Miyakogusa Predicted Gene

Lj2g3v2414570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2414570.1 Non Chatacterized Hit- tr|C5YVU5|C5YVU5_SORBI
Putative uncharacterized protein Sb09g013380 OS=Sorghu,48.57,5e-19,
,CUFF.38933.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30395.1 | Symbols: ATOFP17, OFP17 | ovate family protein 17 ...   142   2e-34
AT1G06923.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   108   4e-24

>AT2G30395.1 | Symbols: ATOFP17, OFP17 | ovate family protein 17 |
           chr2:12954409-12955083 REVERSE LENGTH=195
          Length = 195

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 111/195 (56%), Gaps = 29/195 (14%)

Query: 1   MKVKALGV-FKSKIFKPCKKILHFFRFKPKKPVLIRALKSRS---------HKSKFQKPM 50
           M+VKA  + FKSK+ K C + +  FRF+ K+PV IR L++R          H SK  KP+
Sbjct: 1   MRVKATLINFKSKLSKSCNRFVSLFRFRVKRPVFIRPLRARHGNVKPRHQHHHSK--KPI 58

Query: 51  SSLLSVFRSPKKSK--------------DLGMLQGLKSP-SNMLETPLFPSPLT-PAFVK 94
            S L    S K  K              D    + ++SP +      LF SP+T P   +
Sbjct: 59  CSCLCFLNSSKNHKMSNAKHRSSSFSVNDDDYSKFMQSPLTPATAKKLFTSPITTPYSSR 118

Query: 95  ASGGTEKREG-SSQEVEDACRSFENYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCPVFID 153
                  R+      VEDACRSFENYL+ +IVEEGK  DLMD+EE L+CWKNLK PVFI+
Sbjct: 119 TRKSLNARDTFEDNAVEDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFIE 178

Query: 154 LVCRFYGELCKDLFS 168
           LV RFYGELC+DLFS
Sbjct: 179 LVSRFYGELCRDLFS 193


>AT1G06923.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: ovate family protein 17 (TAIR:AT2G30395.1); Has
           35333 Blast hits to 34131 proteins in 2444 species:
           Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
           991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
           (source: NCBI BLink). | chr1:2126802-2127398 FORWARD
           LENGTH=170
          Length = 170

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 21/182 (11%)

Query: 1   MKVKA-LGVFKSKIFKPCKKILHFFRFKPKKPVLIRALKSRSHKSKFQKPMSSLLSVFRS 59
           M++K+ L   KSK+ K C + + FF  + +            + ++           F +
Sbjct: 1   MRLKSSLISLKSKLSKSCNRFISFFHARFRNV----------NTTQSSSSSLLSRLCFLN 50

Query: 60  PKKSKDLGMLQGLKSPSNMLETP-------LFPSPLTPAFVKASGGTEKREGSSQE-VED 111
             K + +  ++   SPS++++         +FP  +T    KA   T +R    ++ V++
Sbjct: 51  TNKEQRMSQIRPRNSPSSLIDDSKLLHSRKMFPLAMTQRNKKAR--TSQRHMLKEDGVKE 108

Query: 112 ACRSFENYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCPVFIDLVCRFYGELCKDLFSTDS 171
           ACR FENY++ M VE+GK  DLMD+EE LY WKNL  P+FIDLV RFYGELC DLF +D 
Sbjct: 109 ACRRFENYMIHMFVEDGKIDDLMDMEELLYYWKNLNSPIFIDLVTRFYGELCTDLFPSDH 168

Query: 172 EE 173
           ++
Sbjct: 169 DD 170