Miyakogusa Predicted Gene

Lj2g3v2506760.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2506760.1 Non Chatacterized Hit- tr|B9HT98|B9HT98_POPTR
Putative uncharacterized protein (Fragment)
OS=Populus,44.44,3e-18,FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL,gene.g43427.t1.1
         (697 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01810.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   318   6e-87
AT3G01810.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   318   6e-87
AT3G01810.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   318   7e-87
AT2G42320.2 | Symbols:  | nucleolar protein gar2-related | chr2:...   250   2e-66
AT2G42320.1 | Symbols:  | nucleolar protein gar2-related | chr2:...   250   2e-66
AT5G43230.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   245   8e-65
AT3G57780.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   240   2e-63
AT5G06930.1 | Symbols:  | LOCATED IN: chloroplast; EXPRESSED IN:...   181   2e-45

>AT3G01810.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; EXPRESSED IN:
           21 plant structures; EXPRESSED DURING: 13 growth stages;
           BEST Arabidopsis thaliana protein match is: nucleolar
           protein gar2-related (TAIR:AT2G42320.2). |
           chr3:289218-292557 FORWARD LENGTH=921
          Length = 921

 Score =  318 bits (816), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 171/332 (51%), Positives = 211/332 (63%), Gaps = 45/332 (13%)

Query: 382 EKLKYVKSVRSSADIARSISLGSNHHAEVKENGFNGDAQNSGGNIRSSDKREAKIYPREA 441
           EK + VKSVRSS DI RS S  S                        S+++EAK+YP   
Sbjct: 361 EKSRKVKSVRSSLDINRSNSRLSLF----------------------SERKEAKVYPNST 398

Query: 442 RNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVAEHGSSMGKVHAPARRLSRLYLH 501
            +  L+SK+++LES++K LEGEL EAAAIEA+LYSVVAEHGSS  KVHAPARRL RLYLH
Sbjct: 399 HDTTLESKIKNLESRVKKLEGELCEAAAIEAALYSVVAEHGSSSSKVHAPARRLLRLYLH 458

Query: 502 ACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVAPSN 561
           AC+E   +RR+ AA+SA+SGLVLVAKACGNDVPRLTFWLSN+IVLRTIIS T+ +     
Sbjct: 459 ACRETHLSRRANAAESAVSGLVLVAKACGNDVPRLTFWLSNTIVLRTIISDTSAEEELPV 518

Query: 562 PAVSSTRRKSGEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNWDDPNVFTSALEKVEAW 621
            A    R++  E   +   SL WK     K      +    G WDDP  F +ALEKVEAW
Sbjct: 519 SAGPGPRKQKAERETEKRSSLKWKDSPLSKK-----DIKSFGAWDDPVTFITALEKVEAW 573

Query: 622 LFSRIVESIWWQSLTPHMQ------------------KSYTKMSGTCDQDLGNLSLDIWK 663
           +FSR+VESIWWQ+LTP MQ                  K++ +   + +Q+LG+ SL++WK
Sbjct: 574 IFSRVVESIWWQTLTPRMQSSAASTREFDKGNGSASKKTFGRTPSSTNQELGDFSLELWK 633

Query: 664 NAFREACERICPLRAGRHECGCLSVLPRLFNE 695
            AFREA ER+CPLR   HECGCL +  RL  E
Sbjct: 634 KAFREAHERLCPLRGSGHECGCLPIPARLIME 665



 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 97/140 (69%), Gaps = 3/140 (2%)

Query: 10  VFQRNCLEFNLYEPRRDKIVKGQLLATAIVDLADCGILRETLSISAPLNCKRSYRNTDQS 69
           VF +N LE NLYEPRR+K    QLLATA +DLA  G+++E+ S++A +N KRSYRN  Q 
Sbjct: 96  VFFKNVLELNLYEPRREKT--HQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQP 153

