Miyakogusa Predicted Gene

Lj2g3v2507850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2507850.1 Non Chatacterized Hit- tr|G4ZNZ3|G4ZNZ3_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,23.77,3e-18,no
description,NULL; no description,Rubisco LS methyltransferase,
substrate-binding domain; SET doma,CUFF.39012.1
         (490 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17240.1 | Symbols: SDG40 | SET domain group 40 | chr5:566685...   568   e-162
AT3G55080.1 | Symbols:  | SET domain-containing protein | chr3:2...    71   2e-12
AT3G07670.1 | Symbols:  | Rubisco methyltransferase family prote...    69   8e-12
AT2G18850.1 | Symbols:  | SET domain-containing protein | chr2:8...    63   6e-10
AT2G18850.2 | Symbols:  | SET domain-containing protein | chr2:8...    63   6e-10
AT3G56570.1 | Symbols:  | SET domain-containing protein | chr3:2...    55   1e-07

>AT5G17240.1 | Symbols: SDG40 | SET domain group 40 |
           chr5:5666854-5668849 FORWARD LENGTH=491
          Length = 491

 Score =  568 bits (1464), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/500 (56%), Positives = 371/500 (74%), Gaps = 29/500 (5%)

Query: 1   MEQQQGSLESFLSWAAQLGISDSTNTDQPQHSLSCLGHSLCVSLFPHSGGRGLGAVRDLR 60
           M+ +  ++E+FL WAA++GISDS   D  +   SCLGHSL VS FP +GGRGLGA R+L+
Sbjct: 1   MDLEHQTMETFLRWAAEIGISDSI--DSSRFRDSCLGHSLSVSDFPDAGGRGLGAARELK 58

Query: 61  RGEIILRVPKSALMTTESVM-EDNKLCLAVNKHSSLSSTQILSVCLLYEMGKGKTSRWHP 119
           +GE++L+VP+ ALMTTES++ +D KL  AVN H+SLSSTQILSVCLLYEM K K S W+P
Sbjct: 59  KGELVLKVPRKALMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFWYP 118

Query: 120 YLMHLPQSYDVLATFGEFEKQALQVDEAMWVTEKAVLKAKSEWKEAHALMDDLMFKPRLL 179
           YL H+P+ YD+LATFG FEKQALQV++A+W TEKA  K +SEWKEA +LM +L  KP+  
Sbjct: 119 YLFHIPRDYDLLATFGNFEKQALQVEDAVWATEKATAKCQSEWKEAGSLMKELELKPKFR 178

Query: 180 TFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGE---EPSGIEEVEHFLSDSS 236
           +F+AW+WA+ATISSRTLH+PWD AGCLCPVGDLFNYDAPG+    P G E          
Sbjct: 179 SFQAWLWASATISSRTLHVPWDSAGCLCPVGDLFNYDAPGDYSNTPQGPESA-------- 230

Query: 237 IHVDVSKEDNIMVDAEKIDSHSQRLTDGGFDEDANAYCFYARENYKKGDQVLLCYGTYTN 296
                   +N+      +++HS+RLTDGGF+ED NAYC YAR NY+ G+QVLLCYGTYTN
Sbjct: 231 --------NNVEEAGLVVETHSERLTDGGFEEDVNAYCLYARRNYQLGEQVLLCYGTYTN 282

Query: 297 LELLEHYGFLLPENPNDKICIPLEPAIYS-STSWSKESLYIHQNGKPSFALLAALRLWAT 355
           LELLEHYGF+L EN NDK+ IPLE +++S ++SW K+SLYIHQ+GK SFAL++ LRLW  
Sbjct: 283 LELLEHYGFMLEENSNDKVFIPLETSLFSLASSWPKDSLYIHQDGKLSFALISTLRLWLI 342

