P K +F +M + D SA E+
Sbjct: 520 YTPMFPSKGSFLDIMSMVGSEDDGASAEEV 549
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFP-DVFTFSALINGLCKESRSDEANHLFDEMC 325
NT +S Y G++ +L + + +T++++++ K+ A + D+M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
+ T+ +I G K G+ DLA + QG D+V YN LIN L K L
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
EA +L + M + G+ PD +++ T+++ K G ++ A + K M++ G
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFYLE 218
+ +LI S MDDA++ I + N +P N LL +K + + + + +
Sbjct: 326 TYRILIQGCCKSYRMDDAMR-IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G + +N+L+ G + G + +F ++ K+ ++F+ + C+ G
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+E +L ME+ D+ T S+L+ G K+ R D L + LVPN + +
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Query: 339 LIDGQCK 345
++ K
Sbjct: 505 GVEASLK 511
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 171 SGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVY 229
+G + DA + + ++ + N Q+P +C NL+R + ++ + ++ G P
Sbjct: 117 NGKLTDACKLVEVMARHN-QVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTI 175
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+N+++ CK G IR+A ++ +++ P V+++NT+I GN E+ R
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
P + T++ L+ +C+ S A + ++M G P+ VT+ +L++ C+ G +
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ Q +L G+ + VTYN L++ LC E ++LN M P IT+ L
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
++G CK + A++ +M+E+ D V + AM KE
Sbjct: 356 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKE 397
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 5/239 (2%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
IL G +N L+H C + + + + PTV+++N LI+G CK+
Sbjct: 304 HILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKAR 363
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ M ++ PD+ T++ ++ + KE D+A L + P +T+
Sbjct: 364 LLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++IDG K G + AL+ + MLD GI PD +T +LI G C+ ++EA ++L E + R
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT-----MEEVAMQKE 451
G T+ ++ G CK ++E A+E+ + M+ G + D +T +EE+ M E
Sbjct: 484 GNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSE 542
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + +N L++ C+ G++ V I L V++NTL+ C +E
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+ +M P V T++ LINGLCK A F +M + +P+ VT+ T++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K+G VD A++ ++ + P L+TYN++I+GL K G +K+A +L ++M G+ PD
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
IT +L+ G C+ +E A ++ K G
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 151/300 (50%), Gaps = 14/300 (4%)
Query: 120 PPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQ---SVLVFDVLISAYTDSGFMDD 176
PPF +++L LV R GSA ++ L+ M + ++ ++ L++ G +++
Sbjct: 241 PPFMITYTVLVELVCRYC-GSARAI--EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL----ECGYPPKVYLFN 232
I+ + L++ LL + + W+ EIL + Y P V +N
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHE----YWDEVEEILNIMYQTSYCPTVITYN 353
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
+L++G CK + A F ++ ++K P +V++NT++ K G V++ L G++++
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
P + T++++I+GL K+ +A L+ +M G+ P+ +T +LI G C+ V+ A
Sbjct: 414 CCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEA 473
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ + ++G TY +I GLCK +++ A +++ M G KPD+ +T ++ G
Sbjct: 474 GQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N ++H C G + A + + + + P S + L+ G + +++ + VM
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T++ +I LCK+ A L ++M G P+ +T+ T+I G +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A++ ++ L G P ++TY L+ +C+ A ++L +M G PD +T+ +L++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 412 GCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
C+ G++E + + ++ G+EL+ V +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYN 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D T + +++ LC + +A L + M R VP+ + + L+ G + ++D A+
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
++M+ G PD +TYN +I LCK G ++ A LL +M+ G PD IT+ T++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 417 GDMESALEIKKRMVEEG 433
G+ E A+ K ++ G
Sbjct: 223 GNAEQAIRFWKDQLQNG 239
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 158/345 (45%), Gaps = 23/345 (6%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMP------TQQSVL----------- 159
A +P FR C+ R+G AS + S + + T SVL
Sbjct: 174 ARKPAFR----FFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 229
Query: 160 -VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
F + + A+ + AV L++K +I + LL + + K G + +
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFD 288
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
L+ + P + + VL++G+C+V ++ A +++++ L+P +V+ N ++ G +S
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ +L VM+S+ P+V +++ +I CK+S + A FD+M GL P+ +T
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G K+D + + M ++G PD TYNALI + + ++ N+M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 468
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++P TF +M + E + M+++GI D ++T+
Sbjct: 469 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTV 513
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 4/232 (1%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
E LLR M K + + + + G P V + +++ FCK + +A FD++
Sbjct: 341 EGLLRSMKK----SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
L+P + LI+G+ ++ + L M+ + PD T++ALI + + +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
++++M + + P+ TF ++ ++ + M+ +GI PD +Y LI
Sbjct: 457 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 516
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
GL G +EA + L EM +G+K I + + G E E+ +R
Sbjct: 517 GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 101/225 (44%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ +V++ S DA++ +++ K +R+ ++R K + E++
Sbjct: 333 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ G P ++ L+ GF + + + E+ ++ P ++N LI
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E G R+ M I P + TF+ ++ + ++DEM ++G+ P+ ++T
Sbjct: 453 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 512
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
LI G +GK A + + MLD+G++ L+ YN + G
Sbjct: 513 VLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
S + + ++ + G + +N L + G A+ F+++ + PT ++N ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
G+ S +E R M++ I PD TF+ +ING C+ + DEA LF EM + P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ V++TT+I G +VD L+ F+ M GI P+ TY+ L+ GLC G + EA+ +L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 392 NEMNARGLKP-DKITFTTLMDGCCKDGDMESALEIKKRMV 430
M A+ + P D F L+ K GDM +A E+ K M
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 5/294 (1%)
Query: 142 SSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE-NLL 200
+ L S +P LV++VL A ++ A+Q R + L R ++
Sbjct: 102 TRLQNSIRDLVPEWDHSLVYNVLHGAKK----LEHALQFFRWTERSGLIRHDRDTHMKMI 157
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ + +V + L++ E G P +F VL+ + K G ++ + +F ++ +
Sbjct: 158 KMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVE 217
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
T+ S+N+L + G R M SE + P T++ ++ G R + A
Sbjct: 218 RTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF 277
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F++M RG+ P+ TF T+I+G C+ K+D A K F M I P +V+Y +I G
Sbjct: 278 FEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
V + + ++ EM + G++P+ T++TL+ G C G M A I K M+ + I
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%)
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
+V + AR + ++P++ + F LI Y K+G V+E ++ M+ + +
Sbjct: 162 EVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIK 221
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
++++L + + R A F++M G+ P T+ ++ G +++ AL+ F+ M
Sbjct: 222 SYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
+GI PD T+N +ING C+ + EA KL EM + P +++TT++ G +
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 420 ESALEIKKRMVEEGIELDAVAFT 442
+ L I + M GIE +A ++
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYS 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N ++ C G A ++F ++ KR ++ + N LI G+ K GN + + + +M
Sbjct: 477 YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ + + LI + +A D M G VP+ F ++I+ +DG+V
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 351 LALKKFQIMLDQ--GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
A + IM+D+ GI ++ ++ L G ++EA ++ +N G D +
Sbjct: 596 TASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD---LDS 652
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELD 437
L+ + G +AL ++++ G+E D
Sbjct: 653 LLSVLSEKGKTIAAL----KLLDFGLERD 677
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 118/291 (40%), Gaps = 10/291 (3%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
F+ +I+ + MD+A + ++ + + + +++ + V + E+
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS-FNTLISGYCKSGN 278
G P ++ L+ G C G + A+ + + + + P S F L+ K+G+
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD 411
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG----- 333
+ + M + + + + LI CK S + A L D + + ++
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 334 ---VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
+ +I+ C +G+ A F+ ++ +G++ D N LI G K G+ + ++
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
L M+ RG+ + + L+ G+ A MVE+G D+ F
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLF 581
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I D T +I L + S+ + A + +M +G+ + F LI+ K G V ++
Sbjct: 146 IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESV 205
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
K FQ M D G+ + +YN+L + + G A++ N+M + G++P + T+ ++ G
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFT 442
+E+AL + M GI D F
Sbjct: 266 FLSLRLETALRFFEDMKTRGISPDDATFN 294
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 150/288 (52%), Gaps = 3/288 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ ++ LI YT +D+A R +R+ ++ + +L+ K + +
Sbjct: 48 VITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFD 107
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSA-RLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+L G P ++ +N LM + K+G A +++ ++I L P + ++N L+ CKS
Sbjct: 108 EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKS 167
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G+ + L ++S R+ P++ T++ LINGLCK R + + E+ + G PN VT+
Sbjct: 168 GHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TT++ K +++ L+ F M +G D A+++ L K G +EA + ++E+
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 397 RGLKP-DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
G + D +++ TL++ KDG++++ ++ + + +G++ D T+
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTI 334
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
L N+ ++ CK ++ A + + + + P V+++NTLI GY + ++E + + M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN----------------- 332
I PDV T+++LI+G K + LFDEM GL P+
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 333 ------------------GV-TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
G+ T+ L+D CK G D A++ F+ L ++P+L+TYN
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNI 193
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LINGLCK + ++ E+ G P+ +T+TT++ K +E L++ +M +EG
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 434 IELDAVA 440
D A
Sbjct: 254 YTFDGFA 260
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 6/304 (1%)
Query: 138 HGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
HG A + + + +++L+ A SG D+A++ + ++ + ++ L
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
L+ + K + G E+ + GY P + ++ + K I +F ++ K
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFR-LKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+ ++S K+G EE + + ++ S D+ +++ L+N K+ D
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
+ L +E+ +GL P+ T T +++G G A K + + G++P +VT N LI+
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
GLCK G + A +L M R D+ T+T+++ CKDG + A ++ +G+++
Sbjct: 373 GLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
Query: 437 DAVA 440
+ A
Sbjct: 429 PSSA 432
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 285 LKGVMESERIFPDVFT--FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
++G+M+ FP + T + +N LCK + A L + R G++P+ +T+ TLI G
Sbjct: 2 VRGLMK----FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ +D A + M + GI PD+ TYN+LI+G K L +L +EM GL PD
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPD 117
Query: 403 KITFTTLMDGCCKDGDMESALEI 425
++ TLM K G A +I
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKI 140
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 120/272 (44%), Gaps = 6/272 (2%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
+P + L+ L + GS + ++ T +V + ++ Y + ++ +
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV-TYTTMLKMYFKTKRIEKGL 243
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPK-VYLFNVLMHG 237
Q ++K+ A ++ ++K ++E E++ G + + +N L++
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
+ K G++ + + +EI + L+P + +++G GN + + + P
Sbjct: 304 YFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPS 363
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
V T + LI+GLCK D A LF M V + T+T+++ CKDG++ A K
Sbjct: 364 VVTCNCLIDGLCKAGHVDRAMRLFASM----EVRDEFTYTSVVHNLCKDGRLVCASKLLL 419
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
++G++ A+++G+ + + ARK
Sbjct: 420 SCYNKGMKIPSSARRAVLSGIRETVSYQAARK 451
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 131/270 (48%), Gaps = 1/270 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
F ++ Y +G D AV+ + + L + +L + K K ++E +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RA 186
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L + +NV+++G+C + A V E+ +R + P + ++NT++ G+ ++G +
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+ M+ DV T++ +++G A ++FDEM R G++P+ T+ +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I CK V+ A+ F+ M+ +G P++ TYN LI GL G+ +L+ M G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+P+ T+ ++ + ++E AL + ++M
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
Q + F+ ++ S ++ A + R +R + + +L +K + E
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
E++E G P + +N ++ GF + G IR A F E+ KR VV++ T++ G+
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+G ++ + M E + P V T++A+I LCK+ + A +F+EM RRG PN T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ LI G G+ + Q M ++G P+ TYN +I + ++++A L +M
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 396 ARGLKPDKITFTTLMDG 412
+ P+ T+ L+ G
Sbjct: 398 SGDCLPNLDTYNILISG 414
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L G PK F ++ + G A +F + + + SFNT++ CKS V
Sbjct: 120 LRIGPSPKT--FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E+ + L + R D T++ ++NG C R+ +A + EM RG+ PN T+ T+
Sbjct: 178 EKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ G + G++ A + F M + D+VTY +++G G++K AR + +EM G+
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
P T+ ++ CK ++E+A+ + + MV G E + + +
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
P + + +L + E G + FN ++ CK + A +F + R V++N
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNV 200
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+++G+C + + M I P++ T++ ++ G + + A F EM +R
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ VT+TT++ G G++ A F M+ +G+ P + TYNA+I LCK +++ A
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ EM RG +P+ T+ L+ G G+ E+ +RM EG E + + M
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++V+++ + A++ ++ + ++ + L +L+ + +WEF+L
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + V + ++HGF G+I+ AR VFDE+ + + P+V ++N +I CK
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
NVE + M P+V T++ LI GL L M G PN T+
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYN 374
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+I + +V+ AL F+ M P+L TYN LI+G+
Sbjct: 375 MMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 225 PPKVYLFNVL-MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P + F+ L H V D S L D + L PTV S
Sbjct: 71 PKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWS------------------ 112
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L M S RI P TF+ + + D+A LF M G + +F T++D
Sbjct: 113 -LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
CK +V+ A + F+ + + D VTYN ++NG C + +A ++L EM RG+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
T+ T++ G + G + A E M + E+D V +T
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ E++ GY P V +NVL+ G G+ + + P ++N +I Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
VE+ L M S P++ T++ LI+G+ RS++
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 4/306 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTM---PTQQSVLVFDVLISAYTDS 171
WL +P F+ +V G L M Q + + ++ LI +Y +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
++++A+ +++ + L+ K + + Y + G P + +
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+V+++ K G + +A +F E+ + P +V++N ++ + K+ N + +L M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T+S ++ L +EA +F EM ++ +P+ + L+D K G V+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + +Q ML G+RP++ T N+L++ +V + EA +LL M A GL+P T+T L+
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Query: 412 GCCKDG 417
CC DG
Sbjct: 653 -CCTDG 657
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P +N L+H + + + A VF+++ + +P V++ TLI + K+G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + M++ + PD FT+S +IN L K A+ LF EM +G PN VT+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++D K ALK ++ M + G PD VTY+ ++ L G L+EA + EM +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
PD+ + L+D K G++E A + + M+ G+
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 85/148 (57%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P+ T++ LI+ + + +EA ++F++M G P+ VT+ TLID K G +D+A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+Q M G+ PD TY+ +IN L K G L A KL EM +G P+ +T+ +MD K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
+ ++AL++ + M G E D V +++
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + G+ + + ++ + + + DE+ + +P V++N LI Y
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++ + E + M+ PD T+ LI+ K D A ++ M GL P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T++ +I+ K G + A K F M+DQG P+LVTYN +++ K + + A KL +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
G +PDK+T++ +M+ G +E A + M ++
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D T++ ++ L + + N L DEM R G PN VT+ LI + ++ A+ F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
M + G +PD VTY LI+ K G L A + M A GL PD T++ +++ K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
G + +A ++ MV++G + V + +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G +G T+TT++ + + K M+ G +P+ VTYN LI+ + L EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ N+M G KPD++T+ TL+D K G ++ A+++ +RM G+ D +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 4/306 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTM---PTQQSVLVFDVLISAYTDS 171
WL +P F+ +V G L M Q + + ++ LI +Y +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
++++A+ +++ + L+ K + + Y + G P + +
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+V+++ K G + +A +F E+ + P +V++N ++ + K+ N + +L M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T+S ++ L +EA +F EM ++ +P+ + L+D K G V+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + +Q ML G+RP++ T N+L++ +V + EA +LL M A GL+P T+T L+
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Query: 412 GCCKDG 417
CC DG
Sbjct: 653 -CCTDG 657
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P +N L+H + + + A VF+++ + +P V++ TLI + K+G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + M++ + PD FT+S +IN L K A+ LF EM +G PN VT+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++D K ALK ++ M + G PD VTY+ ++ L G L+EA + EM +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
PD+ + L+D K G++E A + + M+ G+
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 85/148 (57%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P+ T++ LI+ + + +EA ++F++M G P+ VT+ TLID K G +D+A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+Q M G+ PD TY+ +IN L K G L A KL EM +G P+ +T+ +MD K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
+ ++AL++ + M G E D V +++
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + G+ + + ++ + + + DE+ + +P V++N LI Y
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++ + E + M+ PD T+ LI+ K D A ++ M GL P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T++ +I+ K G + A K F M+DQG P+LVTYN +++ K + + A KL +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
G +PDK+T++ +M+ G +E A + M ++
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D T++ ++ L + + N L DEM R G PN VT+ LI + ++ A+ F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
M + G +PD VTY LI+ K G L A + M A GL PD T++ +++ K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
G + +A ++ MV++G + V + +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G +G T+TT++ + + K M+ G +P+ VTYN LI+ + L EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ N+M G KPD++T+ TL+D K G ++ A+++ +RM G+ D +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 4/306 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTM---PTQQSVLVFDVLISAYTDS 171
WL +P F+ +V G L M Q + + ++ LI +Y +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
++++A+ +++ + L+ K + + Y + G P + +
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+V+++ K G + +A +F E+ + P +V++N ++ + K+ N + +L M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T+S ++ L +EA +F EM ++ +P+ + L+D K G V+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + +Q ML G+RP++ T N+L++ +V + EA +LL M A GL+P T+T L+
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Query: 412 GCCKDG 417
CC DG
Sbjct: 653 -CCTDG 657
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++ G P +N L+H + + + A VF+++ + +P V++ TLI + K+G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
++ + M++ + PD FT+S +IN L K A+ LF EM +G PN VT+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++D K ALK ++ M + G PD VTY+ ++ L G L+EA + EM +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
PD+ + L+D K G++E A + + M+ G+
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 85/148 (57%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P+ T++ LI+ + + +EA ++F++M G P+ VT+ TLID K G +D+A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
+Q M G+ PD TY+ +IN L K G L A KL EM +G P+ +T+ +MD K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTM 443
+ ++AL++ + M G E D V +++
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + G+ + + ++ + + + DE+ + +P V++N LI Y
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++ + E + M+ PD T+ LI+ K D A ++ M GL P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T++ +I+ K G + A K F M+DQG P+LVTYN +++ K + + A KL +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
G +PDK+T++ +M+ G +E A + M ++
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
D T++ ++ L + + N L DEM R G PN VT+ LI + ++ A+ F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
M + G +PD VTY LI+ K G L A + M A GL PD T++ +++ K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
G + +A ++ MV++G + V + +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G +G T+TT++ + + K M+ G +P+ VTYN LI+ + L EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ N+M G KPD++T+ TL+D K G ++ A+++ +RM G+ D +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN---VEEGF-RLKGVMESER 293
+ K G +A+ VF+E+P R + +V+SFN L+S Y S VEE F L G +
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS--- 175
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
I PD+ +++ LI LC++ EA L DE+ +GL P+ VTF TL+ G+ +L
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ + M+++ + D+ TYNA + GL KE L E+ A GLKPD +F ++ G
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGS 295
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+G M+ A K +V+ G D F +
Sbjct: 296 INEGKMDEAEAWYKEIVKHGYRPDKATFAL 325
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT-LISGYCKSGNVEEGFR 284
P + +N L+ C+ + A + DEI + L+P +V+FNT L+S Y K G E G
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEE 236
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
+ M + + D+ T++A + GL E++S E +LF E+ GL P+ +F +I G
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSI 296
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+GK+D A ++ ++ G RPD T+ L+ +CK GD + A +L E ++ +
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 356
Query: 405 TFTTLMDGCCKDGDMESALEIKK 427
T L+D K E A EI K
Sbjct: 357 TLQQLVDELVKGSKREEAEEIVK 379
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 288 VMESERIFPDVFT--FSALINGL-CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
++E ++ + D+ F+A I L K + A +F+EM R + ++F L+
Sbjct: 96 ILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYR 155
Query: 345 KDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
K D+ + F + + I+PD+V+YN LI LC+ L EA LL+E+ +GLKPD
Sbjct: 156 LSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDI 215
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
+TF TL+ G E EI +MVE+ + +D + + + E
Sbjct: 216 VTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIP-KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
FN L+ G CKVG ++ A + + + + P V++N LI GYC++G +E + M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ + I P+V T + ++ G+C+ + A F +M + G+ N VT+ TLI C V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ A+ ++ ML+ G PD Y ALI+GLC+V +A +++ ++ G D + + L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ C + E E+ M +EG + D++ +
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 26/306 (8%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPP--GPSW-------- 213
LIS ++ G ++V R + A ++L +MK K P P +
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 214 ---------EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK------ 258
+ L++ E P V +L++ CK + A VF+++ ++
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVME-SERIFPDVFTFSALINGLCKESRSDEA 317
++ + FNTLI G CK G ++E L M+ ER P+ T++ LI+G C+ + + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
+ M + PN VT T++ G C+ +++A+ F M +G++ ++VTY LI+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
C V ++++A +M G PD + L+ G C+ A+ + +++ E G LD
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 438 AVAFTM 443
+A+ M
Sbjct: 546 LLAYNM 551
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 3/231 (1%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+Y ++LE G P ++ L+ G C+V A V +++ + ++++N LI +C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
N E+ + + ME E PD T++ LI+ K + + ++M GL P
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ +ID C G++D ALK F+ M L + P+ V YN LIN K+G+ +A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTME 444
M + ++P+ T+ L + E+ L++ MVE+ E + + TME
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI--TME 726
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G+ + +N+L+ FC + + ++ K +P +++NTLIS + K + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV-PNGVTFTTL 339
R+ M + + P V T+ A+I+ C DEA LF +M V PN V + L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ K G AL + M + +RP++ TYNAL L + + KL++EM +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 400 KPDKITFTTLMD 411
+P++IT LM+
Sbjct: 719 EPNQITMEILME 730
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++ LIS DA++ + +++ + L A L+ +E ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P +N L+ F K D S + +++ + L PTV ++ +I YC G +
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 280 EEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+E +L K + ++ P+ ++ LIN K +A L +EM + + PN T+
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
L + + + LK M++Q P+ +T L+ L +L + RK +
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+L +++LI + D + + + + K+ + L+ + K K
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP-KRKLRPTVVSFNTLISGYCKS 276
++ E G P V + ++ +C VG++ A +F ++ K+ P V +N LI+ + K
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GN + LK M+ + + P+V T++AL L ++++ + L DEM + PN +T
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 337 TTLID 341
L++
Sbjct: 726 EILME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 231 FNVLMHGFCKVGDIRSAR--LVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
FN L+ G CKVG ++ A LV ++ +R + P V++N LI GYC++G +E +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M+ + I P+V T + ++ G+C+ + A F +M + G+ N VT+ TLI C
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
V+ A+ ++ ML+ G PD Y ALI+GLC+V +A +++ ++ G D + +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
L+ C + E E+ M +EG + D++ +
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK------LRPTVVSFN 267
+ L++ E P V +L++ CK + A VF+++ ++ ++ + FN
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 268 TLISGYCKSGNVEEGFRLKGVME-SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
TLI G CK G ++E L M+ ER P+ T++ LI+G C+ + + A + M
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
+ PN VT T++ G C+ +++A+ F M +G++ ++VTY LI+ C V ++++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
A +M G PD + L+ G C+ A+ + +++ E G LD +A+ M
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+Y ++LE G P ++ L+ G C+V A V +++ + ++++N LI +C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
N E+ + + ME E PD T++ LI+ K + + ++M GL P
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ +ID C G++D ALK F+ M L + P+ V YN LIN K+G+ +A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
M + ++P+ T+ L + E+ L++ MVE
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 35/239 (14%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P +N L+ G+C+ G + +A+ V + + +++P VV+ NT++ G C+ +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC- 344
ME E + +V T+ LI+ C S ++A + +++M G P+ + LI G C
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 345 --------------KDGKVDLAL-----------------KKFQIMLD---QGIRPDLVT 370
K+G L L K ++++ D +G +PD +T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
YN LI+ K D + +++ +M GL P T+ ++D C G+++ AL++ K M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ + ++ LI Y +G ++ A + + +++ ++ + ++ M + + F+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++ + G V + L+H C V ++ A ++++ + P + LISG C+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ R+ ++ D+ ++ LI C ++ +++ + +M + G P+ +T+
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI K + + + M + G+ P + TY A+I+ C VG+L EA KL +M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 397 RG-LKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ P+ + + L++ K G+ AL +K+ M
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+L +++LI + D + + + + K+ + L+ + K K
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP-KRKLRPTVVSFNTLISGYCKS 276
++ E G P V + ++ +C VG++ A +F ++ K+ P V +N LI+ + K
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
GN + LK M+ + + P+V T++AL L ++++ + L DEM
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 231 FNVLMHGFCKVGDIRSAR--LVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
FN L+ G CKVG ++ A LV ++ +R + P V++N LI GYC++G +E +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M+ + I P+V T + ++ G+C+ + A F +M + G+ N VT+ TLI C
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
V+ A+ ++ ML+ G PD Y ALI+GLC+V +A +++ ++ G D + +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
L+ C + E E+ M +EG + D++ +
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK------LRPTVVSFN 267
+ L++ E P V +L++ CK + A VF+++ ++ ++ + FN
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 268 TLISGYCKSGNVEEGFRLKGVME-SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
TLI G CK G ++E L M+ ER P+ T++ LI+G C+ + + A + M
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
+ PN VT T++ G C+ +++A+ F M +G++ ++VTY LI+ C V ++++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
A +M G PD + L+ G C+ A+ + +++ E G LD +A+ M
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 3/231 (1%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+Y ++LE G P ++ L+ G C+V A V +++ + ++++N LI +C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
N E+ + + ME E PD T++ LI+ K + + ++M GL P
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ +ID C G++D ALK F+ M L + P+ V YN LIN K+G+ +A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTME 444
M + ++P+ T+ L + E+ L++ MVE+ E + + TME
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI--TME 726
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 35/239 (14%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P +N L+ G+C+ G + +A+ V + + +++P VV+ NT++ G C+ +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC- 344
ME E + +V T+ LI+ C S ++A + +++M G P+ + LI G C
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 345 --------------KDGKVDLAL-----------------KKFQIMLD---QGIRPDLVT 370
K+G L L K ++++ D +G +PD +T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
YN LI+ K D + +++ +M GL P T+ ++D C G+++ AL++ K M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ + ++ LI Y +G ++ A + + +++ ++ + ++ M + + F+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+++ + G V + L+H C V ++ A ++++ + P + LISG C+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ R+ ++ D+ ++ LI C ++ +++ + +M + G P+ +T+
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI K + + + M + G+ P + TY A+I+ C VG+L EA KL +M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 397 RG-LKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ P+ + + L++ K G+ AL +K+ M
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G+ + +N+L+ FC + + ++ K +P +++NTLIS + K + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV-PNGVTFTTL 339
R+ M + + P V T+ A+I+ C DEA LF +M V PN V + L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ K G AL + M + +RP++ TYNAL L + + KL++EM +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 400 KPDKITFTTLMD 411
+P++IT LM+
Sbjct: 719 EPNQITMEILME 730
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++ LIS DA++ + +++ + L A L+ +E ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ G P +N L+ F K D S + +++ + L PTV ++ +I YC G +
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 280 EEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+E +L K + ++ P+ ++ LIN K +A L +EM + + PN T+
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
L + + + LK M++Q P+ +T L+ L +L + RK +
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+L +++LI + D + + + + K+ + L+ + K K
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP-KRKLRPTVVSFNTLISGYCKS 276
++ E G P V + ++ +C VG++ A +F ++ K+ P V +N LI+ + K
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
GN + LK M+ + + P+V T++AL L ++++ + L DEM + PN +T
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 337 TTLID 341
L++
Sbjct: 726 EILME 730
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 110/211 (52%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++ G P + L++ CK G++ A + +++ V++N L+ G C G+
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ + + + + + P+ FT+S L+ KE +DEA L DE+ +G PN V++
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+ G CK+G+ D A+ F+ + +G + ++V+YN L+ LC G +EA LL EM+
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
P +T+ L++ G E AL++ K M
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P V L++ CK ++ A V + + + P ++ L++ CK GNV
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L ME + T++AL+ GLC +++ + + ++GL PN T++ L++
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K+ D A+K ++ +G P+LV+YN L+ G CK G +A L E+ A+G K +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 403 KITFTTLMDGCCKDGDMESA 422
+++ L+ C DG E A
Sbjct: 281 VVSYNILLRCLCCDGRWEEA 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 98/184 (53%)
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
+P V L+ CK+ +++ R+ +M S I PD ++ L+N LCK A
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
L ++M G N VT+ L+ G C G ++ +L+ + ++ +G+ P+ TY+ L+
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
K EA KLL+E+ +G +P+ +++ L+ G CK+G + A+ + + + +G + + V
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 440 AFTM 443
++ +
Sbjct: 283 SYNI 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 6/261 (2%)
Query: 174 MDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNV 233
+ A++ I L+ + A L+ + K G + + ++ + GYP +N
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
L+ G C +G + + + + ++ L P +++ L+ K +E +L + +
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
P++ +++ L+ G CKE R+D+A LF E+ +G N V++ L+ C DG+ + A
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA- 300
Query: 354 KKFQIMLDQGIR-PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT---L 409
+D G R P +VTYN LIN L G ++A ++L EM ++G ++T T+ +
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPV 359
Query: 410 MDGCCKDGDMESALEIKKRMV 430
+ CK+G ++ ++ M+
Sbjct: 360 IARLCKEGKVDLVVKCLDEMI 380
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+R + + S +F +++ G P + ++ L+ K A + DEI +
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
P +VS+N L++G+CK G ++ L + ++ +V +++ L+ LC + R +EAN
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML--DQGIRPDLVTYNALIN 376
L EM P+ VT+ LI+ G+ + AL+ + M + R +YN +I
Sbjct: 302 SLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
LCK G + K L+EM R KP++ T+ + C + ++ A I
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI 410
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 146/385 (37%), Gaps = 73/385 (18%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P A++ L + ++G+ + ++ + + ++ L+ G ++ ++Q
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 181 IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+ + +K L LL K + + + EI+ G P + +NVL+ GFCK
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFT 300
G A +F E+P + + VVS+N L+ C G EE L M+ P V T
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 318
Query: 301 FSALINGLCKESRSDEA----------NHLF---------------------------DE 323
++ LIN L R+++A NH F DE
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 324 MCRRGLVPNGVTFT-----------------------------------TLIDGQCKDGK 348
M R PN T+ ++I C+ G
Sbjct: 379 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFT 407
A + M G PD TY+ALI GLC G A ++L+ M + KP F
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 498
Query: 408 TLMDGCCKDGDMESALEIKKRMVEE 432
++ G CK + A+E+ + MVE+
Sbjct: 499 AMILGLCKIRRTDLAMEVFEMMVEK 523
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 38/307 (12%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++VL++ + G DDA+ R + K + + + LLR + +
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK--RKLRPTVVSFNTLISGYC 274
E+ P V +N+L++ G A V E+ K + R T S+N +I+ C
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSAL------------------------------ 304
K G V+ + M R P+ T++A+
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD 424
Query: 305 -----INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
I LC++ + A L EM R G P+ T++ LI G C +G A++ IM
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 360 LD-QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ + +P + +NA+I GLCK+ A ++ M + P++ T+ L++G + +
Sbjct: 485 EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Query: 419 MESALEI 425
+E A E+
Sbjct: 545 LELAKEV 551
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 313 RSDEAN------HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
RSDE N HL + + G PN T L+ CK ++ A++ ++M+ GI P
Sbjct: 81 RSDEPNLSDSFSHL-ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIP 139
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
D Y L+N LCK G++ A +L+ +M G + +T+ L+ G C G + +L+
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 199
Query: 427 KRMVEEGIELDAVAFTMEEVAMQKE 451
+R++++G+ +A ++ A KE
Sbjct: 200 ERLMQKGLAPNAFTYSFLLEAAYKE 224
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN--LLRYMMKVKPPGPSWE 214
SV+ +++LI++ G + A+Q ++ + K N Q + A ++ + K +
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
E++ P +N + ++ A + + ++ T + ++I+ C
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 434
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD-----EMCRRGL 329
+ GN F+L M PD T+SALI GLC E A + E C+
Sbjct: 435 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK--- 491
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
P F +I G CK + DLA++ F++M+++ P+ TY L+ G+ +L+ A++
Sbjct: 492 -PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKE 550
Query: 390 LLNEMNAR 397
+L+E+ R
Sbjct: 551 VLDELRLR 558
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK-LRPTVVSFNTLI 270
+++ E+ CG+ P + ++ L+ G C G A V + + + +PTV +FN +I
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
G CK + + +M ++ P+ T++ L+ G+ E + A + DE+ R ++
Sbjct: 502 LGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 109/196 (55%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E +I E G ++N + K+ I +F+++ K P + ++N LI+ +
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
+ G V+E + +E PD+ ++++LIN L K DEA+ F EM +GL P+
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT++TL++ K +V++A F+ ML +G +P++VTYN L++ L K G EA L ++
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 394 MNARGLKPDKITFTTL 409
M +GL PD IT+T L
Sbjct: 608 MKQQGLTPDSITYTVL 623
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 127/249 (51%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
+S L +S+ GH S + + + P + + ++ + +G +A++ + +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
+K + + + K+K + + ++ + G P ++ +N+L+ F +VG++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
A +F+E+ + +P ++S+N+LI+ K+G+V+E M+ + + PDV T+S L+
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
K R + A LF+EM +G PN VT+ L+D K+G+ A+ + M QG+
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Query: 366 PDLVTYNAL 374
PD +TY L
Sbjct: 615 PDSITYTVL 623
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
++ C G A + +I ++ + + +NT+ S K + L M+ +
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
PD+FT++ LI + DEA ++F+E+ R P+ +++ +LI+ K+G VD A
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+F+ M ++G+ PD+VTY+ L+ K ++ A L EM +G +P+ +T+ L+D
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 414 CKDGDMESALEIKKRMVEEGIELDAVAFTMEE 445
K+G A+++ +M ++G+ D++ +T+ E
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 110/214 (51%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+++ L+ K+G + A +F ++ ++ S+ +++ C +G E + +
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ + D ++ + + L K + + LF++M + G P+ T+ LI + G+V
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
D A+ F+ + +PD+++YN+LIN L K GD+ EA EM +GL PD +T++TL
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
M+ K +E A + + M+ +G + + V + +
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 122 FREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCI 181
F S+L +V HG+ S++ ++LI + G +D C+
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTV-----------------NILIGFF---GNTEDLQMCL 191
Query: 182 RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
RLV+K +L++ + LL+ ++ + +++ Y EI G+ ++ +N+L+ K
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK- 250
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
D ++ + VF+++ KR R ++ +I + G +E L M +E + +V +
Sbjct: 251 -DEKACQ-VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG---KVDLALKKFQI 358
+ L+ L K D+A +F M G PN T++ L++ +G ++D ++ +
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ QGI Y+ L+ L K+G + EA +L +M + +K ++ ++ ++++ C G
Sbjct: 369 YMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 419 MESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
A+E+ ++ E+G+ D + + A+ K
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 157/345 (45%), Gaps = 23/345 (6%)
Query: 117 ATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMP------TQQSVL----------- 159
A +P FR C+ R+G S + S + + T SVL
Sbjct: 173 ARKPAFR----FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 228
Query: 160 -VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
F + + A+ + AV L++K +I + LL + + K G + +
Sbjct: 229 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFD 287
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
L+ + P + + VL++G+C+V ++ A +++++ L+P +V+ N ++ G +S
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ +L VM+S+ P+V +++ +I CK+S + A FD+M GL P+ +T
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G K+D + + M ++G PD TYNALI + + ++ N+M
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 467
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
++P TF +M + E + M+++GI D ++T+
Sbjct: 468 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTV 512
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 4/232 (1%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
E LLR M K + + + + G P V + +++ FCK + +A FD++
Sbjct: 340 EGLLRSMKK----SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
L+P + LI+G+ ++ + L M+ + PD T++ALI + + +
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 455
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
++++M + + P+ TF ++ ++ + M+ +GI PD +Y LI
Sbjct: 456 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 515
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
GL G +EA + L EM +G+K I + + G E E+ +R
Sbjct: 516 GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 101/225 (44%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
++ +V++ S DA++ +++ K +R+ ++R K + E++
Sbjct: 332 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 391
