Miyakogusa Predicted Gene

Lj2g3v2522130.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2522130.2 Non Chatacterized Hit- tr|I3S8P0|I3S8P0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; ANDROGEN INDUCED INHIBITOR OF PROLIFERATION
(AS3) / PDS5-RELATED,CUFF.39039.2
         (181 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31880.2 | Symbols:  | LOCATED IN: cytosol; EXPRESSED IN: 24 ...   177   4e-45
AT4G31880.1 | Symbols:  | LOCATED IN: cytosol, chloroplast; EXPR...   177   5e-45
AT1G15940.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   116   7e-27
AT5G47690.3 | Symbols:  | binding | chr5:19317899-19327014 FORWA...   113   8e-26
AT5G47690.2 | Symbols:  | binding | chr5:19317899-19327014 FORWA...   113   8e-26
AT5G47690.1 | Symbols:  | binding | chr5:19317899-19327014 FORWA...   113   8e-26
AT1G80810.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...    96   1e-20
AT1G80810.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...    96   1e-20
AT1G77600.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    69   1e-12
AT1G77600.2 | Symbols:  | ARM repeat superfamily protein | chr1:...    69   1e-12
AT1G77600.3 | Symbols:  | ARM repeat superfamily protein | chr1:...    69   1e-12

>AT4G31880.2 | Symbols:  | LOCATED IN: cytosol; EXPRESSED IN: 24
           plant structures; EXPRESSED DURING: 14 growth stages;
           BEST Arabidopsis thaliana protein match is:
           Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). |
           chr4:15419435-15423939 REVERSE LENGTH=872
          Length = 872

 Score =  177 bits (448), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 117/164 (71%)

Query: 6   LTDKELRMEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLK 65
           ++D +  +E +++EAG KL DPPSS+DELL+ LD++   ++ VEQS  + M  AL+PL+K
Sbjct: 1   MSDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMK 60

Query: 66  ALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSS 125
            L   KL +HSD  V+V++A+CISE+ RITAPD PY+DDQMKEVF LIVS+ E+L D SS
Sbjct: 61  GLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSS 120

Query: 126 RSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           RSYAKRI+IL  +AKVRS              EMFQHF K IR+
Sbjct: 121 RSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRD 164


>AT4G31880.1 | Symbols:  | LOCATED IN: cytosol, chloroplast;
           EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
           growth stages; BEST Arabidopsis thaliana protein match
           is: Tudor/PWWP/MBT superfamily protein
           (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781
           proteins in 2973 species: Archae - 289; Bacteria -
           24182; Metazoa - 56725; Fungi - 20130; Plants - 6559;
           Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
           BLink). | chr4:15419435-15423939 REVERSE LENGTH=873
          Length = 873

 Score =  177 bits (448), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 117/164 (71%)

Query: 6   LTDKELRMEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLK 65
           ++D +  +E +++EAG KL DPPSS+DELL+ LD++   ++ VEQS  + M  AL+PL+K
Sbjct: 1   MSDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMK 60

Query: 66  ALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSS 125
            L   KL +HSD  V+V++A+CISE+ RITAPD PY+DDQMKEVF LIVS+ E+L D SS
Sbjct: 61  GLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSS 120

Query: 126 RSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           RSYAKRI+IL  +AKVRS              EMFQHF K IR+
Sbjct: 121 RSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRD 164


>AT1G15940.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:5473672-5478050 FORWARD LENGTH=990
          Length = 990

 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 96/165 (58%)

Query: 10  ELRMEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTA 69
           E   E+ L +A   L  P  S D  L+LL+ +E  +++VEQ  +  +  AL P ++AL +
Sbjct: 9   EFSKEQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVS 68

Query: 70  DKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYA 129
             L+R+ D  VRVS+ SC++E++RITAP+ PY D+QMK++F + + A E L D SSRSY 
Sbjct: 69  ADLLRNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYR 128

Query: 130 KRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIREFLQQL 174
           K   IL  +AKVRS              EMFQ F K IR    QL
Sbjct: 129 KAEVILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQL 173


>AT5G47690.3 | Symbols:  | binding | chr5:19317899-19327014 FORWARD
           LENGTH=1607
          Length = 1607

 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 91/156 (58%)

Query: 14  EKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLM 73
           E++L E GSKL   P S D LL LL     C+S +EQS    +L ++ P L A+   +++
Sbjct: 6   EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65

Query: 74  RHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRIN 133
            H D+ V++ +ASC+SE+ RITAP+ PY D+ MK++F LIVSA   L+D+S  S+ +R+ 
Sbjct: 66  NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125

Query: 134 ILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           IL  +AK RS              E+F  F    R+
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARD 161


