Miyakogusa Predicted Gene

Lj2g3v2410330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2410330.1 Non Chatacterized Hit- tr|I1MBI6|I1MBI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6998
PE=,86.07,0,seg,NULL,CUFF.38923.1
         (989 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06950.1 | Symbols: ATTIC110, TIC110 | translocon at the inne...  1299   0.0  

>AT1G06950.1 | Symbols: ATTIC110, TIC110 | translocon at the inner
            envelope membrane of chloroplasts 110 |
            chr1:2130303-2135563 REVERSE LENGTH=1016
          Length = 1016

 Score = 1299 bits (3361), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/976 (66%), Positives = 771/976 (78%), Gaps = 13/976 (1%)

Query: 27   RRRFRVSLPRCSSSDAXXXXXXXXXX-------XXDLNGIEVFVDKLSPPXXXXXXXXXX 79
            RRR+RVS PR S++ +                   +L G++  V+K++PP          
Sbjct: 41   RRRYRVSFPRSSAASSDQLSVSTQAKNPGIHGNKKELTGLQPIVEKMTPPVRLATSAVVL 100

Query: 80   XXXXXXXXXLGSRFGGSRNXXXXXXXXXXXXXXXXXXXXXXXXPQVAAVNLHNYVAGVDD 139
                     LG R  GSRN                        P+VAA++LHNYVA  +D
Sbjct: 101  AASLATGYGLGLRLAGSRNIAFGGAAVAGAAGGAVVYALNSAVPEVAAISLHNYVAEFED 160

Query: 140  PSKLKKEDIDAIASKYGVNKQDEAFKAEICDIYAEFVSSVFPPAGEDLRGDEVDRIVSFK 199
            P+ + K+D++ IA +YGVNK DEAF+AEICDIY  +V+SV P  G+ L+GDEV +IV FK
Sbjct: 161  PASVTKDDVEKIADRYGVNKGDEAFQAEICDIYCRYVTSVLPTEGQSLKGDEVAKIVKFK 220

Query: 200  NSLGIDDPDAANMHMEIGRKIFRQRLEV--REDDIEQRRAFQKLIYVSNLVFGDASSFLL 257
            N+LGID+PDAA MHMEIGR+IFRQRLE   RE D EQRRAF +L+YVS LVFGDASSFLL
Sbjct: 221  NALGIDEPDAAAMHMEIGRRIFRQRLETGEREGDAEQRRAFMRLVYVSALVFGDASSFLL 280

Query: 258  PWKRVFKVTDSQIEVAVRDNAQRLYASKLKSVGRDIDAEQLVTLREAQRLCRLSDELAEN 317
            PWKRV KVTD+Q+E+A+R+NA++LYA +LK VGRDI+ E LV LR++Q   +LSDELAE+
Sbjct: 281  PWKRVLKVTDAQVEIAIRENAKQLYAERLKLVGRDINVENLVDLRKSQLSFKLSDELAED 340

Query: 318  LFRGHTRKLVEVNISVALGELKSRTRSVTGVKQAVEELDRVLAFNNLLISFKNHPDVDRF 377
            LFR HTRK+V  NIS AL  LKSRTR+   +   VEEL++VL FNNLL+S K+H + D+F
Sbjct: 341  LFREHTRKVVVENISSALSILKSRTRAAKSLASVVEELEKVLEFNNLLVSLKSHSEADQF 400

Query: 378  ARGVGPVSLVGGEYDGDRKMEDLKLLYRAYVSDALSGGRIEDSKLAGLNQLRNIFGLGKR 437
            ARGVGP+SL+G E D +R+M+DLKLLYRAYV+DALSGGR+E++KL  ++QLRNI GLGKR
Sbjct: 401  ARGVGPISLIGDESDFERRMDDLKLLYRAYVTDALSGGRLEENKLVAMSQLRNILGLGKR 460

Query: 438  EAEAISLDVTSKVYRKRLSQAVSGGELEMADSKAAFLQNLCDELHFDPTKASELHEEIYR 497
            EAEAIS+DVTSK YRKRL+ AVS G+LE  DSKA +LQ LC+ELHFD  KA  +HEEIYR
Sbjct: 461  EAEAISVDVTSKSYRKRLANAVSSGDLEAQDSKAKYLQKLCEELHFDAQKAGAIHEEIYR 520