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++++ G P ++ L+ GF + + + E+ ++ P ++N LI
Sbjct: 392 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 451
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E G R+ M I P + TF+ ++ + ++DEM ++G+ P+ ++T
Sbjct: 452 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 511
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
LI G +GK A + + MLD+G++ L+ YN + G
Sbjct: 512 VLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 10/324 (3%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVL---VFDVLISAYTDSGFMDDAVQCIR 182
H ++ V G S S+ A L +P Q+ +L + ++ AY+ +G + A+
Sbjct: 175 HQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFE 234
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE----CGYPPKVYLFNVLMHGF 238
+++ L +L K+ G SW L +L+ G + + ++
Sbjct: 235 RMKEMGPSPTLVTYNVILDVFGKM---GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ G +R A+ F E+ P V++N L+ + K+G E + ME D
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T++ L+ + S EA + + M ++G++PN +T+TT+ID K GK D ALK F
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M + G P+ TYNA+++ L K E K+L +M + G P++ T+ T++ C G
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+ + + M G E D F
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFN 495
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 35/234 (14%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ Y E+ G+ V +N L++ + GD RS V ++ + +PT S++ ++ Y
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY 571
Query: 274 CKSGN----------VEEG----------------FRLKGVMESERIF---------PDV 298
K GN ++EG F+ + + SER F PD+
Sbjct: 572 AKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
F+++++ + + D+A + + + GL P+ VT+ +L+D + G+ A + +
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ ++PDLV+YN +I G C+ G ++EA ++L+EM RG++P T+ T + G
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 3/312 (0%)
Query: 125 AHSLLCFLVSRKG-HGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSG-FMDDAVQCIR 182
A++ + SR G + A LF + P+ +++ ++V++ + G + +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSP-TLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
+R K L+ C +L + + EF+ E+ CGY P +N L+ F K G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
A V E+ + V++N L++ Y ++G +E + +M + + P+ T++
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ 362
+I+ K + DEA LF M G VPN T+ ++ K + + +K M
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
G P+ T+N ++ G K ++ EM + G +PD+ TF TL+ + G A
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 423 LEIKKRMVEEGI 434
++ M G
Sbjct: 511 SKMYGEMTRAGF 522
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
GY P + +FN ++ F + A + + I + L P +V++N+L+ Y + G +
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+ +E ++ PD+ +++ +I G C+ EA + EM RG+ P T+ T + G
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
G + M RP+ +T+ +++G C+ G EA ++++
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I E G P + +N LM + + G+ A + + K +L+P +VS+NT+I G+C+ G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++E R+ M I P +FT++ ++G E + + M + PN +TF
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 339 LIDGQCKDGKVDLAL 353
++DG C+ GK A+
Sbjct: 777 VVDGYCRAGKYSEAM 791
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 2/246 (0%)
Query: 200 LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL 259
LR + + P + +L+ P Y N +++G CK+G + A V D++ K
Sbjct: 419 LRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 260 -RPTVVSFNTLISGYCKSGNVEEGFR-LKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
P V+ NT++ G G EE L VM +I P V ++A+I GL K + DEA
Sbjct: 479 CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
+F ++ + + + T+ +IDG C KVD+A K + ++ R D Y A + G
Sbjct: 539 MSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKG 598
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
LC+ G L +A L ++ G P+ + + T++ C + G A +I + M + G D
Sbjct: 599 LCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
Query: 438 AVAFTM 443
AV + +
Sbjct: 659 AVTWRI 664
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P V F L+ G+C++ ++ A VFDE+ +RP ++ + LI G+ K +VE G
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 283 FRL-KGVMESERIFPD----VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+L K + E + D F+ L++ +C+E ++ + + M V +
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ID C+ + A + IM +G++P +YNA+I+GLCK G A +LL E +
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMV-EEGIE 435
P + T+ LM+ CK+ D A + + M+ +EG +
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD 410
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 246 SARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
+AR+V+ + + L+P S+N +I G CK G ++L FP +T+ L+
Sbjct: 326 AARIVY-IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
LCKE + +A ++ + M R+ + + G C L ML R
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNE-MNARGLKPDKITFTTLMDGCCKDGDMESALE 424
PD T N +INGLCK+G + +A K+L++ M + PD +T T+M G G E AL+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 425 IKKR-MVEEGIELDAVAFT 442
+ R M E I+ VA+
Sbjct: 505 VLNRVMPENKIKPGVVAYN 523
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 4/241 (1%)
Query: 177 AVQCIRLVRKKNLQIPLRACEN-LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + + +++ K L+ P R N ++ + K +++ E E + P Y + +LM
Sbjct: 326 AARIVYIMKSKGLK-PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
CK D AR V + + +++ +N + G C N E + M
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCR-RGLVPNGVTFTTLIDGQCKDGKVDLALK 354
PD +T + +INGLCK R D+A + D+M + P+ VT T++ G G+ + AL
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 355 KF-QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
++M + I+P +V YNA+I GL K+ EA + ++ + D T+ ++DG
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 414 C 414
C
Sbjct: 565 C 565
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEI-PKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P N +M G G A V + + P+ K++P VV++N +I G K +E
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
+ G +E + D T++ +I+GLC ++ D A +D++ + + + G
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
C+ G + A + D G P++V YN +I + G +EA ++L EM G PD
Sbjct: 600 CQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDA 659
Query: 404 ITFTTL 409
+T+ L
Sbjct: 660 VTWRIL 665
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG--YCKSGNVE 280
GY P + ++H C G A F P + N +I+ Y +S
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
G + + + P + ++ L+N LC R +A+ L +M RG +P+ VTFTTLI
Sbjct: 145 LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-----N 395
G C+ ++++A K F M GIRP+ +T + LI G K+ D++ RKL+ E+ N
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN 264
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
F L+D C++G EI + M
Sbjct: 265 ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 48/257 (18%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT-----VVSFNTLISG 272
E+ CG P +VL+ GF K+ D+ + R + E+ + T +F L+
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
C+ G + F + M F + +I+ LC+ R+ A + M +GL P
Sbjct: 282 MCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR----PDLVTYNALINGLCKVGDLKEAR 388
++ +I G CKDG ++ +Q +L++G P TY L+ LCK D +AR
Sbjct: 342 RTSYNAIIHGLCKDGG---CMRAYQ-LLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 389 KLLNEM--------------NARGL---------------------KPDKITFTTLMDGC 413
+L M RGL +PD+ T T+++G
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 414 CKDGDMESALEIKKRMV 430
CK G ++ A+++ M+
Sbjct: 458 CKMGRVDDAMKVLDDMM 474
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS-DEANHLFDEMCRRGLVPNG 333
KS +VE + R D + I+ +C R+ DEA + D +C RG P+
Sbjct: 31 KSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDS 90
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD-------------------------- 367
+ +++I C G+ D A ++F + L G PD
Sbjct: 91 LNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHR 150
Query: 368 -----------LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
L YN L+N LC + + +A KL+ +M RG PD +TFTTL+ G C+
Sbjct: 151 LIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
++E A ++ M GI +++ ++
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSV 237
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 235 MHGFCKVG-DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
+H C V + A + D + R RP ++ +++I C +G +E R + +
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMC--RRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T + +I L + + ++ VP+ + L++ C +V
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID 180
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A K M ++G PD+VT+ LI G C++ +L+ A K+ +EM G++P+ +T + L+
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 412 GCCKDGDMESALEIKKRMVE 431
G K D+E+ ++ K + E
Sbjct: 241 GFLKMRDVETGRKLMKELWE 260
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V +N L+ G C G A + DEI + L+P ++FN L+ G EEG ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M + + D+ +++A + GL E++S+E LFD++ L P+ TFT +I G
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+GK+D A+ ++ + G RP +N+L+ +CK GDL+ A +L E+ A+ L D+
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 406 FTTLMDGCCKDGDMESALEI 425
++D K + A EI
Sbjct: 355 LQEVVDALVKGSKQDEAEEI 374
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
Query: 213 WEFYLEILE--CGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+E+ EILE YP K +++ + +VG +A+ VFDE+P+R + T +SFN
Sbjct: 87 FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
Query: 269 LISGYCKSGNVE--EGF--RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
L++ S + EG L G + E PDV +++ LI GLC + EA L DE+
Sbjct: 147 LLNACVNSKKFDLVEGIFKELPGKLSIE---PDVASYNTLIKGLCGKGSFTEAVALIDEI 203
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
+GL P+ +TF L+ GK + + + M+++ ++ D+ +YNA + GL
Sbjct: 204 ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+E L +++ LKPD TFT ++ G +G ++ A+ K + + G
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 288 VMESERIFPDVFT---FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
++E + +P++ + +IN + + A +FDEM R ++F L++
Sbjct: 93 ILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACV 152
Query: 345 KDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
K DL F+ + + I PD+ +YN LI GLC G EA L++E+ +GLKPD
Sbjct: 153 NSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDH 212
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
ITF L+ G E +I RMVE+ ++ D ++
Sbjct: 213 ITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 159 LVFDVLI-SAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ F++L+ +YT F + R+V +KN++ +R+ L + +
Sbjct: 213 ITFNILLHESYTKGKFEEGEQIWARMV-EKNVKRDIRSYNARLLGLAMENKSEEMVSLFD 271
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ P V+ F ++ GF G + A + EI K RP FN+L+ CK+G
Sbjct: 272 KLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
++E + L + ++R+ D +++ L K S+ DEA + +
Sbjct: 332 DLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 2/228 (0%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
++LL V+ K +F + + V ++ LI G +AV I +
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWE-FYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
K L+ P N+L + K E + ++E + +N + G
Sbjct: 205 NKGLK-PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
+FD++ +L+P V +F +I G+ G ++E +E P F F++L
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
+ +CK + A L E+ + L+ + ++D K K D A
Sbjct: 324 LPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
V FN L+ + + A F E+P++ + P +V++NT+I C+ G++++ +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
+E PD+ +F+ L+ + E + ++D M + L PN ++ + + G ++
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
K AL +M +GI PD+ TYNALI +L+E K NEM +GL PD +T+
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGI 434
L+ CK GD++ A+E+ + ++ +
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 3/212 (1%)
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR-LKGVMES 291
+L++G+ G A +FDE+P+ TV SFN L+S Y S ++E + K + E
Sbjct: 129 MLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
I PD+ T++ +I LC++ D+ +F+E+ + G P+ ++F TL++ +
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
+ + +M + + P++ +YN+ + GL + +A L++ M G+ PD T+ L+
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALIT 306
Query: 412 GCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
D ++E ++ M E+G+ D V + M
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 34/239 (14%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+++V F+ L+SAY +S +D+A++ + ++P +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFK-------ELPEK-------------------- 186
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
G P + +N ++ C+ G + +F+E+ K P ++SFNTL+ +
Sbjct: 187 -------LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFY 239
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ EG R+ +M+S+ + P++ ++++ + GL + + +A +L D M G+ P+
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVH 299
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ LI D ++ +K + M ++G+ PD VTY LI LCK GDL A ++ E
Sbjct: 300 TYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 6/230 (2%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
++LL V+ K A F + + ++ ++ +I A G MDD + +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 186 KKNLQIPLRACENLLR--YMMKVKPPGPS-WEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
K + L + LL Y ++ G W+ + P + +N + G +
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 243 DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFS 302
A + D + + P V ++N LI+ Y N+EE + M+ + + PD T+
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 303 ALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
LI LCK+ D A + +E + L+ + +++ GK+D A
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 44/324 (13%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ V L+ AY G D+A + ++ + + ++AC L+ M + G +
Sbjct: 146 IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFK 205
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
++ + G Y + +++ C+ G++ A ++ E +V + T I+G C +G
Sbjct: 206 QLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTG 259
Query: 278 NVEE-----------------------GFRLKG-------------VMESERIF--PDVF 299
E+ G ++G ++E E I DV+
Sbjct: 260 ETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
A+I+ CK EA D+M +GL N V + ++ CK AL+KF+
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
D I D V YN + L K+G ++EA +LL EM RG+ PD I +TTL+DG C G +
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 420 ESALEIKKRMVEEGIELDAVAFTM 443
AL++ M+ G+ D + + +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNV 463
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+E+ E G+ VY ++ +CK ++ A D++ + L+ V + ++ YCK
Sbjct: 307 IEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
E IF D ++ + L K R +EA L EM RG+VP+ + +
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINY 426
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TTLIDG C GKV AL M+ G+ PDL+TYN L++GL + G +E ++ M A
Sbjct: 427 TTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA 486
Query: 397 RGLKPDKITFTTLMDGCC 414
G KP+ +T + +++G C
Sbjct: 487 EGPKPNAVTNSVIIEGLC 504
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 234 LMHGFCKVGDIRSARLVFD--EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+ G+C+ G + A F E P RK + F+ I GY +E+ + M +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY-----LEKAHDVLKKMSA 584
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
R+ P +I CK + EA LFD M RGL+P+ T+T +I C+ ++
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKV-----------GDL--KEARKLLNEMNARG 398
A F+ M +GI+PD+VTY L++ K+ G++ ++A ++L E +A G
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ D + +T L+D CK ++E A E+ RM++ G+E D VA+T
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
EN ++ G S + Y + YP + ++ L C G + A V ++
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
++ P +I +CK NV E L M + PD+FT++ +I+ C+ + +
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLID----------------GQCKDGKVDLALKKFQIML 360
A LF++M +RG+ P+ VT+T L+D G+ K L++F
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA-- 702
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
GI D+V Y LI+ CK+ +L++A +L + M GL+PD + +TTL+ + G ++
Sbjct: 703 -AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Query: 421 SALEI 425
A+ +
Sbjct: 762 MAVTL 766
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 30/314 (9%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL-LRYMMKVKPPGPSWEFYL 217
++ +++ Y +A++ + R N+ + R C N+ + K+ ++E
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLD-RVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ + G P V + L+ G+C G + A + DE+ + P ++++N L+SG ++G
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM------------- 324
+ EE + M++E P+ T S +I GLC + EA F +
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVK 532
Query: 325 --CRRGLVPNGV-------------TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
C GL + L C +G ++ A + M + P
Sbjct: 533 GYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+I CK+ +++EA+ L + M RGL PD T+T ++ C+ +++ A + + M
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 430 VEEGIELDAVAFTM 443
+ GI+ D V +T+
Sbjct: 653 KQRGIKPDVVTYTV 666
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 172 GFMDDAVQCIRLVRK--KNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVY 229
GF D C+ ++ + KN+ +P + F ++L G
Sbjct: 313 GFGLDVYACLAVIDRYCKNMNLP------------------EALGFLDKMLGKGLKVNCV 354
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+ ++++ +CK+ A F E + V +N K G VEE F L M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ I PDV ++ LI+G C + + +A L DEM G+ P+ +T+ L+ G ++G
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ L+ ++ M +G +P+ VT + +I GLC +KEA + + +
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESER 293
++ FCK+ ++R A+++FD + +R L P + ++ +I YC+ +++ L M+
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 294 IFPDVFTFSALINGLCK-------------ESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
I PDV T++ L++ K E +A+ + E G+ + V +T LI
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
D QCK ++ A + F M+D G+ PD+V Y LI+ + G + A L+ E++ +
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 9/222 (4%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N LM+ + G I +F ++ + L ++ ++ C+ GN+EE L ++E+
Sbjct: 185 NFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML--LIEN 242
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG---VTFTTLIDGQCKDGK 348
E VF + INGLC +++A L E+ R + ++ G C + K
Sbjct: 243 E----SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMK 298
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ A M + G D+ A+I+ CK +L EA L++M +GLK + + +
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
++ CK ALE K + I LD V + + A+ K
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 121/228 (53%), Gaps = 22/228 (9%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDE--IPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P VY +N +++ C+VG+ + AR + D+ +P + P ++ LIS YC+ G ++ G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG-MQTGC 256
Query: 284 R---LKGVMESERIF---------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
R + + E+ R+F PDV T++ LI+G CK +R A LF++M +G VP
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIM--LDQGIRPDLVTYNALINGLCKVGDLKEARK 389
N VT+ + I +++ A++ + M L G+ P TY LI+ L + EAR
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARD 375
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL--EIKKRMVEEGIE 435
L+ EM GL P + T+ + D +G + S L E+ KRM EGI+
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCDALSSEG-LASTLDEELHKRM-REGIQ 421
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME--S 291
LM + G ++ A F + + +P V ++NT+I+ C+ GN ++ L M+
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 292 ERIFPDVFTFSALINGLCK-----------ESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
R PD +T++ LI+ C+ R EAN +F EM RG VP+ VT+ LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
DG CK ++ AL+ F+ M +G P+ VTYN+ I +++ A +++ M G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 401 -PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
P T+T L+ + A ++ MVE G+
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 262 TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
T S L+ + G V+E M+ PDV+ ++ +IN LC+ +A L
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 322 DEMCRRGLV--PNGVTFTTLIDGQCKDG-----------KVDLALKKFQIMLDQGIRPDL 368
D+M G P+ T+T LI C+ G ++ A + F+ ML +G PD+
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
VTYN LI+G CK + A +L +M +G P+++T+ + + ++E A+E+ +
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 429 MVEEG 433
M + G
Sbjct: 344 MKKLG 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
+ + L+ L +E EA F M P+ + T+I+ C+ G KK + +
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGN----FKKARFL 222
Query: 360 LDQ----GIR--PDLVTYNALINGLCKVG-----------DLKEARKLLNEMNARGLKPD 402
LDQ G R PD TY LI+ C+ G + EA ++ EM RG PD
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+T+ L+DGCCK + ALE+ + M +G + V +
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 309 CKESRSDEANHLFD---EMCRRGLVPNGVT---FTTLIDGQCKDGKVDLALKKFQIMLDQ 362
C ++ ++ L+D ++ RR N VT T L+ ++G V AL F M +
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK--PDKITFTTLMDGCCKDGDME 420
+PD+ YN +IN LC+VG+ K+AR LL++M G + PD T+T L+ C+ G M+
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG-MQ 253
Query: 421 SALE--IKKRMVE 431
+ I++RM E
Sbjct: 254 TGCRKAIRRRMWE 266
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 55/327 (16%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
VFD+LI + DS +D AV +R +R + + + C L+ + + + ++ Y E
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222
Query: 219 IL-------------------------------------------------ECGYPPKVY 229
+ E G P VY
Sbjct: 223 VFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+NVLM +C G + A V++E+ R + +V++NT+I G C + V + L M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ I T+ L+NG CK D ++ EM R+G +G+T L++G C D
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 350 DLALKKFQIMLDQGIR-----PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
++ I+ D +R P Y L+ LC+ G + A + EM +G KP +
Sbjct: 403 QRVVEAADIVKD-AVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVE 431
T+ +DG GD E++ + M E
Sbjct: 462 TYRAFIDGYGIVGDEETSALLAIEMAE 488
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 222 CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE 281
CG P ++F++L+ +I A +V ++ R + + + N LI+ +
Sbjct: 158 CGSAP--FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASN 215
Query: 282 GFRLK---------GVMESER----IFPDVFTFSALINGLCKESRSDEANHLFDEMCRR- 327
G+++ V E+++ I P+ TF++++ +E ++ ++ EM
Sbjct: 216 GYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEV 275
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G PN ++ L++ C G + A K ++ M +G+ D+V YN +I GLC ++ +A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
++L +M +G++ +T+ L++G CK GD++S L + + M +G E D +
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI 389
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E L + P V N+L+ GF + GD+ + L + E+ KR +P V++ I G+CK
Sbjct: 199 FEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
N E RL M+ V + LI+G +A LFDE+ +RGL P+ +
Sbjct: 259 RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAY 318
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD--LKEARKLLNEM 394
L+ K G V A+K + M ++GI PD VT++++ G+ K + + +M
Sbjct: 319 NALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKM 378
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
R L P T LM C +G++ L++ K M+E+G
Sbjct: 379 KERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 12/261 (4%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYL--FNVLMHGFCKVGDIRSARLVFDEI 254
E L + +++ +W E+ + YP + ++L+ K G F ++
Sbjct: 107 EKTLHILARMRYFDQAWALMAEVRK-DYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 255 PKRKLRPT--VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
K R V FN L+ +C ++E + + S R PDV T + L+ G KE+
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHS-RFNPDVKTMNILLLGF-KEA 223
Query: 313 RSDEANHLF-DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM--LDQGIRPDLV 369
A LF EM +RG PN VT+ IDG CK AL+ F+ M LD I ++
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T LI+G + +AR+L +E++ RGL PD + LM K GD+ A+++ K M
Sbjct: 284 T--TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
Query: 430 VEEGIELDAVAFTMEEVAMQK 450
E+GIE D+V F + M K
Sbjct: 342 EEKGIEPDSVTFHSMFIGMMK 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 33/243 (13%)
Query: 137 GHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
G +A+ LF + + + + + + I + +A++ + + + I ++
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
L+ + + + + EI + G P +N LM K GD+ A V E+ +
Sbjct: 284 TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEE 343
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+ + P V+F+++ G KS E GF NG+C+
Sbjct: 344 KGIEPDSVTFHSMFIGMMKSK--EFGF----------------------NGVCE------ 373
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
+ +M R LVP T L+ C +G+V+L L ++ ML++G P L
Sbjct: 374 ---YYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Query: 377 GLC 379
LC
Sbjct: 431 ALC 433
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 38/326 (11%)
Query: 115 WLATRPPFRE---AHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDS 171
W + ++ A++ + ++R GH A+ + + S F++LI + D+
Sbjct: 147 WAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADN 206
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
++ L++ + Y ++ + G+ P+V+L+
Sbjct: 207 --------------RRGLRV---------------------YYVYEKMKKFGFKPRVFLY 231
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N +M K G A V+++ + L +F L+ G CK+G +EE + M
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PDVF ++A+I L E D + ++DEM R + P+ + + TL+ G CKDG+V+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
+ F M + I D Y LI G G ++ A L ++ G D + ++
Sbjct: 352 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 412 GCCKDGDMESALEIKKRMVEEGIELD 437
G C ++ A ++ + +EE +E D
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPD 437
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 161/367 (43%), Gaps = 50/367 (13%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RPP + +L + + G ++ + V +++ ++ A +G+ D A+
Sbjct: 189 RPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLAL 248
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKP--PGPSWEFYLEILE------CGYPPKVYL 230
++ L E +M+ VK E LEIL+ C P V+
Sbjct: 249 AVYEDFKEDGL------VEESTTFMILVKGLCKAGRIEEMLEILQRMRENLC--KPDVFA 300
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+ ++ G++ ++ V+DE+ + +++P V+++ TL+ G CK G VE G+ L M+
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK 360
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++I D + LI G + + A +L++++ G + + + +I G C +VD
Sbjct: 361 GKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD 420
Query: 351 LALKKFQIMLDQGIRPDLVTYNALI-------------NGLCKVGD--------LKEARK 389
A K FQ+ +++ + PD T + ++ N L ++G+ L + K
Sbjct: 421 KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFK 480
Query: 390 LL---NEMNARGLKPDKI----------TFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
LL E NA L I + LM+ K GD++ +L + M + G E
Sbjct: 481 LLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEP 540
Query: 437 DAVAFTM 443
D+ ++++
Sbjct: 541 DSSSYSI 547
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 2/182 (1%)
Query: 272 GYC--KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
YC ++G+ +L +M+S+ P F LI R +++++M + G
Sbjct: 165 AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGF 224
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
P + ++D K+G DLAL ++ + G+ + T+ L+ GLCK G ++E +
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLE 284
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQ 449
+L M KPD +T ++ +G+++++L + M + I+ D +A+ V +
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 450 KE 451
K+
Sbjct: 345 KD 346
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+ + K+ S + E+ + G+ P +++ + F + GD+++A ++I +
Sbjct: 513 LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLK----GVMESERIFPDVFTFSALINGLCKESRS 314
P++ ++ +L G C+ G ++ L G +ES P F ++ + +CK S +
Sbjct: 573 CVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG---PMEFKYALTVCHVCKGSNA 629
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA------LKKFQIMLDQGIRPDL 368
++ + DEM + G+ N V + +I G K G + +A LKK ++M + D+
Sbjct: 630 EKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTE----ADM 685
Query: 369 VTYNALI 375
V Y ++
Sbjct: 686 VVYEEML 692
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 110/272 (40%), Gaps = 38/272 (13%)
Query: 205 KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
KV+ WE ++++ GY + ++N ++ G C V + A +F + +L P
Sbjct: 383 KVRSACNLWE---DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 265 SFNTLIS---------------------GYCKSGNVEEGFRLKGVMESERIFP-DVF--- 299
+ + ++ GY S + + F+L E + DVF
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYIL 499
Query: 300 ---------TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++ L+ L K ++ LF EM + G P+ +++ I + G V
Sbjct: 500 KTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVK 559
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE-MNARGLKPDKITFTTL 409
A + +++ P + Y +L GLC++G++ L+ E + P + +
Sbjct: 560 AACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALT 619
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ CK + E +++ M +EG+ ++ V +
Sbjct: 620 VCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY 651
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 103/235 (43%), Gaps = 6/235 (2%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I E GYP YL C + + L I K K +V +N L+ K G+
Sbjct: 464 IGELGYPVSDYLTQ-FFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGD 522
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+++ L M PD ++S I ++ A +++ VP+ + +
Sbjct: 523 IQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLS 582
Query: 339 LIDGQCKDGKVD---LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
L G C+ G++D L +++ ++ G P Y + +CK + ++ K+++EMN
Sbjct: 583 LTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMN 640
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
G+ +++ + ++ G K G ++ A E+ + + + +A EE+ +++
Sbjct: 641 QEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQ 695
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 2/301 (0%)
Query: 127 SLLCFLVSRKGHGSA-SSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
S+ ++R+ H A S L F+Q P +S I Y + +D ++Q R +
Sbjct: 79 SVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLE 138
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC-GYPPKVYLFNVLMHGFCKVGDI 244
+ + +++ LL + K + YLE+ + G P + +N ++ C+ G
Sbjct: 139 QYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGST 198
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
S+ + E+ ++ ++PT SF +I G+ K +E ++ +M+ + V T++ +
Sbjct: 199 SSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIM 258
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I LCK +S EA L D + + PN VT++ LI G C + +D A+ F++M+ G
Sbjct: 259 IQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY 318
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
+PD Y LI+ LCK GD + A L E + P L++G ++ A E
Sbjct: 319 KPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKE 378
Query: 425 I 425
+
Sbjct: 379 L 379
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF---PDVFTFSALINGLC 309
EIP+ TV S N L+ + + +E R+ +E +++ PD+ T++ +I LC
Sbjct: 141 EIPR-----TVKSLNALLFACLMAKDYKEANRV--YLEMPKMYGIEPDLETYNRMIRVLC 193
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ + + + EM R+ + P +F +IDG K+ K D K ++M + G+ +
Sbjct: 194 ESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVA 253
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYN +I LCK EA+ L++ + + ++P+ +T++ L+ G C + +++ A+ + + M
Sbjct: 254 TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Query: 430 VEEGIELDA 438
V G + D+
Sbjct: 314 VCNGYKPDS 322
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G V +N+++ CK A+ + D + ++RP V+++ LI G+C N++
Sbjct: 245 EFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLD 304
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E L VM PD + LI+ LCK + A L E + VP+ L+
Sbjct: 305 EAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLV 364
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIR 365
+G KVD A + ++ ++ R
Sbjct: 365 NGLASRSKVDEAKELIAVVKEKFTR 389
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A SLF S T + + ++ +Y ++D V+ + + K L+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 201 RYMMKVKPPGPSWEFYLEILEC----GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
+ P S +L G P ++ + C+ G + A+ + E+ +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE-RIFPDVFTFSALINGLCKESRSD 315
+ P ++N L+ CK ++ + M + + PD+ +F+ LI+ +C
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
EA +L ++ G P+ + T++ G C K A+ ++ M ++G+ PD +TYN LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
GL K G ++EAR L M G +PD T+T+LM+G C+ G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGD--IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ P F +L+ C+ D I + V + + L P V+ + + C++G V+
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPNGVTFTTL 339
E L + + PD +T++ L+ LCK DEM + P+ V+FT L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
ID C + A+ + + G +PD YN ++ G C + EA + +M G+
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+PD+IT+ TL+ G K G +E A K MV+ G E D +T
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY-MMKVKPPG 210
+ TQ + F++L+ A G + + +R +R + P N+L + +V+ P
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPK 285
Query: 211 PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR---PTVVSFN 267
+ + E++E G+ P+ + + + FC+ G + A +FD + + PT +F
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
+I K+ EE F L G M S PDV T+ +I G+C + DEA DEM +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G P+ VT+ + C++ K D ALK + M++ P + TYN LI+ ++ D A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
EM+ R D T+ +++G + A + + +V +G++L
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
K +P + +FN L+ CK G V+EG L M R+ PD TF+ L G C+ +A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKA 287
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR---PDLVTYNAL 374
L +EM G P T+ ID C+ G VD A F M+ +G P T+ +
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I L K +E +L+ M + G PD T+ +++G C ++ A + M +G
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 435 ELDAVAFT 442
D V +
Sbjct: 408 PPDIVTYN 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+E ++ G P V + ++ G C + A DE+ + P +V++N +
Sbjct: 361 FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
C++ +E +L G M R P V T++ LI+ + D A + + EM +R V +
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
T+ +I+G + A + ++++G++ +++ + L +VG+LK K+
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 540
Query: 393 EM 394
M
Sbjct: 541 HM 542
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 12/326 (3%)
Query: 123 REAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR 182
RE HS++ L + +A +L + P+ + ++I Y + A+
Sbjct: 162 REYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG---YPPKVYLFNVLMHGFC 239
++ L++ + ++LL + + K + ++ C YP FN++++G+C
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGH----LIFCNKDKYPFDAKSFNIVLNGWC 277
Query: 240 KV-GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
V G R A V+ E+ ++ VVS++++IS Y K G++ + +L M+ E I PD
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 299 FTFSALINGLCKESRSDEANHLFDEM-CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
++A+++ L K S EA +L M +G+ PN VT+ +LI CK K + A + F
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
ML++G+ P + TY+A + + + G+ E +LL +M G +P T+ L+ C+
Sbjct: 398 EMLEKGLFPTIRTYHAFMR-ILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 418 DMESALEIKKRMVEEGIELDAVAFTM 443
D ++ L + M E+ + D ++ +
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIV 480
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+ + + V+ + +IS Y+ G ++ ++ ++K+ ++ P R N + + +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE-PDRKVYNAVVHALAKAS 351
Query: 209 PGPSWEFYLEILE--CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
++ +E G P V +N L+ CK A+ VFDE+ ++ L PT+ ++
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
+ + ++G EE F L M P V T+ LI LC+ D L+DEM
Sbjct: 412 HAFMR-ILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
+ + P+ ++ +I G +GK++ A ++ M D+G+RP+
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYLEILEC-GYPPKVYLFNVLMHGFCKVGDIRSARL 249
+ L ++R + K + + +LE+ + G N LM K I A
Sbjct: 201 VTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHE 260
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
VF ++ ++P +FN LI G+CK+ ++ + +M+ PDV T+++ + C
Sbjct: 261 VFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
KE N + +EM G PN VT+T ++ K +V AL ++ M + G PD
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
Y++LI+ L K G K+A ++ +M +G++ D + + T++ E AL + KRM
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Query: 430 VEE 432
+E
Sbjct: 440 EDE 442
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKR-KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
+M K G A F E+ K ++ ++ N+L+ K ++E + + +
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV-FLKLFD 267
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
I PD TF+ LI+G CK + D+A + D M P+ VT+T+ ++ CK+G
Sbjct: 268 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ + M + G P++VTY +++ L K + EA + +M G PD +++L+
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 413 CCKDGDMESALEIKKRMVEEGIELDAVAF-TMEEVAMQ 449
K G + A EI + M +G+ D + + TM A+
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 117/305 (38%), Gaps = 74/305 (24%)
Query: 195 ACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
A +L+ ++K + E +L++ + P FN+L+HGFCK AR + D +
Sbjct: 241 AMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLM 299
Query: 255 PKRKLRPTVVSFNTLISGYCKSGN-----------------------------------V 279
+ P VV++ + + YCK G+ V
Sbjct: 300 KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E + M+ + PD +S+LI+ L K R +A +F++M +G+ + + + T+
Sbjct: 360 AEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTM 419
Query: 340 IDGQCKDGKVDLALKKFQIMLDQ------------------------------------- 362
I + ++AL+ + M D+
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 363 -GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
+ D+ TY LI GLC G ++EA E +G+ P T L+D K E+
Sbjct: 480 NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEA 539
Query: 422 ALEIK 426
L+I+
Sbjct: 540 KLKIQ 544
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 46/331 (13%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKN----LQIPLRACENLLRYMMK---VKPP 209
S F VLI Y +G + A++ R LR E LL + K V+
Sbjct: 172 SADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA 231
Query: 210 GPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
E ++ + P V +FN+L++G+ + ++ A +++E+ ++PTVV++ TL
Sbjct: 232 SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 270 ISGYCKSGNVE-----------------------------EGFRLK---GVMESERIF-- 295
I GYC+ V+ E RL G+ME R F
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME--RFFVC 349
Query: 296 ---PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
P + T+++L+ CK A+ + M RG+ P T+ K K +
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ + +++ G PD +TY+ ++ LC+ G L A ++ EM RG+ PD +T T L+
Sbjct: 410 MNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHL 469
Query: 413 CCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
C+ +E A E V GI + F M
Sbjct: 470 LCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 145/286 (50%), Gaps = 3/286 (1%)
Query: 135 RKGHGSASSLFASFLQ-TMPTQQ--SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
++GH +S++ + TM + SV +F++L++ + S + A + ++ N++
Sbjct: 224 KEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKP 283
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
+ L+ +++ + E E+ +FN ++ G + G + A +
Sbjct: 284 TVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMM 343
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
+ + PT+V++N+L+ +CK+G++ ++ +M + + P T++ K
Sbjct: 344 ERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKH 403
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
++++E +L+ ++ G P+ +T+ ++ C+DGK+ LA++ + M ++GI PDL+T
Sbjct: 404 NKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTT 463
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
LI+ LC++ L+EA + + RG+ P ITF + +G G
Sbjct: 464 TMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
++ M + +V+ + LI Y + A++ + ++ ++I ++ + +
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ C P + +N L+ FCK GD+ A + + R + PT ++N
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+ K EEG L + PD T+ ++ LC++ + A + EM RG
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ +T T LI C+ ++ A ++F + +GI P +T+ + NGL G A+
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAK 515
Query: 389 KLLNEMNA 396
+L + M++
Sbjct: 516 RLSSLMSS 523
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI-PKRKLRPTVVSFN 267
PG S E L+ E G P V L + L + + + E+ P L P++ F+
Sbjct: 84 PGSSLESALD--ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSL--FD 139
Query: 268 TLISGYCKSGNVEEGF-----RLKGVMESERIFPDVFTFSALIN-----GLCKES-RSDE 316
++++ CK+ E + R++ S + D TF LI G+ +++ R+ E
Sbjct: 140 SVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQAIRAFE 197
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV---DLALKKFQIMLDQGIRPDLVTYNA 373
++ +C+ L+D CK+G V + L++ +D P + +N
Sbjct: 198 FARSYEPVCKSATELR--LLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
L+NG + LK+A KL EM A +KP +T+ TL++G C+ ++ A+E+ + M
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 434 IELDAVAFT 442
+E++ + F
Sbjct: 316 MEINFMVFN 324
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F+ +I Y+D+G + V+ ++ ++I + C L + + + +F+ ++
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 221 ECGYPP-KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK-LRPTVVSFNTLISGYCKSGN 278
E G VY V++ C G+I AR + +E+ K ++ +V+F ++I K +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
EE + +ME E + D+ ++ LI+G + +EA L M + L +
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+++G + G V+ ++ + M +G+ P+ TY L+NGLCK G + EA LNE+
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+ D+ ++TL + C + G ++ +LE+ M+ +G
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDG 416
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 44/361 (12%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFAS-FLQTMPT-QQSVLVFDVLISAYTDSG 172
WL R ++ ++ G + SL F + PT V V++ ++ Y+ SG
Sbjct: 180 WLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSG 239
Query: 173 FMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE----CGYPPKV 228
A + + +R++ L + L+ ++K G + +E+L+ G P
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVELLDMVRNSGLRPDA 297
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+N L+ + ++ A VF+++ + +P + ++N +IS Y + G E RL
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL------------------- 329
+E + FPD T+++L+ +E +++ ++ +M + G
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 330 -----------------VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
P+ +T+T LID K + A MLD GI+P L TY+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
ALI G K G +EA + M G KPD + ++ ++D + + A + + M+ +
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 433 G 433
G
Sbjct: 538 G 538
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRS--ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P + FN L++ K G + A + D + LRP +++NTL+S + N++
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
++ ME+ R PD++T++A+I+ + + EA LF E+ +G P+ VT+ +L+
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA-RGL 399
++ + + +Q M G D +TYN +I+ K G L A +L +M G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
PD IT+T L+D K A + M++ GI+
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ E + ++ ++N ++ + + D + V+ I + L P ++NTLI YC+
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
EEG+ L M + + P + T+ +LI+ K+ ++A LF+E+ +GL + +
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH 1036
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
T++ G A K Q+M + GI P L T + L+ G+ +EA K+L+ +
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDT 1096
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ + +++++D + D S +E M +EG+E D +T
Sbjct: 1097 EVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWT 1141
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 202 YMMKVKPPGP-SWEFYLEILEC-----GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
Y VK G SW+ LE+ E + P + ++ + A +F
Sbjct: 159 YCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT--- 215
Query: 256 KRKLRPTVVS----FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
+ PTV +N ++ Y +SG + L M PD+ +F+ LIN K
Sbjct: 216 --RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKS 273
Query: 312 S--RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ A L D + GL P+ +T+ TL+ +D +D A+K F+ M +PDL
Sbjct: 274 GGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLW 333
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
TYNA+I+ + G EA +L E+ +G PD +T+ +L+ ++ + E E+ ++M
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 430 VEEGIELDAVAF 441
+ G D + +
Sbjct: 394 QKMGFGKDEMTY 405
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 149/384 (38%), Gaps = 78/384 (20%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