Query: 70  FLFIKIEPVEKNRARPSLKDRLSKD-NNGSDSVSALMNGEYAEEAEIASFTDDDVSSHSS 128
            L++ I+PV + RA  S  + L  +  NG +SVSALMN EY +EAEIAS TDDD+SSHSS
Sbjct: 154 VLYLTIQPVSRRRASSSSMNSLKDEAKNGGESVSALMNEEYYKEAEIASITDDDISSHSS 213

Query: 129 LAAITTSPESSGCMPREHEE 148
           L   +++ ES+G      EE
Sbjct: 214 LTVSSSTLESNGGFSVRTEE 233


>AT3G01810.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           plasma membrane; EXPRESSED IN: 21 plant structures;
           EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
           thaliana protein match is: nucleolar protein
           gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to
           470 proteins in 132 species: Archae - 2; Bacteria - 131;
           Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0;
           Other Eukaryotes - 827 (source: NCBI BLink). |
           chr3:289218-292557 FORWARD LENGTH=921
          Length = 921

 Score =  318 bits (816), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 171/332 (51%), Positives = 211/332 (63%), Gaps = 45/332 (13%)

Query: 382 EKLKYVKSVRSSADIARSISLGSNHHAEVKENGFNGDAQNSGGNIRSSDKREAKIYPREA 441
           EK + VKSVRSS DI RS S  S                        S+++EAK+YP   
Sbjct: 361 EKSRKVKSVRSSLDINRSNSRLSLF----------------------SERKEAKVYPNST 398

Query: 442 RNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVAEHGSSMGKVHAPARRLSRLYLH 501
            +  L+SK+++LES++K LEGEL EAAAIEA+LYSVVAEHGSS  KVHAPARRL RLYLH
Sbjct: 399 HDTTLESKIKNLESRVKKLEGELCEAAAIEAALYSVVAEHGSSSSKVHAPARRLLRLYLH 458

Query: 502 ACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVAPSN 561
           AC+E   +RR+ AA+SA+SGLVLVAKACGNDVPRLTFWLSN+IVLRTIIS T+ +     
Sbjct: 459 ACRETHLSRRANAAESAVSGLVLVAKACGNDVPRLTFWLSNTIVLRTIISDTSAEEELPV 518

Query: 562 PAVSSTRRKSGEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNWDDPNVFTSALEKVEAW 621
            A    R++  E   +   SL WK     K      +    G WDDP  F +ALEKVEAW
Sbjct: 519 SAGPGPRKQKAERETEKRSSLKWKDSPLSKK-----DIKSFGAWDDPVTFITALEKVEAW 573

Query: 622 LFSRIVESIWWQSLTPHMQ------------------KSYTKMSGTCDQDLGNLSLDIWK 663
           +FSR+VESIWWQ+LTP MQ                  K++ +   + +Q+LG+ SL++WK
Sbjct: 574 IFSRVVESIWWQTLTPRMQSSAASTREFDKGNGSASKKTFGRTPSSTNQELGDFSLELWK 633

Query: 664 NAFREACERICPLRAGRHECGCLSVLPRLFNE 695
            AFREA ER+CPLR   HECGCL +  RL  E
Sbjct: 634 KAFREAHERLCPLRGSGHECGCLPIPARLIME 665



 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 97/140 (69%), Gaps = 3/140 (2%)

Query: 10  VFQRNCLEFNLYEPRRDKIVKGQLLATAIVDLADCGILRETLSISAPLNCKRSYRNTDQS 69
           VF +N LE NLYEPRR+K    QLLATA +DLA  G+++E+ S++A +N KRSYRN  Q 
Sbjct: 96  VFFKNVLELNLYEPRREKT--HQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQP 153

Query: 70  FLFIKIEPVEKNRARPSLKDRLSKD-NNGSDSVSALMNGEYAEEAEIASFTDDDVSSHSS 128
            L++ I+PV + RA  S  + L  +  NG +SVSALMN EY +EAEIAS TDDD+SSHSS
Sbjct: 154 VLYLTIQPVSRRRASSSSMNSLKDEAKNGGESVSALMNEEYYKEAEIASITDDDISSHSS 213

