Miyakogusa Predicted Gene

Lj2g3v2533290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2533290.1 tr|B9I1A8|B9I1A8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_771495 PE=3
SV=1,46.3,4e-19,seg,NULL; Lectin_legB,Legume lectin domain; no
description,Concanavalin A-like lectin/glucanase, sub,CUFF.39046.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03140.1 | Symbols:  | Concanavalin A-like lectin protein kin...   110   4e-25
AT3G53380.1 | Symbols:  | Concanavalin A-like lectin protein kin...   109   7e-25
AT5G55830.1 | Symbols:  | Concanavalin A-like lectin protein kin...    81   2e-16

>AT5G03140.1 | Symbols:  | Concanavalin A-like lectin protein kinase
           family protein | chr5:737750-739885 REVERSE LENGTH=711
          Length = 711

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 66/107 (61%)

Query: 22  AVEFDFXXXXXXXXXXXXDAHLTNGTVSLTRDLAVPFSGAGQALYSRPVRFRQPGTNIPA 81
           A  FD             DAHL NGT+ LTR+L+VP S AG+ALY +PV+FR P T  PA
Sbjct: 34  ATRFDLGTLTLSSLKLLGDAHLNNGTIKLTRELSVPTSTAGKALYGKPVKFRHPETKSPA 93

Query: 82  XXXXXXXXXXXNLNPSSIGGGLAFVITPDDETVGDAGGYLGLAVEQG 128
                      NLNPSSIGGGLAFVI+PD++ +G  GG+LGL  E G
Sbjct: 94  SFTTYFSFSVTNLNPSSIGGGLAFVISPDEDYLGSTGGFLGLTEETG 140


>AT3G53380.1 | Symbols:  | Concanavalin A-like lectin protein kinase
           family protein | chr3:19789204-19791351 REVERSE
           LENGTH=715
          Length = 715

 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 65/100 (65%)

Query: 24  EFDFXXXXXXXXXXXXDAHLTNGTVSLTRDLAVPFSGAGQALYSRPVRFRQPGTNIPAXX 83
           +FDF            DA L+NG V LTRDL+VP SGAG+ LYS P+RFRQPGT+ P   
Sbjct: 23  QFDFSTLAISNLKLLGDARLSNGIVGLTRDLSVPNSGAGKVLYSNPIRFRQPGTHFPTSF 82

Query: 84  XXXXXXXXXNLNPSSIGGGLAFVITPDDETVGDAGGYLGL 123
                    N+NPSSIGGGLAFVI+PD  ++G AGG LGL
Sbjct: 83  SSFFSFSITNVNPSSIGGGLAFVISPDANSIGIAGGSLGL 122


>AT5G55830.1 | Symbols:  | Concanavalin A-like lectin protein kinase
           family protein | chr5:22594655-22596700 FORWARD
           LENGTH=681
          Length = 681

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)

Query: 40  DAHLTNGTVSLTRDLAVPFSGAGQALYSRPVRFRQPGTNIPAXXXXXXXXXXXNLN--PS 97
           D+HL NG V LTR+L VP + +G  +Y+ P+RF  P +N  A           NLN  P+
Sbjct: 48  DSHLRNGVVGLTRELGVPDTSSGTVIYNNPIRFYDPDSNTTASFSTHFSFTVQNLNPDPT 107

Query: 98  SIGGGLAFVITPDDETVGDAGGYLGL 123
           S G GLAF ++ D++T+G  GGYLGL
Sbjct: 108 SAGDGLAFFLSHDNDTLGSPGGYLGL 133