+LL V+ + + AS +F+ L+ + S V ++ Y GF + A Q +
Sbjct: 685 ETLLHCCVANEHYAEASQVFSD-LRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL----ECGYPPKVYLFNVLMHGFCKV 241
K AC + +++ W+ ++ + G P + +N LM + +
Sbjct: 744 TKGFHF---ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE-----------GFRLK---- 286
G AR +F+ + + PTV S N L+ C G +EE GF++
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 287 -----------GVMESERIF---------PDVFTFSALINGLCKESRS----------DE 316
+ E ++I+ P + + +I LCK R +E
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 317 AN-------------------------HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
AN ++ + GL P+ T+ TLI C+D + +
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
Q M + G+ P L TY +LI+ K L++A +L E+ ++GLK D+ + T+M
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 412 GCCKDGDMESALEIKKRMVEEGIE 435
G A ++ + M GIE
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIE 1064
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 3/264 (1%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q + ++ +IS Y G +A + + K +LL + + E
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR-PTVVSFNTLISGY 273
Y ++ + G+ +N ++H + K G + A ++ ++ R P +++ LI
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
K+ E L M I P + T+SALI G K + +EA F M R G P+
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+ ++ ++D + + A ++ M+ G P Y +I GL K + +K + +
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRD 568
Query: 394 MNAR-GLKPDKITFTTLMDGCCKD 416
M G+ P +I+ + L+ G C D
Sbjct: 569 MEELCGMNPLEIS-SVLVKGECFD 591
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 128 LLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
+L + G+ + + S L M + +V+ + L+ +Y G ++A R ++
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 188 NLQIPLRACENLLRYMM---KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+ + +L+ + K K +E L+ + P +++++++ + K G+
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
AR VF + + + + V++N+L+S V ++ M+ I PDV +++ L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 320
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I + R +EA +F+EM G+ P + L+D G V+ A F+ M I
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
PDL +Y +++ D++ A K + G +P+ +T+ TL+ G K D+E +E
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440
Query: 425 IKKRMVEEGIELDAVAFT 442
+ ++M GI+ + T
Sbjct: 441 VYEKMRLSGIKANQTILT 458
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ Y ++ P V + +L+ + + A VF+E+ +RPT ++N L+ +
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
SG VE+ + M +RIFPD+++++ +++ S + A F + G PN
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+ TLI G K V+ ++ ++ M GI+ + +++ + + A E
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
M + G+ PD+ L+ ++E A E+
Sbjct: 480 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 121 PFREAHSLLCFLVSRKG-HGSASSLFASFL-QTMPTQQSVLVFDVLIS---AYTDSGFMD 175
P ++ + ++ ++ + G + A +F+S + + +P QS + ++ L+S +Y + +
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP--QSTVTYNSLMSFETSYKEVSKIY 302
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
D +Q + ++Q + + L++ + + + + E+L+ G P +N+L+
Sbjct: 303 DQMQ------RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
F G + A+ VF + + ++ P + S+ T++S Y + ++E + ++ +
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID--GQCKDGKVDLAL 353
P++ T+ LI G K + ++ ++++M G+ N TT++D G+CK+ AL
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSAL 474
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
++ M G+ PD N L++ +L+EA++L
Sbjct: 475 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 213 WEFYLEILECGYPPKVYLFN-----VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
W EILE + F+ +L+ + K+G+ A V + K P V+S+
Sbjct: 119 WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYT 178
Query: 268 TLISGYCKSG---NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
L+ Y + G N E FR M+S P T+ ++ + + EA +F+ +
Sbjct: 179 ALMESYGRGGKCNNAEAIFRR---MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 325 C---RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+ L P+ + +I K G + A K F M+ +G+ VTYN+L++
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET-- 293
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
KE K+ ++M ++PD +++ L+ + E AL + + M++ G+
Sbjct: 294 -SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+ F LI+ Y K GN R+ V+ P+V +++AL+ + + + A +F
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG---IRPDLVTYNALINGLCK 380
M G P+ +T+ ++ + K A + F+ +LD+ ++PD Y+ +I K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G+ ++ARK+ + M +G+ +T+ +LM + + +I +M I+ D V+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVS 316
Query: 441 FTM 443
+ +
Sbjct: 317 YAL 319
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 145/315 (46%), Gaps = 11/315 (3%)
Query: 135 RKGHGSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP 192
RK SA ++ F + + S VF L+ ++ D G ++A+ + KK ++
Sbjct: 319 RKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSN 378
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
L+ K + E+ + G P +N+LM + + +
Sbjct: 379 TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEG-----FRLKGVMESERIFPDVFTFSALING 307
E+ L P V S+ LIS Y ++ + + R+K V + P +++ALI+
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV----GLKPSSHSYTALIHA 494
Query: 308 LCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
++A F+EMC+ G+ P+ T+T+++D + G ++ +++ML + I+
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
+TYN L++G K G EAR +++E + GL+P +T+ LM+ + G ++ K
Sbjct: 555 RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 428 RMVEEGIELDAVAFT 442
M ++ D++ ++
Sbjct: 615 EMAALNLKPDSITYS 629
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 154/369 (41%), Gaps = 40/369 (10%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQS---VLVFDVLISAYTDS 171
W++ + P + L + G + L +P ++ V +++ IS + S
Sbjct: 227 WMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSAS 286
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKV-KPPGPSWEFYLEILECGYPPKVYL 230
DDA + + K N+ C L+ + K + WE + ++ E G +
Sbjct: 287 QRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV 346
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE------GFR 284
F L+ FC G A ++ E+ K+ +R + +NTL+ Y KS ++EE R
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 285 LKGV-----------------------------MESERIFPDVFTFSALINGLCKESR-S 314
KG+ ME + P+V +++ LI+ + + S
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
D A F M + GL P+ ++T LI G + A F+ M +GI+P + TY ++
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
++ + GD + ++ M +K +IT+ TL+DG K G A ++ + G+
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL 586
Query: 435 ELDAVAFTM 443
+ + + M
Sbjct: 587 QPSVMTYNM 595
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL--RYMMKVKPPGPS 212
+ + +V++ L+ AY S +++ +R K L+ P A N+L Y +++P
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLK-PSAATYNILMDAYARRMQPDIVE 434
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRS-ARLVFDEIPKRKLRPTVVSFNTLIS 271
E+ + G P V + L+ + + + A F + K L+P+ S+ LI
Sbjct: 435 -TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
Y SG E+ + M E I P V T++++++ + + + ++ M R +
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+T+ TL+DG K G A G++P ++TYN L+N + G + +LL
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
EM A LKPD IT++T++ + D + A K MV+ G
Sbjct: 614 KEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLR-YMMKVKPPGPSWEF 215
S +++L+ AY D +R + L+ +++ L+ Y K + +
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+L + + G P + + L+H + G A F+E+ K ++P+V ++ +++ + +
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRR 532
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
SG+ + + +M E+I T++ L++G K+ EA + E + GL P+ +T
Sbjct: 533 SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ L++ + G+ + + M ++PD +TY+ +I +V D K A M
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 396 ARGLKPDKITFTTL 409
G PD ++ L
Sbjct: 653 KSGQVPDPRSYEKL 666
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 13/293 (4%)
Query: 141 ASSLFASFLQTMPTQQ-SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENL 199
A S+F L + P+ + L + + AY G D Q +V K+ L+ +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 200 LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL 259
L + +W +L ++ G+ V +N ++ GF K G I A+ +FDE+P+R
Sbjct: 168 LHMYVTCGCLIEAWRIFLGMI--GF--DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN- 222
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
VS+N++ISG+ ++G ++ + M+ + + PD FT +L+N S++
Sbjct: 223 ---GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
+ + + R N + T LID CK G ++ L F+ + L +N++I GL
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC----APKKQLSCWNSMILGLA 335
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
G + A L +E+ GL+PD ++F ++ C G++ A E + M E+
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNL--QIPLR---ACENLLRYMMKVKPPGPS 212
V+ ++ +I + G +D A +NL ++P R + +++ ++ +
Sbjct: 192 VVAWNSMIMGFAKCGLIDQA---------QNLFDEMPQRNGVSWNSMISGFVRNGRFKDA 242
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+ + E+ E P + L++ +G R + + I + + + LI
Sbjct: 243 LDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDM 302
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
YCK G +EEG + +++ ++++I GL + A LF E+ R GL P+
Sbjct: 303 YCKCGCIEEGLNVFECAPKKQLS----CWNSMILGLANNGFEERAMDLFSELERSGLEPD 358
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEARKLL 391
V+F ++ G+V A + F++M ++ I P + Y ++N L G L+EA L+
Sbjct: 359 SVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
M ++ D + +++L+ C K G++E A
Sbjct: 419 KNMP---VEEDTVIWSSLLSACRKIGNVEMA 446
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYP---PKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
++R + P + ++++L C P P+ + + + ++G R R + +
Sbjct: 95 IIRGFSRSSFPEMAISIFIDML-CSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
K L NT++ Y G + E +R+ M I DV ++++I G K D
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLID 209
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
+A +LFDEM +R NGV++ ++I G ++G+ AL F+ M ++ ++PD T +L+
Sbjct: 210 QAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI-----KKRM- 429
N +G ++ R + + + + I T L+D CK G +E L + KK++
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 430 -------------VEE------------GIELDAVAF 441
EE G+E D+V+F
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEI--PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
+++N ++ GF + A +F ++ ++P +++ ++ Y + G +G +L
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 287 GVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
G++ E + D F + +++ EA +F M + + V + ++I G K
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKC 205
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
G +D A Q + D+ + + V++N++I+G + G K+A + EM + +KPD T
Sbjct: 206 GLIDQA----QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+L++ C G E I + +V EL+++ T
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT 297
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I E + P V + ++++ CK D +A + D + + LRPTV ++++I K G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
V E M I PD + +IN + R DEAN L +E+ + L P+ T+T
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI G K G ++ + ML+ G+ P++V Y ALI K GD K + L M
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 399 LKPDKITFTTLMDG 412
+K D I + TL+ G
Sbjct: 718 IKHDHIAYITLLSG 731
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P S+N++I + +E+ L +++ PDV T+ ++N LCK++ D A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
D M GL P ++++I K G+V A + F ML+ GI+PD + Y +IN +
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G + EA +L+ E+ L+P T+T L+ G K G ME + +M+E+G+ + V
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 441 FT 442
+T
Sbjct: 690 YT 691
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 95/181 (52%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P V ++ +++ CK + + F + ME + P V +S++I L K+ R EA
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
F +M G+ P+ + + +I+ ++G++D A + + ++ +RP TY LI+G K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
+G +++ + L++M GL P+ + +T L+ K GD + + + M E I+ D +A
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 441 F 441
+
Sbjct: 725 Y 725
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 6/262 (2%)
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGY---PPKVYLFN 232
+A C V+++ + L C+ L + + + L+ L CG P V L+
Sbjct: 184 EAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGM-LDTL-CGMTRMPLPVNLYK 241
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
L + FCK G A +FD + V + L+ YCK N+ RL M
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER 301
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
D F+ LI+G K D+ +F +M ++G+ N T+ +I CK+G VD A
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 353 LKKF-QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
L+ F + I ++ Y LI G K G + +A LL M G+ PD IT+ L+
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK 421
Query: 412 GCCKDGDMESALEIKKRMVEEG 433
K +++ A+ I + +++ G
Sbjct: 422 MLPKCHELKYAMVILQSILDNG 443
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 43/252 (17%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + ++LE G P + ++++ + + G I A + +E+ K LRP+ ++ LISG+
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
K G +E+G + M + + P+V ++ALI K+ + LF M + +
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQG------------------------------ 363
+ + TL+ G + KK Q++++ G
Sbjct: 723 IAYITLLSGLWRAMARK---KKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 364 ----------IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
I P+L +N +I G C G L EA L M G+ P+ +T+T LM
Sbjct: 780 MEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSH 839
Query: 414 CKDGDMESALEI 425
+ GD+ESA+++
Sbjct: 840 IEAGDIESAIDL 851
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 146/327 (44%), Gaps = 18/327 (5%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
L RP S++ L + A FA L++ Q + + ++I+ Y +G +D
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMIMINTYARNGRID 634
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+A + + V K L+ L+ +K+ ++ ++LE G P V L+ L+
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN--------VEEGFRLKG 287
F K GD + + +F + + ++ +++ TL+SG ++ VE G + K
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPG-KEKL 753
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
+ R P V S+L N K + + ++ ++PN T+I G C G
Sbjct: 754 LQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-----KKSIIPNLYLHNTIITGYCAAG 808
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++D A + M +GI P+LVTY L+ + GD++ A L N +PD++ ++
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNC---EPDQVMYS 865
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGI 434
TL+ G C AL + M + GI
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGI 892
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 13/226 (5%)
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ YL ++E + +FN L+HGF K+G + R++F ++ K+ ++ V +++ +I
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 272 GYCKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
YCK GNV+ RL SE I +V ++ LI G K+ D+A L M G+V
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ--GIRPDLVTYNALINGLCKVGDLK-EA 387
P+ +T+ L+ K ++ A+ Q +LD GI P ++ +G+++ +
Sbjct: 411 PDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID---------DLGNIEVKV 461
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LL E+ + + + C + +AL ++MV G
Sbjct: 462 ESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG 507
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
GY ++ LM +CK ++ A ++ + +R FNTLI G+ K G +++G
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF-DEMCRRGLVPNGVTFTTLID 341
+ M + + +VFT+ +I CKE D A LF + + N +T LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM--NARGL 399
G K G +D A+ MLD GI PD +TY L+ L K +LK A +L + N G+
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 400 KP 401
P
Sbjct: 447 NP 448
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I+ GY P ++++ C A F+++ +R + L G C G+
Sbjct: 157 IIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH 216
Query: 279 VEEGFRLKGVMESERIFP-DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ E + + P V + +L CK + EA LFD M G + V +T
Sbjct: 217 LNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ CKD + +A++ + M+++ D +N LI+G K+G L + R + ++M +
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKK 336
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEI 425
G++ + T+ ++ CK+G+++ AL +
Sbjct: 337 GVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 16/229 (6%)
Query: 183 LVRKKNLQIPLR-ACENLLRYMMKVKP----PGP-----SWEFYLEIL---ECGYPPKVY 229
+ RKK Q+ + E LL+ +++ KP P S F +E++ + P +Y
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLY 795
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
L N ++ G+C G + A + + K + P +V++ L+ + ++G++E L
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---F 852
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
E PD +S L+ GLC R +A L EM + G+ PN ++ L+ C
Sbjct: 853 EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
A+K + M I P + + LI LC+ L+EAR L M G
Sbjct: 913 MEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G P V +++ ++ K G + A F ++ + ++P +++ +I+ Y ++G ++
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E L + + P FT++ LI+G K ++ D+M GL PN V +T LI
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
K G + F +M + I+ D + Y L++GL + K+ R+++ E
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
K+ + P + NT+I+GYC +G ++E + M+ E I P++ T++ L+ + +
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 316 EANHLFDEM-CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
A LF+ C P+ V ++TL+ G C + AL M GI P+ +Y L
Sbjct: 847 SAIDLFEGTNCE----PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ LC EA K++ +M A + P I T L+ C++ + A + MV+ G
Sbjct: 903 LQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Query: 435 EL 436
L
Sbjct: 963 SL 964
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 96/246 (39%), Gaps = 37/246 (15%)
Query: 199 LLRYMMKVKPPGPSWEFYLE-ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
L+R + ++ PG + FY + ++ G P + + ++ K+ AR D I
Sbjct: 101 LIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRI--- 157
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
+ SGY S N + S +++ LC + R EA
Sbjct: 158 -----------IASGYAPSRN---------------------SSSLVVDELCNQDRFLEA 185
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT-YNALIN 376
H F+++ RG L G C G ++ A+ + P V Y +L
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
CK G EA L + M G DK+ +T LM CKD +M A+ + RMVE EL
Sbjct: 246 CFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFEL 305
Query: 437 DAVAFT 442
D F
Sbjct: 306 DPCIFN 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/320 (17%), Positives = 132/320 (41%), Gaps = 30/320 (9%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQC-IRLVRKKNLQIPLRACENLLRYMMKVKPPGPS 212
Q +V + ++I +Y G +D A++ + +++ + NL+ K +
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD-------------------- 252
+ + +L+ G P + VL+ K +++ A ++
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNI 457
Query: 253 ---------EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA 303
EI ++ V + + C N M + P F++++
Sbjct: 458 EVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNS 517
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
+I L +E+ ++ L + + VP+ T+ +++ CK D A M + G
Sbjct: 518 VIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG 577
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+RP + Y+++I L K G + EA + +M G++PD+I + +++ ++G ++ A
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 424 EIKKRMVEEGIELDAVAFTM 443
E+ + +V+ + + +T+
Sbjct: 638 ELVEEVVKHFLRPSSFTYTV 657
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 143/290 (49%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ LI+++ G D A+ ++ + + + L NL+ ++ + + +
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G P + +N +++ + K R ARL+ E+ + + P VS++TL+S Y ++
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E + M+ D+ T + +I+ + EA+ LF + + + PN V++ T++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+ A+ F++M + I ++VTYN +I K + ++A L+ EM +RG++
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
P+ IT++T++ K G ++ A + +++ G+E+D V + VA ++
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N+++ + ++ ++ A +F + K + P VVS+NT++ Y ++ E L +M+
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
+ I +V T++ +I K ++A +L EM RG+ PN +T++T+I K GK+D
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A FQ + G+ D V Y +I +VG + A++LL+E+ PD I T +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAIT 509
Query: 412 GCCKDGDMESALEIKKRMVEEGIELDAVAF 441
K G E A + ++ E G D F
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVF 539
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 46/246 (18%)
Query: 200 LRYMMKVKPPGPSWEFYLEIL-----ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
+R+M+ + W+ L +L E Y P V+ +NV++ + A +FDE+
Sbjct: 122 IRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN---GLCKE 311
+R L P +++TLI+ + K G + ME +R+ D+ +S LI LC
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
S+ A +F + R G+ P DLV Y
Sbjct: 242 SK---AISIFSRLKRSGITP-----------------------------------DLVAY 263
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
N++IN K +EAR L+ EMN G+ P+ ++++TL+ ++ AL + M E
Sbjct: 264 NSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 432 EGIELD 437
LD
Sbjct: 324 VNCALD 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 128/291 (43%), Gaps = 19/291 (6%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
A LF S L+ M + +V+ ++ ++ Y ++ +A+ RL+++K+++ +N++
Sbjct: 349 ADRLFWS-LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE------QNVV 401
Query: 201 RYMMKVKPPGPSWE------FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEI 254
Y +K G + E E+ G P ++ ++ + K G + A +F ++
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 255 PKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS 314
+ V + T+I Y + G + RL ++ PD I L K R+
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRT 517
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+EA +F + G V + F +I+ ++ + ++ F+ M G PD +
Sbjct: 518 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 375 INGLCKVGDLKEARKLLNEMNARG-LKPDKITFTTL-MDGCCKDGDMESAL 423
+N K + ++A + EM G + PD++ F L + KD +M +L
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESL 628
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 71/338 (21%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
++ V+ ++++IS Y G ++DA+ +L+R + L+ L+ + + E
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ + + L + +M + K G I A+ VFD ++ L + +NTL++ Y
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL----ILWNTLLAAYA 452
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+SG E RL M+ E + P+V T++ +I L + + DEA +F +M G++PN +
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY----------------------- 371
++TT+++G ++G + A+ + M + G+RP+ +
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI 572
Query: 372 -------------NALINGLCKVGDLKEARK----------------------------- 389
+L++ K GD+ +A K
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEA 632
Query: 390 --LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
L + GLKPD IT T ++ C GD+ A+EI
Sbjct: 633 IALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 154/326 (47%), Gaps = 49/326 (15%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ---IPLRACENLLRYMMKVKPPGPS 212
++ + ++ L+ Y +G ++A++ +RK+ ++ + + C + M V+ S
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+ I+ G L L++ +CKVG I A +VFD R VV++N +ISG
Sbjct: 297 --HAIAIVN-GMELDNILGTSLLNFYCKVGLIEYAEMVFD----RMFEKDVVTWNLIISG 349
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALING--------LCKESR---------SD 315
Y + G VE+ + +M E++ D T + L++ L KE + SD
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 316 ------------------EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
+A +FD + L+ + TL+ + G AL+ F
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLAAYAESGLSGEALRLFY 465
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M +G+ P+++T+N +I L + G + EA+ + +M + G+ P+ I++TT+M+G ++G
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 418 DMESALEIKKRMVEEGIELDAVAFTM 443
E A+ ++M E G+ +A + T+
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITV 551
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G V++ + L + K G + A VFDEIP R V++N L+ GY ++G
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGK 254
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
EE RL M + + P T S ++ +E G+ + + T+
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L++ CK G ++ A +++ D+ D+VT+N +I+G + G +++A + M
Sbjct: 315 LLNFYCKVGLIEYA----EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
LK D +T TLM + +++ E++ + E D V
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS---------GNVEEGFRLKGVM 289
C++G A + F E+ + ++ P N ++ CK+ G G+ +K +
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
E VF S+L + K D+A+ +FDE+ R N V + L+ G ++GK
Sbjct: 205 ED-----CVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKN 255
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ A++ F M QG+ P VT + ++ +G ++E ++ G++ D I T+L
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 410 MDGCCKDGDMESALEIKKRMVEEGI 434
++ CK G +E A + RM E+ +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDV 340
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 135/308 (43%), Gaps = 10/308 (3%)
Query: 126 HSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVR 185
++LL G A LF +Q +V+ ++++I + +G +D+A ++
Sbjct: 445 NTLLAAYAESGLSGEALRLFYG-MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 186 KKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIR 245
+ L + ++ M++ + F ++ E G P + V + + +
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 246 SARLVFDEIPKRKLRPTVVSFNT-LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
R + I + ++VS T L+ Y K G++ + ++ G +++ ++ +A+
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG----SKLYSELPLSNAM 619
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF-QIMLDQG 363
I+ EA L+ + GL P+ +T T ++ G ++ A++ F I+ +
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
++P L Y +++ L G+ ++A +L+ EM KPD +L+ C K E
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNKQRKTELVD 736
Query: 424 EIKKRMVE 431
+ ++++E
Sbjct: 737 YLSRKLLE 744
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 128 LLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
+L + G+ + + S L M + +V+ + L+ +Y G ++A R ++
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 188 NLQIPLRACENLLRYMM---KVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+ + +L+ + K K +E L+ + P +++++++ + K G+
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
AR VF + + + + V++N+L+S V ++ M+ I PDV +++ L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 327
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I + R +EA +F+EM G+ P + L+D G V+ A F+ M I
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
PDL +Y +++ D++ A K + G +P+ +T+ TL+ G K D+E +E
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 425 IKKRMVEEGIELDAVAFT 442
+ ++M GI+ + T
Sbjct: 448 VYEKMRLSGIKANQTILT 465
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ Y ++ P V + +L+ + + A VF+E+ +RPT ++N L+ +
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
SG VE+ + M +RIFPD+++++ +++ S + A F + G PN
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+ TLI G K V+ ++ ++ M GI+ + +++ + + A E
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
M + G+ PD+ L+ ++E A E+
Sbjct: 487 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 121 PFREAHSLLCFLVSRKG-HGSASSLFASFL-QTMPTQQSVLVFDVLIS---AYTDSGFMD 175
P ++ + ++ ++ + G + A +F+S + + +P QS + ++ L+S +Y + +
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP--QSTVTYNSLMSFETSYKEVSKIY 309
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
D +Q + ++Q + + L++ + + + + E+L+ G P +N+L+
Sbjct: 310 DQMQ------RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
F G + A+ VF + + ++ P + S+ T++S Y + ++E + ++ +
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID--GQCKDGKVDLAL 353
P++ T+ LI G K + ++ ++++M G+ N TT++D G+CK+ AL
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSAL 481
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
++ M G+ PD N L++ +L+EA++L
Sbjct: 482 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 213 WEFYLEILECGYPPKVYLFN-----VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
W EILE + F+ +L+ + K+G+ A V + K P V+S+
Sbjct: 126 WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYT 185
Query: 268 TLISGYCKSG---NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
L+ Y + G N E FR M+S P T+ ++ + + EA +F+ +
Sbjct: 186 ALMESYGRGGKCNNAEAIFRR---MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 325 C---RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+ L P+ + +I K G + A K F M+ +G+ VTYN+L++
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET-- 300
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
KE K+ ++M ++PD +++ L+ + E AL + + M++ G+
Sbjct: 301 -SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+ F LI+ Y K GN R+ V+ P+V +++AL+ + + + A +F
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG---IRPDLVTYNALINGLCK 380
M G P+ +T+ ++ + K A + F+ +LD+ ++PD Y+ +I K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G+ ++ARK+ + M +G+ +T+ +LM + + +I +M I+ D V+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 441 FTM 443
+ +
Sbjct: 324 YAL 326
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
F++L+S S ++ A +RLV++ + + L+ K +E + ++
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
G ++ F L+ G + G + A + + + ++P V FN LIS +SG V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 280 EEGFRLKGVMESER--IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ F + M++E I PD + AL+ C + + A ++ + + G+ +T
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
++ K G D A ++ M ++ + PD V ++ALI+ L EA +L + ++
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
G++ I++++LM CC D + ALE+ +++
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 139 GSASSLFASFLQTMPT--QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
G ++F F Q + + ++ F LI +G + A ++R KN++ P R
Sbjct: 516 GKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVK-PDRVV 574
Query: 197 EN-LLRYMMKVKPPGPSWEFYLEILECGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDE 253
N L+ + +++ E+ +P P LM C G + A+ V+
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
I K +R T + ++ KSG+ + + M+ + + PD FSALI+
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
DEA + + +G+ +++++L+ C AL+ ++ + +RP + T NA
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LI LC+ L +A + L+E+ GLKP+ IT++ LM + D E + ++ + +G
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Query: 434 I 434
+
Sbjct: 815 V 815
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + FN+LM DI AR V + + + + TLIS KSG V+ F +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M + + ++ TF ALI+G + + +A + + + + P+ V F LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 346 DGKVDLALKKFQIMLDQG--IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
G VD A M + I PD ++ AL+ C G ++ A+++ ++ G++
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+T ++ C K GD + A I K M E+ + D V F+
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 208 PPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
P P+ F L P +N L+ + G I+ + +++ +R L ++
Sbjct: 384 PQFPARNFELHNSNGRSPETSDAYNRLL----RDGRIKDCISLLEDLDQRDLLDMDKIYH 439
Query: 268 TLISGYCKSGN-VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE-ANHLFDEMC 325
CK V+E FR ++ + P + TF+ L++ +C S+ E A + +
Sbjct: 440 ASFFKACKKQRAVKEAFRFTKLI----LNPTMSTFNMLMS-VCASSQDIEGARGVLRLVQ 494
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
G+ + +TTLI K GKVD + F M + G+ +L T+ ALI+G + G +
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVA 554
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+A + ++ +KPD++ F L+ C + G ++ A ++ M E +D
Sbjct: 555 KAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID 606
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 123/277 (44%), Gaps = 18/277 (6%)
Query: 139 GSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP---- 192
G + F ++ L++ + +VF+ LISA SG +D A + ++ + I
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 193 -----LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSA 247
++AC N + + E Y I + G ++ + ++ K GD A
Sbjct: 611 SIGALMKACCNAGQVER-------AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFA 663
Query: 248 RLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALING 307
++ ++ ++ + P V F+ LI + ++E F + +S+ I ++S+L+
Sbjct: 664 CSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Query: 308 LCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
C +A L++++ L P T LI C+ ++ A++ + G++P+
Sbjct: 724 CCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
+TY+ L+ + D + + KLL++ G+ P+ I
Sbjct: 784 TITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F + + + +N +I G CK+G +E + + + PDV T++ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ S A L+ EM RRGLVP+ +T+ ++I G CK K+ A K +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
T+N LING CK +K+ L EM RG+ + IT+TTL+ G + GD +AL+I + M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 430 VEEGIELDAVAF 441
V G+ ++ F
Sbjct: 168 VSNGVYSSSITF 179
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+++HG CK G A +F + L+P V ++N +I + G E +L M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAE---KLYAEMI 72
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ PD T++++I+GLCK+++ +A R + + TF TLI+G CK +V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVK 123
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+ F M +GI +++TY LI+G +VGD A + EM + G+ ITF ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 411 DGCCKDGDMESALEI---KKRMVEEGIEL 436
C ++ A+ + K MV + L
Sbjct: 184 PQLCSRKELRKAVAMLLQKSSMVSNNVTL 212
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 182 RLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKV 241
+++R+ N+ + ++ + K + + +L G P V +N+++ F +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSL 61
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
G R+ +L + E+ +R L P +++N++I G CK + + + ++ TF
Sbjct: 62 G--RAEKL-YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTF 109
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
+ LING CK +R + +LF EM RRG+V N +T+TTLI G + G + AL FQ M+
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLL 391
G+ +T+ ++ LC +L++A +L
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
VM + D ++ +I+GLCK + DEA ++F + GL P+ T+ +I +
Sbjct: 4 VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFS 59
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+ A K + M+ +G+ PD +TYN++I+GLCK L +ARK+ + TF
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFN 110
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
TL++G CK ++ + + M GI + + +T
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYT 145
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 171 SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC-----GYP 225
GF+DD V +L++ Y MK E E +EC G
Sbjct: 267 GGFVDDGVVYGQLMKG---------------YFMK--------EMEKEAMECYEEAVGEN 303
Query: 226 PKVYL----FNVLMHGFCKVGDIRSARLVFDEI-----PKRKLRPTVVSFNTLISGYCKS 276
KV + +N ++ + G A +FD + P R L + +FN +++GYC
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G EE + M + PD +F+ L+N LC EA L+ EM + + P+ T+
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
L+D K+GK+D ++ M++ +RP+L YN L + L K G L +A+ + M +
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+ LK D + +M + G ++ L+I M+++
Sbjct: 484 K-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDD 518
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 19/330 (5%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP +++L + + +G+ L F+ +++ ++++ AY D + A+
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHG-FINQAGIAPNIITYNLIFQAYLDVRKPEIAL 185
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILE----CGYPPKVYLFNVL 234
+ +L PL R ++K + E +EI E G+ +++ L
Sbjct: 186 EHYKLFID---NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYL 242
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTV---VSFNTLISGYCKSGNVEEGFRL--KGVM 289
M G K D ++ E+ K KL V V + L+ GY +E + V
Sbjct: 243 MMGCVKNSDADGVLKLYQEL-KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVG 301
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR-----RGLVPNGVTFTTLIDGQC 344
E+ ++ ++ ++ L + + DEA LFD + + R L N TF +++G C
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
GK + A++ F+ M D PD +++N L+N LC L EA KL EM + +KPD+
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEY 421
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
T+ LMD C K+G ++ K MVE +
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+V+ L+ Y +A++C +N ++ + A Y+++ ++ L+
Sbjct: 274 VVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM--AYNYVLEALSENGKFDEALK 331
Query: 219 ILEC----GYPPK-----VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
+ + PP+ + FNV+++G+C G A VF ++ K P +SFN L
Sbjct: 332 LFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
++ C + + E +L G ME + + PD +T+ L++ KE + DE + M L
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
PN + L D K GK+D A F +M+ + ++ D Y ++ L + G L E K
Sbjct: 452 RPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLK 510
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKD--------GDMESALEIKKRMVEEG 433
+++EM L D + + + K+ GD+E +E K+R+ E
Sbjct: 511 IVDEM----LDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEEKERLKAEA 558
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 12/213 (5%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP--PGPSWE 214
S + ++ ++ A +++G D+A++ V+K++ P NL + + V G +E
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEH-NPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 215 FYLEIL------ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+E+ +C P FN LM+ C + A ++ E+ ++ ++P ++
Sbjct: 368 EAMEVFRQMGDFKCS--PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L+ K G ++EG M + P++ ++ L + L K + D+A FD M +
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK- 484
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
L + + ++ + G++D LK MLD
Sbjct: 485 LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
RPT+ + NT+++ + +L G + I P++ T++
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYN----------------- 169
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGL 378
+ F +D + K ++AL+ +++ +D + P + T+ L+ GL
Sbjct: 170 --------------LIFQAYLDVR----KPEIALEHYKLFIDNAPLNPSIATFRILVKGL 211
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE--GIEL 436
+L++A ++ +M +G D + ++ LM GC K+ D + L++ + + E+ G
Sbjct: 212 VSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVD 271
Query: 437 DAVAF 441
D V +
Sbjct: 272 DGVVY 276
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 147/302 (48%), Gaps = 8/302 (2%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V F +++ Y + +D+A+ ++ K +L L A LL + K K + E +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E + + P +++L+ G+ K ++ AR VF E+ P +V+++ ++ CK+
Sbjct: 227 -ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V+E + M+ P F +S L++ E+R +EA F EM R G+ + F
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+LI CK ++ + + M +G+ P+ + N ++ L + G+ EA + +M
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-I 404
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM------EEVAMQK 450
+ +PD T+T ++ C+ +ME+A ++ K M ++G+ F++ EE QK
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 451 EC 452
C
Sbjct: 465 AC 466
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP--KRKLRPTVVSFNTLISGYCKSGNVEE 281
Y V +++++ K IR +L++D I ++K V +F ++ Y ++ V+E
Sbjct: 130 YEHSVRAYHMMIESTAK---IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
VME + P++ F+ L++ LCK +A +F+ M R P+ T++ L++
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLE 245
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G K+ + A + F+ M+D G PD+VTY+ +++ LCK G + EA ++ M+ KP
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ L+ + +E A++ M G++ D F
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 346
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P ++++VL+H + + A F E+ + ++ V FN+LI +CK+ ++ +R+
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M+S+ + P+ + + ++ L + DEA +F +M + P+ T+T +I C+
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCE 423
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+++ A K ++ M +G+ P + T++ LINGLC+ ++A LL EM G++P +T
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 406 FTTL 409
F L
Sbjct: 484 FGRL 487
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+LE+ G V +FN L+ FCK +++ V E+ + + P S N ++ +
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 276 SGNVEEGFRL--KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
G +E F + K + E PD T++ +I C++ + A+ ++ M ++G+ P+
Sbjct: 390 RGEKDEAFDVFRKMIKVCE---PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSM 446
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
TF+ LI+G C++ A + M++ GIRP VT+ L L K + ++ K LNE
Sbjct: 447 HTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK-EEREDVLKFLNE 505
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+ ++ VL+ Y +++AV + + ++ + +L+ K +
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
E+ G P N+++ + G+ A VF ++ K P ++ +I +C+
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEK 424
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+E ++ M + +FP + TFS LINGLC+E + +A L +EM G+ P+GVTF
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Query: 337 TTLIDGQCKDGKVDL 351
L K+ + D+
Sbjct: 485 GRLRQLLIKEEREDV 499
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
R+ + N TF ++ + KVD A+ F +M + P+LV +N L++ LCK +++
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVR 220
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+A+++ M R PD T++ L++G K+ ++ A E+ + M++ G D V +++
Sbjct: 221 KAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ V VF+ LI A+ + M + + ++ ++ K + ++C +LR++++ +++
Sbjct: 339 KADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFD 398
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ ++++ P + +++ FC+ ++ +A V+ + K+ + P++ +F+ LI+G C
Sbjct: 399 VFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
+ ++ L M I P TF L L KE R D L ++M
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 1/272 (0%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKK-NLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+I Y +G +D AV+ V K Q + +LL + VK ++ ++
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P + +L++G+C G ++ A+ DE+ +R P + LI G +G +E
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+ M PD+ TF+ LI + K + ++ C+ GL + T+ TLI
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K GK+D A + ++ G +P Y +I G+C+ G +A ++M + P+
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ +T L+ C + G A M E G+
Sbjct: 392 RPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 4/307 (1%)
Query: 129 LCFLVSRKGHGS----ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLV 184
LCF++ + G A LF +T+ QQ+V V++ L+ A D A IR +
Sbjct: 149 LCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRM 208
Query: 185 RKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDI 244
+K L+ R L+ + EF E+ G+ P ++L+ G G +
Sbjct: 209 IRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYL 268
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSAL 304
SA+ + ++ K P + +FN LI KSG VE + + D+ T+ L
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTL 328
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
I + K + DEA L + G P + +I G C++G D A F M +
Sbjct: 329 IPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH 388
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
P+ Y LI + G +A L EM GL P F + DG G + A+
Sbjct: 389 PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMR 448
Query: 425 IKKRMVE 431
I++ V+
Sbjct: 449 IEQLEVQ 455
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 1/191 (0%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
PT + + L E +++ M+ + T +I K D+A L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 321 FDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
F+ + + G + +L+ C A + M+ +G++PD TY L+NG C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
G +KEA++ L+EM+ RG P L++G G +ESA E+ +M + G D
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 440 AFTMEEVAMQK 450
F + A+ K
Sbjct: 289 TFNILIEAISK 299
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 39/291 (13%)
Query: 178 VQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHG 237
V+ +++ +++ + +C + ++ V +F + V +N ++
Sbjct: 197 VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLA 256
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
+C+ G A + E+ K + P +V++N LI GY + G + L ME+ I D
Sbjct: 257 YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITAD 316
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF--------------------- 336
VFT++A+I+GL +A +F +M G+VPN VT
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 337 --------------TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
+L+D K GK++ A K F D D+ T+N++I G C+ G
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF----DSVKNKDVYTWNSMITGYCQAG 432
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+A +L M L+P+ IT+ T++ G K+GD A+++ +RM ++G