Query: 498  QKLQQYVADGELSDENVAALLRLRVMLCVPQQIVEAAHADICGSLFEKTVKEAIASGVDG 557
            QKLQQ V DGELSD+NVAALLRLRVMLC+PQQ V+ AHA+ICG++FEK V++AI+SGVDG
Sbjct: 521  QKLQQCVTDGELSDDNVAALLRLRVMLCIPQQTVDTAHAEICGTIFEKVVRDAISSGVDG 580

Query: 558  YDADVKLAVRKAAHGLRLSRETAMSIAGKAVRKIFVTYIKRSRAAGNRTESARELKKMIA 617
            YDA+ + +VRKAAHGLRLSRETAMSIA KAVR++F  YI+R+RAA NRT+SA+ELKKMIA
Sbjct: 581  YDAETRKSVRKAAHGLRLSRETAMSIASKAVRRVFTNYIRRARAAENRTDSAKELKKMIA 640

Query: 618  FNTLVVTELVEDIKGESAEVSTEE-PVIXXXXXXXXXXWDSLQTLEKIRPNKELVAKMGK 676
            FNTLVVTE+V DIKGES++ + EE PV           W SL++L K RP+KEL  KMGK
Sbjct: 641  FNTLVVTEMVADIKGESSDKAPEEDPVQEKEEDDEDEEWGSLESLRKTRPDKELAEKMGK 700

Query: 677  PGQTEITLKDDLPERDRADLYKTYLLYCLTGEVTRVPFGAQITTKKDDSEYVLLNQLGGI 736
            PGQTEITLKDDLP+RDR DLYKTYLLYC+TGEVTR+PFGAQITTK+DDSEY+LLNQLGGI
Sbjct: 701  PGQTEITLKDDLPDRDRIDLYKTYLLYCVTGEVTRIPFGAQITTKRDDSEYLLLNQLGGI 760

Query: 737  LGLSGKEIMEVHRGLAEQAFRQQAEVILADGQLTKARVEQLNNLQKQVGLPQEYAQKIIK 796
            LGLS KEI+ +H GLAEQAFRQQAEVILADGQLTKARVEQL+ LQKQVGLPQ  A+K+IK
Sbjct: 761  LGLSSKEIVNIHVGLAEQAFRQQAEVILADGQLTKARVEQLDELQKQVGLPQPQAEKVIK 820

Query: 797  SITTTKMAAAIETAVSQGRLNIKQIRELKEANVDLDSMVSENLREILFKKTVDDIFSSGT 856
            +ITTTKMA AIETAV+QGRLNIKQIRELKEANV LDSM++ +LRE LFKKTV DIFSSGT
Sbjct: 821  NITTTKMANAIETAVNQGRLNIKQIRELKEANVSLDSMIAVSLREKLFKKTVSDIFSSGT 880

Query: 857  GEFDEEEVYEKIPLDLNINKEKARGVVRELALTRLSNSLIQAVALLRQRNRAGVVSSLND 916
            GEFDE EVY+ IP DL+I+ EKA+ VV +LA +RLSNSL+QAVALLRQRN  GVV SLND
Sbjct: 881  GEFDETEVYQTIPSDLSIDVEKAKRVVHDLAQSRLSNSLVQAVALLRQRNSKGVVLSLND 940

Query: 917  LLACDKAVPSEKLSWEVPEELSDLYSVYFKSD--PTPEKLSRLQYLLGINDSTAASLRES 974
            LLACDKAVP+E +SWEV EELSDLY++Y KSD  P PEK+ RLQYLLGI+DSTA +LRE 
Sbjct: 941  LLACDKAVPAEPMSWEVSEELSDLYAIYSKSDPKPAPEKVLRLQYLLGIDDSTATALREM 1000

Query: 975  GDRLLETAEEE-EFVF 989
             D  L +A EE  FVF
Sbjct: 1001 EDGALSSAAEEGNFVF 1016