Miyakogusa Predicted Gene

Lj2g3v2474520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2474520.1 Non Chatacterized Hit- tr|I3SWC8|I3SWC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,NULL; LRAT,LRAT-like domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.38992.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02700.1 | Symbols:  | NC domain-containing protein-related |...   338   1e-93
AT5G06370.1 | Symbols:  | NC domain-containing protein-related |...   295   3e-80
AT5G16360.1 | Symbols:  | NC domain-containing protein-related |...   280   7e-76
AT5G16330.1 | Symbols:  | NC domain-containing protein-related |...   251   2e-67
AT1G01225.1 | Symbols:  | NC domain-containing protein-related |...   235   2e-62
AT4G00905.1 | Symbols:  | NC domain-containing protein-related |...   234   4e-62

>AT3G02700.1 | Symbols:  | NC domain-containing protein-related |
           chr3:581727-582813 REVERSE LENGTH=252
          Length = 252

 Score =  338 bits (868), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 169/237 (71%), Positives = 201/237 (84%), Gaps = 3/237 (1%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDRL 60
           MG LSNKI R+ + PGDHIYSWRQAYIYAHHGIYVG+G V HFTRG GQE GTGT LD +
Sbjct: 1   MGFLSNKISRDDVKPGDHIYSWRQAYIYAHHGIYVGNGQVNHFTRGDGQETGTGTFLDNI 60

Query: 61  LVSSSPSYDADNPCPKCGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAKTRGGT 120
           +VSSS ++  DNPCP CGD+S   GVISSCL+CFLAGG+LY+FEY VSPA+FLAK RGG 
Sbjct: 61  IVSSSHNH-GDNPCPDCGDRSNLGGVISSCLECFLAGGDLYVFEYSVSPAIFLAKPRGGV 119

Query: 121 CTLKAADPSEDVLHRASFLLENGFGGYNIFRNNCEDFAIYCKTGLLVFTSISVGRSGQAA 180
           CT+ ++DP E+V++RA+FLL+NGFG YN+F+NNCEDFAIYCKTGLLV  +  VGRSGQAA
Sbjct: 120 CTIASSDPPEEVIYRANFLLQNGFGVYNVFKNNCEDFAIYCKTGLLV-ANTDVGRSGQAA 178

Query: 181 SYLAAASTVVSTPLRFMTNSFGGLALVGYGLYCVGRLMSDIGMRRDVSKVPVERLIA 237
           S +AAAS ++S+PLRF+   FGGLA+ GYG+YC  RL+SDIGMR DVSKVPVERL+A
Sbjct: 179 SIVAAASVLLSSPLRFVA-GFGGLAVAGYGMYCTSRLVSDIGMRWDVSKVPVERLVA 234


>AT5G06370.1 | Symbols:  | NC domain-containing protein-related |
           chr5:1947299-1948432 REVERSE LENGTH=259
          Length = 259

 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 145/236 (61%), Positives = 175/236 (74%), Gaps = 3/236 (1%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDRL 60
           MG+LSN+IDR  L PGDHIYSWR AYIYAHHGIYVGD  VIHFTR  GQE+GTGTVLD +
Sbjct: 1   MGLLSNRIDRSSLKPGDHIYSWRTAYIYAHHGIYVGDDRVIHFTR-RGQEVGTGTVLDLI 59

Query: 61  LVSSSPSYDADNPCPKCGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAKTRGGT 120
           LVSS PS +  + CP C   ++  GV+SSCL+CFLAGG LY FEY V+ A FL K RGGT
Sbjct: 60  LVSSGPSRNHTH-CPTCVPPNEGHGVVSSCLNCFLAGGVLYRFEYSVNAAHFLVKARGGT 118

Query: 121 CTLKAADPSEDVLHRASFLLENGFGGYNIFRNNCEDFAIYCKTGLLVFTSISVGRSGQAA 180
           CTL  ADP+E V+HRA  LL+NGFG Y++F+NNCEDFAIYCKT LLV    ++G+SGQA 
Sbjct: 119 CTLAVADPNEIVVHRAKHLLQNGFGCYDVFKNNCEDFAIYCKTALLVLEGRTMGQSGQAV 178