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ V + N L+ + K G + AR VFD + + V ++N++I+GYC++G +
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYCGKA 437
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP-NGVTFTTLID 341
+ L M+ + P++ T++ +I+G K EA LF M + G V N T+ +I
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G ++GK D AL+ F+ M P+ VT +L+ + K R++ + R L
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 402 DKITFTTLMDGCCKDGDMESALEI 425
L D K GD+E + I
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTI 581
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 40/219 (18%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
VY +N ++ G+C+ G A +F + LRP ++++NT+ISGY K+G+ E L
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 288 VMESE-RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI------ 340
ME + ++ + T++ +I G + + DEA LF +M +PN VT +L+
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 341 -----------------------------DGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
D K G ++ + F M + D++T+
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITW 593
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
N+LI G G A L N+M +G+ P++ T ++++
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 66/296 (22%)
Query: 183 LVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVG 242
L R +L +A ++L + KVK YL++LE + + G +G
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRST-----YLKLLE----------SCIDSGSIHLG 100
Query: 243 DIRSARL-VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTF 301
I AR +F E P V L+S Y K G + + ++ M ER ++FT+
Sbjct: 101 RILHARFGLFTE-------PDVFVETKLLSMYAKCGCIADARKVFDSMR-ER---NLFTW 149
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG--QCKD------------- 346
SA+I +E+R E LF M + G++P+ F ++ G C D
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 347 --------------------GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
G++D A K F+ M ++ D++ +N+++ C+ G +E
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEE 265
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
A +L+ EM G+ P +T+ L+ G + G ++A+++ ++M GI D +T
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 43/312 (13%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
RP ++++ + G A LF + Q++ ++++I+ Y +G D+A+
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ R ++ R+M P+ L +L P L M
Sbjct: 510 ELFRKMQ-------------FSRFM-------PNSVTILSLL----PACANLLGAKM--- 542
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
R + + +R L N L Y KSG++E + ME++ D+
Sbjct: 543 --------VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DI 590
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF-Q 357
T+++LI G A LF++M +G+ PN T +++I G VD K F
Sbjct: 591 ITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYS 650
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
I D I P L +A++ + L+EA + + EMN + P + + + GC G
Sbjct: 651 IANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP---IWESFLTGCRIHG 707
Query: 418 DMESALEIKKRM 429
D++ A+ + +
Sbjct: 708 DIDMAIHAAENL 719
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 10/278 (3%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP-LRACENLLRYMMKVKPPGPSWEF 215
+V +++ LI Y + G A R +R L P L++ + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ ++ G+ +Y+ N L+H + GD+ SA VFD++P++ L V++N++I+G+ +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVINGFAE 199
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+G EE L M S+ I PD FT +L++ K + M + GL N +
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
L+D + G+V+ A F M+D+ + V++ +LI GL G KEA +L M
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 396 A-RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+ GL P +ITF ++ C G ++ E +RM EE
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME-SERIFPDVFTFSALI 305
A VF +I K V +NTLI GY + GN F L M S + PD T+ LI
Sbjct: 72 AHKVFSKIEKP---INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
+ + + + R G +L+ G V A K F M ++
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK--- 185
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
DLV +N++ING + G +EA L EMN++G+KPD T +L+ C K G + +
Sbjct: 186 -DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 426 KKRMVEEGI 434
M++ G+
Sbjct: 245 HVYMIKVGL 253
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 118/247 (47%), Gaps = 9/247 (3%)
Query: 197 ENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
++L+ Y++ + P P + + P V+++N L+ G+ ++G+ SA ++ E+
Sbjct: 54 KHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRV 113
Query: 257 RKL-RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
L P ++ LI +V G + V+ ++ ++L++
Sbjct: 114 SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA 173
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
A +FD+M + LV + ++I+G ++GK + AL + M +GI+PD T +L+
Sbjct: 174 SAYKVFDKMPEKDLV----AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ K+G L +++ M GL + + L+D + G +E A K + +E ++
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA----KTLFDEMVD 285
Query: 436 LDAVAFT 442
++V++T
Sbjct: 286 KNSVSWT 292
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVG---DIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
LEI E + F++ + FC G D+ ++V + P F ++
Sbjct: 163 LEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLC 222
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
C++G V E F++ G+M I V +S L++G + +A LF++M + G PN
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
VT+T+LI G G VD A + +G+ PD+V N +I+ ++G +EARK+
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDME 420
+ R L PD+ TF +++ C G +
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKFD 369
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 8/282 (2%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQ---IPLRA-CENLLRYMMKVKPPGPSWEFY 216
FD+ +S + G D V +++V K+ + P R +LR + +++
Sbjct: 177 FDIALSHFCSRGGRGDLVG-VKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ G V ++++L+ GF + G+ + A +F+++ + P +V++ +LI G+
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G V+E F + ++SE + PD+ + +I+ + R +EA +F + +R LVP+ TF
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+++ C GK DL + I G DLVT N L N K+G A K+L+ M+
Sbjct: 356 ASILSSLCLSGKFDLVPR---ITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSY 412
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDA 438
+ D T+T + C+ G +A+++ K +++E LDA
Sbjct: 413 KDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDA 454
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 147/349 (42%), Gaps = 32/349 (9%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC 180
P RE + L R G S + + SV V+ +L+S + SG AV
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 181 IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCK 240
+ + L +L++ + + ++ ++ G P + L N+++H + +
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE-------------------- 280
+G AR VF + KRKL P +F +++S C SG +
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNL 389
Query: 281 ------------EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
++ +M + D +T++ ++ LC+ A ++ + +
Sbjct: 390 LSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEK 449
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ + +ID + GK + A+ F+ + + D+V+Y I GL + ++EA
Sbjct: 450 KHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAY 509
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
L +M G+ P++ T+ T++ G CK+ + E +I + ++EG+ELD
Sbjct: 510 SLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E Y + G+ P N++M K+ + A +F+ I R SF+ +S +
Sbjct: 129 EVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHF 184
Query: 274 CKSGNVEEGFRLKGVME---SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
C G + +K V++ E +P+ F ++ C+ EA + M G+
Sbjct: 185 CSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGIS 244
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
+ ++ L+ G + G+ A+ F M+ G P+LVTY +LI G +G + EA +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
L+++ + GL PD + ++ + G E A ++
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVM---ESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
+ TL+ GY K+G V + R+ M + PD T++ +++ D A +
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGLCKV 381
EM R G+ N +T+ L+ G CK ++D A + M D GI PD+V+YN +I+G +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE-GIELDAVA 440
D A NEM RG+ P KI++TTLM G + A + M+ + +++D +A
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 441 FTM 443
+ M
Sbjct: 597 WNM 599
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + ++ F G + AR V E+ + + +++N L+ GYCK ++ L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 286 -KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
+ + E I PDV +++ +I+G S A F+EM RG+ P +++TTL+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 345 KDGKVDLALKKF-QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
G+ LA + F ++M D ++ DL+ +N L+ G C++G +++A+++++ M G P+
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 404 ITFTTLMDGCCKDGDMESAL----EIKKR 428
T+ +L +G + AL EIK+R
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 50/294 (17%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNL----------------QIPLRACENLLRY 202
+ + ++SA+ ++G MD A Q + + + + Q+ + E+LLR
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 203 MMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT 262
M + + G P V +N+++ G + D A F+E+ R + PT
Sbjct: 513 MTE---------------DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPT 557
Query: 263 VVSFNTLISGYCKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
+S+ TL+ + SG + R+ +M R+ D+ ++ L+ G C+ ++A +
Sbjct: 558 KISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVV 617
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP-DLVTYNALINGLCK 380
M G PN T+ +L +G + Q +P D + I C
Sbjct: 618 SRMKENGFYPNVATYGSLANG-----------------VSQARKPGDALLLWKEIKERCA 660
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
V + ++ LKPD+ TL D C + + ALEI M E GI
Sbjct: 661 VKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGI 714
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 66/285 (23%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
W+ + E+ E P V +NV++ +VG V + I + ++ + + ++L++
Sbjct: 256 WKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAA 315
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRS------------------ 314
Y G++ R+ M +R LCK R
Sbjct: 316 YVGFGDLRTAERIVQAMREKR------------RDLCKVLRECNAEDLKEKEEEEAEDDE 363
Query: 315 -------DEANHLFDEMCRRGLV-------PNGV------------------TFTTLIDG 342
D DE+ G+V PN V +TTL+ G
Sbjct: 364 DAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKG 423
Query: 343 QCKDGKVDLALKKFQIMLDQGIR---PDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
K+G+V + + M Q R PD VTY +++ G + AR++L EM G+
Sbjct: 424 YMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGV 483
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEE-GIELDAVAFTM 443
++IT+ L+ G CK ++ A ++ + M E+ GIE D V++ +
Sbjct: 484 PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI--- 340
RL+ + R+ D + L K ++ A + M R G +P+ +T +
Sbjct: 141 RLRNERQLHRL--DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASL 198
Query: 341 -----DGQCKDGKVDLAL-KKFQIMLDQGI----RPDLVTYNALINGLCKVGDLKEARKL 390
DG + K+ +A+ ++ + DQ + RPD +NA++N +GD + KL
Sbjct: 199 SASGDDGPEESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKL 258
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
EM+ +PD +T+ ++ C + G E + + +R++++GI++
Sbjct: 259 FEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKV 304
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%)
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PD F+A++N +D+ LF+EM P+ +T+ +I + G+ +L +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ ++D+GI+ + T ++L+ GDL+ A +++ M +
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREK 335
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 33/310 (10%)
Query: 133 VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP 192
V + G A LF + MP ++ V ++ ++S Y +G +DDA + +KN +
Sbjct: 137 VRNRNLGKARELF----EIMP-ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN-DVS 190
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
A L Y+ K E + + + +N L+ GF K I AR FD
Sbjct: 191 WNAL--LSAYVQNSKM-----EEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+ R VVS+NT+I+GY +SG ++E +L E DVFT++A+++G +
Sbjct: 244 SMNVRD----VVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNR 295
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+EA LFD+M R N V++ ++ G + ++++A + F +M + + T+N
Sbjct: 296 MVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWN 347
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+I G + G + EA+ L ++M R D +++ ++ G + G AL + +M E
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 433 GIELDAVAFT 442
G L+ +F+
Sbjct: 404 GGRLNRSSFS 413
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 40/226 (17%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N ++ G+ + G+ AR +FDE+P+R L VS+N +I GY ++ N+ + L +M
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELFEIM- 152
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
ER DV +++ +++G + D+A +FD M + N V++ L+ ++ K++
Sbjct: 153 PER---DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKME 205
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A F+ + LV++N L+ G K + EAR+ + MN R D +++ T++
Sbjct: 206 EACMLFKSRENWA----LVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTII 257
Query: 411 DGCCKDGDMESALE--------------------IKKRMVEEGIEL 436
G + G ++ A + I+ RMVEE EL
Sbjct: 258 TGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 16/262 (6%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
Q V + ++S Y + +++A + + ++N ++ A M+ G E
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERN-EVSWNA-------MLAGYVQGERMEM 330
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
E+ + V +N ++ G+ + G I A+ +FD++PKR P VS+ +I+GY +
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD--P--VSWAAMIAGYSQ 386
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
SG+ E RL ME E + +FS+ ++ + L + + G
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
L+ CK G ++ A F+ M + D+V++N +I G + G + A + M
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 396 ARGLKPDKITFTTLMDGCCKDG 417
GLKPD T ++ C G
Sbjct: 503 REGLKPDDATMVAVLSACSHTG 524
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 56/206 (27%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+L+CG + +NV + + + G A VF +P R + VS+N +ISGY ++G
Sbjct: 56 LLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGE 110
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E A LFDEM R L V++
Sbjct: 111 FEL-----------------------------------ARKLFDEMPERDL----VSWNV 131
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G ++ + A + F+IM ++ D+ ++N +++G + G + +AR + + M
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRM---- 183
Query: 399 LKPDK--ITFTTLMDGCCKDGDMESA 422
P+K +++ L+ ++ ME A
Sbjct: 184 --PEKNDVSWNALLSAYVQNSKMEEA 207
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 152/371 (40%), Gaps = 73/371 (19%)
Query: 142 SSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLR 201
SS F S LQ + T V +V++ + SG D +Q +++ +I + + ++
Sbjct: 82 SSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK 140
Query: 202 YMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRP 261
++ K + E Y I + VY+ N ++ K G + S +FD++ + L+P
Sbjct: 141 FV-GAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKP 199
Query: 262 TVVSFNTLISGYCK------------------------------------SGNVEEGFRL 285
VV++NTL++G K +G EE
Sbjct: 200 DVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENF 259
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI----- 340
M+ E P+++ +S+L+N + +A+ L EM GLVPN V TTL+
Sbjct: 260 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 319
Query: 341 ------------------------------DGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
DG K GK++ A F M +G+R D
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
+ +I+ LC+ KEA++L + K D + T++ C+ G+MES + + K+M
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 431 EEGIELDAVAF 441
E+ + D F
Sbjct: 440 EQAVSPDYNTF 450
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
F ++ A ++ IP + V N+++S K+G ++ +L M+ + + PD
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 298 VFTFSALINGLCK-ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
V T++ L+ G K ++ +A L E+ G+ + V + T++ +G+ + A
Sbjct: 201 VVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFI 260
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
Q M +G P++ Y++L+N GD K+A +L+ EM + GL P+K+ TTL+ K
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 417 GDMESALEIKKRMVEEGIELDAVAFTM 443
G + + E+ + G + + + M
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCM 347
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P +Y ++ L++ + GD + A + E+ L P V TL+ Y K G +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L +ES + + L++GL K + +EA +FD+M +G+ +G + +I
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+ + A + + + DLV N ++ C+ G+++ +++ +M+ + + PD
Sbjct: 387 LCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPD 446
Query: 403 KITFTTLM 410
TF L+
Sbjct: 447 YNTFHILI 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 147 SFLQTMPTQQ---SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYM 203
+F+Q M + ++ + L+++Y+ G A + + ++ L LL+
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 204 MKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTV 263
+K S E E+ GY + +LM G K G + AR +FD++ + +R
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDG 377
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
+ + +IS C+S +E L E+ D+ + ++ C+ + + +
Sbjct: 378 YANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD---QGIRPDLVTYNALINGLCK 380
M + + P+ TF LI K+ L L +Q LD +G R + ++LI L K
Sbjct: 438 MDEQAVSPDYNTFHILIKYFIKE---KLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGK 494
Query: 381 VGDLKEARKLLN 392
+ EA + N
Sbjct: 495 IRAQAEAFSVYN 506
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V F +MH + G+I + R VF+ + L+P +VS+N L+ Y G +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G ++ I PDV +++ L+N + + +A +F M + PN VT+ LID
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+G + A++ F+ M GI+P++V+ L+ + +L+ +RG+ +
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + + ++E A+ + + M ++ ++ D+V FT+
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 129/284 (45%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ L+ AY G A+ + +++ + + + LL + + PG + E +
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
L + + P V +N L+ + G + A +F ++ + ++P VVS TL++ +S
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ +S I + +++ I + ++A L+ M ++ + + VTF
Sbjct: 342 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 401
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T LI G C+ K A+ + M D I Y++++ K G + EA + N+M
Sbjct: 402 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 461
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G +PD I +T+++ A E+ M GIE D++A
Sbjct: 462 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 2/324 (0%)
Query: 121 PFREAHSLLCFLVSRKGHGS-ASSLFASFLQTMPT-QQSVLVFDVLISAYTDSGFMDDAV 178
P +++ + +S+ G S A LF S + + V+ F ++ Y+ G +++
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ + L+ + + L+ G + +I + G P V + L++ +
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ A+ VF + K + +P VV++N LI Y +G + E + ME + I P+V
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+ L+ + + + + RG+ N + + I +++ A+ +Q
Sbjct: 329 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M + ++ D VT+ LI+G C++ EA L EM + K +++++ K G
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+ A I +M G E D +A+T
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYT 472
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
++ Y + ++N+++ + + AR +F E+ K +P +++ LI+ + ++G
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
L M I P T++ LIN EA + +M G+ P+ VT +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ + AL F++M +RPD T+N +I L K+G +A L N M +
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 400 --KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+PD +TFT++M G++E+ + + MV EG++ + V++
Sbjct: 183 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E+ + P ++ L++ + G R A + D++ + + P+ ++N LI+
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
SGN E + M + PD+ T + +++ + +A F+ M + P+
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGI--RPDLVTYNALINGLCKVGDLKEARKLLN 392
TF +I K G+ AL F M ++ RPD+VT+ ++++ G+++ R +
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 212
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M A GLKP+ +++ LM G +AL + + + GI D V++T
Sbjct: 213 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ ++ LI AY +GF+ +AV+ R + + ++ + + LL + K
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
G +N + + ++ A ++ + K+K++ V+F LISG C+
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
E ME I +S+++ K+ + EA +F++M G P+ + +
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+++ K A + F M GI PD + +AL+ K G L++ M
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 531
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ + F + C + + A+++ + M
Sbjct: 532 KEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 564
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
++ +I + + D+A LF EM + P+ T+ LI+ + G+ A+ ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
I P TYN LIN G+ +EA ++ +M G+ PD +T ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 421 SALEIKKRMVEEGIELDAVAFTM 443
AL + M + D F +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNI 156
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPK-------VYLF 231
+ + +R++ +I L C +L+ M K K + E Y ++L+ G P V F
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N+L+ K G R + +++ + L+P +N ++ K+ ++ M
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL---IDGQCKDGK 348
P V ++ AL++ L K DEA +++ M + G+ PN +TT+ + GQ K
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+D LK+ M +GI P +VT+NA+I+G + G A + + M + ++P++IT+
Sbjct: 547 LDTLLKE---MASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIEL-----DAVAFTME 444
L++ D A E+ + EG++L DAV + E
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAE 644
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 7/243 (2%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++L+SA + G V+ + + K L+ R +L K + + + ++
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ G P V + L+ K A V++ + K + P + ++ T+ S
Sbjct: 486 DNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFN 545
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
L M S+ I P V TF+A+I+G + S A F M + PN +T+ LI
Sbjct: 546 LLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+ D K LA + ++G++ Y+A++ E ++N G +
Sbjct: 606 EALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS-------AETYGATIDLNLLGPR 658
Query: 401 PDK 403
PDK
Sbjct: 659 PDK 661
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 352 ALKKFQIMLDQGIRPDLVTY-------NALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
AL+ ++ +LD+G P+ ++Y N L++ K G + +LLN+M +GLKP +
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQK 450
+ ++ C K + +A++I K MV+ G + +++ A++K
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 8/333 (2%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFD---VLISAYTDS 171
W+ R ++ + G G S M Q ++ D ++I Y +
Sbjct: 667 WVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRT 726
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMM---KVKPPGPSWEFYLEILECGYPPKV 228
G + A++ + ++ L IP + L ++ K + + + E++ G+ P
Sbjct: 727 GLTNIAIRTFKEMKDMGL-IPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDR 785
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
L + C+VG+ + A+ D + K P V+++ I C+ G +EE
Sbjct: 786 ELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELAS 844
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
E ER D +T+ ++++GL + +A + M G P +T+LI K+ +
Sbjct: 845 FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
++ L+ Q M + P +VTY A+I G +G ++EA M RG PD T++
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
++ C+ E AL++ M+++GI + F
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 142/324 (43%), Gaps = 4/324 (1%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQ---QSVLVFDVLISAYTDS 171
W+ + F + ++S G + + M + + + +LIS Y +
Sbjct: 178 WVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKA 237
Query: 172 GFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLF 231
+ + +RK ++ A ++R + + EFY E++E G + +
Sbjct: 238 KKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY 297
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
+L+ K + + + D++ + +F L+ +C SG ++E L +++
Sbjct: 298 KMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKN 357
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
+ + D F L+ GLC+ +R +A + D M RR L + V + +I G + V
Sbjct: 358 KEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSK 416
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
AL++F+++ G P + TY ++ L K+ ++ L NEM G++PD + T ++
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVA 476
Query: 412 GCCKDGDMESALEIKKRMVEEGIE 435
G + A ++ M E+GI+
Sbjct: 477 GHLGQNRVAEAWKVFSSMEEKGIK 500
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
F +L+ G C+ + A + D + +RKL + V + +ISGY + +V + V++
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIK 425
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
P V T++ ++ L K + ++ +LF+EM G+ P+ V T ++ G +V
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A K F M ++GI+P +Y+ + LC+ E K+ N+M+A + F+ ++
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Query: 411 DGCCKDGDMES---ALEIKKR 428
K+G+ E EI+KR
Sbjct: 546 SSMEKNGEKEKIHLIKEIQKR 566
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G P V+++ L+ F K + ++ P+VV++ +I GY G VE
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E + ME PD T+S IN LC+ +S++A L EM +G+ P+ + F T+
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Query: 341 DGQCKDGKVDLA 352
G ++GK DLA
Sbjct: 1002 YGLNREGKHDLA 1013
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
Y + ++HG + GD++ A + + + +P V + +LI + K +E+
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK 914
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
ME E P V T++A+I G + +EA + F M RG P+ T++ I+ C+ K
Sbjct: 915 MEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+ ALK MLD+GI P + + + GL + G AR L + +A
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSA 1022
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 109/235 (46%), Gaps = 8/235 (3%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F++L+ + M DA++ + +++++ L ++ ++ + E + I
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
+ G PP+V + +M K+ +F+E+ + + P V+ +++G+ V
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E +++ ME + I P ++S + LC+ SR DE +F++M +V F+ +I
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
K+G +K +I L + I+ +Y +NG K + + +L+++ N
Sbjct: 546 SSMEKNG------EKEKIHLIKEIQKRSNSYCDELNGSGK-AEFSQEEELVDDYN 593
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
+NT++S ++ N++ L ME D+ T++ LI+ K + + +F++M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLK 385
+ G + + +I C G+ DLAL+ ++ M+++GI L TY L++ + K +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + ++M + F L+ C G ++ ALE+ + + + + LDA F +
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF------YLEILECGYPPKVYLFNV 233
C ++RK + Q P C NLL + G +++ Y+++LE Y P + +
Sbjct: 164 CEWILRKSSFQ-PDVICFNLL-----IDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 217
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS---FNTLISGYCK-SGNVEEGFRLKGVM 289
L+ +C G I A +V E+ + P + +N I G K GN EE + M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ +R P T++ +IN K S+S + L+ EM PN T+T L++ ++G
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ A + F+ + + G+ PD+ YNAL+ + G A ++ + M G +PD+ ++ +
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 410 MDGCCKDG---DMESALEIKKRM 429
+D + G D E+ E KR+
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRL 420
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 143/332 (43%), Gaps = 46/332 (13%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGS------ASSLFASFLQT--MPTQQSVLVFDVLIS 166
W+ + F+ ++CF + +G A SL+ L++ +PT+ + + +LI
Sbjct: 166 WILRKSSFQP--DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT---YALLIK 220
Query: 167 AYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPP 226
AY +G ++ A + LV +N + +
Sbjct: 221 AYCMAGLIERAE--VVLVEMQNHHVSPKTI------------------------------ 248
Query: 227 KVYLFNVLMHGFCK-VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
V ++N + G K G+ A VF + + + +PT ++N +I+ Y K+ ++L
Sbjct: 249 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 308
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M S + P++ T++AL+N +E ++A +F+++ GL P+ + L++ +
Sbjct: 309 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 368
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G A + F +M G PD +YN +++ + G +A + EM G+ P +
Sbjct: 369 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 428
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
L+ K D+ I K M E G+E D
Sbjct: 429 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P V FN+L+ + + + A ++ ++ + + PT ++ LI YC +G +E
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 232
Query: 284 RLKGVMESERIFPD---VFTFSALINGLCK-ESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+ M++ + P V ++A I GL K + ++EA +F M R P T+ +
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ K K ++ K + M +P++ TY AL+N + G ++A ++ ++ GL
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+PD + LM+ + G A EI M G E D ++ +
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 121/291 (41%), Gaps = 1/291 (0%)
Query: 153 PTQQSVLVFDVLISAYTD-SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
P V V++ I G ++A+ + +++ + ++ K
Sbjct: 245 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 304
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
SW+ Y E+ P + + L++ F + G A +F+++ + L P V +N L+
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
Y ++G + +M+ PD +++ +++ + +A +F+EM R G+ P
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ L+ K V + M + G+ PD N+++N ++G + K+L
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
EM D T+ L++ K G +E E+ + E+ D V +T
Sbjct: 485 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 135/314 (42%), Gaps = 10/314 (3%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASF-----LQTMPTQQSVLVFDVLISAYTDSGFMD 175
P E ++L+ L +G AS + S+ +++ + ++ + L++A+ G +
Sbjct: 284 PTTETYNLMINL-----YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 338
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + +++ L+ + L+ + P + E + + G P +N+++
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 398
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+ + G A VF+E+ + + PT+ S L+S Y K+ +V + + M +
Sbjct: 399 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 458
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PD F ++++N + + + + EM + T+ LI+ K G ++ +
Sbjct: 459 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 518
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F + ++ RPD+VT+ + I + + ++ EM G PD T L+ C
Sbjct: 519 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 578
Query: 416 DGDMESALEIKKRM 429
+ +E + + M
Sbjct: 579 EEQVEQVTSVLRTM 592
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 2/248 (0%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL-RYMMKVK 207
LQ + V V++ L+ +Y+ +G+ A + L++ + P RA N++ +
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-PDRASYNIMVDAYGRAG 405
Query: 208 PPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ + E+ G P + +L+ + K D+ + E+ + + P N
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
++++ Y + G + ++ ME+ D+ T++ LIN K + LF E+ +
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
P+ VT+T+ I + L+ F+ M+D G PD T L++ +++
Sbjct: 526 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585
Query: 388 RKLLNEMN 395
+L M+
Sbjct: 586 TSVLRTMH 593
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
+ ++ ++ LI+ Y G + A+ +L+ + ++ L+ + EF
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
Y + E G + L N LM F K GDI AR +FD + KR T+VS+ T+ISGY +
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYAR 335
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G ++ +L ME + DV ++A+I G + R +A LF EM P+ +T
Sbjct: 336 CGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+ + G +D+ + + + + ++ +L++ K G++ EA + + +
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
R + +T+T ++ G GD +A+ M++ GI D + F
Sbjct: 452 TR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
++ N +H F GD+ +AR VFDE P R L VS+N LI+GY K G E+ + +
Sbjct: 192 HVHNASIHMFASCGDMENARKVFDESPVRDL----VSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 289 MESERIFPDVFTFSALI---------------------NGL--------------CKESR 313
MESE + PD T L+ NGL K
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 314 SDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
EA +FD + +R +V ++TT+I G + G +D++ K F M ++ D+V +NA
Sbjct: 308 IHEARRIFDNLEKRTIV----SWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNA 359
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+I G + ++A L EM KPD+IT + C + G ++ + I + + +
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 434 IELDAVAFTMEEVAMQKEC 452
+ L+ VA V M +C
Sbjct: 420 LSLN-VALGTSLVDMYAKC 437
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRL------KGVMESERIFPDVFTFSALINGLCKESRS 314
P + S+N I G+ +S N +E F L G ES PD FT+ L +C + R
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESR---PDHFTYPVLFK-VCADLRL 171
Query: 315 DEANHLFDEMC---RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
H+ R LV + + + C D ++ + + D+ DLV++
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGD------MENARKVFDESPVRDLVSW 225
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
N LING K+G+ ++A + M + G+KPD +T L+ C GD+ E + + E
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 432 EGIEL 436
G+ +
Sbjct: 286 NGLRM 290
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V F +MH + G+I + R VF+ + L+P +VS+N L+ Y G +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G ++ I PDV +++ L+N + + +A +F M + PN VT+ LID
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+G + A++ F+ M GI+P++V+ L+ + +L+ +RG+ +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+ + + ++E A+ + + M ++ ++ D+V FT+
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 129/284 (45%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++ ++ L+ AY G A+ + +++ + + + LL + + PG + E +
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
L + + P V +N L+ + G + A +F ++ + ++P VVS TL++ +S
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ +S I + +++ I + ++A L+ M ++ + + VTF
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T LI G C+ K A+ + M D I Y++++ K G + EA + N+M
Sbjct: 534 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 593
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G +PD I +T+++ A E+ M GIE D++A
Sbjct: 594 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 2/324 (0%)
Query: 121 PFREAHSLLCFLVSRKGHGS-ASSLFASFLQTMPT-QQSVLVFDVLISAYTDSGFMDDAV 178
P +++ + +S+ G S A LF S + + V+ F ++ Y+ G +++
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGF 238
+ + L+ + + L+ G + +I + G P V + L++ +
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
+ A+ VF + K + +P VV++N LI Y +G + E + ME + I P+V
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
+ L+ + + + + RG+ N + + I +++ A+ +Q
Sbjct: 461 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
M + ++ D VT+ LI+G C++ EA L EM + K +++++ K G
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 419 MESALEIKKRMVEEGIELDAVAFT 442
+ A I +M G E D +A+T
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYT 604
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
++ Y + ++N+++ + + AR +F E+ K +P +++ LI+ + ++G
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
L M I P T++ LIN EA + +M G+ P+ VT +
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 254
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ + AL F++M +RPD T+N +I L K+G +A L N M +
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 314
Query: 400 --KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+PD +TFT++M G++E+ + + MV EG++ + V++
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+V+ ++ LI AY +GF+ +AV+ R + + ++ + + LL + K
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
G +N + + ++ A ++ + K+K++ V+F LISG C+
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
E ME I +S+++ K+ + EA +F++M G P+ + +
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+++ K A + F M GI PD + +AL+ K G L++ M
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ + F + C + + A+++ + M
Sbjct: 664 KEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 696
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
++ +I + + D+A LF EM + P+ T+ LI+ + G+ A+ ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
I P TYN LIN G+ +EA ++ +M G+ PD +T ++
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 421 SALEIKKRMVEEGIELDAVAFTM 443
AL + M + D F +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNI 288
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 3/236 (1%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
+LR K+ G E++ ++ G ++ +++ M CK G A ++ E+ R+
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
++ VV++NT+I S VE G R+ M P+V T + +I LC++ R +A
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+ DEM +RG P+ +T+ L K ++ L F M+ G+RP + TY L+
Sbjct: 315 RMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKF 371
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ G L+ + M G PD + ++D + G ++ A E ++ M+E G+
Sbjct: 372 ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N ++ G+ K G + M++E + D+F++S ++ +CK + +A L+ EM
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
R + + V + T+I V+ ++ F+ M ++G P++ T+N +I LC+ G +++
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
A ++L+EM RG +PD IT+ L K ++ L + RM+ G+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGV 357
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
+ N+++ G+ K+G + + ++ + + S++ + CKSG + +L M
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+S R+ DV ++ +I + + +F EM RG PN T T+I C+DG++
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
A + M +G +PD +TY L + L K E L M G++P T+ L
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVML 367
Query: 410 MDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
M + G ++ L + K M E G D+ A+
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P V+F + Y + V+E ++ + D +F L++ LC+ EA
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALCEHKHVVEA--- 170
Query: 321 FDEMC-RRGLVPNGVTFTT------LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNA 373
+E+C + ++ NG + + ++ G K G + ++ M +G+ DL +Y+
Sbjct: 171 -EELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSI 229
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
++ +CK G +A KL EM +R +K D + + T++ +E + + + M E G
Sbjct: 230 YMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERG 289
Query: 434 IE 435
E
Sbjct: 290 CE 291
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 180 CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF------YLEILECGYPPKVYLFNV 233
C ++RK + Q P C NLL + G +++ Y+++LE Y P + +
Sbjct: 142 CEWILRKSSFQ-PDVICFNLL-----IDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 195
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVS---FNTLISGYCK-SGNVEEGFRLKGVM 289
L+ +C G I A +V E+ + P + +N I G K GN EE + M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ +R P T++ +IN K S+S + L+ EM PN T+T L++ ++G
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
+ A + F+ + + G+ PD+ YNAL+ + G A ++ + M G +PD+ ++ +
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 410 MDGCCKDG---DMESALEIKKRM 429
+D + G D E+ E KR+
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRL 398
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 143/332 (43%), Gaps = 46/332 (13%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGS------ASSLFASFLQT--MPTQQSVLVFDVLIS 166
W+ + F+ ++CF + +G A SL+ L++ +PT+ + + +LI
Sbjct: 144 WILRKSSFQP--DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT---YALLIK 198
Query: 167 AYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPP 226
AY +G ++ A + LV +N + +
Sbjct: 199 AYCMAGLIERAE--VVLVEMQNHHVSPKTI------------------------------ 226
Query: 227 KVYLFNVLMHGFCK-VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
V ++N + G K G+ A VF + + + +PT ++N +I+ Y K+ ++L
Sbjct: 227 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 286
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M S + P++ T++AL+N +E ++A +F+++ GL P+ + L++ +
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G A + F +M G PD +YN +++ + G +A + EM G+ P +
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
L+ K D+ I K M E G+E D
Sbjct: 407 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
+ P V FN+L+ + + + A ++ ++ + + PT ++ LI YC +G +E
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 284 RLKGVMESERIFPD---VFTFSALINGLCK-ESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+ M++ + P V ++A I GL K + ++EA +F M R P T+ +
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I+ K K ++ K + M +P++ TY AL+N + G ++A ++ ++ GL
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+PD + LM+ + G A EI M G E D ++ +
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 121/291 (41%), Gaps = 1/291 (0%)
Query: 153 PTQQSVLVFDVLISAYTD-SGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
P V V++ I G ++A+ + +++ + ++ K
Sbjct: 223 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 282
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
SW+ Y E+ P + + L++ F + G A +F+++ + L P V +N L+
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
Y ++G + +M+ PD +++ +++ + +A +F+EM R G+ P
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ L+ K V + M + G+ PD N+++N ++G + K+L
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
EM D T+ L++ K G +E E+ + E+ D V +T
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 135/314 (42%), Gaps = 10/314 (3%)
Query: 121 PFREAHSLLCFLVSRKGHGSASSLFASF-----LQTMPTQQSVLVFDVLISAYTDSGFMD 175
P E ++L+ L +G AS + S+ +++ + ++ + L++A+ G +
Sbjct: 262 PTTETYNLMINL-----YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 316
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A + +++ L+ + L+ + P + E + + G P +N+++
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 376
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+ + G A VF+E+ + + PT+ S L+S Y K+ +V + + M +
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 436
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
PD F ++++N + + + + EM + T+ LI+ K G ++ +
Sbjct: 437 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F + ++ RPD+VT+ + I + + ++ EM G PD T L+ C
Sbjct: 497 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 556
Query: 416 DGDMESALEIKKRM 429
+ +E + + M
Sbjct: 557 EEQVEQVTSVLRTM 570
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 2/248 (0%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL-RYMMKVK 207
LQ + V V++ L+ +Y+ +G+ A + L++ + P RA N++ +
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-PDRASYNIMVDAYGRAG 383
Query: 208 PPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ + E+ G P + +L+ + K D+ + E+ + + P N
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
++++ Y + G + ++ ME+ D+ T++ LIN K + LF E+ +
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
P+ VT+T+ I + L+ F+ M+D G PD T L++ +++
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Query: 388 RKLLNEMN 395
+L M+
Sbjct: 564 TSVLRTMH 571
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+L+ G+ +++ V + C+ GD++ A + E+ + + P +FN LI G+ + G
Sbjct: 329 EMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG 388
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E+G VM + + P F+ ++ + K + AN + + +G VP+ T++
Sbjct: 389 WEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYS 448
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LI G + +D ALK F M + + P + +LI GLC G ++ K L M R
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
++P+ + L+ K GD +A + M+
Sbjct: 509 LIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
++++++ K GD+ SAR VFDE+ +R + + C+ G+V+E RL ME
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+ P TF+ LI G + ++ + M RGL+P+ F ++ K V+
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A + +D+G PD TY+ LI G + D+ +A KL EM R + P F +L+
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLI 486
Query: 411 DGCCKDGDMESALE----IKKRMVE 431
G C G +E+ + +KKR++E
Sbjct: 487 VGLCTCGKVEAGEKYLKIMKKRLIE 511
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 9/297 (3%)
Query: 142 SSLFASFLQTMPTQQSV-LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
S L S L T S LVFD+L+ Y +++ + + + + L+
Sbjct: 147 SDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLI 206
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVY----LFNVLMHGFCKVGDIRSARLVFDEIPK 256
Y K K W Y EC ++Y +++ CK G ++ + D I
Sbjct: 207 HYSSKSKIDDLVWRIY----ECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
++ P+V+ +L+ + +EE L + + + D +S ++ KE
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS 322
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A +FDEM +RG N +T + C+ G V A + M + G+ P T+N LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G + G ++ + M RGL P F ++ K ++ A EI + +++G
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKG 439
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMH--GFCKVGDIRSARLVFDEIPK 256
