Miyakogusa Predicted Gene
- Lj2g3v2278540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2278540.1 Non Chatacterized Hit- tr|C5YWL6|C5YWL6_SORBI
Putative uncharacterized protein Sb09g030130
OS=Sorghu,22.95,3e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR_2,Pentatricopeptide repeat; PPR,Penta,CUFF.38787.1
(606 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 696 0.0
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 306 2e-83
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 238 1e-62
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 231 1e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 222 6e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 8e-56
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 213 2e-55
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 201 1e-51
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 197 2e-50
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 192 6e-49
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 8e-49
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 190 2e-48
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 7e-48
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 1e-47
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 187 1e-47
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 9e-47
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 1e-46
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 8e-46
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 180 3e-45
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 179 4e-45
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 8e-45
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 3e-44
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 5e-44
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 9e-44
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 173 3e-43
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 172 6e-43
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 8e-43
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 8e-42
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 1e-41
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 164 1e-40
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 2e-40
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 164 2e-40
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 162 4e-40
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 4e-40
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 9e-40
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 161 1e-39
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 160 2e-39
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 160 2e-39
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 160 2e-39
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 159 5e-39
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 7e-39
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 9e-39
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 157 2e-38
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 5e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 155 7e-38
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 155 1e-37
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 154 2e-37
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 3e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 153 3e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 152 9e-37
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 151 1e-36
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 2e-36
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 2e-36
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 150 2e-36
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 149 5e-36
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 8e-36
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 1e-35
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 148 1e-35
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 3e-35
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 3e-35
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 146 4e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 6e-35
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 145 8e-35
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 9e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 1e-34
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 3e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 4e-34
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 4e-34
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 5e-34
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 5e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 7e-34
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 1e-33
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 7e-33
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 137 2e-32
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 3e-32
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 136 4e-32
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 5e-32
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 136 5e-32
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 134 2e-31
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 3e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 122 6e-28
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 122 7e-28
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 119 6e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 8e-26
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 9e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 115 1e-25
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 111 1e-24
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 110 3e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 108 8e-24
