Miyakogusa Predicted Gene

Lj2g3v2485570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2485570.1 Non Chatacterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.65,0.000000000000003,P-loop containing nucleoside triphosphate
hydrolases,NULL; SUBFAMILY NOT NAMED,NULL; DNA2/NAM7
HELIC,CUFF.38999.1
         (534 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65780.1 | Symbols:  | P-loop containing nucleoside triphosph...   341   6e-94
AT1G65810.2 | Symbols:  | P-loop containing nucleoside triphosph...   317   1e-86
AT1G65810.1 | Symbols:  | P-loop containing nucleoside triphosph...   317   2e-86
AT5G37150.1 | Symbols:  | P-loop containing nucleoside triphosph...   255   5e-68
AT5G37160.1 | Symbols:  | P-loop containing nucleoside triphosph...   234   1e-61
AT5G37140.1 | Symbols:  | P-loop containing nucleoside triphosph...   206   3e-53
AT5G37030.1 | Symbols:  | P-loop containing nucleoside triphosph...   202   3e-52
AT4G05540.1 | Symbols:  | P-loop containing nucleoside triphosph...   186   5e-47
AT5G52090.1 | Symbols:  | P-loop containing nucleoside triphosph...   185   6e-47
AT2G03270.1 | Symbols:  | DNA-binding protein, putative | chr2:9...    55   8e-08
AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putati...    52   1e-06

>AT1G65780.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:24462958-24466888
           REVERSE LENGTH=1065
          Length = 1065

 Score =  341 bits (875), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 183/517 (35%), Positives = 295/517 (57%), Gaps = 50/517 (9%)

Query: 14  DLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISV 73
           DL+D+V SW+L++ L  +L+K Q+ KIP  F S   Y  +FIP LIEETH+ L S +  +
Sbjct: 10  DLVDLVLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKL 69

Query: 74  SQAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSV 133
            QAP  EIS I  + ++  P  LFYK++L   +   +A  K +P   D+ + T  RP  V
Sbjct: 70  WQAPVVEISYIMQTAEYKLPNDLFYKVRLSGISN--EASTKLMPR--DLISLTDQRPNHV 125

Query: 134 DDLNMPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMNMTT 193
           D  N+    Y +A V +   +  ++++IL+S  + ++      + K ++L+ + L+N+TT
Sbjct: 126 DGFNISSEPYIVALVCKVDPDRPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTT 185

Query: 194 NVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICL--SGENLSPGYSQVQNIIR 251
           N+RIW ALH   E  N+NL+  V++ +++ +     C  CL    + L+P         R
Sbjct: 186 NIRIWNALHPGDEGVNLNLISRVLRRNSEDEGF---CIQCLQEGSDGLAPR--------R 234

Query: 252 AQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLAC 311
              LN SQ++A+L+C  +R+C+H ++ ++LIWGPPGTGKTKT + LLF+L  ++ RTL C
Sbjct: 235 FLKLNPSQEDAILNCLDVRRCYH-ANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTC 293

Query: 312 APTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFLDHRVKD 371
            PTN +VL VASR+  +V  SL++ +YGLGD+VLFGN  RMK+   K L  +F+D RV  
Sbjct: 294 GPTNVSVLEVASRVLKLVSGSLKIGNYGLGDVVLFGNDERMKIKDRKDLVNIFIDERVDK 353

Query: 372 LLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKKSGTNVEFA 431
           L PCF+P  GWK  ++ MIRLL+DP+G+Y LY             LE  A+ +    +  
Sbjct: 354 LYPCFMPFYGWKATIDGMIRLLEDPKGQYNLY-------------LENLARANNVKRKDT 400

Query: 432 YRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFVRQRFCSIGER 491
              +K++   ++   +EQ  +                   +   + + ++ ++F  + + 
Sbjct: 401 GSVFKRKGNEQNENIVEQVSD-------------------TRPQSFQDYLPEKFSELRKD 441

Query: 492 LKFSMRTLCMHLPTSILPFKAAKKMFRSQELLRSLEI 528
           L     +LC HLPT++L  +AA +M+ + +L+R + I
Sbjct: 442 LDLHFSSLCTHLPTALLSSQAATRMYEAIDLVRDVTI 478


>AT1G65810.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:24477043-24480728
           REVERSE LENGTH=1016
          Length = 1016

 Score =  317 bits (812), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 172/419 (41%), Positives = 251/419 (59%), Gaps = 18/419 (4%)

Query: 14  DLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISV 73
           DL+D+VFSW+L D L  NL++ Q+ KIP TF S K Y  SF+  +IEETH++L S + ++
Sbjct: 21  DLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTI 80

