Miyakogusa Predicted Gene

Lj2g3v2507910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2507910.1 Non Chatacterized Hit- tr|I1JHR5|I1JHR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.6,0,no
description,Terpenoid synthase; Terpenoid synthases,Terpenoid
synthase; SQUALEN_PHYTOEN_SYN_1,Squ,CUFF.39047.1
         (435 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17230.2 | Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-56...   580   e-166
AT5G17230.1 | Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-56...   580   e-166
AT5G17230.3 | Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-56...   570   e-163

>AT5G17230.2 | Symbols: PSY | PHYTOENE SYNTHASE |
           chr5:5659839-5662087 REVERSE LENGTH=422
          Length = 422

 Score =  580 bits (1494), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/429 (68%), Positives = 347/429 (80%), Gaps = 26/429 (6%)

Query: 2   SVTLFWVA-SFPNLQVSNSTRLLDSIRDVRLFDSSKFMS--RDFRSIRAKKDRKKRWRFC 58
           SV + WVA S  N    N+  L      VR+ +SS+  S  ++ R  + KK +   W   
Sbjct: 4   SVAVLWVATSSLNPDPMNNCGL------VRVLESSRLFSPCQNQRLNKGKKKQIPTWS-- 55

Query: 59  SLSTGVKYACVGQSGLESASSFPMISNVLANPAAAEVAVSSEQKVYDVVLKQASLIKRKL 118
             S+ V+           +    ++S+ L    + E+A+SSE+KVY+VVLKQA+L+ ++L
Sbjct: 56  --SSFVR---------NRSRRIGVVSSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQL 104

Query: 119 --SAGDHGVK--QNVFLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAI 174
             S+ D  VK  Q+V LPG+LSLL EAYDRCGE+CAEYAKTFYLGTLLMTPERR+AIWAI
Sbjct: 105 RSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAI 164

Query: 175 YVWCRRTDELVDGPNASHITPTALDRWESRLEELFQGRPFDMLDAAVSDTVTKFPVDIQP 234
           YVWCRRTDELVDGPNASHITP ALDRWE+RLE+LF+GRPFDMLDAA++DTV ++PVDIQP
Sbjct: 165 YVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQP 224

Query: 235 FKDMIEGMRTDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGISPDSQTSTESVYNAAL 294
           F+DMIEGMR DL+KSRY+NFD+LYLYCYYVAGTVGLMSVP+MGI P S+ +TESVYNAAL
Sbjct: 225 FRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAAL 284

Query: 295 ALGIANQLTNILRDVGEDASRGRVYLPQDELAQAGLSEDDIFAGKVTDKWRNFMKSQIKR 354
           ALGIANQLTNILRDVGEDA RGRVYLPQDELAQAGLS++DIFAGKVTDKWRNFMK Q+KR
Sbjct: 285 ALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKR 344

Query: 355 ARMFFDEAEKGVMELNKASRWPVLASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSL 414
           ARMFFDEAEKGV EL+ ASRWPV ASLLLYR+ILDEIEANDYNNFTKRAYV K KK+ +L
Sbjct: 345 ARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAAL 404

Query: 415 PAAYARTMV 423
           P AYA++++
Sbjct: 405 PLAYAKSVL 413


>AT5G17230.1 | Symbols: PSY | PHYTOENE SYNTHASE |
           chr5:5659839-5662087 REVERSE LENGTH=422
          Length = 422

 Score =  580 bits (1494), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/429 (68%), Positives = 347/429 (80%), Gaps = 26/429 (6%)

Query: 2   SVTLFWVA-SFPNLQVSNSTRLLDSIRDVRLFDSSKFMS--RDFRSIRAKKDRKKRWRFC 58
           SV + WVA S  N    N+  L      VR+ +SS+  S  ++ R  + KK +   W   
Sbjct: 4   SVAVLWVATSSLNPDPMNNCGL------VRVLESSRLFSPCQNQRLNKGKKKQIPTWS-- 55

Query: 59  SLSTGVKYACVGQSGLESASSFPMISNVLANPAAAEVAVSSEQKVYDVVLKQASLIKRKL 118
             S+ V+           +    ++S+ L    + E+A+SSE+KVY+VVLKQA+L+ ++L
Sbjct: 56  --SSFVR---------NRSRRIGVVSSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQL 104