Query: 129 LAAITTSPESSGCMPREHEE 148
           L   +++ ES+G      EE
Sbjct: 214 LTVSSSTLESNGGFSVRTEE 233


>AT3G01810.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           plasma membrane; EXPRESSED IN: 21 plant structures;
           EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
           thaliana protein match is: nucleolar protein
           gar2-related (TAIR:AT2G42320.2); Has 1232 Blast hits to
           443 proteins in 120 species: Archae - 2; Bacteria - 119;
           Metazoa - 136; Fungi - 117; Plants - 114; Viruses - 0;
           Other Eukaryotes - 744 (source: NCBI BLink). |
           chr3:289218-292375 FORWARD LENGTH=859
          Length = 859

 Score =  318 bits (816), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 171/332 (51%), Positives = 211/332 (63%), Gaps = 45/332 (13%)

Query: 382 EKLKYVKSVRSSADIARSISLGSNHHAEVKENGFNGDAQNSGGNIRSSDKREAKIYPREA 441
           EK + VKSVRSS DI RS S  S                        S+++EAK+YP   
Sbjct: 361 EKSRKVKSVRSSLDINRSNSRLSLF----------------------SERKEAKVYPNST 398

Query: 442 RNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVAEHGSSMGKVHAPARRLSRLYLH 501
            +  L+SK+++LES++K LEGEL EAAAIEA+LYSVVAEHGSS  KVHAPARRL RLYLH
Sbjct: 399 HDTTLESKIKNLESRVKKLEGELCEAAAIEAALYSVVAEHGSSSSKVHAPARRLLRLYLH 458

Query: 502 ACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVAPSN 561
           AC+E   +RR+ AA+SA+SGLVLVAKACGNDVPRLTFWLSN+IVLRTIIS T+ +     
Sbjct: 459 ACRETHLSRRANAAESAVSGLVLVAKACGNDVPRLTFWLSNTIVLRTIISDTSAEEELPV 518

Query: 562 PAVSSTRRKSGEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNWDDPNVFTSALEKVEAW 621
            A    R++  E   +   SL WK     K      +    G WDDP  F +ALEKVEAW
Sbjct: 519 SAGPGPRKQKAERETEKRSSLKWKDSPLSKK-----DIKSFGAWDDPVTFITALEKVEAW 573

Query: 622 LFSRIVESIWWQSLTPHMQ------------------KSYTKMSGTCDQDLGNLSLDIWK 663
           +FSR+VESIWWQ+LTP MQ                  K++ +   + +Q+LG+ SL++WK
Sbjct: 574 IFSRVVESIWWQTLTPRMQSSAASTREFDKGNGSASKKTFGRTPSSTNQELGDFSLELWK 633

Query: 664 NAFREACERICPLRAGRHECGCLSVLPRLFNE 695
            AFREA ER+CPLR   HECGCL +  RL  E
Sbjct: 634 KAFREAHERLCPLRGSGHECGCLPIPARLIME 665



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 98/143 (68%), Gaps = 9/143 (6%)

Query: 10  VFQRNCLEFNLYEPRRDKIVKGQLLATAIVDLADCGILRETLSISAPLNCKRSYRNTDQS 69
           VF +N LE NLYEPRR+K    QLLATA +DLA  G+++E+ S++A +N KRSYRN  Q 
Sbjct: 96  VFFKNVLELNLYEPRREKT--HQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQP 153

Query: 70  FLFIKIEPVEKNRARP----SLKDRLSKDNNGSDSVSALMNGEYAEEAEIASFTDDDVSS 125
            L++ I+PV + RA      SLKD   +  NG +SVSALMN EY +EAEIAS TDDD+SS
Sbjct: 154 VLYLTIQPVSRRRASSSSMNSLKD---EAKNGGESVSALMNEEYYKEAEIASITDDDISS 210