L++ K++ ++ + + +CG+ V N L+H K+ D+ +++
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDL--VWRIYECAID 227
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
+++ P ++ +I CK G ++E L + +R P V ++L+ + +E R +E
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
+ L + + +V + + ++ ++ + K+G + A K F ML +G + Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL 436
C+ GD+KEA +LL+EM G+ P TF L+ G + G E LE + MV G+
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 437 DAVAFT 442
AF
Sbjct: 408 SCSAFN 413
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%)
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
+F +C G + +T TLI K DL + ++ +D+ I P+ +T +I LC
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
K G LKE LL+ + + P I T+L+ ++ +E ++ + KR++ + + +D +
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTI 305
Query: 440 AFTMEEVAMQKE 451
+++ A KE
Sbjct: 306 GYSIVVYAKAKE 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 262 TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
T + F+ L+ Y K +E GF + + V T + LI+ K D ++
Sbjct: 163 TPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIY 222
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ--GIR--PDLVTYNALING 377
+ + + PN +T +I CK+G+ LK+ +LD+ G R P ++ +L+
Sbjct: 223 ECAIDKRIYPNEITIRIMIQVLCKEGR----LKEVVDLLDRICGKRCLPSVIVNTSLVFR 278
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+ + ++E+ LL + + + D I ++ ++ K+GD+ SA ++ M++ G +
Sbjct: 279 VLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSAN 338
Query: 438 AVAFTM 443
+ +T+
Sbjct: 339 SFVYTV 344
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 150/312 (48%), Gaps = 16/312 (5%)
Query: 131 FLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ 190
F R+ HG ++ + + +V + + LI Y+ +G ++ + + ++ +NL
Sbjct: 105 FAEGRQIHG--------YVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS 156
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV 250
+ ++L K+ + E+ CG P + +N L+ G+ G + A V
Sbjct: 157 ----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
+ L+P+ S ++L+ + G+++ G + G + +++ DV+ + LI+ K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
A +FD M + N V + +L+ G + A M +GI+PD +T
Sbjct: 273 TGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
+N+L +G +G ++A ++ +M +G+ P+ +++T + GC K+G+ +AL++ +M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 431 EEGIELDAVAFT 442
EEG+ +A +
Sbjct: 389 EEGVGPNAATMS 400
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 10/271 (3%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP---SWE 214
++ ++ L+S Y G DA+ ++ ++ L+ + +LL+ V PG
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQ---AVAEPGHLKLGKA 246
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ IL VY+ L+ + K G + AR+VFD + + +V++N+L+SG
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLS 302
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+ +++ L ME E I PD T+++L +G + ++A + +M +G+ PN V
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
++T + G K+G ALK F M ++G+ P+ T + L+ L + L +++
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ L D T L+D K GD++SA+EI
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 10/303 (3%)
Query: 116 LATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMD 175
+A P + S L V+ GH ++ V V LI Y +G++
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
A ++ KN+ + + + L Y +K + + + G P +N L
Sbjct: 278 YARMVFDMMDAKNI-VAWNSLVSGLSYACLLKDAEA---LMIRMEKEGIKPDAITWNSLA 333
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
G+ +G A V ++ ++ + P VVS+ + SG K+GN ++ M+ E +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P+ T S L+ L S + R+ L+ + T L+D K G + A++
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 356 FQIMLDQGIR-PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
F GI+ L ++N ++ G G +E + M G++PD ITFT+++ C
Sbjct: 454 FW-----GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 415 KDG 417
G
Sbjct: 509 NSG 511
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
Y+ L+ + K GD++SA +F I + L S+N ++ GY G EEG
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 288 VMESERIFPDVFTFSALINGLCKESR-SDEANHLFDEM-CRRGLVPNGVTFTTLIDGQCK 345
VM + PD TF+++++ +CK S E FD M R G++P + ++D +
Sbjct: 487 VMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
G +D A Q M ++PD + A ++ CK+
Sbjct: 546 SGYLDEAWDFIQTM---SLKPDATIWGAFLSS-CKI 577
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 19/209 (9%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P+V L+ CKVG I AR +FD +P+R VV++ +I+GY K G++ E L
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
++S + +V T++A+++G + + A LF EM R N V++ T+IDG +
Sbjct: 100 FDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQ 152
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G++D AL+ F M ++ I V++N+++ L + G + EA L M R D ++
Sbjct: 153 SGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVS 204
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+T ++DG K+G ++ A + M E I
Sbjct: 205 WTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 113/208 (54%), Gaps = 24/208 (11%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V +N ++ G+ + G I A +FDE+P+R +VS+N+++ + G ++E L
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M DV +++A+++GL K + DEA LFD M R N +++ +I G ++
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNN 247
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK--IT 405
++D A + FQ+M ++ D ++N +I G + ++ +A L + M P+K I+
Sbjct: 248 RIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRM------PEKNVIS 297
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEG 433
+TT++ G ++ + E AL + +M+ +G
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 100/391 (25%)
Query: 122 FREAHSLLCFLVSRKGHGSASSLFASFL------------QTMPTQQSVLVFDVLISAYT 169
REA L + SRK + +++ + +L Q MP +++V+ ++ +I Y
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP-ERNVVSWNTMIDGYA 151
Query: 170 DSGFMDDAVQCIRLVRKKNLQIPLRACENLLRY--MMKVKPPGPSWEFYLEILECGYPPK 227
SG +D A++ ++P R N++ + M+K + + + E
Sbjct: 152 QSGRIDKALELFD-------EMPER---NIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V + ++ G K G + AR +FD +P+R ++S+N +I+GY ++ ++E +L
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 288 VMESERIFP----------------------------DVFTFSALINGLCKESRSDEANH 319
VM ER F +V +++ +I G + ++EA +
Sbjct: 258 VM-PERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 320 LFDEMCRRGLV-PNGVTFTT----------LIDGQ------------------------- 343
+F +M R G V PN T+ + L++GQ
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 344 CKDGKVDLALKKFQIMLDQGI--RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
K G++ A K M D G+ + DL+++N++I G KEA ++ N+M G KP
Sbjct: 377 SKSGELIAARK----MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
+T+ L+ C G +E +E K +V +
Sbjct: 433 SAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 2/300 (0%)
Query: 143 SLFASFLQTMPTQQ--SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLL 200
SLF +Q + S ++ +I + ++ A C + ++ +I + NL+
Sbjct: 226 SLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLM 285
Query: 201 RYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR 260
+ P ++E Y + + + +++ K G + +A +F ++ +RKLR
Sbjct: 286 MLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR 345
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P+ F++L+ K+G ++ ++ M+ P F +LI+ K + D A L
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+DEM + G PN +T +I+ K GK+++A+ F+ M G P TY+ L+
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G + A K+ N M GL+P ++ +L+ ++ A +I M G +D A
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA 525
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 4/296 (1%)
Query: 150 QTMPTQQSVL---VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKV 206
++M S+L ++++I + SG +D A + + ++++ L+ +L+ M K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 207 KPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
S + Y+E+ G+ P +F L+ + K G + +A ++DE+ K RP +
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
+I + KSG +E + ME P T+S L+ + D A +++ M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
GL P ++ +L+ VD+A K M G D+ + L+ + K +
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDL 540
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
A K L M + G+K + L + C K+G +SA + + +V ++D V +T
Sbjct: 541 ALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYT 596
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT---LISGYCKSGNVE 280
Y P + VL G + D + +F+E+ + +SFN +I K+ +E
Sbjct: 201 YLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLE 260
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
F + D T++ L+ + +A +++ M + + +G T+ +I
Sbjct: 261 VAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELII 320
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
K G++D A K FQ M ++ +RP +++L++ + K G L + K+ EM G +
Sbjct: 321 PSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR 380
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
P F +L+D K G +++AL + M + G + +TM
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
++ G+ +Y+ N L+H + GD+ SA VFD++P++ L V++N++I+G+ ++G
Sbjct: 14 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVINGFAENGK 69
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
EE L M S+ I PD FT +L++ K + M + GL N +
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA-R 397
L+D + G+V+ A F M+D+ + V++ +LI GL G KEA +L M +
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
GL P +ITF ++ C G ++ E +RM EE
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ V + L+ Y + G + A + + +K+L A +++ + P + Y
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV----AWNSVINGFAENGKPEEALALYT 78
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ G P + L+ K+G + + V + K L + S N L+ Y + G
Sbjct: 79 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 138
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-CRRGLVPNGVTF 336
VEE + E + + ++++LI GL EA LF M GL+P +TF
Sbjct: 139 RVEEA----KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 194
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
++ G V + F+ M ++ I P + + +++ L + G +K+A + + M
Sbjct: 195 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 254
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESA 422
++P+ + + TL+ C GD + A
Sbjct: 255 ---MQPNVVIWRTLLGACTVHGDSDLA 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITF 406
G V A K F M ++ DLV +N++ING + G +EA L EMN++G+KPD T
Sbjct: 37 GDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGI 434
+L+ C K G + + M++ G+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGL 120
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 16/301 (5%)
Query: 152 MPTQ---QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
MP+Q +SV + LI+AY +G + +++ L R KN +I ++L Y +
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLEL--LDRMKNEKI----SPSILTYNTVINA 220
Query: 209 ---PGPSWE----FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRP 261
G WE + E+ G P + +N L+ G A +VF + + P
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 262 TVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF 321
+ +++ L+ + K +E+ L G M S PD+ +++ L+ K EA +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
+M G PN T++ L++ + G+ D + F M PD TYN LI +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G KE L ++M ++PD T+ ++ C K G E A +I + M I + A+
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 442 T 442
T
Sbjct: 461 T 461
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + E+ G V+ + L++ + + G ++ + D + K+ P+++++NT+I+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 274 CKSGNVEEGF-RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
+ G EG L M E I PD+ T++ L++ DEA +F M G+VP+
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
T++ L++ K +++ M G PD+ +YN L+ K G +KEA + +
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+M A G P+ T++ L++ + G + ++ M + DA + +
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q ++ ++ L+SA G D+A R + + L +L+ K++ +
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
E+ G P + +NVL+ + K G I+ A VF ++ P +++ L++ +
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
+SG ++ +L M+S PD T++ LI + E LF +M + P+
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T+ +I K G + A K Q M I P Y +I + +EA N M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ G P TF +L+ + G ++ + I R+V+ GI
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 108/265 (40%), Gaps = 9/265 (3%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ ++VL+ AY SG + +A+ ++ LL + + +L
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E+ P +N+L+ F + G + +F ++ + + P + ++ +I K G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E+ ++ M + I P ++ +I + + +EA F+ M G P+ TF
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+L+ + G V + ++D GI + T+NA I + G +EA K +M
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 398 GLKPDKIT---------FTTLMDGC 413
PD+ T F L+D C
Sbjct: 557 RCDPDERTLEAVLSVYSFARLVDEC 581
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 132/358 (36%), Gaps = 81/358 (22%)
Query: 121 PFREAHSLLCFLVSRKG-HGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQ 179
P +S+L L + G + LF +++ T +++LI + + G+ + V
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLE-MKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 180 CIRLVRKKNLQIPLRACENL----------------LRYMMK--VKPPGPSWEFYLEIL- 220
+ ++N++ + E + L+YM + P ++ +E
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 221 ----------------ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVV 264
E G P + F+ L++ F + G ++ + + + +
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPD---------VFTFSALINGLCKES--- 312
+FN I Y + G EE + ME R PD V++F+ L++ C+E
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE-CREQFEE 587
Query: 313 ------------------------RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
R D+ N L +EM + +I G D
Sbjct: 588 MKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDD-- 645
Query: 349 VDLALKKFQIMLD----QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
D + + +LD +G + YNAL++ L +G + A ++LNE RGL P+
Sbjct: 646 -DSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 118/202 (58%), Gaps = 20/202 (9%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N ++ G+ R AR +FDE+P R ++S+N L+SGY K+G ++E ++ +M
Sbjct: 51 WNSMVAGYFANLMPRDARKLFDEMPDR----NIISWNGLVSGYMKNGEIDEARKVFDLM- 105
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
ER +V +++AL+ G + D A LF +M + N V++T ++ G +DG++D
Sbjct: 106 PER---NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRID 158
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
A K ++++ D+ D + ++I+GLCK G + EAR++ +EM+ R + IT+TT++
Sbjct: 159 DACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMV 210
Query: 411 DGCCKDGDMESALEIKKRMVEE 432
G ++ ++ A +I M E+
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEK 232
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 87/276 (31%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG-------- 282
+N L+ G+ K G+I AR VFD +P+R VVS+ L+ GY +G V+
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 283 --------FRLKGVMESERI---------FPDV--FTFSALINGLCKESRSDEANHLFDE 323
L G ++ RI PD +++I+GLCKE R DEA +FDE
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG-------------------- 363
M R + +T+TT++ G ++ +VD A K F +M ++
Sbjct: 198 MSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 364 --------IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
++P ++ NA+I+GL + G++ +AR++ + M R
Sbjct: 254 EELFEVMPVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERN----------------- 295
Query: 416 DGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
D ++ ++I +R G EL+A+ + MQK+
Sbjct: 296 DASWQTVIKIHER---NGFELEALDLF---ILMQKQ 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 31/214 (14%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
PP NV + ++G I AR +FD + ++ S+N++++GY + + +
Sbjct: 17 PPTA---NVRITHLSRIGKIHEARKLFDSCDSK----SISSWNSMVAGYFANLMPRDARK 69
Query: 285 LKGVMESERIFPD--VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M PD + +++ L++G K DEA +FD M R N V++T L+ G
Sbjct: 70 LFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKG 119
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+GKVD+A F M ++ + V++ ++ G + G + +A KL + PD
Sbjct: 120 YVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYE------MIPD 169
Query: 403 K--ITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
K I T+++ G CK+G ++ A EI M E +
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 44/273 (16%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ +I + +GF +A+ L++K+ ++ ++L + + + +++
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
C + VY+ +VLM + K G++ ++L+FD P + ++ +N++ISGY G E
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD----IIMWNSIISGYASHGLGE 414
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV-PNGVTFTTL 339
E + +F EM G PN VTF
Sbjct: 415 EALK-----------------------------------VFCEMPLSGSTKPNEVTFVAT 439
Query: 340 IDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+ G V+ LK ++ M G++P Y +++ L + G EA ++++ M
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT--- 496
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
++PD + +L+ C ++ A K+++E
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 23/289 (7%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLV-RKKNLQ 190
LV H + S MP + V + V++ + G +DDA + ++ K N+
Sbjct: 116 LVKGYVHNGKVDVAESLFWKMPEKNKV-SWTVMLIGFLQDGRIDDACKLYEMIPDKDNI- 173
Query: 191 IPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLV 250
A +++ + K + E + E+ E V + ++ G+ + + AR +
Sbjct: 174 ----ARTSMIHGLCKEGRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARKI 225
Query: 251 FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK 310
FD +P++ T VS+ +++ GY ++G +E+ L VM + P V +A+I+GL +
Sbjct: 226 FDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQ 277
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVT 370
+ +A +FD M R N ++ T+I ++G AL F +M QG+RP T
Sbjct: 278 KGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 371 YNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
++++ + L +++ ++ D + LM K G++
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 17/294 (5%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
MP +++++ F+ LIS YT GF + A++ R+ NL++ L + +
Sbjct: 108 MP-ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDL 166
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ ++ G +V+L NVL+ + K G + A +FD +R VS+N+LIS
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD----QVSWNSLIS 222
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC---KESRSDEANHLFDEMCRRG 328
GY + G EE L M + + + +++ C E ++ + + G
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL---- 384
+ + V T L+D K+G + A+K F +M + + VTYNA+I+G ++ ++
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV----VTYNAMISGFLQMDEITDEA 338
Query: 385 -KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
EA KL +M RGL+P TF+ ++ C +E +I + + + D
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
+CK ++ AR +FD +P+R ++SFN+LISGY + G E+ L + D
Sbjct: 92 YCKCRELGFARQLFDRMPERN----IISFNSLISGYTQMGFYEQAMELFLEAREANLKLD 147
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT-----FTTLIDGQCKDGKVDLA 352
FT++ + G C E R D E+ +V NG++ LID K GK+D A
Sbjct: 148 KFTYAGAL-GFCGE-RCDLD---LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
+ F D+ D V++N+LI+G +VG +E LL +M+ GL +++
Sbjct: 203 MSLF----DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
Query: 413 CC---KDGDMESALEIKKRMVEEGIELDAVAFT 442
CC +G +E + I + G+E D V T
Sbjct: 259 CCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 24/288 (8%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q + LI Y G +D +QC K+++ + +++ ++ + +++
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA----SWTSMIDCHVQNEQLESAFD 445
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL----I 270
+ ++ P+ Y +++M + S ++I ++ + +F ++ I
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSG----EQIQGYAIKSGIDAFTSVKTSSI 501
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
S Y KSGN+ L + E PDV T+SA+I+ L + ++EA ++F+ M G+
Sbjct: 502 SMYAKSGNMP----LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGLCKVGDLKEARK 389
PN F ++ C G V LK FQ M D I P+ + L++ L + G L +A
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
L+ + G + +T+ L+ C D I KR+ E +EL+
Sbjct: 618 LI---LSSGFQDHPVTWRALLSSCRVYKDS----VIGKRVAERLMELE 658
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 51/326 (15%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
Q V + +VLI Y+ G +D A+ +++ Q+ + L+ ++V
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD-QVSWNS---LISGYVRVGAAEEPLNL 236
Query: 216 YLEILECGYPPKVYLFNVLMHGFC---KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
++ G Y ++ C G I + K + +V L+
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCK-----ESRSDEANHLFDEMCRR 327
Y K+G+++E +L +M S+ +V T++A+I+G + + S EA LF +M RR
Sbjct: 297 YAKNGSLKEAIKLFSLMPSK----NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 328 GLVPNGVTFTTLIDG----------------QCKD--------GKVDLALKKFQIMLDQG 363
GL P+ TF+ ++ CK+ G + L + G
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 364 I-------RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
+ + D+ ++ ++I+ + L+ A L ++ + ++P++ T + +M C
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 417 GDMESALEIKKRMVEEGIELDAVAFT 442
+ S +I+ ++ GI+ AFT
Sbjct: 473 AALSSGEQIQGYAIKSGID----AFT 494
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 106/209 (50%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G+ + FN ++ K ++ A+ VFD++ K++ P + S+ L+ G+ + N+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
+ M+ E PDV + +IN CK + +EA F+EM +R P+ F +LI
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G + K++ AL+ F+ G + TYNAL+ C +++A K ++EM +G+
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRM 429
P+ T+ ++ + + A E+ + M
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 141/354 (39%), Gaps = 34/354 (9%)
Query: 115 WLATRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQ--SVLVFDVLISAYTDSG 172
W + F+ S L+ G L S + M ++ S F ++ Y +
Sbjct: 117 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARAR 176
Query: 173 FMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFN 232
+ +A+ + + ++ +L + K + G + + + ++ + + P + +
Sbjct: 177 KVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYT 236
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
+L+ G+ + ++ V E+ P VV++ +I+ +CK+ EE R ME
Sbjct: 237 ILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA 352
P F +LINGL E + ++A F+ G T+ L+ C +++ A
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
Query: 353 LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR------------------------ 388
K M +G+ P+ TY+ +++ L ++ KEA
Sbjct: 357 YKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCN 416
Query: 389 --------KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
K+ +EM +G+ P F++L+ C + ++ A E M++ GI
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ +N L+ K+ + + D++ +KL + +F + Y ++ V+E
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEA 181
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
ME + F+ +++ L K +A +FD+M ++ P+ ++T L++G
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
++ + + + M D+G PD+V Y +IN CK +EA + NEM R KP
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
F +L++G + + ALE +R G L+A +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + ++I+A+ + ++A++ + ++N + +L+ + K + EF+
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
G+P + +N L+ +C + A DE+ + + P +++ ++ +
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+E + + M E P V T+ ++ C + R D A ++DEM +G++P F+
Sbjct: 387 RSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
+LI C + K+D A + F MLD GIRP ++ L L G + L+ +M+
Sbjct: 444 SLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 44/296 (14%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F+ ++ + S + DA + ++KK + +++ LL + E E+
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT------------------ 262
+ G+ P V + ++++ CK A F+E+ +R +P+
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 263 -----------------VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI 305
++N L+ YC S +E+ ++ M + + P+ T+ ++
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 306 NGLCKESRSDEANHLFDEM-CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
+ L + RS EA ++ M C P T+ ++ C ++D+A+K + M +G+
Sbjct: 380 HHLIRMQRSKEAYEVYQTMSCE----PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT----TLMDGCCKD 416
P + +++LI LC L EA + NEM G++P F+ TL+D KD
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKD 491
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
++ L+ AY S M+DA + + +R K + R + +L ++++++ ++E Y +
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY-QT 397
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+ C P V + +++ FC + A ++DE+ + + P + F++LI+ C +
Sbjct: 398 MSC--EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKL 455
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
+E M I P FS L L E R D+ L +M R
Sbjct: 456 DEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
LF EM +RGLV N VT+TTLI G + G D+A + F+ M+ G+ PD++TYN L++GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 379 CKVGDLKEA---------RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
CK G L++A L ++ +G+KP+ +T+TT++ G CK G E A + ++M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 430 VEEG 433
E+G
Sbjct: 122 KEDG 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M + + T++ LI GL + D A +F EM G+ P+ +T+ L+DG CK+GK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 349 VDLALKKFQI---------MLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
++ AL ++ + +G++P++VTY +I+G CK G +EA L +M G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRM 429
PD T+ TL+ +DGD ++ E+ K M
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F E+ +R L V++ TLI G ++G+ + + M S+ + PD+ T++ L++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 310 KESRSDEA---------NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
K + ++A LF + +G+ PN VT+TT+I G CK G + A F+ M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
+ G PD TYN LI + GD + +L+ EM + D T+ + D
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + E+ + G + L+ G + GD A+ +F E+ + P ++++N L+ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 274 CK---------SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM 324
CK +G VE+G+ L + + + P+V T++ +I+G CK+ +EA LF +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 325 CRRGLVPNGVTFTTLIDGQCKDG 347
G +P+ T+ TLI +DG
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDG 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCK 415
F+ M +G+ + VTY LI GL + GD A+++ EM + G+ PD +T+ L+DG CK
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 416 DGDMESALEIKKRMVEEGIEL 436
+G +E AL K VE+G +L
Sbjct: 64 NGKLEKALVAGK--VEDGWDL 82
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 95/171 (55%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P + + + L C+ + + ++ S+ F ++ ++S +I+ LCK R E+
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
EM + GL P+ + LI+ CK + A K + M +G + +L TYN LI L +
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
G+ +E+ +L ++M RG++PD+ + +L++G CK+ +E+A+E+ ++ +E
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCME 530
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%)
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
P + EF + ++ G P + + L C+ ++ + + + S++
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+IS CK+G V E + M+ E + PDV ++ALI CK A L+DEM G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
N T+ LI ++G+ + +L+ F ML++GI PD Y +LI GLCK ++ A
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 389 KLLNEMNARGLK 400
++ + R K
Sbjct: 523 EVFRKCMERDHK 534
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P + T S L LC+ +SD ++ + +G +++ +I CK G+V +
Sbjct: 359 LPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYT 418
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCC 414
Q M +G+ PD+ YNALI CK ++ A+KL +EM G K + T+ L+
Sbjct: 419 ALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLS 478
Query: 415 KDGDMESALEIKKRMVEEGIELDAVAF 441
++G+ E +L + +M+E GIE D +
Sbjct: 479 EEGEAEESLRLFDKMLERGIEPDETIY 505
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 3/317 (0%)
Query: 128 LLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
LL L S + A LF ++ + L F V I + S + ++ + V+K
Sbjct: 158 LLAGLTSDGCYDYAQKLFVK-MRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKA 216
Query: 188 NLQIPLRACENL-LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRS 246
NL I L L + K ++ E+ P + V+ F G++
Sbjct: 217 NLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYE 276
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
++V + K + P + I + + E + V+ S + D ALI
Sbjct: 277 RQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI- 335
Query: 307 GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRP 366
G D A M G +P T + L C+ K D +K ++++ +G
Sbjct: 336 GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFS 395
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+L +Y+ +I+ LCK G ++E+ L EM GL PD + L++ CCK + A ++
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 427 KRMVEEGIELDAVAFTM 443
M EG +++ + +
Sbjct: 456 DEMFVEGCKMNLTTYNV 472
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%)
Query: 175 DDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVL 234
D ++ L+ K L++ ++ ++ K S+ E+ + G P V L+N L
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ CK IR A+ ++DE+ + + ++N LI + G EE RL M I
Sbjct: 439 IEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
PD + +LI GLCKE++ + A +F + R
Sbjct: 499 EPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 114/218 (52%), Gaps = 18/218 (8%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
+Y +N ++ G+ K G + AR+VFD +P+R VVS+NT++ GY + GN+ E
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEAN-HLFDEMCRRGLVPNGVTFTTLIDGQCKD 346
I + F+F+ L+ C +SR + N ++ G + N V ++ID K
Sbjct: 169 EFRRSGIKFNEFSFAGLLTA-CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK--I 404
G+++ A + F D+ D+ + LI+G K+GD++ A KL EM P+K +
Sbjct: 228 GQMESAKRCF----DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEM------PEKNPV 277
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++T L+ G + G AL++ ++M+ G++ + F+
Sbjct: 278 SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 8/208 (3%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
++++ L+ G+ K+GD+ +A +F E+P++ VS+ LI+GY + G+ L
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M + + P+ FTFS+ + + + M R + PN + ++LID K G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++ + + F+I D + D V +N +I+ L + G +A ++L++M ++P++ T
Sbjct: 361 SLEASERVFRICDD---KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 408 TLMDGCCKDGDMESALEIKKRM-VEEGI 434
+++ C G +E L + M V+ GI
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGI 445
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 133 VSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI- 191
++R+ HG L A FL + S+ I AY G M+ A +C + K++ I
Sbjct: 197 LNRQAHGQV--LVAGFLSNVVLSCSI------IDAYAKCGQMESAKRCFDEMTVKDIHIW 248
Query: 192 -----------PLRACENLLRYMMKVKPPGPSW-----------------EFYLEILECG 223
+ A E L M + P SW + + +++ G
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPV--SWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P+ + F+ + + +R + + + + +RP + ++LI Y KSG++E
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE--- 363
Query: 284 RLKGVMESERIF------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
SER+F D ++ +I+ L + +A + D+M + + PN T
Sbjct: 364 ------ASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 338 TLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+++ G V+ L+ F+ M + GI PD Y LI+ L + G KE + + EM
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP- 476
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+PDK + ++ C G+ E+ K+ +E I+LD
Sbjct: 477 --FEPDKHIWNAILGVCRIHGNE----ELGKKAADELIKLD 511
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 151 TMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPG 210
+MP ++ V+ ++ ++ Y G + +A+ + R+ ++ + LL +K +
Sbjct: 138 SMP-ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ 196
Query: 211 PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
+ + + ++L G+ V L ++ + K G + SA+ FDE+ +
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK------------- 243
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
D+ ++ LI+G K + A LF EM +
Sbjct: 244 --------------------------DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK--- 274
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
N V++T LI G + G + AL F+ M+ G++P+ T+++ + + L+ +++
Sbjct: 275 -NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
M ++P+ I ++L+D K G +E++
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
FN L+ C+ + +A+ VF+ K + S+N +ISG+ K G VEE ++ M
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
PD ++S LI GL + R +++ +FD + +G VP+ + +I D
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+++ ++ MLD+ P+L TY+ L++GL K + +A ++ EM +RG+ P T+ +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 411 DGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
C G +A+ I ++ + G + A+ +
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL 435
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
E++E G+ P ++ L+ G + G I + +FD I + P +N +I + +
Sbjct: 280 EMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ +E R M E P++ T+S L++GL K + +A +F+EM RG++P T
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
+ + C G A+ +Q G R Y L+ L + G + +EM
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
G D + ++DG C G +E+A+ + + + +G
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 144/300 (48%), Gaps = 34/300 (11%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQS---VLVFDVLISAYTDSGFMD 175
R F +L+ +S G A L L +P + S V+ + L+S Y +G++D
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHL----LDKIPQRGSINRVVYWTSLLSKYAKTGYLD 94
Query: 176 DAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+A ++ ++N+ C +L +K + +W + E+ P V + V++
Sbjct: 95 EARVLFEVMPERNIV----TCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVML 145
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
C G A +FDE+P+R VVS+NTL++G ++G++E+ ++ M S
Sbjct: 146 TALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--- 198
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
DV +++A+I G + +EA LF +M + N VT+T+++ G C+ G V A +
Sbjct: 199 -DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRL 253
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM--NARGLKPDKITFTTLMDGC 413
F M ++ I V++ A+I+G +EA L EM + + P+ T +L C
Sbjct: 254 FCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 115/213 (53%), Gaps = 23/213 (10%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +V + L+ + K G + AR++F+ +P+R +V+ N +++GY K + E
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEA 127
Query: 283 FRLKGVMESERIFP-DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+ L R P +V +++ ++ LC + RS++A LFDEM R N V++ TL+
Sbjct: 128 WTLF------REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVT 177
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G ++G ++ A + F M + D+V++NA+I G + ++EA+ L +M+ + +
Sbjct: 178 GLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV-- 231
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+T+T+++ G C+ GD+ A + M E I
Sbjct: 232 --VTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK--LRPTVVSFNTLISGYCK 275
+++ CG P ++VL+ ++ + + I K P ++ N+L+S Y K
Sbjct: 456 DMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAK 515
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G +E+ + + M + D +++++I GL +D+A +LF EM G PN VT
Sbjct: 516 CGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
F ++ G + L+ F+ M + I+P + Y ++I+ L + G LKEA + +
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFI--- 628
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
+A PD + L+ C + + A I +R +ELD V
Sbjct: 629 SALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPV 673
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 48/237 (20%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N++++ + K GD+ A +F+ + K VS+ ++I GY ++G+V F L +
Sbjct: 372 NIIINRYLKNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ-------- 343
+ D T++ +I+GL + EA L +M R GL P T++ L+
Sbjct: 429 K----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 344 -------------CKD----------------GKVDLALKKFQIMLDQGIRPDLVTYNAL 374
C D G ++ A + F M ++ D V++N++
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSM 540
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
I GL G +A L EM G KP+ +TF ++ C G + LE+ K M E
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
A HL D++ +RG + V +T+L+ K G +D A F++M ++ I VT NA++
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI----VTCNAML 115
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
G K + EA L EM + +++T ++ C DG E A+E+ M E +
Sbjct: 116 TGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV 169
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 51/234 (21%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
+ L+N ++ G+ ++G++ AR +FD++P R V+S+NT++ GY G++E
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMPCRD----VMSWNTVLEGYANIGDMEA------ 139
Query: 288 VMESERIFPD-----VFTFSALINGLCKESRSDEANHLFDEMCRRG-LVPNGVTFTTLID 341
ER+F D VF+++ LI G + R E F M G +VPN T T ++
Sbjct: 140 ---CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 342 GQCKDG------------------KVDLALKK-----------FQIMLD--QGI-RPDLV 369
K G KVD+ +K +I ++ +GI R DL+
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
++N +INGL G EA L +EM G+ PDK+TF ++ C G +E L
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 267 NTLISGYCKSGNVEEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
N LI Y K G +E + KG+ D+ +++ +INGL EA +LF EM
Sbjct: 228 NALIDMYGKCGAIEIAMEVFKGIKRR-----DLISWNTMINGLAAHGHGTEALNLFHEMK 282
Query: 326 RRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGLCKVGDL 384
G+ P+ VTF ++ G V+ L F M D I P++ +++ L + G L
Sbjct: 283 NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFL 342
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+A + +N+M +K D + + TL+ G K + ++I + +EE I+L+
Sbjct: 343 TQAVEFINKMP---VKADAVIWATLL-GASK---VYKKVDIGEVALEELIKLE 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 227 KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLK 286
+++LF +L C +G I SA VF E+ ++ VV + ++I+GY + K
Sbjct: 31 QMFLFGML----CLMGVIASANKVFCEMVEK----NVVLWTSMINGYLLN---------K 73
Query: 287 GVMESERIFP-----DVFTFSALINGLCKESRSDEANHLFDEM-CRRGLVPNGVTFTTLI 340
++ + R F D+ ++ +I+G + EA LFD+M CR + +++ T++
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR-----DVMSWNTVL 128
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG-L 399
+G G ++ + F M ++ + ++N LI G + G + E M G +
Sbjct: 129 EGYANIGDMEACERVFDDMPERNV----FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 400 KPDKITFTTLMDGCCKDG 417
P+ T T ++ C K G
Sbjct: 185 VPNDATMTLVLSACAKLG 202
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L LC AN +F EM + N V +T++I+G + + A + F D
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEK----NVVLWTSMINGYLLNKDLVSARRYF----DLS 85
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
D+V +N +I+G ++G++ EAR L ++M R D +++ T+++G GDME+
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACE 141
Query: 424 EIKKRMVEEGI 434
+ M E +
Sbjct: 142 RVFDDMPERNV 152
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 12/172 (6%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
++LI+ Y K G+++E + G E++R D+ + +A+ING + +S EA LF++ +
Sbjct: 450 SSLINMYSKCGSIKEASMIFG--ETDR--DDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLK 385
G P+ VTF +++ G++DL F +M + +RP Y +++ LC+ G L
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+A K++NEM+ K D + +TTL+ C GD+E +R E +ELD
Sbjct: 566 DAEKMINEMS---WKKDDVVWTTLLIACKAKGDIERG----RRAAERILELD 610
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 30/278 (10%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP---------LRACENLLRYMM 204
+++ V+ + LI AY G AV+ ++ +N Q+P AC +L R +
Sbjct: 271 SERDVVSWTSLIVAYKRIGQEVKAVET--FIKMRNSQVPPNEQTFASMFSACASLSRLV- 327
Query: 205 KVKPPGPSW--EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT 262
W + + +L G + + N +M + G++ SA ++F + R
Sbjct: 328 --------WGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRD---- 375
Query: 263 VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
++S++T+I GYC++G EEGF+ M P F ++L++ + + +
Sbjct: 376 IISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA 435
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
GL N ++LI+ K G ++K+ ++ + R D+V+ A+ING + G
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCG----SIKEASMIFGETDRDDIVSLTAMINGYAEHG 491
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDME 420
KEA L + G +PD +TF +++ C G ++
Sbjct: 492 KSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLD 529
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME- 290
N + G++R+AR VFD++P +VS+ ++I Y + N +E L M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMP----HGDIVSWTSIIKRYVTANNSDEALILFSAMRV 99
Query: 291 -SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
+ PD S ++ + S L + L+ + ++L+D + GK+
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 350 DLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTL 409
D + + F M + + VT+ A+I GL G KE +EM+ D TF
Sbjct: 160 DKSCRVFSEMPFR----NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 410 MDGC 413
+ C
Sbjct: 216 LKAC 219
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
VY+ + L+ + +VG I + VF E+P R V++ +I+G +G +EG
Sbjct: 141 SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN----AVTWTAIITGLVHAGRYKEGLTY 196
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
M D +TF+ + + + + RG V +L +
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTE 256
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G++ L F+ M ++ D+V++ +LI ++G +A + +M + P++ T
Sbjct: 257 CGEMQDGLCLFENMSER----DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 406 FTTLMDGC 413
F ++ C
Sbjct: 313 FASMFSAC 320
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 27/316 (8%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
R +R A +L + S KGH +S +D+ + + D
Sbjct: 98 RDDWRSALGILKWAESCKGHKHSSD----------------AYDMAVDILGKAKKWDRMK 141
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL----ECGYPPKVYLFNVL 234
+ + +R L + L N + +M+ WE + I E G N+L
Sbjct: 142 EFVERMRGDKL-VTL----NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLL 196
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ CK + AR+V ++ K + P +FN I G+CK+ VEE M+
Sbjct: 197 LDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P V +++ +I C++ + + EM G PN +T+TT++ + + AL+
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN-EMNARGLKPDKITFTTLMDGC 413
M G +PD + YN LI+ L + G L+EA ++ EM G+ + T+ +++
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 414 CKDGDMESALEIKKRM 429
C + + A+E+ K M
Sbjct: 376 CHHDEEDKAIELLKEM 391
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 202 YMMKVKPPGPS--WEFYLEILECGYPPKVYLFNV---LMHGFCKVGDIRSARLVFDEIPK 256
Y M V G + W+ E +E K+ N +M F G+ A +FD + +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
L S N L+ CK VE+ R+ + I P+ TF+ I+G CK +R +E
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A EM G P +++TT+I C+ + + M G P+ +TY +++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI-KKRMVEEGIE 435
L + +EA ++ M G KPD + + L+ + G +E A + + M E G+
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 436 LDAVAFT 442
++ +
Sbjct: 363 INTSTYN 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+EA +FD + GL N + L+D CK+ +V+ A + + L I P+ T+N
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIF 230
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I+G CK ++EA + EM G +P I++TT++ C+ + E+ M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 435 ELDAVAFT--MEEVAMQKE 451
+++ +T M + QKE
Sbjct: 291 PPNSITYTTIMSSLNAQKE 309
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 27/316 (8%)
Query: 119 RPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
R +R A +L + S KGH +S +D+ + + D
Sbjct: 98 RDDWRSALGILKWAESCKGHKHSSD----------------AYDMAVDILGKAKKWDRMK 141
Query: 179 QCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL----ECGYPPKVYLFNVL 234
+ + +R L + L N + +M+ WE + I E G N+L
Sbjct: 142 EFVERMRGDKL-VTL----NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLL 196
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERI 294
+ CK + AR+V ++ K + P +FN I G+CK+ VEE M+
Sbjct: 197 LDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 295 FPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALK 354
P V +++ +I C++ + + EM G PN +T+TT++ + + AL+
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 355 KFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN-EMNARGLKPDKITFTTLMDGC 413
M G +PD + YN LI+ L + G L+EA ++ EM G+ + T+ +++
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 414 CKDGDMESALEIKKRM 429
C + + A+E+ K M
Sbjct: 376 CHHDEEDKAIELLKEM 391
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 202 YMMKVKPPGPS--WEFYLEILECGYPPKVYLFNV---LMHGFCKVGDIRSARLVFDEIPK 256
Y M V G + W+ E +E K+ N +M F G+ A +FD + +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
L S N L+ CK VE+ R+ + I P+ TF+ I+G CK +R +E
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALIN 376
A EM G P +++TT+I C+ + + M G P+ +TY +++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 377 GLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI-KKRMVEEGIE 435
L + +EA ++ M G KPD + + L+ + G +E A + + M E G+