Query: 74  SQAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSV 133
            +A   +   I+P +DF PP  L+Y++ L+ T E +    + + EV D+ A T  RP  +
Sbjct: 81  RRAQAFKFWEIKPGKDFKPPRDLYYEVTLQMTNEYMTKGGQNLLEVNDLIAVTDKRPIRI 140

Query: 134 DDLNMPENYYHIAYVERKKDEYTDEISILSSN--------DMELDAKTDFSSNKAQKLYA 185
           DDL      Y +A V    +     I+IL+S         D++  +K      K+   + 
Sbjct: 141 DDLRFSHEPYLLALVCGVNENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKSLSFFG 200

Query: 186 VFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICL-SGENLSPGYS 244
           V L+NM TN+RIW ALH   E  N+ L+  V+Q++   +  G +C  C  + E++   YS
Sbjct: 201 VNLINMMTNIRIWTALHPNPEGGNLKLISRVLQSN--NEVDGGSCVSCKENSESVVSDYS 258

Query: 245 QVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKS 304
               ++R+  LN SQ++A+L C   + C+H S+ IKLIWGPPGTGKTKT + LL +  K 
Sbjct: 259 A--RMLRSFKLNSSQEDAILRCLEAKSCNH-SNNIKLIWGPPGTGKTKTTSVLLLNFLKM 315

Query: 305 RTRTLACAPTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVF 364
           R RTL CAPTN AVL V SRL  +V +SL  + YGLGDIVLFGN  RMK+D  + L +VF
Sbjct: 316 RCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYGLGDIVLFGNKERMKIDDREDLFDVF 375

Query: 365 LDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKK 423
           L++RV +L  CF+ LTGW+  +  MI LL DP+ E+  +K      +  L+S ++F ++
Sbjct: 376 LEYRVDELYRCFMALTGWRANVNRMICLLSDPKHEFRQFKSV----NTTLLSFKDFVEE 430


>AT1G65810.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:24477043-24480728
           REVERSE LENGTH=1050
          Length = 1050

 Score =  317 bits (811), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/419 (41%), Positives = 251/419 (59%), Gaps = 18/419 (4%)

Query: 14  DLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISV 73
           DL+D+VFSW+L D L  NL++ Q+ KIP TF S K Y  SF+  +IEETH++L S + ++
Sbjct: 21  DLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTI 80

Query: 74  SQAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSV 133
            +A   +   I+P +DF PP  L+Y++ L+ T E +    + + EV D+ A T  RP  +
Sbjct: 81  RRAQAFKFWEIKPGKDFKPPRDLYYEVTLQMTNEYMTKGGQNLLEVNDLIAVTDKRPIRI 140

Query: 134 DDLNMPENYYHIAYVERKKDEYTDEISILSSN--------DMELDAKTDFSSNKAQKLYA 185
           DDL      Y +A V    +     I+IL+S         D++  +K      K+   + 
Sbjct: 141 DDLRFSHEPYLLALVCGVNENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKSLSFFG 200

Query: 186 VFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICL-SGENLSPGYS 244
           V L+NM TN+RIW ALH   E  N+ L+  V+Q++   +  G +C  C  + E++   YS
Sbjct: 201 VNLINMMTNIRIWTALHPNPEGGNLKLISRVLQSN--NEVDGGSCVSCKENSESVVSDYS 258

Query: 245 QVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKS 304
               ++R+  LN SQ++A+L C   + C+H S+ IKLIWGPPGTGKTKT + LL +  K 
Sbjct: 259 A--RMLRSFKLNSSQEDAILRCLEAKSCNH-SNNIKLIWGPPGTGKTKTTSVLLLNFLKM 315

Query: 305 RTRTLACAPTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVF 364
           R RTL CAPTN AVL V SRL  +V +SL  + YGLGDIVLFGN  RMK+D  + L +VF
Sbjct: 316 RCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYGLGDIVLFGNKERMKIDDREDLFDVF 375

Query: 365 LDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKK 423
           L++RV +L  CF+ LTGW+  +  MI LL DP+ E+  +K      +  L+S ++F ++
Sbjct: 376 LEYRVDELYRCFMALTGWRANVNRMICLLSDPKHEFRQFKSV----NTTLLSFKDFVEE 430


>AT5G37150.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:14701330-14704562
           FORWARD LENGTH=839
          Length = 839

 Score =  255 bits (651), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 161/401 (40%), Positives = 230/401 (57%), Gaps = 44/401 (10%)