Query: 181 SYLAAA-STVVSTPLRFMTNSFGGLALVGYGLYCVGRLMSDIGMRRDVSKVPVERL 235
           S +    + V+STP+R +T +  G+A    G+YC  R  +DIGMR DV+KV  E L
Sbjct: 179 SIIGGPIAAVLSTPMRLLTTNVYGMAATAIGVYCASRYATDIGMRADVAKVEAEDL 234


>AT5G16360.1 | Symbols:  | NC domain-containing protein-related |
           chr5:5355236-5356195 REVERSE LENGTH=283
          Length = 283

 Score =  280 bits (716), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 146/275 (53%), Positives = 181/275 (65%), Gaps = 33/275 (12%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDRL 60
           MG+ S+KI R+ L PGDHIYSWR AYIY+HHG+YVGD  VIHFTRG G E GTGTVLD++
Sbjct: 1   MGLFSHKISRDDLKPGDHIYSWRNAYIYSHHGVYVGDEKVIHFTRGGGLEFGTGTVLDKI 60

Query: 61  LVSSSPSY-DADNPCPKCGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAKTRGG 119
           +  S P++   D  C  CGDQS   GVISSCLDCFLAGGNL+LFEY  SP++FLAK RGG
Sbjct: 61  IDISIPNHGRRDKKCIDCGDQSNLGGVISSCLDCFLAGGNLHLFEYSASPSIFLAK-RGG 119

Query: 120 TCTLKAADPSEDVLHRASFLL-ENGFGGYNIFRNNCEDFAIYCKTGLLVFT-SISVGRSG 177
           TCT+ ++DP ++V+ RA FLL +NGFG Y++  NNCEDFAIYCKTGL V + +   G SG
Sbjct: 120 TCTIASSDPCDEVISRAKFLLLQNGFGEYDLLDNNCEDFAIYCKTGLFVLSVATKFGCSG 179

Query: 178 QAASYLAAASTV-----------------------------VSTPLRFMTNSFGGLALVG 208
           QA S  AA   V                             +S+ ++++    GGLAL  
Sbjct: 180 QANSVSAAGGVVALTLKVLGVKKKSSSGHEDDSVVSVVNQFISSTVKYVVPGIGGLALAE 239

Query: 209 YGLYCVGRLMSDIGMRRDVSKVPVERLIASPGLDE 243
           YG YC+GRL  DIG+R+D  KV VE L+A  G  +
Sbjct: 240 YGNYCIGRLFYDIGVRKDACKVSVEELVAFVGAKQ 274


>AT5G16330.1 | Symbols:  | NC domain-containing protein-related |
           chr5:5346163-5346977 REVERSE LENGTH=242
          Length = 242

 Score =  251 bits (642), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 134/237 (56%), Positives = 165/237 (69%), Gaps = 17/237 (7%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDRL 60
           +G +SN+I R++L PGDHIYSWR AYIY+HHGIY+GD  VIHFT G G E GTGT LD++
Sbjct: 9   IGFISNQISRDKLKPGDHIYSWRNAYIYSHHGIYIGDEKVIHFTCGGGLETGTGTFLDKI 68

Query: 61  LVSSSPSYDADNPCPKCGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAKTRGGT 120
           +VS  P++  DNPC  C +Q   +GVISSCLDCFLAGGN+YLFEY VSPA F+AK R GT
Sbjct: 69  VVSVIPNHKGDNPCSNCEEQLNLEGVISSCLDCFLAGGNIYLFEYSVSPAAFIAKPRRGT 128

Query: 121 CTLKAADPSEDVLHRASF-LLENGFGGYNIFRNNCEDFAIYCKTGLLVFTSISVGRSGQA 179
           CT+  +DP ++V+ RA + LL NGFG Y+   NNCEDFAIYCKT LLV     +GR GQA
Sbjct: 129 CTIAPSDPCDEVISRAKYLLLRNGFGDYHALENNCEDFAIYCKTSLLVGKDYVLGRGGQA 188