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 436 LDAVAFT 442
++ +
Sbjct: 363 INTSTYN 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+EA +FD + GL N + L+D CK+ +V+ A + + L I P+ T+N
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIF 230
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I+G CK ++EA + EM G +P I++TT++ C+ + E+ M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 435 ELDAVAFT--MEEVAMQKE 451
+++ +T M + QKE
Sbjct: 291 PPNSITYTTIMSSLNAQKE 309
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL----- 285
+N ++ G K G++R AR +FDE+P+R L +S+NT++ GY + + + F L
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 286 ----------------KGVMESERIFPD--------VFTFSALINGLCKESRSDEANHLF 321
G ME R+ D V T++ +I G ++ EA+ L
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 322 DEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKV 381
D+M GL + +++ + G + L ++ I+ + + NAL++ K
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 382 GDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
G+LK+A + N++ K D +++ T++ G G + A+E+ RM EGI D V F
Sbjct: 364 GNLKKAFDVFNDIP----KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
VF+++ + P V N+LI + ++ + F + M+ +F D FT+ L+
Sbjct: 73 VFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 128
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLID--GQCKDGKVDLALKKFQIMLDQGIRPD 367
+S + + + + GL + LID +C V A+K F+ M ++ D
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----D 184
Query: 368 LVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
V++N+++ GL K G+L++AR+L +EM R D I++ T++DG + +M A E+ +
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFE 240
Query: 428 RMVE 431
+M E
Sbjct: 241 KMPE 244
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 39/242 (16%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V + +++ G+ + G ++ A + D++ L+ + ++++ +SG + G R+
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 288 VMESERIFPDVFTFSALIN-------------------------------GLCKESRSDE 316
+++ + + + +AL++ GL E
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD-QGIRPDLVTYNALI 375
A LF M R G+ P+ VTF ++ G +D + F M + P + Y L+
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ L +VG LKEA K++ M ++P+ + + L+ G C+ M + ++I K +++ ++
Sbjct: 460 DLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALL-GACR---MHNEVDIAKEVLDNLVK 512
Query: 436 LD 437
LD
Sbjct: 513 LD 514
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 128 LLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKK 187
L S G G A LF P + + + +I AY ++ D+ R +RK+
Sbjct: 16 FLVISASAVGIGYARKLF----DQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE 71
Query: 188 NLQIP--------LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFC 239
P ++C + ++ W F G+ +Y+ ++ +
Sbjct: 72 TCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF-------GFCADMYVSTGVVDMYA 124
Query: 240 KVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVF 299
K G + AR FDE+P R + VS+ LISGY + G ++ +L M + DV
Sbjct: 125 KFGKMGCARNAFDEMPHR----SEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVV 177
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
++A+++G K A LFDEM + + +T+TT+I G C +D A K F M
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA-RGLKPDKITFTTLM 410
++ +LV++N +I G C+ +E +L EM A L PD +T +++
Sbjct: 234 PER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 73/270 (27%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V + ++HG+C + DI +AR +FD +P+R L VS+NT+I GYC++ +EG RL
Sbjct: 207 VITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 288 VME-SERIFPDVFTF-----------------------------------SALINGLCKE 311
M+ + + PD T +A+++ K
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 312 SRSDEANHLFDEMCRRGLV------------------------------PNGVTFTTLID 341
++A +FDEM + + P+ +T +I
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVIT 382
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G V+ K F +M + G+ + Y +++ L + G LKEA L+ M +P
Sbjct: 383 ACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM---PFEP 439
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+ I ++ + C + D+E A I K+ VE
Sbjct: 440 NGIILSSFLSACGQYKDIERAERILKKAVE 469
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V ++N +M GF K GD+ SAR +FDE+ + TV+++ T+I GYC +++ +L
Sbjct: 176 VVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-CRRGLVPNGVTFTTLIDGQCKD 346
M ER ++ +++ +I G C+ + E LF EM L P+ VT +++
Sbjct: 232 AM-PER---NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK--I 404
G + L + + + + A+++ K G++++A+++ +EM P+K
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM------PEKQVA 341
Query: 405 TFTTLMDGCCKDGDMESALEI-KKRMVEE 432
++ ++ G +G+ +AL++ M+EE
Sbjct: 342 SWNAMIHGYALNGNARAALDLFVTMMIEE 370
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 50/227 (22%)
Query: 244 IRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF-PDVFTFS 302
I AR +FD+ P+R + +S N++I Y ++ + F L + E F PD FTF+
Sbjct: 26 IGYARKLFDQRPQRD--DSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFT 82
Query: 303 ALIN---------------------GLC--------------KESRSDEANHLFDEMCRR 327
L G C K + A + FDEM R
Sbjct: 83 TLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR 142
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
+ V++T LI G + G++DLA K F M D+V YNA+++G K GD+ A
Sbjct: 143 ----SEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSA 195
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
R+L +EM + + IT+TT++ G C D+++A ++ M E +
Sbjct: 196 RRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPERNL 238
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 121 PFREAHSLLC--FLVSRKGHGSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDD 176
P R+++ +L F + K + L++ F + + + ++V+ +L+ A D+G +DD
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW--EFYLEILECGYPPKVYLFNVL 234
A++ + + +K L+ P R ++ + G E L G P + ++ +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL--KGVMESE 292
+ G + V + + PT + + C++G ++E + K +M+
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG- 363
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDL 351
P V ++ LI GLC + +S EA +M ++ V N T+ TL+DG C+DG+
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + + ML + P + TY+ +I GLC + EA L EM ++ + P+ + L +
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 412 GCC 414
C
Sbjct: 484 SVC 486
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
F ++I + ++G +E+ L + +F L+ + KES + A H+F + C
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 326 RRGLVPNGVT-FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
V + +T L+ C+ + DLA + FQ M QG PD +Y L+ G C G L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 385 KEARKLLNEM----NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+EA LL M + +G D + + L+D C G+++ A+EI +++ +G++
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+ + I + G + ++ +L+ C G++ A + +I ++ L+ ++ + +G
Sbjct: 211 YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Query: 273 YCKSGNVEEGF-RLKGVMESERI---FPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+ +S + EG R+K ++ I P + ++SA+ L +E + E + M +G
Sbjct: 271 HWESSS--EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEA 387
P + + C+ GK+ A+ + QG P + YN LI GLC G EA
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 388 RKLLNEMNAR-GLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
L +M+ + ++ T+ TL+DG C+DG A ++ + M+
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 9/282 (3%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
VF +I ++ +G ++DA+ + + + N + + LL+ M+K + + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 220 LECGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
G+ ++ N+LM C+V A VF E+ + P S+ L+ G+C G
Sbjct: 143 CY-GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 278 NVEEGFRLKGVM----ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
+EE L M + D+ + L++ LC D+A + ++ R+GL
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 334 VTFTTLIDGQCKDGK--VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + G + ++ + L +G P L +Y+A+ L + G L E ++L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
M ++G +P + + C+ G ++ A+ + + + +G
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 121 PFREAHSLLC--FLVSRKGHGSASSLFASF--LQTMPTQQSVLVFDVLISAYTDSGFMDD 176
P R+++ +L F + K + L++ F + + + ++V+ +L+ A D+G +DD
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 177 AVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW--EFYLEILECGYPPKVYLFNVL 234
A++ + + +K L+ P R ++ + G E L G P + ++ +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 235 MHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL--KGVMESE 292
+ G + V + + PT + + C++G ++E + K +M+
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG- 363
Query: 293 RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPNGVTFTTLIDGQCKDGKVDL 351
P V ++ LI GLC + +S EA +M ++ V N T+ TL+DG C+DG+
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + + ML + P + TY+ +I GLC + EA L EM ++ + P+ + L +
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 412 GCC 414
C
Sbjct: 484 SVC 486
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 266 FNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC 325
F ++I + ++G +E+ L + +F L+ + KES + A H+F + C
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 326 RRGLVPNGVT-FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
V + +T L+ C+ + DLA + FQ M QG PD +Y L+ G C G L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 385 KEARKLLNEM----NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+EA LL M + +G D + + L+D C G+++ A+EI +++ +G++
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 213 WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
+ + I + G + ++ +L+ C G++ A + +I ++ L+ ++ + +G
Sbjct: 211 YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Query: 273 YCKSGNVEEGF-RLKGVMESERI---FPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+ +S + EG R+K ++ I P + ++SA+ L +E + E + M +G
Sbjct: 271 HWESSS--EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEA 387
P + + C+ GK+ A+ + QG P + YN LI GLC G EA
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 388 RKLLNEMNAR-GLKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
L +M+ + ++ T+ TL+DG C+DG A ++ + M+
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 9/282 (3%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEI 219
VF +I ++ +G ++DA+ + + + N + + LL+ M+K + + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 220 LECGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
G+ ++ N+LM C+V A VF E+ + P S+ L+ G+C G
Sbjct: 143 CY-GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 278 NVEEGFRLKGVM----ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
+EE L M + D+ + L++ LC D+A + ++ R+GL
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 334 VTFTTLIDGQCKDGK--VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + G + ++ + L +G P L +Y+A+ L + G L E ++L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
M ++G +P + + C+ G ++ A+ + + + +G
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 140/315 (44%), Gaps = 67/315 (21%)
Query: 138 HGSASSLFAS--FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRA 195
+G LF++ MP + +V + L+ AY SG +++A L+ ++NL
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAV-SWTALVVAYVKSGELEEAKSMFDLMPERNL------ 207
Query: 196 CENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
SW N L+ G K GD+ +A+ +FDE+P
Sbjct: 208 ---------------GSW------------------NALVDGLVKSGDLVNAKKLFDEMP 234
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
KR ++S+ ++I GY K G++ + + E R DV +SALI G + + +
Sbjct: 235 KRD----IISYTSMIDGYAKGGDMVSA---RDLFEEARGV-DVRAWSALILGYAQNGQPN 286
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG------KVDLAL-KKFQIMLDQGIRPDL 368
EA +F EMC + + P+ L+ + G KVD L ++ + P L
Sbjct: 287 EAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPAL 346
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKR 428
+ NA K G + A KL EM R D +++ ++M+G G A+ + ++
Sbjct: 347 IDMNA------KCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 429 MVEEGIELDAVAFTM 443
MV+EGI D VAFT+
Sbjct: 397 MVDEGIVPDEVAFTV 411
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+L G+ V + + + K D+ SAR VF E+P+R VS+ L+ Y KSG
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGE 191
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+EE + +M ER ++ +++AL++GL K A LFDEM +R ++ ++T+
Sbjct: 192 LEEAKSMFDLM-PER---NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTS 243
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+IDG K G + A F+ + D+ ++ALI G + G EA K+ +EM A+
Sbjct: 244 MIDGYAKGGDMVSARDLFE----EARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 399 LKPDKITFTTLMDGCCKDGDME 420
+KPD+ LM C + G E
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFE 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 16/283 (5%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
MP ++ ++ + +I Y G M A R + +RA L+ + P
Sbjct: 233 MP-KRDIISYTSMIDGYAKGGDMVSARDLFEEARG----VDVRAWSALILGYAQNGQPNE 287
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR--KLRPTVVSFNTL 269
+++ + E+ P ++ LM ++G V + +R K V L
Sbjct: 288 AFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV-VPAL 346
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
I K G+++ +L M D+ ++ +++ G+ EA LF++M G+
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEAR 388
VP+ V FT ++ + V+ L+ F++M + I Y+ ++N L + G LKEA
Sbjct: 403 VPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAY 462
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+L+ M + + +L+ GC G+ E A + + + E
Sbjct: 463 ELIKSMP---FEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE 502
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR-LKGVMESERIFPDVFTFSALINGL 308
VF+ +P P +N LI GY E L +M + PD +TF ++
Sbjct: 65 VFERVPS----PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVC 120
Query: 309 CKESRSDEANHLFDEMCRRGLVPNGVTFTTLID--GQCKDGKVDLALKKFQIMLDQGIRP 366
+ + + + R G + V T+ +D G+CKD + A K F M ++
Sbjct: 121 SNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD--LFSARKVFGEMPER---- 174
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+ V++ AL+ K G+L+EA+ + + M R L ++ L+DG K GD+ +A
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNA---- 226
Query: 427 KRMVEEGIELDAVAFT 442
K++ +E + D +++T
Sbjct: 227 KKLFDEMPKRDIISYT 242
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE 292
++M + D A FD + K K P +F L+ C+ G++E+ ++ S+
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASK 251
Query: 293 RIFP-DVFTFSALINGLCK-ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
++FP DV F+ ++NG C + EA ++ EM + PN +++ +I K G +
Sbjct: 252 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+L+ + M +G+ P + YN+L+ L + EA KL+ ++N GLKPD +T+ +++
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 411 DGCCKDGDMESALEIKKRMVEEGIE--LDAVAFTMEEVAMQK 450
C+ G ++ A + M+ E + +D +E V +K
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEK 413
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 224 YPPKVYLFNVLMHGFCKVG-DIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
+P V FNV+++G+C + D+ A+ ++ E+ + P S++ +IS + K GN+ +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
RL M+ + P + +++L+ L +E DEA L ++ GL P+ VT+ ++I
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
C+ GK+D+A M+ + + P + T++A + + + ++ ++L +M L P
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPT 429
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRM 429
+ TF ++ K E+AL+I M
Sbjct: 430 EETFLLILGKLFKGKQPENALKIWAEM 456
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 14/284 (4%)
Query: 121 PFREA-HSLLCFLVSRKGH-GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAV 178
P+ EA LLC L R GH A + + P V F+V+++ + + D
Sbjct: 222 PYDEAFQGLLCALC-RHGHIEKAEEFMLASKKLFPV--DVEGFNVILNGWCN--IWTDVT 276
Query: 179 QCIRLVRKKN---LQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLM 235
+ R+ R+ + + +++ KV S Y E+ + G P + ++N L+
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 236 HGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIF 295
+ + A + ++ + L+P V++N++I C++G ++ + M SE +
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 296 PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKK 355
P V TF A + + E + + +M L P TF ++ K + + ALK
Sbjct: 397 PTVDTFHAFLEAVNFEKTLE----VLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Query: 356 FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ M I + Y A I GL G L++AR++ +EM ++G
Sbjct: 453 WAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 29/231 (12%)
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGD--------IRSARL 249
N+ R+M+ K LEC P + +++L G+ + + R
Sbjct: 228 NIFRHMVTSKN-----------LEC--RPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR----LKGVMESERIFPDVFTFSALI 305
+F ++ + P V + N L+ GY S +V + R + V + E P+ FT+ LI
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCE---PNSFTYDYLI 331
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
+GLC + R+ A L EM +G VPNG ++ +L++ G++D A+K M++ G
Sbjct: 332 HGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKD 416
D ++Y L++ C+ G EA +LL + + L D+ ++ L++ KD
Sbjct: 392 VDFISYRTLVDESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLVNVLHKD 441
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRK---LRPTVVSFNTLISGYCKSGN-------- 278
L+N ++ F K G + A +F + K RPT+ +++ L GN
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVY 268
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-----CRRGLVPNG 333
+E L M I PDVF + L+ G ++A +F +M C PN
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCE----PNS 324
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T+ LI G C G+ A + M +G P+ +YN+L+N G++ +A K L E
Sbjct: 325 FTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWE 384
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
M G D I++ TL+D C+ G + A + + + E+ +
Sbjct: 385 MIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 266 FNTLISGYCKSGNVEEG---FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH--- 319
+N++I + K+G + FR ++ P + T+ L L + NH
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 320 -----LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF-QIMLDQGIRPDLVTYNA 373
LF +M G+ P+ L+ G V+ AL+ F Q+ + P+ TY+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 374 LINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
LI+GLC G AR+LL+EM +G P+ ++ +L++ G+++ A++ M+E G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 434 IELDAVAF 441
+D +++
Sbjct: 390 RVVDFISY 397
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCI--RLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
+++++ ++VL+ Y G+ D+A+ C+ R++ ++ + +LR +
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAM-CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
E ++ ++ GY + + N L+ + K GD++SARL+FD +P+R ++S+N +IS
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD----IISWNAMIS 270
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALING--LCKESRSDEANHLFDEMCRRGL 329
GY ++G EG L M + PD+ T +++I+ L + R H + + G
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY--VITTGF 328
Query: 330 VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARK 389
+ +L G A K F M R D+V++ +I+G +A
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRME----RKDIVSWTTMISGYEYNFLPDKAID 384
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
M+ +KPD+IT ++ C GD+++ +E+ K
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL-K 286
V L N + F + G++ A VF ++ +R L S+N L+ GY K G +E L
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNL----FSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 287 GVMESERIFPDVFTFSALI---NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
++ + PDV+TF ++ G+ +R E H+ + R G + LI
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV-HV--HVVRYGYELDIDVVNALITMY 241
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
K G V K +++ D+ R D++++NA+I+G + G E +L M + PD
Sbjct: 242 VKCGDV----KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+T T+++ C GD +I ++ G +D
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N L+ Y + G + + S++ DV +++ L+ G + + LFD M +
Sbjct: 537 NALLDMYVRCGRMNTAW---SQFNSQK--KDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
+ P+ +TF +L+ G K V L F M D G+ P+L Y +++ L + G+L+E
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGC 413
A K + +M + PD + L++ C
Sbjct: 652 AHKFIQKMP---VTPDPAVWGALLNAC 675
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 17/229 (7%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + +L G +L N L+ + + G + +A F+ K V S+N L++GY
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-----DVTSWNILLTGY 573
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
+ G L M R+ PD TF +L+ G K + F +M G+ PN
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG---DLKEARKL 390
+ ++D + G++ A K Q M + PD + AL+N C++ DL E
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGALLNA-CRIHHKIDLGE---- 685
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKD-GDMESALEIKKRMVEEGIELDA 438
L+ + L + + L+ D G ++++ M E G+ +DA
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGL 329
+ G C +G +EE +L M+ R+ D F AL+ LC+ R+ E + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVR-LCEWKRAQEEGSKVYSIALSSM 124
Query: 330 VPNGVTF-TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
GV + + G + A F M ++ +L ++N L+ G K G EA
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSER----NLFSWNVLVGGYAKQGYFDEAM 180
Query: 389 KLLNEM-NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
L + M G+KPD TF ++ C D+ E+ +V G ELD
Sbjct: 181 CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 10/286 (3%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
MP ++ ++ ++ +IS Y ++G + ++ +R ++ L +++ +
Sbjct: 257 MP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ + ++ G+ + + N L + G R A +F R R +VS+ T+IS
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF----SRMERKDIVSWTTMIS 371
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
GY + ++ +M+ + + PD T +A+++ D L + L+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ LI+ K +D AL F + R +++++ ++I GL EA L
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNI----PRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+M L+P+ IT T + C + G + EI ++ G+ LD
Sbjct: 488 RQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE--ILE 221
L+ +T G + A ++ +++KN+ +P+ +NLL ++ S + E IL
Sbjct: 76 LVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILP 135
Query: 222 CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE 281
P + L F D + EI + L ++ N +I + ++ +++
Sbjct: 136 GKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDK 195
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP-NGVTFTTLI 340
+ M+ PDV T++++++ L + +E + M V N +T+ T++
Sbjct: 196 VLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVL 255
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+G K + D+ L + M+ GI PDL++Y A+I+ L + G++KE+ +L +EM R ++
Sbjct: 256 NGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIR 315
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRM 429
P + L+D K GD +SAL++ +
Sbjct: 316 PSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + I+ G L++ LM + K G I AR +FD+I ++ VVS+ ++I Y
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD----VVSWTSMIDRY 294
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
KS EGF L + P+ +TF+ ++N + + + M R G P
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
++L+D K G ++ A + ++D +PDLV++ +LI G + G EA K +
Sbjct: 355 FASSSLVDMYTKCGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+ G KPD +TF ++ C G +E LE
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 52/311 (16%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
F I + +AVQ + +K P NL++ + + + + I
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKP----PASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
G+ P + ++N L+ + K G + AR VFDE+P R L S+N +++GY + G +E
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL----CSWNVMVNGYAEVGLLE 168
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM---------------- 324
E +L M + D ++++A++ G K+ + +EA L+ M
Sbjct: 169 EARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 325 --------------------CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
R GL + V +++L+D K G +D A F D+ +
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF----DKIV 280
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
D+V++ ++I+ K +E L +E+ +P++ TF +++ C E +
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 425 IKKRMVEEGIE 435
+ M G +
Sbjct: 341 VHGYMTRVGFD 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
++V+++ Y + G +++A + + +K+ + Y+ K +P + L
Sbjct: 154 WNVMVNGYAEVGLLEEARKLFDEMTEKD---SYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
P ++ ++ + V IR + + I + L V +++L+ Y K G ++
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E + + + DV +++++I+ K SR E LF E+ PN TF ++
Sbjct: 271 EARNIFDKI----VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+ +L + M G P ++L++ K G+++ A+ +++ K
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP----K 382
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
PD +++T+L+ GC ++G + AL+ +++ G + D V F
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 148/350 (42%), Gaps = 78/350 (22%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
++ + + +I +G +A++C R ++ + L++ ++L + +
Sbjct: 232 EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ I+ + +Y+ + L+ +CK + A+ VFD + ++ VVS+ ++ GY
Sbjct: 292 IHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYG 347
Query: 275 KSG-----------------------------------NVEEGFRLKG------------ 287
++G ++EEG + G
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 288 --------------VMESERIFP-----DVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+ +S R+F D +++A+++ + R+ E LFD+M + G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEA 387
L P+GVT T +I + G V+ + F++M + GI P + Y+ +I+ + G L+EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+ +N M PD I +TTL+ C G+ LEI K E IELD
Sbjct: 528 MRFINGMP---FPPDAIGWTTLLSACRNKGN----LEIGKWAAESLIELD 570
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P+ +L+N ++H + + AR VFD IP+ P + S+N L+ Y K+G + E
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISE---- 90
Query: 286 KGVMESE-RIFP--DVFTFSALINGLCKESRSDEANHLFDEMCRR-GLVPNGVTFTTLID 341
MES P D T++ LI G A ++ M R VT T++
Sbjct: 91 ---MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
+G V L + ++ G L+ + L+ VG + +A+K+ ++ R
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR---- 203
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
+ + + +LM G G +E AL++ + M ++ + A+ + + + KE
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 45/234 (19%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P ++ +N L+ + K G I F+++P R V++N LI GY SG V G +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRD----GVTWNVLIEGYSLSGLV--GAAV 123
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEAN---HLFDEMCRRGLVP----------- 331
K R F T L+ L S + + + ++ + G
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 332 --------------------NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
N V + +L+ G G ++ AL+ F+ G+ D V++
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSW 238
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
A+I GL + G KEA + EM +GLK D+ F +++ C G + +I
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 60/331 (18%)
Query: 141 ASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ-----IP--L 193
ASSL S + + ++V +++ +I A++ +G +A++ +R+ + P +
Sbjct: 56 ASSL--SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVI 113
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE 253
+AC L M Y +IL+ G+ +++ N L+ + ++G + AR VFDE
Sbjct: 114 KACAGLFDAEMGDL-------VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE 166
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALI-------- 305
+P R L VS+N+LISGY G EE + +++ I PD FT S+++
Sbjct: 167 MPVRDL----VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 306 ----NGL-----------------------CKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
GL K R +A +FDEM R + V++ T
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNT 278
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
+I G K V+ +++ F LDQ +PDL+T ++++ + DL A+ + N M G
Sbjct: 279 MICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ L+D K GDM +A ++ M
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES-ERIFPDVFTFSALI 305
AR VFDE+ R VS+NT+I GY K VEE R+ +E+ ++ PD+ T S+++
Sbjct: 261 ARRVFDEMDVRD----SVSYNTMICGYLKLEMVEESVRM--FLENLDQFKPDLLTVSSVL 314
Query: 306 NGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
A ++++ M + G V LID K G + A F M +
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK--- 371
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
D V++N++I+G + GDL EA KL M + D IT+ L+ + D++ +
Sbjct: 372 -DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 426 KKRMVEEGIELD 437
++ GI +D
Sbjct: 431 HSNGIKSGICID 442
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
LRAC +L + + Y +L+ G+ + + N+L+ + K GD+ +AR VF+
Sbjct: 314 LRACGHL-------RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEG---FRLKGVMESERIFPDVFTFSALINGLC 309
+ + VS+N++ISGY +SG++ E F++ +ME + D T+ LI+
Sbjct: 367 SMECKD----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ---ADHITYLMLISVST 419
Query: 310 KESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV 369
+ + L + G+ + LID K G+V +LK F M D V
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTV 475
Query: 370 TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
T+N +I+ + GD ++ +M + PD TF + C
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N LI Y K G +E R+ M DV T++ +I ++A F +M +
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLK 385
G+VP+ V F +I G VD L F+ M I P + Y +++ L + +
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+A + + M +KPD + +++ C GDME+A + +R++E
Sbjct: 664 KAEEFIQAMP---IKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N L+ + K G++ + +F + V++NT+IS + G+ G ++ M
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
+ PD+ TF + + + + R G LI+ K G ++
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
+ + F+ M R D+VT+ +I G+ ++A + +M G+ PD + F ++
Sbjct: 563 SSRVFERM----SRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 412 GCCKDGDMESALEIKKRM 429
C G ++ L ++M
Sbjct: 619 ACSHSGLVDEGLACFEKM 636
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIP--------LRACENLLRYM 203
MP + V+ + ++SA++ + ++A+ + + +P L AC NL R
Sbjct: 224 MP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 204 MKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTV 263
E + +++ G V + + L+ + K G +R AR VF+ + K+
Sbjct: 283 -------QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NS 331
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
VS++ L+ GYC++G E+ + ME + D++ F ++ + + +
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
RRG N + + LID K G +D A + + M IR +++T+NA+++ L + G
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM---SIR-NMITWNAMLSALAQNGR 443
Query: 384 LKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
+EA N+M +G+KPD I+F ++ C G MV+EG
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG-----------MVDEG 482
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 85/150 (56%), Gaps = 10/150 (6%)
Query: 289 MESERIF-----PDVFTFSALINGLCKESRSDEANHLFDEMCR-RGLVPNGVTFTTLIDG 342
+++ R+F PDV ++A+++ K +EA LF M R +GLVP+G TF T++
Sbjct: 215 VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
++ + ++ GI ++V ++L++ K G ++EAR++ N M+ K +
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS----KKN 330
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEE 432
++++ L+ G C++G+ E A+EI + M E+
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEK 360
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E Y E++E P V ++ VL++ F G+++ A + + + + V +N+LI Y
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 274 CKSGNVEEGFRL-KGVMES--ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
K G ++E + + +++S + +PDV+T + +IN + S +A +FD M +RG
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-E 714
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
N TF ++ K+G+ + A + + M + I D ++YN+++ G KEA +
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESAL----EIKKRMVEEGIEL 436
EM + G++PD TF +L K G + A+ EI+K+ ++ G+EL
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLEL 824
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 213 WEFYLEILE------CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
WE +EI E C Y V +N+++ K R + ++DE+ ++ ++P ++
Sbjct: 167 WERAVEIFEWFKSKGC-YELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-C 325
TLI Y K G G M + PD T ++ K +A F + C
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 326 RRGLVPNGV-----TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
+ V T+ T+ID K G++ A + F+ ML++GI P VT+N +I+
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
G L E L+ M PD T+ L+ K+ D+E A K M ++G++ D V+
Sbjct: 346 NGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 441 F 441
+
Sbjct: 405 Y 405
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 126/275 (45%), Gaps = 10/275 (3%)
Query: 161 FDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL 220
+ L+ A++ +++A I + N++I L R ++ + SW ++
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH 464
Query: 221 ECG-YPPKVYLFNVLMHGFCKVGDIRSARLVF---DEIPKRKLRPTVVSFNTLISGYCKS 276
G + Y N+ +G + G + A VF E+ KR TV+ +N +I Y S
Sbjct: 465 VAGNMSSEGYSANIDAYG--ERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGIS 518
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
+ E+ L M S + PD T++ L+ L + ++M G V + + +
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+I K G++++A + ++ M++ I PD+V Y LIN G++++A + M
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKE 638
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
G+ + + + +L+ K G ++ A I +++++
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+V+ VLI+A+ D+G + A+ + +++ + +L++ KV + Y
Sbjct: 610 VVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYR 669
Query: 218 EILE-CGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
++L+ C P VY N +++ + + +R A +FD + +R +F ++ Y
Sbjct: 670 KLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYK 728
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K+G EE ++ M +I D ++++++ + R EA F EM G+ P+
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDS 788
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGD 383
TF +L K G A++K + + + I+ L + + ++ L +GD
Sbjct: 789 TFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 23/294 (7%)
Query: 161 FDVLISAYTDSGFMDDAVQ---CIRLVRKKNLQIPLRACENLLRYMMKVKPPGPS----- 212
+ I AY + G++ +A + C + V K+ + + Y + +K G S
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRTV----------IEYNVMIKAYGISKSCEK 523
Query: 213 -WEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
E + ++ G P +N L+ R +++ + + + +IS
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
+ K G + + M I PDV + LIN +A + M G+
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIML---DQGIRPDLVTYNALINGLCKVGDLKEAR 388
N V + +LI K G +D A ++ +L ++ PD+ T N +IN + +++A
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ + M RG + ++ TF ++ K+G E A +I K+M E I D +++
Sbjct: 704 AIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYN 756
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 120/318 (37%), Gaps = 34/318 (10%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
S ++ +I Y SG + +A + + + ++ + +P N + ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI-VPTTVTFNTMIHIYGNNGQLGEVTSL 355
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
++ ++ P +N+L+ K DI A F E+ L+P VS+ TL+ +
Sbjct: 356 MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLF--------------- 321
VEE L M+ + + D +T SAL + +++ F
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 322 ---DEMCRRGLVPNG---------------VTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
D RG + + + +I + A + F+ M+ G
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ PD TYN L+ L + R L +M G D I + ++ K G + A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 424 EIKKRMVEEGIELDAVAF 441
E+ K MVE IE D V +
Sbjct: 596 EVYKEMVEYNIEPDVVVY 613
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 10/187 (5%)
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIF--------PDVFTFSALINGLCKESRSD 315
V+ N GY S N++ + E+ER+F V ++ +I +
Sbjct: 465 VAGNMSSEGY--SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCE 522
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
+A LF+ M G+ P+ T+ TL+ + M + G D + Y A+I
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ K+G L A ++ EM ++PD + + L++ G+++ A+ + M E GI
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 436 LDAVAFT 442
++V +
Sbjct: 643 GNSVIYN 649
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 247 ARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALIN 306
A V + P+ + V++N +I + G++ L M+ ++PDV T++++IN
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 307 GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM--LDQG- 363
G C + D+A L EM + V N VT++ +++G CK G ++ AL+ M D G
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 364 -IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
I P+ VTY +I C+ ++EA +L+ M RG P+++T L+ G ++ + A
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKA 328
Query: 423 LEIKKRMVEEGIELDAVAFT 442
L +++++ ++L V+ +
Sbjct: 329 L---SKLIDKLVKLGGVSLS 345
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 42/256 (16%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G P V + +++G+C G I A + E+ K V+++ ++ G CKSG++E
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 283 FRLKGVMESER----IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT--- 335
L ME E I P+ T++ +I C++ R +EA + D M RG +PN VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 336 --------------FTTLIDGQCKDGKVDL-------------------ALKKFQIMLDQ 362
+ LID K G V L A K F++ML +
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 363 GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP--DKITFTTLMDGCCKDGDME 420
G+RPD + + + LC + + L E+ + +K D L+ G C+ G+
Sbjct: 375 GVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSW 434
Query: 421 SALEIKKRMVEEGIEL 436
A ++ K M+++ + L
Sbjct: 435 EAAKLAKSMLDKKMRL 450
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+++ F GD+ A ++ E+ L P V+++ ++I+GYC +G +++ +RL M
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR---GLV-PNGVTFTTLIDGQCKD 346
+ T+S ++ G+CK + A L EM + GL+ PN VT+T +I C+
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 347 GKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG-DLKEARKLLNEMNARGLKPDKIT 405
+V+ AL M ++G P+ VT LI G+ + D+K KL++++ G
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSEC 347
Query: 406 FTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVA 440
F++ + E A +I + M+ G+ D +A
Sbjct: 348 FSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLA 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 285 LKGVMES---ERIFPDVFTFSALINGLCKESR-SDEANHLFDEMCRRGLVPNGVTFTTLI 340
+K V+ES E F +V T ++ LC ++ +DEA + + + + V + +I
Sbjct: 114 IKYVIESYRKEECFVNVKTMRIVLT-LCNQANLADEALWVLRKFPEFNVCADTVAYNLVI 172
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
G +++A + M G+ PD++TY ++ING C G + +A +L EM+
Sbjct: 173 RLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCV 232
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEG----IELDAVAFTM 443
+ +T++ +++G CK GDME ALE+ M +E I +AV +T+
Sbjct: 233 LNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 22/222 (9%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I++ G+ N ++ + G + +AR V+DE+P + VS NT+ISG+ K+G+
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHK----NTVSTNTMISGHVKTGD 94
Query: 279 VEEGFRLKGVMESERIFPD--VFTFSALINGLCKESRSDEANHLFDEMCRRG--LVPNGV 334
V L M PD V T++ L+ + S DEA LF +MCR +P+ V
Sbjct: 95 VSSARDLFDAM------PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 335 TFTTLIDGQCKDGKVDLALKK---FQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
TFTTL+ G C D A+ + F + L P L N L+ C+V L A L
Sbjct: 149 TFTTLLPG-CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
E+ + D +TF TL+ G KDG ++ + +M + G
Sbjct: 208 EEIPEK----DSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
+++ N L+ + K A L+F +P+R T VS+ LISGY + G G +L
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQR----TTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M + D TF+ ++ + L + R G + N + + L+D K G
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+ A++ F+ M D+ + V++NALI+ GD + A +M GL+PD ++
Sbjct: 502 SIKDAVQVFEEMPDR----NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 408 TLMDGCCKDGDMESALEIKKRM 429
++ C G +E E + M
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAM 579
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 44/266 (16%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+++P Q++ + + LIS Y G ++ +R NL+ +L+
Sbjct: 409 FKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + I+ G V+ + L+ + K G I+ A VF+E+P R VS+N
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR----NAVSWNA 523
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LIS + +G+ E A I K M G
Sbjct: 524 LISAHADNGDGE----------------------AAIGAFAK-------------MIESG 548
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD-QGIRPDLVTYNALINGLCKVGDLKEA 387
L P+ V+ ++ G V+ + FQ M GI P Y +++ L + G EA
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 388 RKLLNEMNARGLKPDKITFTTLMDGC 413
KL++EM +PD+I ++++++ C
Sbjct: 609 EKLMDEM---PFEPDEIMWSSVLNAC 631
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 17/275 (6%)
Query: 140 SASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIR-LVRKKNLQIPLRAC-E 197
SA LF MP ++V+ + +L+ Y + D+A + R + R + +P
Sbjct: 97 SARDLF----DAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYP--PKVYLFNVLMHGFCKVGDIRSARLVFDEIP 255
LL P + + ++ G+ P + + NVL+ +C+V + A ++F+EIP
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
++ V+FNTLI+GY K G E L M P FTFS ++ +
Sbjct: 212 EKD----SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
L G + ++D K +V + +++ D+ D V+YN +I
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV----LETRMLFDEMPELDFVSYNVVI 323
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLM 410
+ + + + EM G F T++
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 16/251 (6%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEIL--- 220
+I+ + G ++A L + K +P R L+ + K + F E+L
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCK---NDGTITFAQEMLGDL 363
Query: 221 -----ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
G P F+ ++H C++ +++ A+ + ++ + P FN ++ K
Sbjct: 364 SGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK 419
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
+G+++E + +MES + PDV+T++ +I+G K DEA + E ++ + VT
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVT 479
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC-KVGDLKEARKLLNEM 394
+ LI G CK + D ALK M G++P+ YN LI C K D ++A L EM
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Query: 395 NARGLKPDKIT 405
+GL + I+
Sbjct: 540 KQKGLHLNAIS 550
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 6/280 (2%)
Query: 165 ISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY--LEILEC 222
+ A FMD A + K + N++ + K ++ Y + E
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEK 332
Query: 223 GYPPKVYLFNVLMHGFCKV-GDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEE 281
PP+ L+ CK G I A+ + ++ R + F+ +I C+ NV++
Sbjct: 333 SLPPR--FVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKD 390
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
L M S+ P F+ +++ K DEA + M RGL P+ T+T +I
Sbjct: 391 AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS 450
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
G K G +D A + + + VTY+ALI G CK+ + EA KLLNEM+ G++P
Sbjct: 451 GYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQP 510
Query: 402 DKITFTTLMDG-CCKDGDMESALEIKKRMVEEGIELDAVA 440
+ + L+ C K D E A + + M ++G+ L+A++
Sbjct: 511 NADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 17/283 (6%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ-----IPLRACENLLRYMMKVKP 208
T + LV +L++ +D+ MD A LV++ + + L L+ K+
Sbjct: 188 TVTTSLVESLLVAIASDTRRMD-AYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGK 246
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+++ + + E G+ P + + + CK + A V +++ K +
Sbjct: 247 SKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGN 306
Query: 269 LISGYCKSGNVEEGFRLKGVMES-ERIFPDVFTFSALINGLCKESRS-----DEANHLFD 322
+I+ +CK G EE + + + ++ E+ P F + LI LCK + + L
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV-ATLITALCKNDGTITFAQEMLGDLSG 365
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
E RRG+ P F+ +I C+ V A M+ +G P +N +++ K G
Sbjct: 366 EARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
DL EA+++L M +RGLKPD T+T ++ G K G M+ A EI
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 9/237 (3%)
Query: 213 WEFYLEILE---CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
W+ EI E CG + + N L+ F K+G ++A VF + + P ++
Sbjct: 214 WDLVKEIGEKESCGVL-NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 270 ISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD--EMCRR 327
+ CK ++ + M + + +I CKE +++EA +++ + +
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEK 332
Query: 328 GLVPNGVTFTTLIDGQCK-DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
L P V TLI CK DG + A + + + R + ++ +I+ LC++ ++K+
Sbjct: 333 SLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKD 390
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
A+ LL +M ++G P F ++ C K GD++ A E+ K M G++ D +T+
Sbjct: 391 AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTV 447
