Miyakogusa Predicted Gene
- Lj2g3v2437090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2437090.1 Non Chatacterized Hit- tr|A5AZN9|A5AZN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.3,1e-18,seg,NULL,CUFF.38967.1
(274 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31930.3 | Symbols: XLG3 | extra-large GTP-binding protein 3 ... 52 5e-07
AT1G31930.2 | Symbols: XLG3 | extra-large GTP-binding protein 3 ... 52 5e-07
AT1G31930.1 | Symbols: XLG3 | extra-large GTP-binding protein 3 ... 52 5e-07
AT2G23460.1 | Symbols: XLG1, ATXLG1 | extra-large G-protein 1 | ... 49 3e-06
AT4G34390.1 | Symbols: XLG2 | extra-large GTP-binding protein 2 ... 48 8e-06
>AT1G31930.3 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
chr1:11465832-11468961 FORWARD LENGTH=848
Length = 848
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 135 CTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVG 194
C C + + C+VC YC CV MG M EGRKC+ C+G + + GK
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIGQAIDESKRSKLGKHS 235
Query: 195 CCSWRYPGTIKQAELMCAEK 214
R ++ ++M AEK
Sbjct: 236 RVLSRLLSPLEVKQIMKAEK 255
>AT1G31930.2 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
chr1:11465832-11468961 FORWARD LENGTH=848
Length = 848
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 135 CTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVG 194
C C + + C+VC YC CV MG M EGRKC+ C+G + + GK
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIGQAIDESKRSKLGKHS 235
Query: 195 CCSWRYPGTIKQAELMCAEK 214
R ++ ++M AEK
Sbjct: 236 RVLSRLLSPLEVKQIMKAEK 255
>AT1G31930.1 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
chr1:11465832-11468961 FORWARD LENGTH=848
Length = 848
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 135 CTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVG 194
C C + + C+VC YC CV MG M EGRKC+ C+G + + GK
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIGQAIDESKRSKLGKHS 235
Query: 195 CCSWRYPGTIKQAELMCAEK 214
R ++ ++M AEK
Sbjct: 236 RVLSRLLSPLEVKQIMKAEK 255
>AT2G23460.1 | Symbols: XLG1, ATXLG1 | extra-large G-protein 1 |
chr2:9995699-9998945 FORWARD LENGTH=888
Length = 888
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 149 CLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVGCCS 197
CLVC YC CV MG M EGRKC+ C+G + + G +G CS
Sbjct: 240 CLVCDAKYCNSCVLRAMGSMPEGRKCVTCIGFPIDE---SKRGSLGKCS 285
>AT4G34390.1 | Symbols: XLG2 | extra-large GTP-binding protein 2 |
chr4:16441579-16444840 FORWARD LENGTH=861
Length = 861
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 149 CLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVGCCS 197
C+VC YC+ CV+ MG M EGRKC C+G R + + +G CS
Sbjct: 229 CIVCDAKYCFNCVRRAMGAMPEGRKCQACIGYRIDE---SKRASLGKCS 274