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 99 1e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 98 2e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 92 1e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 90 5e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 6e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 5e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 80 6e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 1e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 2e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 65 1e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 58 2e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 3e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 52 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/594 (54%), Positives = 430/594 (72%), Gaps = 7/594 (1%)
Query: 16 LSIPSYSASQFEFIASTRV------HANSNYVSMSIRSLPYPKFM-DAQLNQLCSNGPLS 68
L +PS+ + + +V H S ++S P + D Q + LC NG L
Sbjct: 4 LFVPSFPKTFLNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLL 63
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVS 128
+A LDSL +QGSKV+ TY+ LL+SCID I +GR LHAR GL + FVETKL+S
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLS 123
Query: 129 MYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFL 188
MY+KCG +++ARKVFD MRERNLFTWSAMIGA SRE W EV LF M++ G LPD+FL
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
PKILQ C CGD+E G++IHSV I+ GM S +RV+NSI+AVYAKCGE+ FA K F+ M
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
ERD + WN+++ +CQNG E+A + M++EG+ PGLVTWNILI YNQLG+CD A+D
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD 303
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
LM+KME+FG+T DV+TW++MISG G Y ALD+ RKM L+GV PN++T+
Sbjct: 304 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
E+H I VKM +DDVL GNSL+DMYSKCG LE A+++FD + +DVY+WN+
Sbjct: 364 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I GYC AG+CGKAYELF +MQD++ PN++TWN +I+GY+++G E +A+DLF+R+EKDG
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
K++RN A+WN +IAG++Q+G+KD+A+++FR+MQF + PNSVT+LS+LPA ANL+ K V
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+EIH C LRRNL + +V N L D+YAKSG++ YSR IF G+ KDII+WN ++
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 211/407 (51%), Gaps = 5/407 (1%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ Y++ G A + +M ++FTW+AMI + +D+F M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
+P+ + + AC + G +HS+A++ G + V NS++ +Y+KCG++ A+
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
K+F S+ +D TWN++ITG+CQ G +A + F MQ+ + P ++TWN +I+ Y + G
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 302 RCDIAVDLMRKMESFG-LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
A+DL ++ME G + + TW+ +I+G+ Q G+ AL+L RKM S PNS+T+
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
EIHG ++ +L N+L D Y+K GD+E ++ IF M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
+D+ +WN++IGGY G G A LF +M+ PN T +++I + G D+ +
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
F I D I + ++++ + ++ + ++A+Q + M P
Sbjct: 648 FYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 200/415 (48%), Gaps = 76/415 (18%)
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSS--IRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
K+L++C G + GR++H+ R G+ + + V ++++YAKCG
Sbjct: 86 KLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCG------------- 129
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
C I ARK FD+M+E
Sbjct: 130 --------------C----IADARKVFDSMRER--------------------------- 144
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+++TWS+MI ++++ R L R M+ GV P+
Sbjct: 145 ------------NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
IH + +K+ + + NS++ +Y+KCG+L+ A + F M ERDV +WN+
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
++ YC G +A EL +M+ P +VTWN LI GY Q G D A+DL +++E G
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I +V +W ++I+G + +G + +A+ +FR+M + PN+VT++S + A + L +
Sbjct: 313 -ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
E+H A++ + ++ V N L+D Y+K G L +R++FD + KD+ +WN M++
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMIT 426
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 137/299 (45%), Gaps = 13/299 (4%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET 124
G L DA + DS+ + T+ +++ EL R+ N+ P + T
Sbjct: 401 GKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIIT 455
Query: 125 --KLVSMYSKCGHLSEARKVFDEMR-----ERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
++S Y K G EA +F M +RN TW+ +I + +E ++LF M
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
F+P+ + +L AC + R IH +R + + V N++ YAK G++
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
+++ +F M+ +D +TWN++I G+ +G A F+ M+ +G+ P T + +I ++
Sbjct: 576 EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 298 NQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
+G D + + + + + P + S+M+ + + R AL +++M + P
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 110/214 (51%), Gaps = 9/214 (4%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF 121
NG +A+ + + Q S+ P +T ++LL +C + ++ RE+H + L N++
Sbjct: 502 NGKKDEALELFRKM--QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV-LRRNLDAI 558
Query: 122 --VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
V+ L Y+K G + +R +F M +++ TW+++IG S+ + LF M
Sbjct: 559 HAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G P+ L I+ A G G+++ G+ + +S+A + + ++ ++++ +Y + +
Sbjct: 619 QGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLE 678
Query: 239 FAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQA 271
A + + M+ + ++ W + +TG +GDI+ A
Sbjct: 679 EALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 324/623 (52%), Gaps = 50/623 (8%)
Query: 29 IASTRVHANSNYVSMSIRSLPYPKFMDAQ------------LNQLCSNGPLSDAVAILDS 76
+AS + N V S+ S P K D Q ++ LC NG + +A++++
Sbjct: 1 MASLPFNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTE 60
Query: 77 LAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV---NPFVETKLVSMYSKC 133
+ + ++ P Y +LQ C+ + G+++HARI G+ N ++ETKLV Y+KC
Sbjct: 61 MDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC 120
Query: 134 GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
L A +F ++R RN+F+W+A+IG R E + F +M+ + PD F++P +
Sbjct: 121 DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC 180
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV 253