Query: 126 HSSLAAITTSPESSGCMPREHEE 148
           HSSL   +++ ES+G      EE
Sbjct: 211 HSSLTVSSSTLESNGGFSVRTEE 233


>AT2G42320.2 | Symbols:  | nucleolar protein gar2-related |
           chr2:17628102-17630657 FORWARD LENGTH=669
          Length = 669

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/285 (46%), Positives = 171/285 (60%), Gaps = 41/285 (14%)

Query: 420 QNSGGNIRSSDKREAKIYPREARNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVA 479
           +N+GGN       E               K+E LE++I+ LE ELRE AA+E SLYSVV 
Sbjct: 162 ENNGGNFEDGSSEE---------------KIERLETRIEKLEEELREVAALEISLYSVVP 206

Query: 480 EHGSSMGKVHAPARRLSRLYLHACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFW 539
           +H SS  K+H PARR+SR+Y+HACK   Q +R+  A++++SGLVLVAK+CGNDV RLTFW
Sbjct: 207 DHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLVLVAKSCGNDVSRLTFW 266

Query: 540 LSNSIVLRTIISKTTKDVAPSNPAVSSTRRKSGEGNGKIAQSLIWK-GYSHKKSENTAIE 598
           LSN I LR IIS+       S     S   +SG  +     +L WK G+           
Sbjct: 267 LSNIIALRQIISQA---FGRSRITQISEPNESGNSDSGKKTNLRWKNGFQQL-------- 315

Query: 599 FGGIGNWDDPNVFTSALEKVEAWLFSRIVESIWWQSLTPHMQ---------KSYTKMSGT 649
              + +W +   FT+ALEK+E W+FSRIVES+WWQ  TPHMQ         KS  K+ G 
Sbjct: 316 ---LEDWQETETFTTALEKIEFWVFSRIVESVWWQVFTPHMQSPEDDSSASKSNGKLMGP 372

Query: 650 C--DQDLGNLSLDIWKNAFREACERICPLRAGRHECGCLSVLPRL 692
              DQ+ G  S+ +WKNAFR+A +RICP+R   HECGCL VL R+
Sbjct: 373 SLGDQNQGTFSISLWKNAFRDALQRICPMRGAGHECGCLPVLARM 417


>AT2G42320.1 | Symbols:  | nucleolar protein gar2-related |
           chr2:17628102-17630657 FORWARD LENGTH=669
          Length = 669

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/285 (46%), Positives = 171/285 (60%), Gaps = 41/285 (14%)

Query: 420 QNSGGNIRSSDKREAKIYPREARNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVA 479
           +N+GGN       E               K+E LE++I+ LE ELRE AA+E SLYSVV 
Sbjct: 162 ENNGGNFEDGSSEE---------------KIERLETRIEKLEEELREVAALEISLYSVVP 206

Query: 480 EHGSSMGKVHAPARRLSRLYLHACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFW 539
           +H SS  K+H PARR+SR+Y+HACK   Q +R+  A++++SGLVLVAK+CGNDV RLTFW
Sbjct: 207 DHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLVLVAKSCGNDVSRLTFW 266

Query: 540 LSNSIVLRTIISKTTKDVAPSNPAVSSTRRKSGEGNGKIAQSLIWK-GYSHKKSENTAIE 598
           LSN I LR IIS+       S     S   +SG  +     +L WK G+           
Sbjct: 267 LSNIIALRQIISQA---FGRSRITQISEPNESGNSDSGKKTNLRWKNGFQQL-------- 315

Query: 599 FGGIGNWDDPNVFTSALEKVEAWLFSRIVESIWWQSLTPHMQ---------KSYTKMSGT 649
              + +W +   FT+ALEK+E W+FSRIVES+WWQ  TPHMQ         KS  K+ G 
Sbjct: 316 ---LEDWQETETFTTALEKIEFWVFSRIVESVWWQVFTPHMQSPEDDSSASKSNGKLMGP 372