>AT5G47690.2 | Symbols:  | binding | chr5:19317899-19327014 FORWARD
           LENGTH=1606
          Length = 1606

 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 91/156 (58%)

Query: 14  EKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLM 73
           E++L E GSKL   P S D LL LL     C+S +EQS    +L ++ P L A+   +++
Sbjct: 6   EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65

Query: 74  RHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRIN 133
            H D+ V++ +ASC+SE+ RITAP+ PY D+ MK++F LIVSA   L+D+S  S+ +R+ 
Sbjct: 66  NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125

Query: 134 ILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           IL  +AK RS              E+F  F    R+
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARD 161


>AT5G47690.1 | Symbols:  | binding | chr5:19317899-19327014 FORWARD
           LENGTH=1605
          Length = 1605

 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 91/156 (58%)

Query: 14  EKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLM 73
           E++L E GSKL   P S D LL LL     C+S +EQS    +L ++ P L A+   +++
Sbjct: 6   EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65

Query: 74  RHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRIN 133
            H D+ V++ +ASC+SE+ RITAP+ PY D+ MK++F LIVSA   L+D+S  S+ +R+ 
Sbjct: 66  NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125

Query: 134 ILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           IL  +AK RS              E+F  F    R+
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARD 161


>AT1G80810.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:30365575-30368898 FORWARD LENGTH=773
          Length = 773

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 70/119 (58%)

Query: 56  MLIALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVS 115
           M  AL P   AL +  L+ H D  VRVS+ SC++E++RITAP+ PY DD MKE+F L + 
Sbjct: 1   MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60

Query: 116 AVENLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIREFLQQL 174
           A E L D SSRSY K   +L  +AKV+S              +MF++FFK IR    QL
Sbjct: 61  AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQL 119


>AT1G80810.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:30365575-30368898 FORWARD LENGTH=774
          Length = 774

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 70/119 (58%)

Query: 56  MLIALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVS 115
           M  AL P   AL +  L+ H D  VRVS+ SC++E++RITAP+ PY DD MKE+F L + 
Sbjct: 1   MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60

Query: 116 AVENLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIREFLQQL 174
           A E L D SSRSY K   +L  +AKV+S              +MF++FFK IR    QL
Sbjct: 61  AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQL 119


>AT1G77600.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:29152890-29162156 REVERSE LENGTH=1367
          Length = 1367

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 32  DELLNLLDRVECCVSSVEQ---SHTEPML----IALSPLLKALTADKLMRHSDEGVRVSI 84
           D L+ LL  V   +S ++Q   ++ E  L      L PL K++    L+++ D  V + +
Sbjct: 25  DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84

Query: 85  ASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINILYLLAKVRSX 144
             C+SEL RI AP  P+ED+ ++++F L ++    L D  S  ++KR  IL  +++++  
Sbjct: 85  TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144

Query: 145 XXXXXXXXXXXXXEMFQHFFKEIREFLQQ 173
                        EMF  FF  +RE  QQ
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQ 173


>AT1G77600.2 | Symbols:  | ARM repeat superfamily protein |
           chr1:29152890-29162156 REVERSE LENGTH=1410
          Length = 1410

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 32  DELLNLLDRVECCVSSVEQ---SHTEPML----IALSPLLKALTADKLMRHSDEGVRVSI 84
           D L+ LL  V   +S ++Q   ++ E  L      L PL K++    L+++ D  V + +
Sbjct: 25  DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84

Query: 85  ASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINILYLLAKVRSX 144
             C+SEL RI AP  P+ED+ ++++F L ++    L D  S  ++KR  IL  +++++  
Sbjct: 85  TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144

Query: 145 XXXXXXXXXXXXXEMFQHFFKEIREFLQQ 173
                        EMF  FF  +RE  QQ
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQ 173


>AT1G77600.3 | Symbols:  | ARM repeat superfamily protein |
           chr1:29152890-29162156 REVERSE LENGTH=1424
          Length = 1424

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 32  DELLNLLDRVECCVSSVEQ---SHTEPML----IALSPLLKALTADKLMRHSDEGVRVSI 84
           D L+ LL  V   +S ++Q   ++ E  L      L PL K++    L+++ D  V + +
Sbjct: 25  DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84

Query: 85  ASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINILYLLAKVRSX 144
             C+SEL RI AP  P+ED+ ++++F L ++    L D  S  ++KR  IL  +++++  
Sbjct: 85  TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144

Query: 145 XXXXXXXXXXXXXEMFQHFFKEIREFLQQ 173
                        EMF  FF  +RE  QQ
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQ 173