Miyakogusa Predicted Gene

Lj2g3v2475540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2475540.1 tr|G7J7W0|G7J7W0_MEDTR Intracellular protease
OS=Medicago truncatula GN=MTR_3g064140 PE=4 SV=1,86.02,0,Class I
glutamine amidotransferase-like,NULL; PUTATIVE THIJ FAMILY
INTRACELLULAR PROTEASE/AMIDASE,NU,CUFF.38994.1
         (194 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02720.1 | Symbols:  | Class I glutamine amidotransferase-lik...   321   2e-88
AT2G38860.2 | Symbols: YLS5 | Class I glutamine amidotransferase...   158   2e-39
AT2G38860.1 | Symbols: YLS5 | Class I glutamine amidotransferase...   158   2e-39
AT3G54600.1 | Symbols:  | Class I glutamine amidotransferase-lik...   149   2e-36
AT2G38860.3 | Symbols: YLS5 | Class I glutamine amidotransferase...   142   1e-34
AT1G53280.1 | Symbols:  | Class I glutamine amidotransferase-lik...    51   6e-07

>AT3G02720.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr3:586336-588088 FORWARD
           LENGTH=388
          Length = 388

 Score =  321 bits (823), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 151/186 (81%), Positives = 163/186 (87%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYD 66
           +F   DYMEDYEV VPFQSLQALGC VDAVCP+KKAGD CPTAIHDFEGDQTYSEKPG+ 
Sbjct: 201 LFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHT 260

Query: 67  FTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILA 126
           F L  ++D L  SSYDALVIPGGR+P YLALN+ V+ +VK FM S+KPVASICHGQQILA
Sbjct: 261 FALTTNFDDLVSSSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILA 320

Query: 127 AAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMV 186
           AAGVLKGRKCTAYPAVKLNVVL   TWLEPDPI+RCFTDGNLVTGAAWPGHPEF+ QLM 
Sbjct: 321 AAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMA 380

Query: 187 LLGIQV 192
           LLGIQV
Sbjct: 381 LLGIQV 386



 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 129/181 (71%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           DYMEDYEV VPFQ+LQA G  V  VCP KKAGD+CPTA+HDF G QTY E  G++FTLNA
Sbjct: 13  DYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNA 72

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
            +D +  S YD LVIPGGR+P YLAL  SV+ LVK F  S KP+ASICHGQ ILAAA  +
Sbjct: 73  TFDEVDLSKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAADTV 132

Query: 132 KGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMVLLGIQ 191
            GRKCTAY  V  ++V + A W+EP   + C  DG+L+T A + GHPEFI   +  LG +
Sbjct: 133 NGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGK 192

Query: 192 V 192
           +
Sbjct: 193 I 193


>AT2G38860.2 | Symbols: YLS5 | Class I glutamine
           amidotransferase-like superfamily protein |
           chr2:16233629-16235207 REVERSE LENGTH=398
          Length = 398

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 4/187 (2%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFE-GDQTYSEKPGY 65
           +F + DY+EDY + VPF++LQALGC VDAV P KK G+ C TA++D E G Q  +EK G+
Sbjct: 213 LFLIGDYVEDYGINVPFRALQALGCKVDAVTPNKKKGEVCATAVYDLEDGRQIPAEKRGH 272

Query: 66  DFTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQIL 125
           +F + A +D +    YD +V+PGGRSP  L +N+  +ALVK F E  K  A+I  G+ +L
Sbjct: 273 NFFVTASWDDICVDDYDCVVVPGGRSPELLVMNEKAVALVKSFAEKDKVFAAIGQGKLLL 332

Query: 126 AAAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLM 185
           AA GVLKG++C +   +K   V+ +    E    + C TDG +VT A+    P F+  L 
Sbjct: 333 AATGVLKGKRCASGKGMK---VMVKVAGGEAVMEKGCVTDGKVVTAASATDLPAFLFDLS 389

Query: 186 VLLGIQV 192
             LG+ V
Sbjct: 390 TALGLTV 396



 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 7/190 (3%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           DYME YE  VP   LQ+ G  V  V P + AGD C  + HDF G + Y+E      TLNA
Sbjct: 15  DYMEAYETIVPLYVLQSFGVSVHCVSPNRNAGDRCVMSAHDFLGLELYTELVVDQLTLNA 74