Query: 9   ENFVNDLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYS 68
           +N    L+D VFSW+++D L ++ +K +   +P  F S+  Y   F+P L+ E H+EL+S
Sbjct: 3   QNEKTSLVDRVFSWSIKDILNKDFYKQKT--VPDKFRSVDEYYQCFVPHLLIEAHTELFS 60

Query: 69  GLISVSQAPFCEISTIEP---SRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAF 125
            L SVS++PF +I ++E        +    LFY I LK+T E + A  KY P+ GD+ A 
Sbjct: 61  SLKSVSKSPFVQIRSMETKTKQSSGSSSNKLFYDITLKAT-ESLSA--KYQPKCGDLIAL 117

Query: 126 TTIRPRSVDDLNMPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKL-Y 184
           T  +PR ++DLN P     +AYV              S  D+++      S +  +   +
Sbjct: 118 TMDKPRRINDLN-P---LLLAYV------------FSSDGDLKISVHLSRSISPLENYSF 161

Query: 185 AVFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYS 244
            VFLM +TTN RIW ALH+E  AA   L   V+QA+        N    L    +    +
Sbjct: 162 GVFLMTLTTNTRIWNALHNE--AAISTLTKSVLQANTV------NNVFVLK---MMGDLT 210

Query: 245 QVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKS 304
              +IIR+  LN SQ++A+L C   R C H  + +KLIWGPPGTGKTKTVA+LLF+L K 
Sbjct: 211 LFLDIIRSTKLNSSQEDAILGCLETRNCTH-KNSVKLIWGPPGTGKTKTVATLLFALLKL 269

Query: 305 RTRTLACAPTNTAVLGVASRLHIIVKD--SLELNSYGLGDIVLFGNSSRMKVDSHKG--- 359
           R +T+ CAPTNTA++ VASRL  + K+  + E  +Y LG+I+L GN  RM +  HK    
Sbjct: 270 RCKTVVCAPTNTAIVQVASRLLSLFKENSTSENATYRLGNIILSGNRDRMGI--HKNDHV 327

Query: 360 LKEVFLDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEY 400
           L +VFLD R+  L   F P +GW   LES+I+ L++PEG+Y
Sbjct: 328 LLDVFLDERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKY 368


>AT5G37160.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:14705426-14708376
           FORWARD LENGTH=871
          Length = 871

 Score =  234 bits (597), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/419 (36%), Positives = 218/419 (52%), Gaps = 65/419 (15%)

Query: 21  SWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVSQAPFCE 80
           SW+L+D L E+L K +I  IP  F S+  Y   F+P L+EET +EL+S   S+S++P   
Sbjct: 24  SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83

Query: 81  ISTIEP---SRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTI-----RPRS 132
           I ++E           +  F+ IKL    +D   +  Y P+ GDI A + +     RPR 
Sbjct: 84  ILSVETKVIEYSGRSSIKWFHDIKLMDYADDKNEI--YEPKCGDIIALSPLSLTEERPR- 140

Query: 133 VDDLN-MPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMNM 191
           +DDL+ +   Y    Y + K       IS+  S  +    K  F +        VFL+N+
Sbjct: 141 IDDLDPLLLGYVFSVYGDSK-------ISVHFSRSISQSEKHTFCT-------GVFLINI 186

Query: 192 TTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYS--QVQNI 249
           TTN RIW ALH +  AA+  L+  V+Q DA   +       C S EN   G    +V +I
Sbjct: 187 TTNTRIWNALHKD--AADSTLIQSVLQEDASATEQ------CFSCENDVDGSDSDRVVDI 238

Query: 250 IRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTL 309
           IR+  LN SQ+ A+L     R C H  + +KLIWGPPGTGKTKTVA+LL +L + + +T+
Sbjct: 239 IRSAKLNSSQEAAILGFLKTRNCKHK-ESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTV 297

Query: 310 ACAPTNTAVLGVASRLHIIVKDS----------------------------LELNSYGLG 341
            CAPTNT ++ VASRL  + K++                            LE  +YG+G
Sbjct: 298 VCAPTNTTIVAVASRLLSLSKETIVCAPTNSAIAEVVSRFEFSTLFYGTSILERTTYGMG 357

Query: 342 DIVLFGNSSRMKVDSHKGLKEVFLDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEY 400
           +IVL GN  RM + S+K L  VF + RV  L   FL   GWK  LES+I  L++ E +Y
Sbjct: 358 NIVLSGNRERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKY 416


>AT5G37140.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:14690436-14692851
           FORWARD LENGTH=692
          Length = 692

 Score =  206 bits (524), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/223 (49%), Positives = 146/223 (65%), Gaps = 11/223 (4%)