Query: 180 ASYLAAASTVVSTPLRFMTNSFGGLALVGYGLYCVGRLMSDIGMRRDVSKVPVERLI 236
           +S  AAA     +P       FG  A+         +L +DIGMR+D  KVPVE L+
Sbjct: 189 SSVSAAAWLAQLSP-------FGSKAI---------QLFADIGMRKDAIKVPVESLV 229


>AT1G01225.1 | Symbols:  | NC domain-containing protein-related |
           chr1:96064-97242 FORWARD LENGTH=260
          Length = 260

 Score =  235 bits (600), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 6/236 (2%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDRL 60
           MG+L+NKI+RE+L PGDHIY++R  + Y+HHGI+VG   V+HF R     + + T     
Sbjct: 1   MGLLTNKIEREELKPGDHIYTYRAIFAYSHHGIFVGGSKVVHF-RPEHNPMDSSTSSISS 59

Query: 61  LVSSSPSYDADNPCPKCGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAKTRGGT 120
             S        +  P CG +    GV+ SCLDCFL  G+LY FEYGVSP++FL K RGGT
Sbjct: 60  SSSED----ICSIFPDCGFRQPDSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGGT 115

Query: 121 CTLKAADPSEDVLHRASFLLENGFGGYNIFRNNCEDFAIYCKTGLLVFTSISVGRSGQAA 180
           CT   +D ++ V+HRA +LL+NGFG Y+IF+NNCEDFA+YCKTGLL+   + VGRSGQA+
Sbjct: 116 CTTAQSDTTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQAS 175

Query: 181 SYLAAA-STVVSTPLRFMTNSFGGLALVGYGLYCVGRLMSDIGMRRDVSKVPVERL 235
           S + A  + ++S+P + +  S  G+A V  G+YC+ R  +DIG+R DV KV VE L
Sbjct: 176 SIVGAPLAALLSSPFKLLIPSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDL 231


>AT4G00905.1 | Symbols:  | NC domain-containing protein-related |
           chr4:387865-389060 FORWARD LENGTH=263
          Length = 263

 Score =  234 bits (597), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 121/257 (47%), Positives = 167/257 (64%), Gaps = 7/257 (2%)

Query: 1   MGVLSNKIDREQLNPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGT--GTVLD 58
           MGVL+NK++R++L PGDHIY++R  + Y+HHG++VG   V+HF         T   +   
Sbjct: 1   MGVLTNKVERDELKPGDHIYTYRAVFAYSHHGVFVGGCKVVHFKPEHSLISPTLASSSSS 60

Query: 59  RLLVSSSPSYDADNPCPK---CGDQSKSDGVISSCLDCFLAGGNLYLFEYGVSPALFLAK 115
                S  +  ++ PCP    CG +    GV+ SCLDCFL  G+LY F+YGVS ++FL +
Sbjct: 61  SSSSVSEVNDSSEAPCPTYPDCGYKRPKSGVVLSCLDCFLKKGSLYRFDYGVSSSIFLTR 120

Query: 116 TRGGTCTLKAADPSEDVLHRASFLLENGFGGYNIFRNNCEDFAIYCKTGLLVFTSISVGR 175
            RGGTCT   +DP + V+HRA  LL+NGFG YN+F+NNCEDFA+YCKTGLL+     VGR
Sbjct: 121 FRGGTCTTAPSDPLQTVIHRAMHLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGR 180

Query: 176 SGQAASYLAAA-STVVSTPLRFMTNSFGGLALVGYGLYCVGRLMSDIGMRRDVSKVPVER 234
           SGQA+S + A  + ++S+PL  +  +  G+A V  G+YC+ R  +DIG+R DV KVPVE 
Sbjct: 181 SGQASSIIGAPLAALLSSPLTLLIPNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVED 240

Query: 235 LIASPGLDEPEKTAEMA 251
           L  + GL +P K    A
Sbjct: 241 LALNLGL-KPLKRKRKA 256