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
           ++D + P +YD ++IPGGR    L+ ++  + LV  F ESKK + + CH Q +L AAG+L
Sbjct: 75  NFDDVTPENYDVIIIPGGRFTELLSADEKCVDLVARFAESKKLIFTSCHSQVMLMAAGIL 134

Query: 132 KGR-KCTAYPAVKLNVVLSRATWLEPDPIER------CFTDGNLVTGAAWPGHPEFIPQL 184
            G  KCTA+ ++K  + LS   W +   I+       C  DGN ++   WP     I  L
Sbjct: 135 AGGVKCTAFESIKPLIELSGGEWWQQPGIQSMFEITDCVKDGNFMSTVGWPTLGHGIKLL 194

Query: 185 MVLLGIQVCS 194
           +  LG +VCS
Sbjct: 195 LESLGGKVCS 204


>AT2G38860.1 | Symbols: YLS5 | Class I glutamine
           amidotransferase-like superfamily protein |
           chr2:16233629-16235207 REVERSE LENGTH=389
          Length = 389

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 4/187 (2%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFE-GDQTYSEKPGY 65
           +F + DY+EDY + VPF++LQALGC VDAV P KK G+ C TA++D E G Q  +EK G+
Sbjct: 204 LFLIGDYVEDYGINVPFRALQALGCKVDAVTPNKKKGEVCATAVYDLEDGRQIPAEKRGH 263

Query: 66  DFTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQIL 125
           +F + A +D +    YD +V+PGGRSP  L +N+  +ALVK F E  K  A+I  G+ +L
Sbjct: 264 NFFVTASWDDICVDDYDCVVVPGGRSPELLVMNEKAVALVKSFAEKDKVFAAIGQGKLLL 323

Query: 126 AAAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLM 185
           AA GVLKG++C +   +K   V+ +    E    + C TDG +VT A+    P F+  L 
Sbjct: 324 AATGVLKGKRCASGKGMK---VMVKVAGGEAVMEKGCVTDGKVVTAASATDLPAFLFDLS 380

Query: 186 VLLGIQV 192
             LG+ V
Sbjct: 381 TALGLTV 387



 Score =  135 bits (339), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 16/190 (8%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           DYME YE  VP   LQ+ G  V  V P + AGD C  + HDF          G + TLNA
Sbjct: 15  DYMEAYETIVPLYVLQSFGVSVHCVSPNRNAGDRCVMSAHDF---------LGLELTLNA 65

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
           ++D + P +YD ++IPGGR    L+ ++  + LV  F ESKK + + CH Q +L AAG+L
Sbjct: 66  NFDDVTPENYDVIIIPGGRFTELLSADEKCVDLVARFAESKKLIFTSCHSQVMLMAAGIL 125

Query: 132 KGR-KCTAYPAVKLNVVLSRATWLEPDPIER------CFTDGNLVTGAAWPGHPEFIPQL 184
            G  KCTA+ ++K  + LS   W +   I+       C  DGN ++   WP     I  L
Sbjct: 126 AGGVKCTAFESIKPLIELSGGEWWQQPGIQSMFEITDCVKDGNFMSTVGWPTLGHGIKLL 185

Query: 185 MVLLGIQVCS 194
           +  LG +VCS
Sbjct: 186 LESLGGKVCS 195


>AT3G54600.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr3:20211048-20212876 FORWARD
           LENGTH=399
          Length = 399

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 110/187 (58%), Gaps = 4/187 (2%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFE-GDQTYSEKPGY 65
           +F + D +EDY + VPF++ QALGC VDAV P KK G+ C T +HD E G Q  +EK G+
Sbjct: 214 LFLIGDCVEDYSINVPFKAFQALGCKVDAVTPTKKRGEKCATIVHDLEDGRQLPTEKFGH 273