Query: 184 YAVFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGY 243
           + VFLMN+TTN RIW ALH+E  AAN  L+  V+Q +     + E C +C SG   + G 
Sbjct: 12  FGVFLMNLTTNTRIWNALHNE--AANSTLIKSVLQENT---LTTEQC-VCESG---AHGS 62

Query: 244 SQVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFK 303
            +V NIIR+  LN SQ+ A+LSC  +R C+H    +KLIWGPPGTGKTKTVA+LLF L K
Sbjct: 63  DRVTNIIRSAKLNSSQEAAILSCLKIRNCNHK-HSVKLIWGPPGTGKTKTVATLLFCLLK 121

Query: 304 SRTRTLACAPTNTAVLGVASRLHIIVK-DSLELNSYGLGDIVLFGNSSRMKVDSHKGLKE 362
              +T+ CAPTNTA++ V SRL  + K  S E ++YGLG+IVL GN +RM +  +  L +
Sbjct: 122 LSCKTVVCAPTNTAIVEVTSRLLSLFKTSSSEHSTYGLGNIVLSGNQARMGIKENDVLLD 181

Query: 363 VFLDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKH 405
           VFLD R+  L   F P +GWK  LES+I  L++ E +Y  Y H
Sbjct: 182 VFLDERIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVH 224


>AT5G37030.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:14634614-14636939
           REVERSE LENGTH=638
          Length = 638

 Score =  202 bits (515), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/390 (37%), Positives = 209/390 (53%), Gaps = 63/390 (16%)

Query: 15  LIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVS 74
           L+D +FSW++ED L ++L+K +I  IP  F S+  Y+  F+P L+EET +EL +   S+S
Sbjct: 9   LLDRIFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLS 68

Query: 75  QAPFCEISTIEP-SRDFNPPMG--LFYKIKLKSTTEDVQAVR-KYVPEVGDIFAFTTIRP 130
           +A   EIS++E  +++ +  +   LFY + +     D  ++R KY P+ GD+ A T  RP
Sbjct: 69  KAHLFEISSLETMTKESSGSLSNKLFYDMSI----NDALSIREKYQPKCGDLIALTKERP 124

Query: 131 RSVDDLNMPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMN 190
           R VDDLN P     I+      D Y + IS++ S  +  D K                  
Sbjct: 125 RGVDDLN-PLLLGSISV-----DTYPN-ISVILSRLIFHDEK------------------ 159

Query: 191 MTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLS---GENLSPGYSQVQ 247
                   K+L     A N +L+  V+Q +    +     PI  S   G+N       V 
Sbjct: 160 --------KSLGF---APNFDLIQSVLQPNTAGME-----PIVSSRTWGQN-------VL 196

Query: 248 NIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTR 307
           +IIR+  LN SQ+ A+LSC   R  +H  + +KLIWGP    KTKTVA+LL  L K R +
Sbjct: 197 DIIRSSKLNSSQEAAILSCLETRDSNHK-NSVKLIWGPL---KTKTVATLLLVLLKLRCK 252

Query: 308 TLACAPTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFLDH 367
           T+ CAPTNTA++ V SRL  +     E  +YGLG+I L GN  RM++     L+ VFLDH
Sbjct: 253 TVVCAPTNTAIVEVTSRLLALSNKYSEHATYGLGNIFLAGNQKRMRIKDTDYLRNVFLDH 312

Query: 368 RVKDLLPCFLPLTGWKHYLESMIRLLKDPE 397
           R+  L   FL   GWK  LES+I LL++ E
Sbjct: 313 RISKLRKLFLSTCGWKQSLESIIDLLENTE 342


>AT4G05540.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:2818776-2821065
           REVERSE LENGTH=689
          Length = 689

 Score =  186 bits (471), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 205/411 (49%), Gaps = 68/411 (16%)

Query: 132 SVDDLNMPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMNM 191
           +VDDLN P     +AYV    DE     S+ SS  + +D +  F S         FL+ +
Sbjct: 10  NVDDLN-P---LILAYVFSVGDEL--HFSVHSSKSISIDEQYSFRS-------GFFLIYL 56

Query: 192 TTNVRIWKALHHELEAANMNLVWEVVQAD-AKRQQSGENCPICLSGENLSPGYSQVQNII 250
           TTN RIWKALH+     N++L+  V+QA+ A  +QS       +S  N     + V +II
Sbjct: 57  TTNTRIWKALHNG--DGNLSLIKSVLQANTADTEQS-------VSSRNWG---NHVLDII 104

