Miyakogusa Predicted Gene

Lj2g3v2509010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2509010.1 Non Chatacterized Hit- tr|I3ST41|I3ST41_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.14,0,seg,NULL;
APG5,Autophagy-related protein 5; SUBFAMILY NOT NAMED,NULL; AUTOPHAGY
PROTEIN 5,Autophagy-,CUFF.39032.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17290.1 | Symbols: ATG5, APG5, ATATG5 | autophagy protein Ap...   430   e-121

>AT5G17290.1 | Symbols: ATG5, APG5, ATATG5 | autophagy protein Apg5
           family | chr5:5687160-5689821 REVERSE LENGTH=337
          Length = 337

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/340 (60%), Positives = 256/340 (75%), Gaps = 11/340 (3%)

Query: 3   EAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLISLLKPHFSSTLPPGQ 62
           EA KYVWEGAIPLQIHLH+S+               RIGYLPLLI L+KP+F  +LPPG+
Sbjct: 4   EAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLPPGE 63

Query: 63  DTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPSNLLLPCEGEDSVKWSF 122
           D+IWF+YKG PLKWYIPTGVLFDLLC EPERPWNLT+HFRGYP N+L+PCEGEDSVKW+F
Sbjct: 64  DSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNF 123

Query: 123 INSLKEAAYVINGNCKNVMNMSQPDQVELWGSVLNGNLESYRRVSSKLKLGTFEDKHTEN 182
           +NSLKEA Y+INGNCKNVMNMSQ DQ +LW SV+NG+L++Y R+S KLK+GT ED+ +  
Sbjct: 124 VNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEFSRK 183

Query: 183 INSVLPKSES-TGDTDAAGQVKSGRIPVRLYVWTVNEEFDDFEDAPQVDDWDKVSYINRP 241
            +   P+S+    +T+ AGQVK+ RIPVRLYV ++N++F++ ED P++D WD +SY+NRP
Sbjct: 184 TSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRP 243

Query: 242 VEIHNEDGKFFSLNDAVRRLLPEFFQGSSFDNEGDTNINRTTEEGENSGDPGSSFDAHEI 301
           VE   E+GK F+L DA++ LLPEF  G      G+      TEE + S          E+
Sbjct: 244 VEFLKEEGKCFTLRDAIKSLLPEFM-GDRAQTSGEERSIDDTEEADGS---------REM 293

Query: 302 AEIKLVRIQGIEPILEIPFSWVVNNLMNPEYFLHMCVCLK 341
            EIKLVRIQGIE  LEIPFSWVVNNLMNPE++LH+ V +K
Sbjct: 294 GEIKLVRIQGIEMKLEIPFSWVVNNLMNPEFYLHISVLVK 333