Query: 66  DFTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQIL 125
           +F +   +D +    YD +V+PGGRSP  L +N   + LV+ F+E  K VA+I  G  +L
Sbjct: 274 NFYVTVAWDDVSVDDYDCIVVPGGRSPELLVMNPKAVELVRKFVEKGKFVAAIGMGNWLL 333

Query: 126 AAAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLM 185
           AA G LK ++C +    K+ V ++    +E    ERC TD  LVT A+    P F+  L 
Sbjct: 334 AATGALKKKRCASSYGTKVAVKVAGGEIVES---ERCVTDDKLVTAASTSDLPAFLYALS 390

Query: 186 VLLGIQV 192
             LG+ V
Sbjct: 391 TALGLSV 397



 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 7/190 (3%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           ++ME YE  VP   LQA G  V  V P +K GD C  A HD  G + Y+E      TLNA
Sbjct: 15  EFMEAYETIVPLYVLQAFGVSVHCVSPGRKTGDKCVMAAHDLLGLEIYTELVVDHLTLNA 74

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
           ++DG+ P  YDA++IPGGR    L+ ++  ++LV  F E KK + + CH Q  LAAAG+L
Sbjct: 75  NFDGVIPDQYDAIIIPGGRFTELLSADEKCVSLVARFAELKKLIFTSCHSQLFLAAAGLL 134

Query: 132 K-GRKCTAYPAVKLNVVLSRATWLEPDPIER------CFTDGNLVTGAAWPGHPEFIPQL 184
             G KCTA+ ++K  + LS   W +   ++       C  DG+ ++   WP     +  L
Sbjct: 135 TGGMKCTAFESMKPFIELSGGAWWQQPGVQTLFEITDCVKDGSFMSTMGWPTLGHSLKVL 194

Query: 185 MVLLGIQVCS 194
           +  LG ++ S
Sbjct: 195 LESLGSKISS 204


>AT2G38860.3 | Symbols: YLS5 | Class I glutamine
           amidotransferase-like superfamily protein |
           chr2:16233629-16235207 REVERSE LENGTH=279
          Length = 279

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 7/190 (3%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           DYME YE  VP   LQ+ G  V  V P + AGD C  + HDF G + Y+E      TLNA
Sbjct: 15  DYMEAYETIVPLYVLQSFGVSVHCVSPNRNAGDRCVMSAHDFLGLELYTELVVDQLTLNA 74

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
           ++D + P +YD ++IPGGR    L+ ++  + LV  F ESKK + + CH Q +L AAG+L
Sbjct: 75  NFDDVTPENYDVIIIPGGRFTELLSADEKCVDLVARFAESKKLIFTSCHSQVMLMAAGIL 134

Query: 132 KGR-KCTAYPAVKLNVVLSRATWLEPDPIER------CFTDGNLVTGAAWPGHPEFIPQL 184
            G  KCTA+ ++K  + LS   W +   I+       C  DGN ++   WP     I  L
Sbjct: 135 AGGVKCTAFESIKPLIELSGGEWWQQPGIQSMFEITDCVKDGNFMSTVGWPTLGHGIKLL 194

Query: 185 MVLLGIQVCS 194
           +  LG +VCS
Sbjct: 195 LESLGGKVCS 204



 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 26/33 (78%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPK 39
           +F + DY+EDY + VPF++LQALGC VDAV  K
Sbjct: 213 LFLIGDYVEDYGINVPFRALQALGCKVDAVMEK 245


>AT1G53280.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr1:19864942-19867341 REVERSE
           LENGTH=438
          Length = 438

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 74  DGLKPSSYDALVIPGGRSPAY-LALNQSVIALVKHFMESKKPVASICHG-QQILAAAGVL 131
           D  + +SYD +V+PGG   A   A ++ ++ ++K   ES KP  +IC     +    G+L
Sbjct: 313 DEAEKNSYDLIVLPGGLGGAEAFASSEKLVNMLKKQAESNKPYGAICASPALVFEPHGLL 372

Query: 132 KGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEF 180
           KG+K TA+PA  +   L+  + +E     R   DGNL+T        EF
Sbjct: 373 KGKKATAFPA--MCSKLTDQSHIE----HRVLVDGNLITSRGPGTSLEF 415