Miyakogusa Predicted Gene

Lj2g3v2351520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2351520.1 Non Chatacterized Hit- tr|I1N138|I1N138_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42810
PE,67.11,0,MA3,Initiation factor eIF-4 gamma, MA3; Domain in DAP-5,
eIF4G, MA-3 and other prote,Initiation fact,CUFF.38869.1
         (290 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80930.1 | Symbols:  | MIF4G domain-containing protein / MA3 ...   357   4e-99
AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3 ...    69   4e-12
AT1G52325.1 | Symbols:  | Initiation factor eIF-4 gamma, MA3 | c...    64   1e-10

>AT1G80930.1 | Symbols:  | MIF4G domain-containing protein / MA3
           domain-containing protein | chr1:30405774-30409499
           REVERSE LENGTH=900
          Length = 900

 Score =  357 bits (917), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 189/301 (62%), Positives = 212/301 (70%), Gaps = 59/301 (19%)

Query: 6   QFLIEGLFAIRKAKFQGYPAVQSELDVVD--IDPEISLDVFKADPNYLENEKRYQELKNS 63
           Q+LIE LFA RKAKFQG+PAV+ ELD+V+     ++SLD                     
Sbjct: 533 QYLIESLFATRKAKFQGHPAVRPELDLVEEKYSHDLSLD--------------------- 571

Query: 64  ILXXXXXXXXXXXXXXXXXXXXXVIDPETSLDIFKADPNHLENEKRYQELKKTVLGEEEG 123
                                   IDPET+LDIFK DP+ +ENEK+Y+ LKK +LG+EE 
Sbjct: 572 ----------------------HEIDPETALDIFKPDPDFVENEKKYEALKKELLGDEES 609

Query: 124 SNADEDD--------------ESGEESMQIKDETETNLVDLRRTIYLTIMSSVNLDGAGH 169
            + D  D              E  EE M+I+DETETNLV+LRRTIYLTIMSSV+ + AGH
Sbjct: 610 EDEDGSDASSEDNDEEEDESDEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGH 669

Query: 170 KLLKIHLESGQEMELCIMLLECCSQERIYLHNYGLLGQRLCMISKVHQENFEKCFVQQYS 229
           KLLKI LE GQEMELCIMLLECCSQER YL  YGLLGQR CMI+K+HQENFEKCFVQQYS
Sbjct: 670 KLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYS 729

Query: 230 MTHRLETNKLRNVAKFFAHLLGTDTLPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHL 289
           M HRLETNKLRNVAKFFAHLLGTD LPWHVL+YIRLTEEDTTSSSRIFIKILFQELSEHL
Sbjct: 730 MIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHL 789

Query: 290 G 290
           G
Sbjct: 790 G 790


>AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3
           domain-containing protein | chr5:5940131-5943952 REVERSE
           LENGTH=784
          Length = 784

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 1/142 (0%)

Query: 148 VDLRRTIYLTIMSSVNLDGAGHKLLKIHLESGQEMELCIMLLECCSQERIYLHNYGLLGQ 207
            D R+ I+  IMSS +   A  KLL++ L   Q+ E+  +L+ECC QE+ +   Y +L  
Sbjct: 584 TDSRKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIMRVLVECCLQEKAFNKFYTVLAS 643

Query: 208 RLCMISKVHQENFEKCFVQQYSMTHRLETNKLRNVAKFFAHLLGTDTLPWHVLSYIRLTE 267
           +LC   K H+   + C    +     +   +  ++AKF A ++ T  L   VL  + L  
Sbjct: 644 KLCEHDKNHKFTLQYCIWDHFKELESMSLQRSMHLAKFVAEIIVTFNLSLAVLKSVDLAN 703

Query: 268 EDTTSSSRIF-IKILFQELSEH 288
               +  RI   ++LF+ + EH
Sbjct: 704 PVELTPKRIMHFRMLFEAIFEH 725


>AT1G52325.1 | Symbols:  | Initiation factor eIF-4 gamma, MA3 |
           chr1:19487793-19488418 REVERSE LENGTH=145
          Length = 145

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 159 MSSVNLDGAGHKLLKIHLESGQEMELCIMLLECCSQERIYLHNY 202
           MSS++ + AGHKLLKI LE GQ MELC+M+LECC++E+ Y   Y
Sbjct: 1   MSSLDFEEAGHKLLKIRLEQGQGMELCVMVLECCTEEKTYRSFY 44