Query: 356 PQNKR-RSVGHLAYSGSQLSADNEVFIMKWLLKACGAVLKNLPTSIEDDNLLMNAIDS-Q 413
           PQ++R +SV  L Y+GSQ+S  NE+ +MKW+ + CG+VL++LPTS+ +D +L++ ID  Q
Sbjct: 343 PQSQRDKSVMRLVYAGSQISVKNEILVMKWMSEKCGSVLRDLPTSVTEDTVLLHNIDKLQ 402

Query: 414 D--IFMEFTKLMSSRDEVDTFLEAHDIKDAHGCTDTLL--SRKARRSMDRWRLAVQWRLR 469
           D  + +E  +  +   EV  FL+A+ + D    +   +  SRK  R + +WR +VQWRL 
Sbjct: 403 DPELRLEQKETEAFGSEVRAFLDANCLWDVTVLSGKPIEFSRKTSRMLSKWRWSVQWRLS 462

Query: 470 YKKVLVDCISYCNEKLNSLM 489
           YK+ L DCISYCNEK+N+L+
Sbjct: 463 YKRTLADCISYCNEKMNNLL 482


>AT3G55080.1 | Symbols:  | SET domain-containing protein |
           chr3:20411476-20415830 REVERSE LENGTH=463
          Length = 463

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 70/324 (21%)

Query: 3   QQQGSLES-FLSWAAQLGISDSTNTDQPQHSLSCLGHSLCVSLFPHSGGRGLGAVRDLRR 61
           Q Q SL++ FL W  ++  +  TNT               +S+   + GR L A + +  
Sbjct: 37  QTQASLDNNFLPWLERIAGAKITNT---------------LSIGKSTYGRSLFASKVIYA 81

Query: 62  GEIILRVPKSALMTTESVMEDNKLCLAVNKHSSLSSTQILSVCLLYEMGKGKTSRWHPYL 121
           G+ +L+VP +A +T + +  D ++ L+    + + +  +L+  L+ E   G+ SRW PY+
Sbjct: 82  GDCMLKVPFNAQITPDELPSDIRVLLS----NEVGNIGMLAAVLIREKKMGQKSRWVPYI 137

Query: 122 MHLPQSYDVLATF--GEFEKQALQVDEAMWVTEKAVLKAKSEWK-EAHALMDDLMFKPRL 178
             LPQ  ++ ++   GE E   ++       T K   + + ++   A A           
Sbjct: 138 SRLPQPAEMHSSIFWGEDELSMIRCSAVHQETVKQKAQIEKDFSFVAQAFKQHCPIVTER 197

Query: 179 LTFKAWVWAAATISSRTLHIPWDEAG--CLCPVGDLFNYDAPGEEPSGIEEVEHFLSDSS 236
              + +++A A + SR     W+ +    L P  D  N+D               LS S 
Sbjct: 198 PDLEDFMYAYALVGSRA----WENSKRISLIPFADFMNHDG--------------LSASI 239

Query: 237 IHVDVSKEDNIMVDAEKIDSHSQRLTDGGFDEDANAYCFYARENYKKGDQVLLCYGTYTN 296
           +  D   EDN + +                          A  NY  GD+V + YG ++N
Sbjct: 240 VLRD---EDNQLSEVT------------------------ADRNYSPGDEVFIKYGEFSN 272

Query: 297 LELLEHYGFLLPENPNDKICIPLE 320
             L+  +GF  P N +D++ I ++
Sbjct: 273 ATLMLDFGFTFPYNIHDEVQIQMD 296


>AT3G07670.1 | Symbols:  | Rubisco methyltransferase family protein
           | chr3:2451651-2454617 FORWARD LENGTH=504
          Length = 504

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 63/285 (22%)

Query: 49  GGRGLGAVRDLRRGEIILRVPKSALMTTESVMEDNKLCLAVNKHSSLSSTQILSVCLLYE 108
           G RGL A ++LR+GE +L VP S +++ +S    N     V K   +    +L+  L+ E
Sbjct: 99  GERGLVASQNLRKGEKLLFVPPSLVISADSEW-TNAEAGEVMKRYDVPDWPLLATYLISE 157