Query: 650 C--DQDLGNLSLDIWKNAFREACERICPLRAGRHECGCLSVLPRL 692
              DQ+ G  S+ +WKNAFR+A +RICP+R   HECGCL VL R+
Sbjct: 373 SLGDQNQGTFSISLWKNAFRDALQRICPMRGAGHECGCLPVLARM 417


>AT5G43230.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G01810.3); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:17349125-17352747 FORWARD LENGTH=848
          Length = 848

 Score =  245 bits (625), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 126/253 (49%), Positives = 161/253 (63%), Gaps = 47/253 (18%)

Query: 454 ESKIKMLEGELREAAAIEASLYSVVAEHGSSMGKVHAPARRLSRLYLHACKEN--IQARR 511
           +SK + LE EL+EAA +EA++YSVVAEH SSM KVHAPARRL+R YLHACK N    ++R
Sbjct: 365 DSKTETLEDELKEAAVLEAAIYSVVAEHTSSMSKVHAPARRLARFYLHACKGNGSDHSKR 424

Query: 512 SGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVAPSNPAVSSTRRKS 571
           + AA++A+SGL+LV+KACGNDVPRLTFWLSNSIVLR I+S+                   
Sbjct: 425 ATAARAAVSGLILVSKACGNDVPRLTFWLSNSIVLRAILSR------------------- 465

Query: 572 GEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNWDDPNVFTSALEKVEAWLFSRIVESIW 631
           G    KI                   E  G   W+DP  F +ALEK E+W+FSR+V+S+W
Sbjct: 466 GMEKMKIVP-----------------EKAGSDEWEDPRAFLAALEKFESWIFSRVVKSVW 508

Query: 632 WQSLTPHMQKSYT------KMSG---TCDQDLGNLSLDIWKNAFREACERICPLRAGRHE 682
           WQS+TPHMQ          K+SG      ++ G  ++++WKNAFR ACER+CPLR  R E
Sbjct: 509 WQSMTPHMQSPAVKGSIARKVSGKRRLGHRNQGLYAIELWKNAFRAACERLCPLRGSRQE 568

Query: 683 CGCLSVLPRLFNE 695
           CGCL +L +L  E
Sbjct: 569 CGCLPMLAKLVME 581


>AT3G57780.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: nucleolar protein gar2-related (TAIR:AT2G42320.2);
           Has 3163 Blast hits to 2460 proteins in 357 species:
           Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335;
           Plants - 248; Viruses - 72; Other Eukaryotes - 1360
           (source: NCBI BLink). | chr3:21399766-21402329 REVERSE
           LENGTH=671
          Length = 671

 Score =  240 bits (613), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 175/287 (60%), Gaps = 16/287 (5%)

Query: 414 GFNGDAQNSGGNIRSSDKREAKIYPREARNNILDSKVEHLESKIKMLEGELREAAAIEAS 473
           G +G ++N  G+++  ++        E    +L   VE LE++++ LE ELRE AA+E S
Sbjct: 139 GLSGGSENEAGDVKEKNEN------FEEDEEMLKQMVETLETRVEKLEEELREVAALEIS 192

Query: 474 LYSVVAEHGSSMGKVHAPARRLSRLYLHACKENIQARRSGAAKSAISGLVLVAKACGNDV 533
           LYSVV +H SS  K+H PARR+SR+Y+HACK   Q +R+  A++++SGL+L AK+CGNDV
Sbjct: 193 LYSVVPDHSSSAHKLHTPARRISRIYIHACKHWSQGKRATVARNSVSGLILAAKSCGNDV 252

Query: 534 PRLTFWLSNSIVLRTIISKTT-KDVAPSNPAVSSTRRKSGEGNGKIAQSLIWKGYSHKKS 592
            RLTFWLSN I LR II +   K   PS+   + T   +G  +  + +    K    K+S
Sbjct: 253 SRLTFWLSNIISLREIILQAFGKTSVPSH--FTETSASNGSEHNVLGKVRRKKNQWTKQS 310