Query: 251 RAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLA 310
           R+ NLN SQ+ A+L+C   R+    +  +KLIWGPPGTG TKTVA+LLF+L     +T+ 
Sbjct: 105 RSANLNSSQESAILACLETREIRDKT-SVKLIWGPPGTGNTKTVATLLFALLSLSCKTVV 163

Query: 311 CAPTNTAVLGVASRLHIIVKD--SLELNSYGLGDIVLFGNSSRMKVD--SHKGLKEVFLD 366
           C PTNTAV+ VASRL  + K+  S E ++YGLG+IVL GN  RM +D   +  L  VFLD
Sbjct: 164 CTPTNTAVVAVASRLLALFKESSSTEHSTYGLGNIVLVGNRVRMGIDERGNDDLLNVFLD 223

Query: 367 HRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEY----VLYKHSENDDDKDLM-SLEEFA 421
            R+  L   F P   W+  LE++I +L++ E  Y    +L +  EN + K+++ +  EF 
Sbjct: 224 DRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYLLLSERKENQETKNILTAFGEFV 283

Query: 422 KKSGTNVEFAYRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFV 481
            K      F         +    +T  +FV + +D ++E     + D             
Sbjct: 284 MKM-----FLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKD------------- 325

Query: 482 RQRFCSIGERLKFSMRTLCMHLPTSILPFKAAKKMFRSQELLRSLEISLRQ 532
                         M  L  HLP S L     K M  +++ LR     L++
Sbjct: 326 --------------MVDLYTHLPKSFLSSNDVKNMIVARQALRQARTFLQE 362


>AT5G52090.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:21167432-21169462
           REVERSE LENGTH=676
          Length = 676

 Score =  185 bits (470), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 180/348 (51%), Gaps = 63/348 (18%)

Query: 189 MNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYSQ-VQ 247
           M +TTN RIW ALH+E + +   L   V+QA+       E    C   EN   G S  V 
Sbjct: 1   MTLTTNTRIWNALHNEADIST--LTKSVLQANT------EGTEQCFCSEN--DGRSDLVL 50

Query: 248 NIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTR 307
           +IIR+  LN SQ++A+L C   R C H  + +KLIWGPP TGKTKTVA+LLF+L K R +
Sbjct: 51  DIIRSTKLNSSQEDAILGCLETRNCTH-KNSVKLIWGPPRTGKTKTVATLLFALLKLRCK 109

Query: 308 TLACAPTNTAVLGVASRLHIIVKD--SLELNSYGLGDIVLFGNSSRMKVDSHKG-LKEVF 364
           T+ CAPTNTA++ V SRL  + K+  + E  +Y LG+I+L GN  RM ++ +   L +VF
Sbjct: 110 TVVCAPTNTAIVQVTSRLLSLFKENSTAENATYRLGNIILSGNRDRMGINKNDHVLLDVF 169

Query: 365 LDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKKS 424
           LD R+  L   F P +GW   LES+I+ L++PEG+Y          ++ +  LEE     
Sbjct: 170 LDERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKY----------ERHVYELEE----- 214

Query: 425 GTNVEFAYRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFVRQR 484
              VE      ++     +  T  +FV KN++                            
Sbjct: 215 ---VERMNEEDEREEVVVNIPTFGEFVQKNFN---------------------------- 243

Query: 485 FCSIGERLKFSMRTLCMHLPTSILPFKAAKKMFRSQELLRSLEISLRQ 532
             S+ E +K  +  L  HLP   LP++  KKM  S++ L+ +   LR+
Sbjct: 244 --SLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQRIRYFLRE 289


>AT2G03270.1 | Symbols:  | DNA-binding protein, putative |
           chr2:994071-995990 FORWARD LENGTH=639
          Length = 639

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 253 QNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACA 312
           +NL++SQK+A+    +       S  + L+ GPPGTGKT TV  ++    K  ++ LACA
Sbjct: 188 KNLDQSQKDAITKALS-------SKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACA 240

Query: 313 PTNTAVLGVASRL 325
            +N AV  +  RL
Sbjct: 241 ASNIAVDNIVERL 253


>AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative
           | chr5:19072009-19078856 FORWARD LENGTH=1254
          Length = 1254

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 9/72 (12%)

Query: 255 LNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFK-SRTRTLACAP 313
           LN SQ  AV S            PI LI GPPGTGKT T A++++ + K  + + L CAP
Sbjct: 489 LNASQVNAVKSVL--------QKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 540

Query: 314 TNTAVLGVASRL 325
           +N AV  +A ++
Sbjct: 541 SNVAVDQLAEKI 552