Query: 109 MGKGKTSRWHPYLMHLP-QSYDVLA-TFGEFEKQALQVDEAMWVTEKAVLKAKSEWKEAH 166
               K+SRW  Y+  LP Q Y +L  T  E +       EA  + E+A+ +  +      
Sbjct: 158 ASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYL----EASQIRERAIERITNVVGTYE 213

Query: 167 ALMDDLMFK-PRLL--------TFKAWVWAAATISSRTLHIP-WDEAGCLCPVGDLFNYD 216
            L   +  K P+L         TFK   W+   + SR + +P  D    L P  D+ N++
Sbjct: 214 DLRSRIFSKHPQLFPKEVFNDETFK---WSFGILFSRLVRLPSMDGRFALVPWADMLNHN 270

Query: 217 APGEEPSGIEEVEHFLSDSSIHVDVSKEDNIMVDAEKIDSHSQRLTDGGFDEDANAYCFY 276
                     EVE FL                                 +D+ +    F 
Sbjct: 271 C---------EVETFLD--------------------------------YDKSSKGVVFT 289

Query: 277 ARENYKKGDQVLLCYGTYTNLELLEHYGFLLPE--NPNDKICIPL 319
               Y+ G+QV + YG  +N ELL  YGF+  E  NP+D + + L
Sbjct: 290 TDRPYQPGEQVFISYGNKSNGELLLSYGFVPREGTNPSDSVELAL 334


>AT2G18850.1 | Symbols:  | SET domain-containing protein |
           chr2:8160788-8163479 FORWARD LENGTH=543
          Length = 543

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 59/282 (20%)

Query: 50  GRGLGAVRDLRRGEIILRVPKSALMTTESVMEDNKLCLAVNKHSSLSSTQILSVCLLYEM 109
           GRG  A  DL+ G++ L +P S++++ E V  ++ +   +     ++S  +L   LL+ M
Sbjct: 175 GRGAIASEDLKFGDVALEIPVSSIISEEYVY-NSDMYPILETFDGITSETML---LLWTM 230

Query: 110 GKGKT--SRWHPYLMHLPQSYDVLATFGEFEKQALQVDEAMWVTEKAVLKAKSEWKEAHA 167
            +     S++ PY   L +++    +FG      +++D  + + E  +++AK   +E + 
Sbjct: 231 REKHNLDSKFKPYFDSLQENFCTGLSFG--VDAIMELDGTLLLDE--IMQAKELLRERYD 286

Query: 168 LMDDLM------FKPRLLTFKAWVWAAATISSRTLHIPWDEA---GCLCPVGDLFNYDAP 218
            +  L+      F P L T++ ++WA     S ++ I + +     CL PV    N+   
Sbjct: 287 ELIPLLSNHREVFPPELYTWEHYLWACELYYSNSMQIKFPDGKLKTCLIPVAGFLNH--- 343

Query: 219 GEEPSGIEEVEHFLSDSSIHVDVSKEDNIMVDAEKIDSHSQRLTDGGFDEDANAYCFYAR 278
                            SI+  + K                    G  D + ++  F   
Sbjct: 344 -----------------SIYPHIVKY-------------------GKVDIETSSLKFPVS 367

Query: 279 ENYKKGDQVLLCYGTYTNLELLEHYGFLLPENPNDKICIPLE 320
               KG+Q  L YG Y++  LL  YGF LP+  N    IPL+
Sbjct: 368 RPCNKGEQCFLSYGNYSSSHLLTFYGF-LPKGDNPYDVIPLD 408


>AT2G18850.2 | Symbols:  | SET domain-containing protein |
           chr2:8160788-8163479 FORWARD LENGTH=536
          Length = 536

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 59/282 (20%)

Query: 50  GRGLGAVRDLRRGEIILRVPKSALMTTESVMEDNKLCLAVNKHSSLSSTQILSVCLLYEM 109
           GRG  A  DL+ G++ L +P S++++ E V  ++ +   +     ++S  +L   LL+ M
Sbjct: 175 GRGAIASEDLKFGDVALEIPVSSIISEEYVY-NSDMYPILETFDGITSETML---LLWTM 230