Query: 593 ENTAIEFGGIGNWDDPNVFTSALEKVEAWLFSRIVESIWWQSLTPHMQK----SYTKMSG 648
                 F    +W +   FT+ALEKVE W+FSRIVES+WWQ  TPHMQ       TK   
Sbjct: 311 NGFKQVF---EDWQESQTFTAALEKVEFWIFSRIVESVWWQVFTPHMQSPENGGKTKEHI 367

Query: 649 TCDQDLGNLSLDIWKNAFREACERICPLRAGRHECGCLSVLPRLFNE 695
             D + G+ S+ +WKNAF+    R+CP+R  RHECGCL +L ++  E
Sbjct: 368 LGDIEQGSFSISLWKNAFKVTLSRLCPMRGARHECGCLPILAKMVME 414


>AT5G06930.1 | Symbols:  | LOCATED IN: chloroplast; EXPRESSED IN: 15
           plant structures; EXPRESSED DURING: 7 growth stages;
           BEST Arabidopsis thaliana protein match is: nucleolar
           protein gar2-related (TAIR:AT2G42320.2); Has 3369 Blast
           hits to 1526 proteins in 313 species: Archae - 2;
           Bacteria - 910; Metazoa - 754; Fungi - 336; Plants -
           137; Viruses - 11; Other Eukaryotes - 1219 (source: NCBI
           BLink). | chr5:2145139-2147849 FORWARD LENGTH=723
          Length = 723

 Score =  181 bits (459), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 176/341 (51%), Gaps = 71/341 (20%)

Query: 388 KSVRSSADIARSISLGSNHHA-------------------EVKENGFNGDAQNSGGNIRS 428
           K+VRSS   A+++S  S++ +                   E KE+    DA NS  N  S
Sbjct: 177 KTVRSSKSQAKALSDFSSYRSSENNKAFSSASPVDSTPFEEGKEDDEFEDALNSVHNNES 236

Query: 429 SDKREAKIYPREARNNI---LDSKVEHLESKIKMLEGELREAAAIEASLYSVVAEHGSSM 485
            +  E  +Y  + R+++   L  K+E +E++I+ LE ELRE AA+E SLYSV  EHGSS 
Sbjct: 237 DN--ETLVYKEKKRSDVEKVLAQKIETMEARIEKLEEELREVAALEMSLYSVFPEHGSSS 294

Query: 486 GKVHAPARRLSRLYLHACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIV 545
            K+H PAR LSRLY  A K   + +     K+ +SGL L+ K+CG+DV RLT+WLSN+++
Sbjct: 295 HKLHKPARNLSRLYALARKNQSENKIISVTKNIVSGLSLLLKSCGSDVSRLTYWLSNTVM 354

Query: 546 LRTIISKTTKDVAPSNPAVSSTRRKSGEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNW 605
           LR IIS                               +  G S     N+  E     +W
Sbjct: 355 LREIIS-------------------------------LDFGSSKLNGLNSLKE-----DW 378

Query: 606 DDPNVFTSALEKVEAWLFSRIVESIWWQSLTPHM-----QKSYTKMSG------TCDQDL 654
            D     +AL +VE+  F++ VESIW Q +  HM       +  +M G      TCD+  
Sbjct: 379 GDVRTLIAALRRVESCFFTQAVESIWSQVMMVHMIPQGVDSTMGEMIGNFSEPATCDRLQ 438

Query: 655 GNLSLDIWKNAFREACERICPLRAGRHECGCLSVLPRLFNE 695
            + S+++WK AF EA +R+CP++A R +CGCL VL R+  E
Sbjct: 439 ESFSVNLWKEAFEEALQRLCPVQATRRQCGCLHVLTRMVME 479