Miyakogusa Predicted Gene

Lj2g3v2459310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2459310.1 Non Chatacterized Hit- tr|D7LZX4|D7LZX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.19,4e-17,seg,NULL,CUFF.38989.1
         (731 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37010.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   140   4e-33
AT1G65710.1 | Symbols:  | unknown protein; INVOLVED IN: N-termin...    92   9e-19

>AT5G37010.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins
           in 486 species: Archae - 7; Bacteria - 485; Metazoa -
           3508; Fungi - 577; Plants - 378; Viruses - 50; Other
           Eukaryotes - 1741 (source: NCBI BLink). |
           chr5:14620853-14622879 REVERSE LENGTH=637
          Length = 637

 Score =  140 bits (352), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 163/371 (43%), Gaps = 107/371 (28%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGEIKRVAVKRNXXXXXXXXXXXXXXXXXXXXXXXN 344
           PGK VSVPAT  +L     +N +G G +KR+ VKRN                        
Sbjct: 241 PGKFVSVPATDKAL-----SNNNGDGSVKRITVKRNVGKAASP----------------- 278

Query: 345 GRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPLSEVDPNS 404
            RSQSPARA                      PS S+   +RK EHSPYRRNPLSE+DPNS
Sbjct: 279 -RSQSPARA-------------------ASQPSPSK--LSRKTEHSPYRRNPLSEIDPNS 316

Query: 405 LAYPQSN-------TNGKVQNKPK------KEIEPEANQKSNIDMNDNTRNRTSNRVALE 451
           +A+P S         N ++ N+        KE      QK N  MN     +T  +  + 
Sbjct: 317 VAFPLSQGDKLGSGNNIRMMNRDNENQGLVKESGTFVAQKLNPVMN----TKTVTQAPIR 372

Query: 452 KGVGGNCKAKEHHQE-EEIKVLPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDI 510
           +    +   KE  +  EE K          ++V SG +  KPQ +           D D 
Sbjct: 373 RTASPSRAIKEQQEAVEECK----------IVVSSGTELAKPQ-IVSRSRSLRKSRDFDF 421

Query: 511 NPEALLNPPL-----------------TYTSLLLEDIHNFHQKNTQQQPSVSLPACLTKA 553
           +PEALL+  +                 +YT+LLLEDI NFHQK+       +L + ++KA
Sbjct: 422 SPEALLSNNIDINNVNSNNATAGSTFPSYTALLLEDIQNFHQKSVNVS---ALSSSMSKA 478

Query: 554 CSILEAVADLXXXXXXXXXXXXHQGKRVADTKDPFXXXXXXXXXXXMEPSLHKYVTVKRG 613
           CSI+EAVADL            HQ   V+ T               MEPS  KYVTVKRG
Sbjct: 479 CSIVEAVADL------NSATNQHQRTEVSFT------SAAAKKADLMEPSFEKYVTVKRG 526

Query: 614 GSI--DMDDQE 622
           GS   DM++QE
Sbjct: 527 GSSLDDMEEQE 537


>AT1G65710.1 | Symbols:  | unknown protein; INVOLVED IN: N-terminal
           protein myristoylation; EXPRESSED IN: cultured cell;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT5G37010.1); Has 2241 Blast hits to 1776
           proteins in 164 species: Archae - 0; Bacteria - 29;
           Metazoa - 1759; Fungi - 94; Plants - 93; Viruses - 17;
           Other Eukaryotes - 249 (source: NCBI BLink). |
           chr1:24437057-24438424 REVERSE LENGTH=455
          Length = 455

 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 128/331 (38%), Gaps = 114/331 (34%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGEIKRVAVKRNXXXXXXXXXXXXXXXXXXXXXXXN 344
           PGK V++PAT      +KSNN      +KR+ VKRN                        
Sbjct: 225 PGKFVTIPAT------DKSNNVEP--LVKRITVKRNIGDACRIAASP------------- 263

Query: 345 GRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPLSEVDPNS 404
            RS+SPARA          G N         PSLSR+NS RKAE SPYRRNPL       
Sbjct: 264 -RSKSPARA----------GNNV--------PSLSRSNS-RKAEQSPYRRNPL------- 296

Query: 405 LAYPQSNTNGKVQNKPKKEIEPEANQKSNIDMNDNT-RNRTSNRVALEKGVGGNCKAKEH 463
                    G++    KK IE       ++  N  T R  + +RVA              
Sbjct: 297 ---------GEIDQNTKKMIE-------SVKPNSRTSRGPSPSRVA-------------- 326

Query: 464 HQEEEIKVLPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDINPEALLNPPLTYT 523
                        VV+            PQ +           D D+    + N    YT
Sbjct: 327 -------------VVELT--------KAPQVVLSRSRSLRKSRDFDL----VSNEDNNYT 361

Query: 524 SLLLEDIHNFHQKNTQQQPSVSLPACLTKACSILEAVADLXXXXXXXXXXXXHQGKRVAD 583
           +LLL+DI +FH K+      +SLP C++KACSI+EAVADL                R   
Sbjct: 362 ALLLKDIQSFHGKSVDDS-VISLPLCVSKACSIVEAVADLNSMTNRTCLRSDSSRFRFTS 420

Query: 584 TKDPFXXXXXXXXXXXMEPSLHKYVTVKRGG 614
           T               MEPS  KYVTVKRGG
Sbjct: 421 T---------VKKADLMEPSFEKYVTVKRGG 442