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V +NVL+ G K +I AR +FD +P R L VS+N+LISGY + + E +L
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDL----VSWNSLISGYAQMNHCREAIKLFD 238
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M + + PD + ++ + + + D R+ L + T L+D K G
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCG 298
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
+D A++ F++ D+ L T+NA+I GL G+ + +M + G+KPD +TF
Sbjct: 299 FIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 408 TLMDGCCKDGDMESALEIKKRM 429
+++ GC G ++ A + +M
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQM 376
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N L+ G+ ++ R A +FDE+ L+P V+ + +S +SG+ ++G + +
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTK 276
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+R+F D F + L++ K D A +F E+C + T+ +I G G +
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIF-ELCSDKTL---FTWNAMITGLAMHGNGE 332
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA-RGLKPDKITFTTL 409
L + F+ M+ GI+PD VT+ +++ G G + EAR L ++M + + + + +
Sbjct: 333 LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
Query: 410 MDGCCKDGDMESALEIKKRMVEEG 433
D + G +E A E+ ++M ++G
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDG 416
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 294 IFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLAL 353
+ D+FT + LI + D A LFDE +R +V T+ LIDG K ++ A
Sbjct: 148 LLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV----TYNVLIDGLVKAREIVRAR 203
Query: 354 KKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+ F M + DLV++N+LI+G ++ +EA KL +EM A GLKPD + + + C
Sbjct: 204 ELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSAC 259
Query: 414 CKDGDMESALEI 425
+ GD + I
Sbjct: 260 AQSGDWQKGKAI 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ + L G ++ N L+ + + I SA +FDE P+R VV++N LI G
Sbjct: 139 LHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRD----VVTYNVLIDGLV 194
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
K+ E R + + +S + D+ ++++LI+G + + EA LFDEM GL P+ V
Sbjct: 195 KA---REIVRARELFDSMPL-RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNV 250
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL----CKVGDLKEARKL 390
+ + + G +K + + D R L + L GL K G + A ++
Sbjct: 251 AIVSTLSACAQSGD----WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 391 LNEMNARGLKPDKITFT--TLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
L DK FT ++ G G+ E ++ ++MV GI+ D V F
Sbjct: 307 FE------LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF 353
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 219 ILECGYPPK-VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+LE P + V L+NV M F K D+ + +FDE+ +R ++P +F T+IS ++G
Sbjct: 165 LLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNG 224
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
+ M S PD T +A+I+ + D A L+D + VTF+
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFS 284
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TLI G D L ++ M G++P+LV YN LI+ + + +A+ + ++
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
G P+ T+ L+ + + AL I + M E+G+ L + +
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYN 389
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ F LI Y SG D + ++ ++ L L+ M + K P + Y
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK 339
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+++ G+ P + L+ + + A ++ E+ ++ L TV+ +NTL+S +
Sbjct: 340 DLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNR 399
Query: 278 NVEEGFRLKGVMES-ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
V+E F + M++ E PD +TFS+LI R EA +M G P
Sbjct: 400 YVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVL 459
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
T++I K +VD ++ F +L+ GI PD
Sbjct: 460 TSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L ++E+ + +V ++ + K +++ LFDEM RG+ P+ TFTT+I
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
++G A++ F+ M G PD VT A+I+ + G++ A L + + D +
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
TF+TL+ G+ + L I + M G++ + V +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 48/258 (18%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ +++ G +++ N L+H + D SAR +FDE+P + L V++N+++ Y
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL----VTWNSILDAYA 185
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV-PNG 333
KSG+V RL SER DV T+S++I+G K ++A +FD+M R G N
Sbjct: 186 KSGDVVSA-RLVFDEMSER---DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 334 VTF-----------------------------------TTLIDGQCKDGKVDLALKKFQI 358
VT T+LID K G + A + +
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA---WSV 298
Query: 359 MLDQGIR-PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
++ D + +NA+I GL G ++E+ +L ++M + PD+ITF L+ C G
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Query: 418 DMESALEIKKRMVEEGIE 435
++ A K + E G E
Sbjct: 359 LVKEAWHFFKSLKESGAE 376
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 23/310 (7%)
Query: 127 SLLCFLVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRK 186
+L+ S + SA LF MP ++++ ++ ++ AY SG D V RLV
Sbjct: 148 TLIHMYGSFRDQASARKLF----DEMP-HKNLVTWNSILDAYAKSG---DVVSA-RLVFD 198
Query: 187 KNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPP--KVYLFNVLMHGFCKVGDI 244
+ + + +++ +K + E + +++ G +V + +V+ +G +
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVIC-ACAHLGAL 257
Query: 245 RSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG---FRLKGVMESERIFPDVFTF 301
+ V I L TV+ +LI Y K G++ + F V E+ D +
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET-----DALMW 312
Query: 302 SALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD 361
+A+I GL E+ LF +M + P+ +TF L+ G V A F+ + +
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE 372
Query: 362 QGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMES 421
G P Y +++ L + G +K+A ++EM +KP L++GC G++E
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP---IKPTGSMLGALLNGCINHGNLEL 429
Query: 422 ALEIKKRMVE 431
A + K+++E
Sbjct: 430 AETVGKKLIE 439
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
PP Y +N ++ GF + + V+ ++ + L P +++ L+ + N + G
Sbjct: 71 PPN-YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGS 129
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L + + D+F + LI+ A LFDEM + L VT+ +++D
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL----VTWNSILDAYA 185
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG-LKPDK 403
K G V A +++ D+ D+VT++++I+G K G+ +A ++ ++M G K ++
Sbjct: 186 KSGDVVSA----RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
+T +++ C G + + + +++ + L +
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVI 277
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGP 211
MP + F L++ Y A+ R++RK + + + + L + +
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG 245
Query: 212 SWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
+ ++ ++ G ++L L+ + K G I SAR +FD +R VV++N +I
Sbjct: 246 AESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD----CAIRKDVVTWNCMID 301
Query: 272 GYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVP 331
Y K+G +EE L M+ E++ P+ TF L++ + + D + +
Sbjct: 302 QYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIAL 361
Query: 332 NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLL 391
+ + T L+D K G ++ A++ F M D+ D+ ++ A+I+G G +EA L
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDK----DVKSWTAMISGYGAHGLAREAVTLF 417
Query: 392 NEMNARG--LKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
N+M ++P++ITF +++ C G + + KRMVE
Sbjct: 418 NKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 27/308 (8%)
Query: 145 FASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI-------PLRACE 197
+AS + + ++ +F+ +I Y+ S + A +R K L + L++C
Sbjct: 77 YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCS 136
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
L + G + L G+ L N L+H +C G I AR VFDE+P+
Sbjct: 137 RELCVSIGEGLHGIA-------LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS 189
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFT---FSALINGLCKESRS 314
V+F+TL++GY + L +M + +V T F + I+ L S +
Sbjct: 190 ---VDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 315 DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNAL 374
+ A+ L ++ GL + T LI K G + A + F D IR D+VT+N +
Sbjct: 247 ESAHVLCIKI---GLDLDLHLITALIGMYGKTGGISSARRIF----DCAIRKDVVTWNCM 299
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
I+ K G L+E LL +M +KP+ TF L+ C + + EE I
Sbjct: 300 IDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERI 359
Query: 435 ELDAVAFT 442
LDA+ T
Sbjct: 360 ALDAILGT 367
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 17/277 (6%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
Q +V+ + LIS + ++ DA++ R ++ ++ +LL + K
Sbjct: 170 QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKW 229
Query: 215 FYLEILECGYPP--------KVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSF 266
F+ + G+ P V L L+ + K GD+R+AR +FD +P+R T+VS+
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSW 285
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N++I+GY ++G+ EE + M I PD TF ++I + S + + +
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSK 345
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
G V + L++ K G + A K F+ + + D + + +I GL G E
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE----KKDTIAWTVVIIGLASHGHGNE 401
Query: 387 ARKLLNEMNARG-LKPDKITFTTLMDGCCKDGDMESA 422
A + M +G PD IT+ ++ C G +E
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 438
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 26/246 (10%)
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
P + FY E+L GY P + F ++ + DI+ V + K +
Sbjct: 88 PDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC 147
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPD-----VFTFSALINGLCKESRSDEANHLFDE 323
L+ Y G V G R+F D V + +LI+G +R +A F E
Sbjct: 148 LLHMYMCCGEVNYGL---------RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 324 MCRRGLVPNGVTFTTLID--GQCKD---GKVDLALKK---FQIMLDQGIRPDLVTYNALI 375
M G+ N L+ G+CKD GK + F + +++ +LI
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ K GDL+ AR L + M R L +++ +++ G ++GD E AL + M++ GI
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTL----VSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 436 LDAVAF 441
D V F
Sbjct: 315 PDKVTF 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 138/364 (37%), Gaps = 108/364 (29%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ-------IPLRACENLLRYMMKVKPP 209
SV +++ +I Y++S D A+ + + +K L+AC L
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 210 GPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTL 269
G +++ G+ +Y+ L+H + G++ VF++IP+ VV++ +L
Sbjct: 131 GF-------VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW----NVVAWGSL 179
Query: 270 ISGYCKSGNVE---EGFR---LKGVMESERIFPDVFT-------------FSALINGL-- 308
ISG+ + E FR GV +E I D+ F + GL
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 309 ------------------------CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
C + R+ A +LFD M R LV ++ ++I G
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRT--ARYLFDGMPERTLV----SWNSIITGYS 293
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTY--------------------------------- 371
++G + AL F MLD GI PD VT+
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA 353
Query: 372 --NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
AL+N K GD + A+K ++ K D I +T ++ G G AL I +RM
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLE----KKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
Query: 430 VEEG 433
E+G
Sbjct: 410 QEKG 413
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 230 LFNVLMHGFCKVGDIRSARLV--FDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
L++ L+ CK D ++ +++ K + P + + ++ + G +E +
Sbjct: 216 LYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLN 275
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M+ +R+ PD+ ++ ++ G+ + +A+ LFDE+ GL P+ T+ I+G CK
Sbjct: 276 QMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQN 335
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++ ALK M G P++VTYN LI L K GDL A+ L EM G+ + TF
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 395
Query: 408 TLMDG-------CCKDGDMESALE----IKKRMVEEGI 434
++ C G +E A +K +EE I
Sbjct: 396 IMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVI 433
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 19/295 (6%)
Query: 160 VFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC----ENLLRYMMKVKPPGPSWEF 215
+F +I+AY SG +++A++ +IP C L ++ + S E
Sbjct: 110 IFRDVIAAYGFSGRIEEAIEVF-------FKIPNFRCVPSAYTLNALLLVLVRKRQSLEL 162
Query: 216 YLEIL----ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLIS 271
EIL G + F +L+ C++G++ A + + + + ++ L+S
Sbjct: 163 VPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLS 222
Query: 272 GYCKSGNVEEGFRLKGVMES---ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
CK + F + G +E R P + ++ ++ L + R E + ++M
Sbjct: 223 SVCKHKD-SSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDR 281
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P+ V +T ++ G D A K F +L G+ PD+ TYN INGLCK D++ A
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
K+++ MN G +P+ +T+ L+ K GD+ A + K M G+ ++ F +
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 144 LFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYM 203
L++ L ++ + FDV+ G+++D +RK LR ++R++
Sbjct: 216 LYSRLLSSVCKHKDSSCFDVI-------GYLED-------LRKTRFSPGLRDYTVVMRFL 261
Query: 204 MKVKPPGPSWEFYLEILECG-YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPT 262
++ G L ++C P + + +++ G D A +FDE+ L P
Sbjct: 262 VE-GGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 263 VVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFD 322
V ++N I+G CK ++E ++ M P+V T++ LI L K A L+
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
EM G+ N TF +I + +V A + + + +I+ LC+ G
Sbjct: 381 EMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKG 440
Query: 383 DLKEARKLLNEM 394
+ +A +LL +
Sbjct: 441 LMDQAVELLAHL 452
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 4/261 (1%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
V+I A +G+ +++ R + K L++ +LL+ + + +L+
Sbjct: 87 VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
Y ++ + L+ + K G++ +AR VF ++ ++ L V FN +ISGY + +E
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL----VVFNAMISGYANNSQADEA 202
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
L M+ I PDV T++ALI+G ++ + + + MC G P+ V++T++I G
Sbjct: 203 LNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISG 262
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
+ + + A F+ ML G+ P+ T L+ + +K +++ GL+
Sbjct: 263 LVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDH 322
Query: 403 KITFTTLMDGCCKDGDMESAL 423
+ L+D K G + A+
Sbjct: 323 GFVRSALLDMYGKCGFISEAM 343
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI-SGYC-----------KSGNVEEGFRL 285
+ + G + AR VFDE+PKR + VV +GY K G + F +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 286 KGVMESERIF-------------------PDVFTFSALINGLCKESRSDEANHLFDEMCR 326
++++ R D F S+LI+ K A +F ++
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKE 386
+ LV F +I G + + D AL + M GI+PD++T+NALI+G + + ++
Sbjct: 181 QDLV----VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
++L M G KPD +++T+++ G + E A + K+M+ G+
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 74/342 (21%)
Query: 139 GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACEN 198
G+A +F+ +Q ++VF+ +IS Y ++ D+A+ ++ ++
Sbjct: 169 GNARKVFSDL-----GEQDLVVFNAMISGYANNSQADEALNLVKDMK------------- 210
Query: 199 LLRYMMKVKPPGPSWEFYL-------------EILEC----GYPPKVYLFNVLMHGFCKV 241
++ +KP +W + EILE GY P V + ++ G
Sbjct: 211 ----LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 242 GDIRSARLVFDEIPKRKLRPTVVSFNTL---------------ISGYCKSGNVEE-GFRL 285
A F ++ L P + TL I GY +E+ GF
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 286 KGVME--------SERIF-------PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
+++ SE + TF+++I +D+A LFD+M G
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARK 389
+ +TFT ++ G DL F +M ++ I P L Y +++ L + G L EA +
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYE 446
Query: 390 LLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
++ M ++PD + L+ C G+ME A K + E
Sbjct: 447 MIKAMR---MEPDLFVWGALLAACRNHGNMELARIAAKHLAE 485
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW----EFYLEI 219
+IS + + G++ +A+ + L E+ L ++ V PS E +
Sbjct: 522 MISGFNEYGYLREAIGLF----SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L G + L + L++ + K G ++ AR V+D +P+ L P VS ++LISGY + G +
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE--LDP--VSCSSLISGYSQHGLI 633
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++GF L M D F S+++ S + + + GL ++L
Sbjct: 634 QDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSL 693
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ K G +D K F Q PDL+ + ALI + G EA ++ N M +G
Sbjct: 694 LTMYSKFGSIDDCCKAFS----QINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEE-GIE 435
KPDK+TF ++ C G +E + MV++ GIE
Sbjct: 750 KPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
P+V S +L++ Y K G++++ + + PD+ ++ALI + +++EA
Sbjct: 686 EPSVGS--SLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQ 739
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGL 378
+++ M +G P+ VTF ++ G V+ + M+ D GI P+ Y +++ L
Sbjct: 740 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDAL 799
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+ G L+EA +N M+ +KPD + + TL+ C G++E K+ +E
Sbjct: 800 GRSGRLREAESFINNMH---IKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++CG V++ ++ + K G + A VF IP P+VVS+ ++SGY KS +
Sbjct: 277 VIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN----PSVVSWTVMLSGYTKSND 331
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+ M + + T +++I+ + S EA+ + + + G +
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
LI K G +DL+ + F+ LD R ++V N +I + +A +L M G
Sbjct: 392 LISMYSKSGDIDLSEQVFED-LDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 399 LKPDKITFTTLM 410
L+ D+ + +L+
Sbjct: 449 LRTDEFSVCSLL 460
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 14/281 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
SV+ + V++S YT S A++ + +R ++I +++ + + + +
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ + G+ + L+ + K GDI + VF+++ + R +V N +I+ + +S
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ-RQNIV--NVMITSFSQS 431
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGL-CKESRSDEANHLFDEMCRRGLVPNGVT 335
+ RL M E + D F+ +L++ L C + + + GLV +
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL----NLGKQVHGYTLKSGLVLDLTV 487
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGI-RPDLVTYNALINGLCKVGDLKEARKLLNEM 394
++L K G ++ + K FQ GI D + ++I+G + G L+EA L +EM
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQ-----GIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
G PD+ T ++ C + EI + GI+
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID 583
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P V+L L+ + G + A +FD IP+ P VVS N +ISGY + EE R
Sbjct: 81 PFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQ----PDVVSCNIMISGYKQHRLFEESLR 136
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF-----TTL 339
M + ++ ++I+ C ++ LF E+ + G F + L
Sbjct: 137 FFSKMHFLGFEANEISYGSVISA-CSALQAP----LFSELVCCHTIKMGYFFYEVVESAL 191
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
ID K+ + + A K F+ + ++ +N +I G + + L +EM
Sbjct: 192 IDVFSKNLRFEDAYKVFR----DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
KPD T+++++ C + ++ R+++ G E
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE 283
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
I++ G K+ + N L+ + K G I A L+F+ R LR ++S+N +ISG+ +G
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFE----RSLRKNLISWNAIISGFYHNGF 467
Query: 279 VEEGF-RLKGVMESE-RIFPDVFTFSALINGLCKESRS---DEANHLFDEMCRRGLVPNG 333
EG R ++ESE RI PD +T S L++ +C + S H + + R G
Sbjct: 468 PFEGLERFSCLLESEVRILPDAYTLSTLLS-ICVSTSSLMLGSQTHAY--VLRHGQFKET 524
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+ LI+ + G + +L+ F M ++ D+V++N+LI+ + G+ + A
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMSEK----DVVSWNSLISAYSRHGEGENAVNTYKT 580
Query: 394 MNARG-LKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
M G + PD TF+ ++ C G +E LEI MVE
Sbjct: 581 MQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
P VY + L+ K+GDI A VFD++P+ R V +N +I+G +SG E
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVE 176
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQC 344
L M + D F F+ +++ +C D + + + G LI
Sbjct: 177 LFREMHKLGVRHDKFGFATILS-MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
V A F+ D +R D VT+N +I+GL E+ + +M L+P +
Sbjct: 236 NCQVVVDACLVFE-ETDVAVR-DQVTFNVVIDGLAGF-KRDESLLVFRKMLEASLRPTDL 292
Query: 405 TFTTLMDGC 413
TF ++M C
Sbjct: 293 TFVSVMGSC 301
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
GY V N + CK + A+ VF ++ K ++P +++ T+I G+C G++ E
Sbjct: 176 GYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEA 234
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMC-RRGLVPNGVTFTTLID 341
+L +M E D+ ++ L K+++ DEA+ +F M +RG +G + +ID
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 342 GQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
CK+G++D+A K F M ++G+ D +T+ +LI GL + EA L+ + P
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE----NP 350
Query: 402 DKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
D + L+ G K A E+ ++M++ G E
Sbjct: 351 DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCE 384
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP-PGPSWEFYL 217
+ + +I + D G + +A + L+ + + + A + ++ ++K S FY+
Sbjct: 216 ITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYV 275
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ + G + V++ CK G I AR VFDE+ +R + +++ +LI G
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
V E + L +E+ PD+ + LI GL K R+ EA +F +M +RG P T+
Sbjct: 336 RVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYL 391
Query: 338 TLIDGQC-KDGKVDLALKKFQIMLDQGIRPDLVTYNAL-INGLCKVGDLKEARKLLNEMN 395
L+ G + G+ +G P LV ++ + + G+ K G E K +
Sbjct: 392 MLLQGHLGRRGR-------------KGPDP-LVNFDTIFVGGMIKAGKRLETTKYIERTL 437
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
RGL+ + ++ + + + E+ K++ E
Sbjct: 438 KRGLEVPRFDYSKFLHYYSNEEGVVMFEEMAKKLRE 473
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 297 DVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKF 356
+V T + + LCKE +EA +F ++ + + P+ +T+ T+I G C G + A K +
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 357 QIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM-NARGLKPDKITFTTLMDGCCK 415
+M+D+G D+ ++ L K EA K+ M + RG D + ++D CK
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 416 DGDMESALEIKKRMVEEGIELDAVAF 441
+G ++ A ++ M E G+ +D + +
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTW 324
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
TF ++ L + + F M G + N T ++ CK+ V+ A F I
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVF-IK 206
Query: 360 LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDM 419
L + I+PD +TY +I G C VGDL EA KL N M G D +M+ K
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 420 ESALEIKKRMV-EEGIELDA 438
+ A ++ MV + G +LD
Sbjct: 267 DEASKVFYVMVSKRGGDLDG 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
L E+ +RGLV N TF ++ ++ + F +M G ++ T N + LC
Sbjct: 134 LAQEIGKRGLV-NDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLC 192
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
K ++EA+ + ++ +KPD+IT+ T++ G C GD+ A ++ M++EG ++D
Sbjct: 193 KEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 440 A 440
A
Sbjct: 252 A 252
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEI---PKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
+ +++++ +V SA +F E+ PKR+ VV +NT IS + NV E R+
Sbjct: 177 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 236
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
VM+ + T+S L++ + RS+ A ++DEM + +I K
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
+ K DLALK FQ ML +G++P+LV N LIN L K G + K+ + + + G KPD+ T
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 406 FTTLMDGCCKDGDMESALEI 425
+ L+ K E L++
Sbjct: 357 WNALLTALYKANRYEDVLQL 376
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 14/319 (4%)
Query: 140 SASSLFAS--FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
SA LF S FL P + F +S +G + A +RKK +
Sbjct: 125 SALELFDSMRFLGLQPNAHACNSF---LSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYS 180
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHG----FC-KVGDIRSARLVFD 252
+L+ + +VK + + E+ P + F+V+++ C ++ ++ ++
Sbjct: 181 LMLKAVAEVKGCESALRMFRELER--EPKRRSCFDVVLYNTAISLCGRINNVYETERIWR 238
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
+ T ++++ L+S + + G E + M + +I A+I+ KE
Sbjct: 239 VMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEE 298
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
+ D A +F M ++G+ PN V TLI+ K GKV L K + ++ G +PD T+N
Sbjct: 299 KWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWN 358
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGL-KPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
AL+ L K ++ +L + + + L ++ + T M C K G E A+++ M
Sbjct: 359 ALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEG 418
Query: 432 EGIELDAVAFTMEEVAMQK 450
G+ + ++ + A +K
Sbjct: 419 SGLTVSTSSYNLVISACEK 437
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 163 VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILEC 222
+ISA T D A++ + + KK ++ L AC L+ + K G ++ Y +
Sbjct: 289 AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL 348
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKL-RPTVVSFNTLISGYCKSGNVEE 281
G+ P Y +N L+ K +FD I L +NT + K G E+
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 282 GFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+L ME + +++ +I+ K +S A +++ M +R PN T+ +L+
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 342 GQCKDG----KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
C G +V+ LKK + PD+ YNA I+G+C + K A++L +M
Sbjct: 469 S-CIWGSLWDEVEDILKK--------VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREM 519
Query: 398 GLKPDKITFTTLMDG 412
GL+PD T ++
Sbjct: 520 GLEPDGKTRAMMLQN 534
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 250 VFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC 309
+F + K+ ++P +V+ NTLI+ K+G V F++ V++S PD +T++AL+ L
Sbjct: 306 IFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALY 365
Query: 310 KESRSDEANHLFDEMCRRGL-VPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDL 368
K +R ++ LFD + L N + T + K G + A+K M G+
Sbjct: 366 KANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVST 425
Query: 369 VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
+YN +I+ K K A + M R KP+ T+ +L+ C
Sbjct: 426 SSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC 470
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 148 FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVK 207
+TM +++ + + +++ Y+ +GF A++C R +R++ Q ++L V
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 208 PPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
+ + I++ G+ +Y+ + L+ + K ++ SAR + + + VVS+N
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV----DDVVSWN 297
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLC---KESRSDEANHLFDEM 324
++I G + G + E + G M + D FT +++N E + + H +
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL--I 355
Query: 325 CRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDL 384
+ G + L+D K G +D ALK F+ M+++ D++++ AL+ G G
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSY 411
Query: 385 KEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
EA KL M G+ PDKI +++ + +E ++ ++ G
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 108/305 (35%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKR-------------------------KLRP--TVV 264
N+L+ K G + AR +FD++P+R + P +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 265 SFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSA--------------------- 303
S+N LISGYCKSG+ E F L M+S+ I P+ +T +
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 304 ----------LINGL------CKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
++NGL CK R EA +LF+ M N VT+T+++ G ++G
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCK--RISEAEYLFETMEGE---KNNVTWTSMLTGYSQNG 206
Query: 348 KVDLALKKFQ-----------------------------------IMLDQGIRPDLVTYN 372
A++ F+ ++ G + ++ +
Sbjct: 207 FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQS 266
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEE 432
ALI+ K +++ AR LL M D +++ +++ GC + G + AL + RM E
Sbjct: 267 ALIDMYAKCREMESARALLEGMEV----DDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 433 GIELD 437
+++D
Sbjct: 323 DMKID 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 304 LINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQG 363
L+ L K R DEA +FD+M R + T+ T+I ++ A K F+
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFR----SN 85
Query: 364 IRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
+ +++NALI+G CK G EA L EM + G+KP++ T +++ C +
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 424 EIKKRMVEEGIELDAVAFTMEEVAMQKEC 452
+I ++ G +LD V +AM +C
Sbjct: 146 QIHGHTIKTGFDLD-VNVVNGLLAMYAQC 173
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR--KLRPTVVSFNTLISGYCKSGN 278
+ G P FN L++ + +FDEIP+R K+ P +S+ LI YC SG
Sbjct: 130 QYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGT 189
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
E+ + M+ + + F+ +++ L K+ + A++L++EM ++G + +
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
I K+ + + + M G++PD ++YN L+ C+ G L EA+K+ +
Sbjct: 250 RIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMV 430
P+ TF TL+ C E I K+ V
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
++ L+ + + A F+++ + + VSFN L++ S N ++ +L +
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 290 ESE--RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
+I PD ++ LI C ++A + +M +G+ + FTT++ K G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++++A + M+ +G D YN I K + ++L+ EM++ GLKPD I++
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYN 282
Query: 408 TLMDGCCKDGDMESALEIKKRMVEEGIE 435
LM C+ G ++ A + V EG+E
Sbjct: 283 YLMTAYCERGMLDEA-----KKVYEGLE 305
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 301 FSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML 360
+S LI + S + A F++M + G + V+F L++ D + F +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 361 DQ--GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ I PD ++Y LI C G ++A +++ +M +G++ I FTT++ K G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 419 MESALEIKKRMVEEGIELDAVAFTMEEVAMQKE 451
+E A + MV++G ELD A+ + ++ QKE
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKE 257
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 1/194 (0%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+ + +LI +Y DSG + A++ +R ++ K +++ A +L + K + + E
Sbjct: 175 ISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNE 234
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+++ G +NV + K R L+ +E+ L+P +S+N L++ YC+ G
Sbjct: 235 MVKKGCELDNAAYNVRIMSAQKESPERVKELI-EEMSSMGLKPDTISYNYLMTAYCERGM 293
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
++E ++ +E P+ TF LI LC ++ +F + +P+ T
Sbjct: 294 LDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKH 353
Query: 339 LIDGQCKDGKVDLA 352
L+ G ++ K D A
Sbjct: 354 LVVGLVENKKRDDA 367
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 13/268 (4%)
Query: 154 TQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSW 213
+ ++ + + +I+A+ GF ++A+ R++++++L ++LR V
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + +I++ VY+ + L+ +CK G+ R A V ++P R VVS+ +ISG
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD----VVSWTAMISGC 461
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG-LVPN 332
G+ E M E + P+ FT+S+ + C S S + ++ + N
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA-CANSESLLIGRSIHSIAKKNHALSN 520
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
+ LI K G V A + F M ++ +LV++ A+I G + G +EA KL+
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEK----NLVSWKAMIMGYARNGFCREALKLMY 576
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDME 420
M A G + D F T++ C GD+E
Sbjct: 577 RMEAEGFEVDDYIFATILSTC---GDIE 601
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFY 216
+++V L+ Y G + A++ ++ +K++ R +K G +
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG----MF 272
Query: 217 LEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKS 276
+ +L + P + ++ + +R R V + KR ++ V +L+ Y K
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 277 GNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTF 336
G + + ++ M + + T++++I +E +EA LF M RR L+ N +T
Sbjct: 333 GEISDCRKVFDGMSNR----NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTV 388
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+++ G + L + ++ I ++ + L+ CK G+ ++A +L ++ +
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
R D +++T ++ GC G AL+ K M++EG+E
Sbjct: 449 R----DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L+C +Y N L+ ++GD+ AR VFD +P++ V++ +I GY K G
Sbjct: 109 LKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEK----NTVTWTAMIDGYLKYGLE 164
Query: 280 EEGFRL-KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTT 338
+E F L + ++ F + F L+N + + + + M + G V N + ++
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESS 223
Query: 339 LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG 398
L+ + G++ AL+ F +M ++ D++++ A+I+ + G +A + M
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEK----DVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P++ T +++ C ++ + ++ +V+ I+ D T
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGT 323
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 50/238 (21%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ Y+ NV+M + K + SAR VFD+I +RK +N +ISGY K GN EE
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS----DWNVMISGYWKWGNKEEA 186
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
+L +M DV +++ +I G K + A FD M + +V ++ ++ G
Sbjct: 187 CKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNAMLSG 238
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTY------------------------------- 371
++G + AL+ F ML G+RP+ T+
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 372 ----NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
AL++ K D++ AR++ NE+ G + + +T+ ++ G + GDM SA ++
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQL 353
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 143/316 (45%), Gaps = 48/316 (15%)
Query: 148 FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQC--------------------------- 180
+ MP ++SV+ ++ ++S Y +GF +DA++
Sbjct: 220 YFDRMP-EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Query: 181 --------IRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFN 232
++L+ +K +++ LL K + + + E+ G + +N
Sbjct: 279 DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWN 335
Query: 233 VLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL-KGVMES 291
++ G+ ++GD+ SAR +FD +PKR VVS+N+LI+GY +G + +++
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 292 ERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
PD T ++++ + + + + D + + + N + +LI + G +
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWE 451
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + F M ++ D+V+YN L GD E LL++M G++PD++T+T+++
Sbjct: 452 AKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Query: 412 GCCKDGDMESALEIKK 427
C + G ++ I K
Sbjct: 508 ACNRAGLLKEGQRIFK 523
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 141/297 (47%), Gaps = 13/297 (4%)
Query: 139 GSASSLFASFLQTMPT-QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACE 197
GSA ++F + +P +++++ + ++SAY +G +A++ +RK +++ A
Sbjct: 171 GSARTVF----EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226
Query: 198 NLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKR 257
++L ++ + +++ G + L L + K G + +A+++FD++
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS- 285
Query: 258 KLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEA 317
P ++ +N +ISGY K+G E + M ++ + PD + ++ I+ + ++A
Sbjct: 286 ---PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
+++ + R + + LID K G V+ A +++ D+ + D+V ++A+I G
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA----RLVFDRTLDRDVVVWSAMIVG 398
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
G +EA L M G+ P+ +TF L+ C G + RM + I
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 5/210 (2%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P + L+N ++ G+ K G R A +F E+ + +RP +S + IS + G++E+ +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
+ DVF SALI+ K + A +FD R L + V ++ +I G
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD----RTLDRDVVVWSAMIVGYGL 401
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
G+ A+ ++ M G+ P+ VT+ L+ G ++E N M + P +
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 406 FTTLMDGCCKDGDMESALEIKKRM-VEEGI 434
+ ++D + G ++ A E+ K M V+ G+
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 68/293 (23%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ + +L G +L L+H GDI AR VFD++P RP + +N +I GY
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGY 94
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG----- 328
++ + ++ + M+ R+ PD FTF L+ S + ++ R G
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 329 LVPNG----------------------------VTFTTLIDGQCKDGKVDLALKKFQIML 360
V NG V++T ++ ++G+ AL+ F M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 361 DQGIRPDLVTYNALINGLCKVGDLKEARKL------------------LNEMNARGLK-- 400
++PD V +++N + DLK+ R + LN M A+ +
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 401 -----------PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
P+ I + ++ G K+G A+++ M+ + + D ++ T
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
+E G V + N L+ +CK ++ +A +F ++ R T+VS+N +I G+ ++G
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRP 419
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
+ M S + PD FT+ ++I + + S + A + + R L N T L
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+D K G + +A F +M ++ + T+NA+I+G G K A +L EM +
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHV----TTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEE-GIEL 436
KP+ +TF +++ C G +E+ L+ M E IEL
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
E + +++ G+ ++ L + + K + AR VFD +P+R L VS+NT+++GY
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL----VSWNTIVAGY 211
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
++G + M E + P T +++ + + R G
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
T L+D K G ++ A + F ML++ + V++N++I+ + + KEA + +
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNV----VSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
M G+KP ++ + C GD+E I K VE G++
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 107/241 (44%), Gaps = 43/241 (17%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
L++ ++ GF KV D+ A F + + P V +F L+ + G + G++
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 290 ESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKV 349
D+F + L N K + +EA +FD M R L V++ T++ G ++G
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL----VSWNTIVAGYSQNGMA 217
Query: 350 DLALKKFQIMLDQGIRPDLVTY-----------------------------------NAL 374
+AL+ + M ++ ++P +T AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 375 INGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
++ K G L+ AR+L + M L+ + +++ +++D ++ + + A+ I ++M++EG+
Sbjct: 278 VDMYAKCGSLETARQLFDGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 435 E 435
+
Sbjct: 334 K 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
L+S +C+ G+V+E R+ ++S+ +V + ++ G K S D+A F M
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSK---LNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
+ P FT L+ + ++ + + +++ G DL L N K + EAR
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
K+ + M R D +++ T++ G ++G ALE+ K M EE ++
Sbjct: 191 KVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 40/250 (16%)
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+I+ G+ VY+ N L+H + G I +A +F ++ R VVS+ ++++GYCK G
Sbjct: 142 QIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD----VVSWTSMVAGYCKCG 197
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
VE M E ++FT+S +ING K + ++A LF+ M R G+V N
Sbjct: 198 MVENARE----MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLV---------------------------- 369
++I G ++ + ++ ++ + +L+
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 370 ---TYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+++++I GL G +A ++M + G P +TFT ++ C G +E LEI
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 427 KRMVEE-GIE 435
+ M ++ GIE
Sbjct: 374 ENMKKDHGIE 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 241 VGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL-KGVMESERIFPDVF 299
+G + ++ + K + ++ L+ + + G++E+ + +G+ E+ D
Sbjct: 262 LGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET-----DSL 316
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM 359
++S++I GL + +A H F +M G +P VTFT ++ G V+ L+ ++ M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 360 -LDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGC 413
D GI P L Y +++ L + G L EA + +M+ +KP+ L+ C
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH---VKPNAPILGALLGAC 428
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 199 LLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
L+R P ++ FY ++L+ P F L+ ++ + +I +
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
+ V N+L+ Y G + R+ G M F DV ++++++ G CK + A
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMG----FRDVVSWTSMVAGYCKCGMVENAR 203
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
+FDEM R L T++ +I+G K+ + A+ F+ M +G+ + ++I+
Sbjct: 204 EMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
+G L+ + + + + I T L+D + GD+E A+ +
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 261 PTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHL 320
P + FN LI + + F M RI+PD TF LI +
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 321 FDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCK 380
++ R G + +L+ G + A + F M G R D+V++ +++ G CK
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFR-DVVSWTSMVAGYCK 195
Query: 381 VGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
G ++ AR++ +EM R L T++ +++G K+ E A+++ + M EG+
Sbjct: 196 CGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 66/286 (23%)
Query: 221 ECGYPPKVY-------------LFNVLMHGFCKVGDIRSARLVFDEIPKRK----LRPTV 263
+ GY KVY +N+L+ C G + A+ ++ E + + L+
Sbjct: 315 DLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDA 374
Query: 264 VSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE 323
++ T+I + + + ++K M+S + P+ T+S+LI+ ++ANHLF+E
Sbjct: 375 FTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEE 434
Query: 324 MCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ-------------------------- 357
M G PN F L+ + + D A + FQ
Sbjct: 435 MLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPN 494
Query: 358 IMLDQG---------------------IRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
I+ + G +P TYN L+ C D ++L++EM +
Sbjct: 495 ILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGT-DYYRGKELMDEMKS 552
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
GL P++IT++TL+D C GD+E A+ I + M G D VA+T
Sbjct: 553 LGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYT 598
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 52/274 (18%)
Query: 203 MMKVKPPGPSWEFYLEILE----CGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
++KV W++ L++ + G P + ++ L+ G + A +F+E+
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRL----KGVMESERIFPD----------------- 297
P FN L+ ++ + FRL KG +E ++ D
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 298 -------------------VFTF---SALINGLCKESRSD--EANHLFDEMCRRGLVPNG 333
F F +A N L K +D L DEM GL PN
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQ 559
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
+T++TLID G V+ A++ + M G RPD+V Y I + LK A L E
Sbjct: 560 ITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEE 619
Query: 394 MNARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
M +KP+ +T+ TL+ K G S LE+++
Sbjct: 620 MRRYQIKPNWVTYNTLLKARSKYG---SLLEVRQ 650
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 226 PKVYLFNVLMH--GFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
P +Y+ ++ G C GD +R +++++ K ++P + N+L++ S ++
Sbjct: 265 PNMYICRTMIDVCGLC--GDYVKSRYIYEDLLKENIKPNIYVINSLMN--VNSHDLGYTL 320
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR---RGLVP-NGVTFTTL 339
++ M+ + D+ +++ L+ C R D A ++ E R GL+ + T+ T+
Sbjct: 321 KVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTI 380
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
I ALK M G+ P+ T+++LI+ G +++A L EM A G
Sbjct: 381 IKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGC 440
Query: 400 KPDKITFTTLMDGCCKDGDMESALEI 425
+P+ F L+ C + + A +
Sbjct: 441 EPNSQCFNILLHACVEACQYDRAFRL 466
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 222 CGYPPKVYLFNVLMHGFCKVGDIRSARLVFD------EIPKRKLRPTVVSFNTLISGYCK 275
C P L ++HGF K GD+ S ++ + P + T++ L Y K