Query: 119 --SAGDHGVK--QNVFLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAI 174
             S+ D  VK  Q+V LPG+LSLL EAYDRCGE+CAEYAKTFYLGTLLMTPERR+AIWAI
Sbjct: 105 RSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAI 164

Query: 175 YVWCRRTDELVDGPNASHITPTALDRWESRLEELFQGRPFDMLDAAVSDTVTKFPVDIQP 234
           YVWCRRTDELVDGPNASHITP ALDRWE+RLE+LF+GRPFDMLDAA++DTV ++PVDIQP
Sbjct: 165 YVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQP 224

Query: 235 FKDMIEGMRTDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGISPDSQTSTESVYNAAL 294
           F+DMIEGMR DL+KSRY+NFD+LYLYCYYVAGTVGLMSVP+MGI P S+ +TESVYNAAL
Sbjct: 225 FRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAAL 284

Query: 295 ALGIANQLTNILRDVGEDASRGRVYLPQDELAQAGLSEDDIFAGKVTDKWRNFMKSQIKR 354
           ALGIANQLTNILRDVGEDA RGRVYLPQDELAQAGLS++DIFAGKVTDKWRNFMK Q+KR
Sbjct: 285 ALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKR 344

Query: 355 ARMFFDEAEKGVMELNKASRWPVLASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSL 414
           ARMFFDEAEKGV EL+ ASRWPV ASLLLYR+ILDEIEANDYNNFTKRAYV K KK+ +L
Sbjct: 345 ARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAAL 404

Query: 415 PAAYARTMV 423
           P AYA++++
Sbjct: 405 PLAYAKSVL 413


>AT5G17230.3 | Symbols: PSY | PHYTOENE SYNTHASE |
           chr5:5659839-5662087 REVERSE LENGTH=437
          Length = 437

 Score =  570 bits (1470), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 293/444 (65%), Positives = 347/444 (78%), Gaps = 41/444 (9%)

Query: 2   SVTLFWVA-SFPNLQVSNSTRLLDSIRDVRLFDSSKFMS--RDFRSIRAKKDRKKRWRFC 58
           SV + WVA S  N    N+  L      VR+ +SS+  S  ++ R  + KK +   W   
Sbjct: 4   SVAVLWVATSSLNPDPMNNCGL------VRVLESSRLFSPCQNQRLNKGKKKQIPTWS-- 55

Query: 59  SLSTGVKYACVGQSGLESASSFPMISNVLANPAAAEVAVSSEQKVYDVVLKQASLIKRKL 118
             S+ V+           +    ++S+ L    + E+A+SSE+KVY+VVLKQA+L+ ++L
Sbjct: 56  --SSFVR---------NRSRRIGVVSSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQL 104

Query: 119 --SAGDHGVK--QNVFLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAI 174
             S+ D  VK  Q+V LPG+LSLL EAYDRCGE+CAEYAKTFYLGTLLMTPERR+AIWAI
Sbjct: 105 RSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAI 164

Query: 175 YV---------------WCRRTDELVDGPNASHITPTALDRWESRLEELFQGRPFDMLDA 219
           YV               WCRRTDELVDGPNASHITP ALDRWE+RLE+LF+GRPFDMLDA
Sbjct: 165 YVMLKVDFYKQSIVALVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDA 224

Query: 220 AVSDTVTKFPVDIQPFKDMIEGMRTDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIS 279
           A++DTV ++PVDIQPF+DMIEGMR DL+KSRY+NFD+LYLYCYYVAGTVGLMSVP+MGI 
Sbjct: 225 ALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGID 284

Query: 280 PDSQTSTESVYNAALALGIANQLTNILRDVGEDASRGRVYLPQDELAQAGLSEDDIFAGK 339
           P S+ +TESVYNAALALGIANQLTNILRDVGEDA RGRVYLPQDELAQAGLS++DIFAGK
Sbjct: 285 PKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGK 344

Query: 340 VTDKWRNFMKSQIKRARMFFDEAEKGVMELNKASRWPVLASLLLYRQILDEIEANDYNNF 399
           VTDKWRNFMK Q+KRARMFFDEAEKGV EL+ ASRWPV ASLLLYR+ILDEIEANDYNNF
Sbjct: 345 VTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNF 404

Query: 400 TKRAYVSKTKKLLSLPAAYARTMV 423
           TKRAYV K KK+ +LP AYA++++
Sbjct: 405 TKRAYVGKVKKIAALPLAYAKSVL 428