Query: 110 GKGKT--SRWHPYLMHLPQSYDVLATFGEFEKQALQVDEAMWVTEKAVLKAKSEWKEAHA 167
            +     S++ PY   L +++    +FG      +++D  + + E  +++AK   +E + 
Sbjct: 231 REKHNLDSKFKPYFDSLQENFCTGLSFG--VDAIMELDGTLLLDE--IMQAKELLRERYD 286

Query: 168 LMDDLM------FKPRLLTFKAWVWAAATISSRTLHIPWDEA---GCLCPVGDLFNYDAP 218
            +  L+      F P L T++ ++WA     S ++ I + +     CL PV    N+   
Sbjct: 287 ELIPLLSNHREVFPPELYTWEHYLWACELYYSNSMQIKFPDGKLKTCLIPVAGFLNH--- 343

Query: 219 GEEPSGIEEVEHFLSDSSIHVDVSKEDNIMVDAEKIDSHSQRLTDGGFDEDANAYCFYAR 278
                            SI+  + K                    G  D + ++  F   
Sbjct: 344 -----------------SIYPHIVKY-------------------GKVDIETSSLKFPVS 367

Query: 279 ENYKKGDQVLLCYGTYTNLELLEHYGFLLPENPNDKICIPLE 320
               KG+Q  L YG Y++  LL  YGF LP+  N    IPL+
Sbjct: 368 RPCNKGEQCFLSYGNYSSSHLLTFYGF-LPKGDNPYDVIPLD 408


>AT3G56570.1 | Symbols:  | SET domain-containing protein |
           chr3:20958660-20961137 FORWARD LENGTH=531
          Length = 531

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 124/334 (37%), Gaps = 66/334 (19%)

Query: 50  GRGLGAVRDLRRGEIILRVPKSALMTTESVMEDNKLCLAVNKHSSLSSTQILSVCLLYEM 109
           G  + A  DL+ G+++  + K+A +T ++      +     + + L  +  LSV L+YE 
Sbjct: 33  GVSVRAFCDLKEGDVVANISKTACLTIKTSGAREMI-----ESADLDGSLGLSVALMYER 87

Query: 110 GKGKTSRWHPYLMHLPQSYDVLATFGEFEKQALQVDEAM--WVTEKAVLKAKSEWKEAHA 167
             G+ S W  YL  LP   D+   +   +  +L     +   V E  VL    +WKE   
Sbjct: 88  SLGEESPWAGYLQILPIQEDLPLVWSLEDLDSLLSGTELHKLVKEDHVL-IYEDWKENIL 146

Query: 168 LMDDLM---FKPRLLTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEPSG 224
            +   +           K ++ A + I+SR+  I       + P+ DLFN+       +G
Sbjct: 147 PLTSSLPQNVDSDSFGIKEYLAAKSLIASRSFEIDDYHGSGMVPLADLFNH------KTG 200

Query: 225 IEEVEHFLSDSSIHVDVSKEDNIMVDAEKIDSHSQRLT---DGGFDE------------- 268
            E+V HF  +S    D S  D+   +    D  S +++   +  F+E             
Sbjct: 201 AEDV-HFTHESDSEADESDNDDAANETTDEDEPSSKISSSPEQSFEEVPGENTDDEAKEE 259

Query: 269 ----------------------------DANAYCFYARENYKKGDQVLLCYGTYTNLELL 300
                                       D +       ++   G +V   YG   N  LL
Sbjct: 260 EEEEEEEEEGEEEEEGEEEEENSSMLQNDQSGLKMIMVKDVSAGAEVFNTYGLMGNAALL 319

Query: 301 EHYGFLLPENPNDKICIPLEPAIYSSTSWSKESL 334
             YGF   +NP D + I LE      T WS  S 
Sbjct: 320 HRYGFTELDNPYDIVNIDLELV----TEWSTSSF 349