Sbjct: 226 CLLPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVK 285
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH---LFDEMCRRGLVPN 332
S + E LK E I P+++ ++L+N S + + ++ M + +
Sbjct: 286 SRYIYEDL-LK-----ENIKPNIYVINSLMN-----VNSHDLGYTLKVYKNMQILDVTAD 334
Query: 333 GVTFTTLIDGQCKDGKVDLA---LKKFQIMLDQG-IRPDLVTYNALINGLCKVGDLKEAR 388
++ L+ C G+VDLA K+ + M G ++ D TY +I K A
Sbjct: 335 MTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWAL 394
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
K+ ++M + G+ P+ T+++L+ C G +E A + + M+ G E ++ F +
Sbjct: 395 KVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNI 449
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 6/181 (3%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y ++L+ P +Y+ N LM+ D+ V+ + + + S+N L+ C
Sbjct: 289 IYEDLLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCC 346
Query: 275 KSGNV---EEGFRLKGVMESERIFP-DVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
+G V ++ ++ MES + D FT+ +I A + D+M G+
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
PN T+++LI G V+ A F+ ML G P+ +N L++ + A +L
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 391 L 391
Sbjct: 467 F 467
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 148 FLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVK 207
+ MP + +V + +I+ + +G +D AV R + K+ PL C + + +
Sbjct: 158 LFEKMPERNAV-SWSAMITGFCQNGEVDSAVVLFRKMPVKD-SSPL--CALVAGLIKNER 213
Query: 208 PPGPSWEF-YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIP----------- 255
+W L G VY +N L+ G+ + G + +AR +FD+IP
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 256 KRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSD 315
+ + VVS+N++I Y K G+V L M+ D +++ +I+G SR +
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRME 329
Query: 316 EANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALI 375
+A LF EM R + ++ ++ G G V+LA F+ ++ V++N++I
Sbjct: 330 DAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEK----HTVSWNSII 381
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDG 412
K D KEA L MN G KPD T T+L+
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV---EEGFRLKG 287
+N ++ G+ K ++ AR +FD +PKR VV++NT+ISGY G + EE +L
Sbjct: 74 WNTMISGYVKRREMNQARKLFDVMPKRD----VVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
M S D F+++ +I+G K R EA LF++M R N V+++ +I G C++G
Sbjct: 130 EMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNG 181
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA--RGLKPDKIT 405
+VD A+ F+ M + P AL+ GL K L EA +L + + G +
Sbjct: 182 EVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
Query: 406 FTTLMDGCCKDGDMESA 422
+ TL+ G + G +E+A
Sbjct: 238 YNTLIVGYGQRGQVEAA 254
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
+ +N ++ G+ K I A L+F+++P+R VS++ +I+G+C++G V+ L
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-----CRRGLVPNGVTFTTLIDGQ 343
M + P AL+ GL K R EA + + R LV + TLI G
Sbjct: 193 MPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLV---YAYNTLIVGY 245
Query: 344 CKDGKVDLALKKFQIMLD-----------QGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
+ G+V+ A F + D + ++V++N++I KVGD+ AR L +
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 393 EMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+M R D I++ T++DG ME A + M
Sbjct: 306 QMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 40/188 (21%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL 285
P V + N L+ + + G+I +R +FDE+ KL+ V+++N +I GY GN E L
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNL 497
Query: 286 KGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCK 345
G M+S I+P TF +++N DEA F M
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM--------------------- 536
Query: 346 DGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKIT 405
M I P + Y++L+N G +EA ++ M +PDK
Sbjct: 537 -------------MSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTV 580
Query: 406 FTTLMDGC 413
+ L+D C
Sbjct: 581 WGALLDAC 588
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 100/195 (51%), Gaps = 14/195 (7%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+++ G+ VG++ AR F++ P++ VS+N++I+ Y K+ + +E L M
Sbjct: 346 WNMMVSGYASVGNVELARHYFEKTPEKH----TVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 291 SERIFPDVFTFSALIN---GLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
E PD T ++L++ GL + + ++ + ++P+ LI + G
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMH----QIVVKTVIPDVPVHNALITMYSRCG 457
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFT 407
++ ++ +I + ++ +++T+NA+I G G+ EA L M + G+ P ITF
Sbjct: 458 EI---MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 408 TLMDGCCKDGDMESA 422
++++ C G ++ A
Sbjct: 515 SVLNACAHAGLVDEA 529
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMES 291
N ++ + G I AR +F+++ R V++NT+ISGY K + + +L VM
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 292 ERIFPDVFTFSALINGL--CKESRS-DEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
DV T++ +I+G C R +EA LFDEM R + ++ T+I G K+ +
Sbjct: 100 R----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKP 401
+ AL F+ M ++ + V+++A+I G C+ G++ A L +M + P
Sbjct: 152 IGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
R T N +I +SG + E + +E+ + T++ +I+G K ++A
Sbjct: 40 FRATNKELNQMI----RSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQAR 91
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
LFD M +R + VT+ T+I G G + L++ + + D+ D ++N +I+G
Sbjct: 92 KLFDVMPKRDV----VTWNTMISGYVSCGGIRF-LEEARKLFDEMPSRDSFSWNTMISGY 146
Query: 379 CKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
K + EA L +M R + ++++ ++ G C++G+++SA+ + ++M
Sbjct: 147 AKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
+ K G + ARLVFD + + V++NT+I GY +SG V+ ++ M ER D
Sbjct: 119 YSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDNAAKMFDKM-PER---D 170
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
+ +++A+ING K+ +EA F EM G+ P+ V ++ G + L +
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
+L Q + ++ N+LI+ C+ G ++ AR++ M R + +++ +++ G +G
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV----VSWNSVIVGFAANG 286
Query: 418 DMESALEIKKRMVEEGIELDAVAFT 442
+ +L ++M E+G + DAV FT
Sbjct: 287 NAHESLVYFRKMQEKGFKPDAVTFT 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 62/283 (21%)
Query: 146 ASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQ-------IPLRACEN 198
A MP ++ ++ + +I+ + G+ ++A+ R ++ ++ L AC N
Sbjct: 160 AKMFDKMP-ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 199 L--LRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPK 256
L L + + V + +L + V + N L+ +C+ G + AR VF + K
Sbjct: 219 LGALSFGLWV---------HRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 257 RKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDE 316
R TVVS+N++I G+ +GN E V+
Sbjct: 270 R----TVVSWNSVIVGFAANGNAHESL--------------VY----------------- 294
Query: 317 ANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM-LDQGIRPDLVTYNALI 375
F +M +G P+ VTFT + G V+ L+ FQIM D I P + Y L+
Sbjct: 295 ----FRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLV 350
Query: 376 NGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGD 418
+ + G L++A KL+ M +KP+++ +L+ C G+
Sbjct: 351 DLYSRAGRLEDALKLVQSMP---MKPNEVVIGSLLAACSNHGN 390
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
++ GY +++ + ++ + K GD+ +A+ FD IP P V++ T+ISG ++G
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV----PDDVAWTTMISGCIENGEE 599
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
E F + M + PD FT + L + ++ + + + T+L
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSL 659
Query: 340 IDGQCKDGKVDLA---LKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
+D K G +D A K+ ++M ++ +NA++ GL + G+ KE +L +M +
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMM-------NITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
G+KPDK+TF ++ C G + A + + M
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 226 PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG-----NVE 280
P+ +L N L+ + K G + AR VFD++P R L VS+N++++ Y +S N++
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMPDRDL----VSWNSILAAYAQSSECVVENIQ 127
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDE-MCRRGLVPNGVTFTTL 339
+ F L ++ + ++ T S ++ LC S A+ F C+ GL + L
Sbjct: 128 QAFLLFRILRQDVVYTSRMTLSPMLK-LCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
++ K GKV K+ +++ ++ D+V +N ++ ++G +EA L + ++ GL
Sbjct: 187 VNIYLKFGKV----KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGL 242
Query: 400 KPDKITFTTLMDGCCKDGD 418
P++IT L D D
Sbjct: 243 NPNEITLRLLARISGDDSD 261
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
+L+ Y K G++++ + L +E ++ ++A++ GL + E LF +M
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIE----MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIML-DQGIRPDLVTYNALINGLCKVGDLKE 386
G+ P+ VTF ++ G V A K + M D GI+P++ Y+ L + L + G +K+
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 387 ARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE-LDAVAFTM 443
A L+ M+ ++ + TL+ C GD E+ + +++E +E LD+ A+ +
Sbjct: 774 AENLIESMS---MEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDSSAYVL 826
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 16/277 (5%)
Query: 165 ISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGY 224
+S Y SG ++C + + +++ +L +KV + + L+ G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 225 PPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFR 284
+ + N L++ +CK+ AR VFD + +R L +S+N++I+G ++G E
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL----ISWNSVIAGIAQNGLEVEAVC 402
Query: 285 LKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT----FTTLI 340
L + + PD +T ++++ S E L ++ + N V+ T LI
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
D ++ +K+ +I+ ++ DLV +NA++ G + D + KL M+ +G +
Sbjct: 460 DAYSRNR----CMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
D T T+ C + ++ ++ G +LD
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 13/277 (4%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLV-RKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
+ +++++ L+S+Y +G +D+A ++L+ KN R ++ +
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN---RFRGDYFTFSSLLSACRIEQGKQ 262
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ + + Y + + L++ + K + AR F+ + R VVS+N +I G+
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFA 318
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
++G E RL G M E + PD TF+++++ K S E + + ++G
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
+LI ++G + AL F + + PDLV++ ++I L G +E+ ++ M
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIRE----PDLVSWTSVIGALASHGFAEESLQMFESM 434
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+ L+PDKITF ++ C G ++ L KRM E
Sbjct: 435 -LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 234 LMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESE- 292
L+H + K G I AR VF+ + R L V +N L+S Y +G ++E F L +M S+
Sbjct: 183 LVHFYGKCGLIVEARRVFEAVLDRDL----VLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 293 -RIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDL 351
R D FTFS+L++ C+ + + + + ++ + +P T L++ K +
Sbjct: 239 NRFRGDYFTFSSLLSA-CRIEQGKQIHAILFKVSYQFDIP---VATALLNMYAKSNHLSD 294
Query: 352 ALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMD 411
A + F+ M + ++V++NA+I G + G+ +EA +L +M L+PD++TF +++
Sbjct: 295 ARECFESM----VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 412 GCCKDGDMESALEIKKRMVEEG 433
C K + +++ + ++G
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKG 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC-KSGNVEE 281
G ++L N L+ + K+ + A +FDE+P R +V++N LI G + G+
Sbjct: 66 GIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLR----NIVTWNILIHGVIQRDGDTNH 121
Query: 282 GFRLKGVMESERIFPDV----FTFSALINGLCKESRSDEAN-HLFDEMCRRGLVPNGVTF 336
L S +F DV +F LI LC +S + +A L M ++GL +
Sbjct: 122 RAHLGFCYLSRILFTDVSLDHVSFMGLIR-LCTDSTNMKAGIQLHCLMVKQGLESSCFPS 180
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
T+L+ K G + A + F+ +LD+ DLV +NAL++ G + EA LL M +
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDR----DLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 397 --RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAF 441
+ D TF++L+ C +E+G ++ A+ F
Sbjct: 237 DKNRFRGDYFTFSSLLSAC---------------RIEQGKQIHAILF 268
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 9/289 (3%)
Query: 155 QQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWE 214
++++ + +IS + + G +A + +++ ++ +LR + +
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
++ L+ G ++ L+ + K GDI AR F+ +P++ T V++N +I+GY
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEK----TTVAWNNVIAGYA 301
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
G EE L M + D FT S +I K ++ + + R G V
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
T L+D K G+VD A + + D+ R +++++NAL+ G G +A KL +M
Sbjct: 362 ANTALVDFYSKWGRVDTA----RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE-EGIELDAVAFT 442
A + P+ +TF ++ C G E EI M E GI+ A+ +
Sbjct: 418 IAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYA 466
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P+ Y+ N ++ K G I AR +FDEIP+R L S+ ++ISG+ GN E
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNL----YSYYSIISGFVNFGNYVEA 208
Query: 283 FRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDG 342
F L +M E + TF+ ++ L + G+V N LID
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 343 QCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPD 402
K G ++ A F+ M ++ V +N +I G G +EA LL +M G+ D
Sbjct: 269 YSKCGDIEDARCAFECMPEK----TTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID 324
Query: 403 KITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+ T + ++ K +E + ++ G E + VA T
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 149 LQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKP 208
+ MP +++ + ++ +I+ Y G+ ++A+ + +R + I ++R K+
Sbjct: 282 FECMP-EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
+ + + ++ G+ ++ L+ + K G + +AR VFD++P R ++S+N
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP----RKNIISWNA 396
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR-R 327
L+ GY G + +L M + + P+ TF A+++ S++ +F M
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH 456
Query: 328 GLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEA 387
G+ P + + +I+ +DG +D A+ + ++ + + AL+N C++ + E
Sbjct: 457 GIKPRAMHYACMIELLGRDGLLDEAIA---FIRRAPLKTTVNMWAALLNA-CRMQENLEL 512
Query: 388 RKLLNEMNARGLKPDKITFTTLM 410
+++ E G+ P+K+ +M
Sbjct: 513 GRVVAE-KLYGMGPEKLGNYVVM 534
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 229 YLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGV 288
++++++M G+ ++GD+ AR +F + R L V +NTLI+GY ++G ++
Sbjct: 209 FVWSLMMSGYFRIGDVHEARAIFYRVFARDL----VIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 289 MESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGK 348
M+ E PD T S++++ + R D + + RG+ N LID K G
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
++ A F+ + +R + N++I+ L G KEA ++ + M + LKPD+ITF
Sbjct: 325 LENATSVFESI---SVRS-VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 409 LMDGCCKDGDMESALEIKKRM 429
++ C G + L+I M
Sbjct: 381 VLTACVHGGFLMEGLKIFSEM 401
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
+ E ++ G V + + L+ + K G + SAR VFDE+P+R V ++N +I GY
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYM 123
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM---------- 324
+G + G+ E + + T+ +I G K ++A LF+ M
Sbjct: 124 SNG---DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAW 180
Query: 325 ---------------CRRGL--VP--NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIR 365
R+ +P N ++ ++ G + G V A F + +
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR--- 237
Query: 366 PDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEI 425
DLV +N LI G + G +A M G +PD +T ++++ C + G ++ E+
Sbjct: 238 -DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 426 KKRMVEEGIELD 437
+ GIEL+
Sbjct: 297 HSLINHRGIELN 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 42/272 (15%)
Query: 156 QSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEF 215
+ +++++ LI+ Y +G+ DDA+
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDA----------------------------------- 261
Query: 216 YLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCK 275
+ + GY P + ++ + G + R V I R + N LI Y K
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 276 SGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVT 335
G++E V ES + V +++I+ L + EA +F M L P+ +T
Sbjct: 322 CGDLENA---TSVFESISV-RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 336 FTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMN 395
F ++ G + LK F M Q ++P++ + LI+ L + G LKEA +L+ EM+
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 396 ARGLKPDKITFTTLMDGCCKDGDMESALEIKK 427
+KP+ L+ C D E A ++ K
Sbjct: 438 ---VKPNDTVLGALLGACKVHMDTEMAEQVMK 466
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
L+ Y P V ++ +++ + +VG I+ A F E+ + P V+ T++ Y + G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 280 EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTL 339
++ RI ++ +++ L K+S + L+ EM G+ PN T+T +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 340 IDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGL 399
+ K G + ALK F M G P+ VTY+++I+ K GD ++A L +M ++G+
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 400 KPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
P T T++ K + AL + M I D V
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 2/281 (0%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ +L++A T+ G +A R +KN+++ L++ M++ + E Y
Sbjct: 739 AVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYE 798
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+ G P + +N ++ + + + A +F + L + +I Y K G
Sbjct: 799 RMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGG 858
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR-SDEANHLFDEMCRRGLVPNGVTF 336
+ E L M+ + I P +++ ++ +C SR E + L M R G + T+
Sbjct: 859 KMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTY 917
Query: 337 TTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNA 396
TLI + + A K ++ ++GI +++L++ L K G ++EA + +M+
Sbjct: 918 LTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSE 977
Query: 397 RGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
G+ PD T++ G GD E + ++M+ +E D
Sbjct: 978 AGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 128/317 (40%), Gaps = 24/317 (7%)
Query: 137 GHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRAC 196
G + + + +SF++ ++ ++ D++I G + L+ Q L+
Sbjct: 634 GSSAVNRVISSFVREGDVSKAEMIADIIIRL----GLRMEEETIATLIAVYGRQHKLKEA 689
Query: 197 ENLLRYMMKVKPPGPS------------------WEFYLEILECGYPPKVYLFNVLMHGF 238
+ L + K PG S + ++E E G P ++L++
Sbjct: 690 KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNAL 749
Query: 239 CKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDV 298
G R A + ++ + V +NTLI ++G ++ + M + + +
Sbjct: 750 TNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSI 809
Query: 299 FTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQI 358
T++ +I+ + + D+A +F R GL + +T +I K GK+ AL F
Sbjct: 810 QTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSE 869
Query: 359 MLDQGIRPDLVTYNALINGLCKVGDL-KEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M +GI+P +YN ++ +C L E +LL M G D T+ TL+ +
Sbjct: 870 MQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESS 928
Query: 418 DMESALEIKKRMVEEGI 434
A + + E+GI
Sbjct: 929 QFAEAEKTITLVKEKGI 945
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 34/246 (13%)
Query: 232 NVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRL------ 285
N ++ F + GD+ A ++ D I + LR + TLI+ Y + ++E RL
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE 698
Query: 286 -----KGVMES-----------ERIF------------PDVFTFSALINGLCKESRSDEA 317
K V+ S E + P T S L+N L + EA
Sbjct: 699 SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA 758
Query: 318 NHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALING 377
H+ + + + V + TLI + GK+ A + ++ M G+ + TYN +I+
Sbjct: 759 EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 378 LCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELD 437
+ L +A ++ + GL D+ +T ++ K G M AL + M ++GI+
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 438 AVAFTM 443
++ M
Sbjct: 879 TPSYNM 884
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 126/310 (40%)
Query: 132 LVSRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI 191
L ++G F+ + + SV+V+ +++ Y G + A + + + +
Sbjct: 162 LKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP 221
Query: 192 PLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVF 251
AC +L + FY + E ++N ++ K ++
Sbjct: 222 DAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW 281
Query: 252 DEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKE 311
E+ + + P ++ ++S Y K G EE + G M+S P+ T+S++I+ K
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 312 SRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTY 371
++A L+++M +G+VP+ T T++ K AL F M I D V
Sbjct: 342 GDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIR 401
Query: 372 NALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVE 431
+I K+G +A+ + E L D+ T+ + G++ AL++ + M
Sbjct: 402 GLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 432 EGIELDAVAF 441
I L A+
Sbjct: 462 RDIPLSRFAY 471
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 115/271 (42%)
Query: 164 LISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECG 223
++ Y G + + V+++ + + +L + K G + +LE++E G
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 224 YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGF 283
PP + + +++ + K G A F E+ P V+++++IS K+G+ E+
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 284 RLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQ 343
L M S+ I P +T + +++ K +A LF +M R + + V +I
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 344 CKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDK 403
K G A F+ + D TY A+ G++ +A ++ M R + +
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 404 ITFTTLMDGCCKDGDMESALEIKKRMVEEGI 434
+ ++ K +++ A E + + + G+
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRALSKTGL 499
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N L+HG+ + G++ AR VFD+IP++ VS+N +IS Y K G++ L M
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEKD----AVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVD 350
+++ LI G A FD M ++ NGV++ T+I G K G V
Sbjct: 229 ----LKSPASWNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQ 280
Query: 351 LALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG--LKPDKITFTT 408
A + F++M + D + Y+A+I + G K+A KL +M R ++PD+IT ++
Sbjct: 281 SAEELFRLM----SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELD 437
++ + G+ ++ + E GI++D
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKID 365
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 231 FNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVME 290
+N+L+ G+ +++ AR FD +P++ VS+ T+ISGY K G+V+ L +M
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELFRLMS 290
Query: 291 SERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG--LVPNGVTFTTLIDGQCKDGK 348
+ D + A+I + + +A LF +M R + P+ +T ++++ + G
Sbjct: 291 KK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 349 VDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTT 408
+ + GI+ D + +LI+ K GD +A K+ + +N K D ++++
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSA 402
Query: 409 LMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++ GC +G A + M+E+ I + V FT
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFT 436
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 144 LFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQI--PLRACENLLR 201
L ++ MP Q++ + + +IS YT G + A + RL+ KK+ + + AC
Sbjct: 250 LARTYFDAMP-QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC----- 303
Query: 202 YMMKVKPPGPSWEFYLEILECG---YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRK 258
Y KP + + + ++LE P ++ L +V+ ++G+ V I +
Sbjct: 304 YTQNGKPK-DALKLFAQMLERNSYIQPDEITLSSVV-SANSQLGNTSFGTWVESYITEHG 361
Query: 259 LRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEAN 318
++ + +LI Y K G+ + F++ + + D ++SA+I G + EAN
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGMATEAN 417
Query: 319 HLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGL 378
LF M + + PN VTFT L+ G V K F M D + P Y +++ L
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDML 477
Query: 379 CKVGDLKEARKLLNEM 394
+ G L+EA +L+ M
Sbjct: 478 GRAGRLEEAYELIKSM 493
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 221 ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE 280
E G + F+ L+ C+ + A +F +R+ + + N +++G+C GNV
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 281 EGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLI 340
E R + + + PDV ++ +IN L K+ + +A L+ M P+ +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 341 DGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARG-- 398
D C ++ AL+ F+ + ++G P++VTYN+L+ LCK+ ++ +L+ EM +G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 399 LKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
P+ +TF+ L+ + D++ LE RM + E+ + + +
Sbjct: 385 CSPNDVTFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNL 426
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 154/377 (40%), Gaps = 68/377 (18%)
Query: 118 TRPPFREAHSLLCFLVSRKGHGSASSLFASFLQTMPTQQSV----LVFD----------- 162
R ++ A+ L +V + H S+S L+ L + + VFD
Sbjct: 119 NRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNE 178
Query: 163 ----VLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
VL++ Y + +D+AV ++ + L A LL ++ + K + E
Sbjct: 179 KTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE-----FAE 233
Query: 219 ILECG----YPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
L C + + N++++G+C +G++ A+ + +I K RP VVS+ T+I+
Sbjct: 234 TLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALT 293
Query: 275 KSGNVEEGFRLKGVMESERIFPDV-----------------------------------F 299
K G + + L M R PDV
Sbjct: 294 KKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVV 353
Query: 300 TFSALINGLCKESRSDEANHLFDEMCRRG--LVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
T+++L+ LCK R+++ L +EM +G PN VTF+ L+ + VD+ L++
Sbjct: 354 TYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLER-- 411
Query: 358 IMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDG 417
M YN + + ++ R++ +EM GL PD+ T+T + G G
Sbjct: 412 -MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKG 470
Query: 418 DMESALEIKKRMVEEGI 434
+ AL + M+ +G+
Sbjct: 471 KIGEALSYFQEMMSKGM 487
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 11/218 (5%)
Query: 230 LFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVM 289
L+N ++ K+ VFDE+ KR ++ L++ Y + V+E GV
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAV---GVF 201
Query: 290 ESERIF---PDVFTFSALINGLCKESRSDEANHLFDEMC--RRGLVPNGVTFTTLIDGQC 344
E + F D+ F L+ LC+ + A LF C RR + +++G C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF---CSRRREFGCDIKAMNMILNGWC 258
Query: 345 KDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKI 404
G V A + ++ ++ RPD+V+Y +IN L K G L +A +L M PD
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 405 TFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
++D C + ALE+ + + E+G + + V +
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYN 356
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
V+ + +I+A T G + A++ R + ++ C N++ + K + E +
Sbjct: 282 VVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFR 341
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLR-----PTVVSFNTLISG 272
EI E G P V +N L+ CK IR V++ + + +L+ P V+F+ L+
Sbjct: 342 EISEKGPDPNVVTYNSLLKHLCK---IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 273 YCKSGNV----EEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
+S +V E + K M S+ ++ + + + ++ ++ EM R G
Sbjct: 399 SQRSKDVDIVLERMAKNKCEMTSD-------LYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPD 367
L P+ T+T I G GK+ AL FQ M+ +G+ P+
Sbjct: 452 LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 146/360 (40%), Gaps = 37/360 (10%)
Query: 119 RPPFREAHSLLCFLVSRKGH-GSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDA 177
+P + L L + G A++LF+ L++ +V F+ +I G + +A
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTV-TFNTMIHTCGTHGHLSEA 359
Query: 178 VQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHG 237
++ + +K + + LL + E+Y +I + G P ++H
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVE------EGFRLKGVM-- 289
C+ + V E+ + +R S ++ Y G V E F+L V+
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 290 -----------------ESERIF----------PDVFTFSALINGLCKESRSDEANHLFD 322
E+E +F DV ++ +I K ++A LF
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 323 EMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVG 382
M +G P+ T+ +L VD A + MLD G +P TY A+I ++G
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 383 DLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
L +A L M G+KP+++ + +L++G + G +E A++ + M E G++ + + T
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 260 RPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANH 319
R V+ +N +I Y K+ E+ L M+++ +PD T+++L L DEA
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 320 LFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLC 379
+ EM G P T+ +I + G + A+ ++ M G++P+ V Y +LING
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 380 KVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
+ G ++EA + M G++ + I T+L+ K G +E A + +M
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 215 FYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
FY + G V +NV++ + K A +F + + P ++N+L
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
V+E R+ M P T++A+I + +A L++ M + G+ PN V
Sbjct: 562 GVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEV 621
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
+ +LI+G + G V+ A++ F++M + G++ + + +LI KVG L+EAR++ ++M
Sbjct: 622 VYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
PD +++ C G + A I + E+G D ++F
Sbjct: 682 KDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFA 728
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 33/260 (12%)
Query: 213 WEFYLEIL-----ECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFN 267
WE L + Y P V +N+++ + G RL + E+ + PT ++
Sbjct: 125 WERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYG 184
Query: 268 TLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRR 327
L+ Y K+G V+E M FPD T + ++ D A+ F C
Sbjct: 185 MLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC-A 243
Query: 328 GLVPNGVTFTTLIDGQCKDGKVD--------LALKKFQIMLDQGIRPDL----------- 368
G V + ID K+G L+++ F++ I L
Sbjct: 244 GKVDLDLDS---IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPR 300
Query: 369 -----VTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESAL 423
T+N LI+ K G L +A L +EM G+ D +TF T++ C G + A
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 424 EIKKRMVEEGIELDAVAFTM 443
+ K+M E+GI D + +
Sbjct: 361 SLLKKMEEKGISPDTKTYNI 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 4/282 (1%)
Query: 159 LVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYLE 218
+V+ LI+ + +SG +++A+Q R++ + +Q +L++ KV + Y +
Sbjct: 621 VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 219 ILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGN 278
+ + P V N ++ +G + A +F+ + + K V+SF T++ Y G
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYKGMGM 739
Query: 279 VEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEM-CRRGLVPNGVTFT 337
++E + M + D +F+ ++ + + E LF EM R L+ + TF
Sbjct: 740 LDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFK 799
Query: 338 TLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
TL K G A+ + Q ++ +P L T +G A + E+ +
Sbjct: 800 TLFTLLKKGGVPSEAVSQLQTAYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSG 857
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
+ + + ++ GD++ AL+ RM E+G+E D V
Sbjct: 858 EIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIV 899
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 214 EFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGY 273
+ Y + + G P ++ L++GF + G + A F + + ++ + +LI Y
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Query: 274 CKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNG 333
K G +EE R+ M+ PDV +++++ EA +F+ + +G +
Sbjct: 666 SKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DV 724
Query: 334 VTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNE 393
++F T++ G +D A++ + M + G+ D ++N ++ G L E +L +E
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHE 784
Query: 394 MNA-RGLKPDKITFTTLMDGCCKDG 417
M R L D TF TL K G
Sbjct: 785 MLVERKLLLDWGTFKTLFTLLKKGG 809
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 152 MPTQQSVLVFDVLISAYTDSGFMDDAVQCI-RLVRKKNLQIPLRACENLLRYMMKVKPPG 210
MP Q+ V+ ++ LIS+Y +G +DA+ R+ ++ NL+ + L +K
Sbjct: 107 MP-QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLE 165
Query: 211 PSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLI 270
Y ++ + V + N L+ FCK G + AR VFD + + ++ + +++
Sbjct: 166 IGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMV 220
Query: 271 SGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLV 330
GY +G ++E V+ DV ++A++NG + +R DEA LF M G+
Sbjct: 221 FGYVSTGRIDEA----RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 331 PNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKL 390
P+ +L+ G + G ++ + + + D V AL++ K G ++ A ++
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 391 LNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
E+ R D ++T+L+ G +G AL++ M G+ LDA+ F
Sbjct: 337 FYEIKER----DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 47/258 (18%)
Query: 220 LECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNV 279
++ G Y+ N LM + +G I VFDE+P+R VVS+N LIS Y +G
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRD----VVSWNGLISSYVGNGRF 128
Query: 280 EEGF---------------------------RLKGVMESERIFPDVFT--------FSAL 304
E+ LK + ERI+ V T +AL
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNAL 188
Query: 305 INGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGI 364
++ CK D+A +FD M + N +T+++ G G++D A +++ ++
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDK----NVKCWTSMVFGYVSTGRIDEA----RVLFERSP 240
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALE 424
D+V + A++NG + EA +L M G++PD +L+ GC + G +E
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 425 IKKRMVEEGIELDAVAFT 442
I + E + +D V T
Sbjct: 301 IHGYINENRVTVDKVVGT 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 228 VYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKG 287
V L+ +M+G+ + A +F + +RP +L++G ++G +E+G + G
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 288 VMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDG 347
+ R+ D +AL++ K + A +F E+ R + ++T+LI G +G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMNG 359
Query: 348 KVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR-GLKPDKITF 406
AL + M + G+R D +T+ A++ G + E RK+ + M R ++P
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 407 TTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ L+D C+ G ++ A E+ +M E E
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDE 448
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 12/233 (5%)
Query: 217 LEILEC----GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
LE+ C G P ++ L+ G + G + + + I + ++ V L+
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
Y K G +E + ++ ER D ++++LI GL S A L+ EM G+ +
Sbjct: 324 YAKCGCIETALEVFYEIK-ER---DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLD 379
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLL 391
+TF ++ G V K F M ++ ++P + LI+ LC+ G L EA +L+
Sbjct: 380 AITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Query: 392 NEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIEL-DAVAFTM 443
++M + + +L+ G+++ A + +++ E +E+ D+ A T+
Sbjct: 440 DKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL--EKVEVSDSSAHTL 490
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 30/297 (10%)
Query: 134 SRKGHGSASSLFASFLQTMPTQQSVLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPL 193
S G ++S+ +++ + + S+ V + D G DA + L+R +
Sbjct: 13 SHVGSTASSNSWSTIVPALARFGSIGVLRAAVELIND-GEKPDASPLVHLLRVSGNYGYV 71
Query: 194 RACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDE 253
C L Y+ K G+ L N LM + + A VFDE
Sbjct: 72 SLCRQLHGYVTK----------------HGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE 115
Query: 254 IPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESR 313
+P P V+S+N+L+SGY +SG +EG L + +FP+ F+F+A + +
Sbjct: 116 MPD----PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 314 SDEANHLFDEMCRRGLVP-NGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYN 372
S + ++ + GL N V LID K G +D A+ FQ M ++ D V++N
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK----DTVSWN 227
Query: 373 ALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRM 429
A++ + G L+ ++M PD +T+ L+D K GD +A ++ M
Sbjct: 228 AIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 26/282 (9%)
Query: 157 SVLVFDVLISAYTDSGFMDDAVQCIRLVRKKN---LQIPLRACENLLRYMMKVKPPGPSW 213
+V+V + LI Y GFMDDAV + + +K+ + +C + + + W
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGL------W 244
Query: 214 EFYLEILECGYP-PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISG 272
F+ P P +N L+ F K GD +A V ++P P S+NT+++G
Sbjct: 245 FFH------QMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PNSSSWNTILTG 294
Query: 273 YCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPN 332
Y S E M S + D ++ S ++ + + + + + GL
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSR 354
Query: 333 GVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLN 392
V + LID K G LK ++M R +L+ +N +I+G + GD EA KL N
Sbjct: 355 VVVASALIDMYSKCG----MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFN 410
Query: 393 EM-NARGLKPDKITFTTLMDGCCK-DGDMESALEIKKRMVEE 432
++ R LKPD+ TF L+ C + ME L + M+ E
Sbjct: 411 QLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINE 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G +V + + L+ + K G ++ A L+F +P++ L + +N +ISGY ++G+ E
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNL----IVWNEMISGYARNGDSIEA 405
Query: 283 FRLKGVMESERIF-PDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLID 341
+L ++ ER PD FTF L+ +C VP
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLL-----------------AVCSHCEVP---------- 438
Query: 342 GQCKDGKVDLALKKFQIMLDQ-GIRPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLK 400
+++ L F++M+++ I+P + +LI + + G++ +A++++ E G
Sbjct: 439 -------MEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEF---GFG 488
Query: 401 PDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
D + + L+ C D+++A + +M+E G
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELG 521
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 54/265 (20%)
Query: 193 LRACENLLRYMMKVKPPGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFD 252
L+AC NL + + + + +I + GY VY N L++ + G+ + A L+FD
Sbjct: 122 LKACSNLSAF-------EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD 174
Query: 253 EIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKES 312
IP+ P VS+N++I GY K+G ++ L M + + +++ +I+G +
Sbjct: 175 RIPE----PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQAD 226
Query: 313 RSDEANHLFDEMCRRGLVPNGVTFTT---------------------------------- 338
+ EA LF EM + P+ V+
Sbjct: 227 MNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286
Query: 339 -LIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
LID K G+++ AL+ F+ + + ++ + ALI+G G +EA EM
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKM 342
Query: 398 GLKPDKITFTTLMDGCCKDGDMESA 422
G+KP+ ITFT ++ C G +E
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEG 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 209 PGPSWEFYLEILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNT 268
P S Y +L P Y F L+ + + +I K V + N+
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNS 155
Query: 269 LISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRG 328
LI+ Y +GN F+L ++ PD +++++I G K + D A LF +M +
Sbjct: 156 LINSYAVTGN----FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK- 210
Query: 329 LVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEAR 388
N +++TT+I G + AL+ F M + + PD V+ ++ ++G L++ +
Sbjct: 211 ---NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 389 KLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIE 435
+ + +N ++ D + L+D K G+ME ALE+ K + ++ ++
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 216 YLEILECGYP-PKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYC 274
Y +I+ G+ P +L+N+++ GF + + L++ + +F +L+
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 275 KSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGV 334
EE ++ + DV+ ++LIN A+ LFD + P+ V
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDV 182
Query: 335 TFTTLIDGQCKDGKVDLALKKFQIMLDQGIRPDLVTYNALINGLCKVGDLKEARKLLNEM 394
++ ++I G K GK+D+AL F+ M ++ + +++ +I+G + KEA +L +EM
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 395 NARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAV 439
++PD ++ + C + G +E I + + I +D+V
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 25/304 (8%)
Query: 140 SASSLFASFLQTMPTQQSVLVFD-----------VLISAYTDSGFMDDAVQCIRLVRKKN 188
+ +SL S+ T + + L+FD +I Y +G MD A+ R + +KN
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 189 LQIPLRACENLLRYMMKVKPPGPSWEFYLEILECGYPP-KVYLFNVLMHGFCKVGDIRSA 247
+ ++ ++ + + + E+ P V L N L ++G +
Sbjct: 212 AI----SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL-SACAQLGALEQG 266
Query: 248 RLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALING 307
+ + + K ++R V LI Y K G +EE + ++ + V ++ALI+G
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK----SVQAWTALISG 322
Query: 308 LCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLA-LKKFQIMLDQGIRP 366
EA F EM + G+ PN +TFT ++ G V+ L + + D ++P
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 367 DLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIK 426
+ Y +++ L + G L EA++ + EM LKP+ + + L+ C ++E EI
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIG 439
Query: 427 KRMV 430
+ ++
Sbjct: 440 EILI 443
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 77/276 (27%)
Query: 223 GYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEG 282
G+ P ++L NVL++ + K + A +FD++P+R V+S+ T+IS Y K ++
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKA 146
Query: 283 FRLKGVMESERIFPDVFTF--------------------------------SALINGLCK 310
L +M + + P+V+T+ SALI+ K
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 311 ESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIM----------- 359
++A +FDEM + + + + ++I G ++ + D+AL+ F+ M
Sbjct: 207 LGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 360 -------------LDQGIRP---------DLVTYNALINGLCKVGDLKEARKLLNEMNAR 397
L+ G++ DL+ NAL++ CK G L++A ++ N+M R
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 398 GLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEG 433
D IT++T++ G ++G + AL++ +RM G
Sbjct: 323 ----DVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 48/298 (16%)
Query: 158 VLVFDVLISAYTDSGFMDDAVQCIRLVRKKNLQIPLRACENLLRYMMKVKPPGPSWEFYL 217
+ + +VLI+ Y ++DA Q + ++N+ + ++ K K + E +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLV 151
Query: 218 EILECGYPPKVYLFNVLMHGFCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSG 277
+L P VY ++ ++ + D+R ++ I K L V + LI + K G
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 278 NVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFT 337
E+ + E + D ++++I G + SRSD A LF M R G + T T
Sbjct: 209 EPEDALSVF----DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 338 T---------------------------------LIDGQCKDGKVDLALKKFQIMLDQGI 364
+ L+D CK G ++ AL+ F M ++
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-- 322
Query: 365 RPDLVTYNALINGLCKVGDLKEARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESA 422
D++T++ +I+GL + G +EA KL M + G KP+ IT ++ C G +E
Sbjct: 323 --DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 267 NTLISGYCKSGNVEEGFRLKGVMESERIFPDVFTFSALINGLCKESRSDEANHLFDEMCR 326
N L+ YCK G++E+ R+ M+ ER DV T+S +I+GL + S EA LF+ M
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMK-ER---DVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 327 RGLVPNGVTFTTLIDGQCKDGKVDLALKKFQIMLD-QGIRPDLVTYNALINGLCKVGDLK 385
G PN +T ++ G ++ F+ M GI P Y +I+ L K G L
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFTM 443
+A KLLNEM +PD +T+ TL+ C +M A K+++ E DA +T+
Sbjct: 413 DAVKLLNEMEC---EPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-DAGTYTL 466
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 40/237 (16%)
Query: 238 FCKVGDIRSARLVFDEIPKRKLRPTVVSFNTLISGYCKSGNVEEGFRLKGVMESERIFPD 297
C D+ A D + L +++ LI + V EG + + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 298 VFTFSALINGLCKESRSDEANHLFDEMCRRGLVPNGVTFTTLIDGQCKDGKVDLALKKFQ 357
+F + LIN K + ++A+ LFD+M +R N +++TT+I K AL+
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLV 151
Query: 358 IMLDQGIRPDLVTYN--------------------------------ALINGLCKVGDLK 385
+ML +RP++ TY+ ALI+ K+G+ +
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE 211
Query: 386 EARKLLNEMNARGLKPDKITFTTLMDGCCKDGDMESALEIKKRMVEEGIELDAVAFT 442
+A + +EM + D I + +++ G ++ + ALE+ KRM G + T
Sbjct: 212 DALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264