+ACG GR +H ++ G+ + V +S+ +Y KCG + A K+F + +R++V
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI-LIASYN----QLGRCDIAVD 308
WNA++ G+ QNG E+A + F M+++GVEP VT + L AS N + G+ A+
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 309 LMRKME--------------SFGLT------------PDVYTWSSMISGFTQKGRTYHAL 342
++ ME GL DV TW+ +ISG+ Q+G A+
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI 360
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMY 402
+ + M L ++ + +T+ E+ ++ S D++ ++++DMY
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 403 SKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
+KCG + A+++FD E+D+ WNT++ Y +G G+A LF MQ PPNV+TWN
Sbjct: 421 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN 480
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+I +++G D+A D+F +++ G I N+ SW +++ G +Q+G ++A+ R+MQ
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIP-NLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL--VSEISVSNILIDSYAKSGNL 580
+ PN+ ++ L A A+L + + IH + RNL S +S+ L+D YAK G++
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYII-RNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 581 MYSRRIFDGLPLKDIISWNIMLS 603
+ ++F ++ N M+S
Sbjct: 599 NKAEKVFGSKLYSELPLSNAMIS 621
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 236/462 (51%), Gaps = 4/462 (0%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG--NVNPF 121
NG +A+ + + +QG + +T L + + +E G++ HA I +V ++
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA-IAIVNGMELDNI 310
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
+ T L++ Y K G + A VFD M E+++ TW+ +I ++ E+ + + M
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
D L ++ A + +L+ G+ + IRH S I + +++M +YAKCG + AK
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
K+F S E+D + WN ++ + ++G +A + F MQ EGV P ++TWN++I S + G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
+ D A D+ +M+S G+ P++ +W++M++G Q G + A+ LRKM SG+ PN+ ++
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVK-MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
IHG ++ + V SL+DMY+KCGD+ A+++F
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
++ N +I Y G +A L+ ++ P+ +T +++ +G +QA+++
Sbjct: 611 SELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
F I +K + + ++ +G+ +KA+++ M F
Sbjct: 671 FTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF 712
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/574 (23%), Positives = 238/574 (41%), Gaps = 109/574 (18%)
Query: 91 NLLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
N+ ++C GR +H + GL V FV + L MY KCG L +A KVFDE+
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCV--FVASSLADMYGKCGVLDDASKVFDEIP 235
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
+RN W+A++ + EE + LF DM + G P + L A G +E G+
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
H++AI +GM + S++ Y K G + +A+ +F M E+D VTWN II+G+ Q G
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGL 355
Query: 268 IEQARKYFDAMQEEGVEPGLVTW------------------------------NILIAS- 296
+E A M+ E ++ VT +I++AS
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAST 415
Query: 297 -YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
+ +C VD + +S + D+ W+++++ + + G + AL L M L GV P
Sbjct: 416 VMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
N V+T N +I + G ++ A+ +F
Sbjct: 475 N-----------------------------------VITWNLIILSLLRNGQVDEAKDMF 499
Query: 416 DMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA-------- 463
M ++ SW T++ G G +A KMQ+S PN +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 464 -------LITGYMQSGAEDQAL--------DLFKRIEKDGKIKRNVAS--------WNSL 500
I GY+ + +L D++ + K ++ S N++
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM 619
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC-CALRRN 559
I+ + G +A+ ++R ++ + P+++T+ ++L A + + EI +R+
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
+ + +++D A +G + R+ + +P K
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 259/484 (53%), Gaps = 40/484 (8%)
Query: 123 ETKLVS----MYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
+T++VS Y +C L A K+FDEM +R+ W+ ++ R +WE+ V+LF +M
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G + + K+LQ C GR IH +R G+ S++ + NS++ +Y++
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSR----- 136
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
NG +E +RK F++M++ L +WN +++SY
Sbjct: 137 --------------------------NGKLELSRKVFNSMKDRN----LSSWNSILSSYT 166
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+LG D A+ L+ +ME GL PD+ TW+S++SG+ KG + A+ +L++M ++G++P++
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
++ IHG ++ L DV +LIDMY K G L A+ +FDMM
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 419 YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQAL 478
+++ +WN+++ G +A A L ++M+ P+ +TWN+L +GY G ++AL
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
D+ ++++ G + NV SW ++ +G ++G A+++F +MQ + PN+ T+ ++L
Sbjct: 347 DVIGKMKEKG-VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 539 FANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISW 598
L KE+H LR+NL+ + V+ L+D Y KSG+L + IF G+ K + SW
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465
Query: 599 NIML 602
N ML
Sbjct: 466 NCML 469
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 143/583 (24%), Positives = 272/583 (46%), Gaps = 63/583 (10%)
Query: 51 PKFMDAQLNQLC----SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGR 106
PK D N++ +G AV + + G+K T + LLQ C +++ GR
Sbjct: 50 PKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGR 109
Query: 107 ELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
++H R+GL NV+ + L+ MYS+ G L +RKVF+ M++RNL +W++++ + ++
Sbjct: 110 QIHGYVLRLGLESNVS--MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK 167
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFL----------------------------------- 188
++ + L +M G PD
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
+ +LQA + G L+ G+ IH +R+ + + V +++ +Y K G + +A+ +F MD
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
++ V WN++++G ++ A M++EG++P +TWN L + Y LG+ + A+D
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
++ KM+ G+ P+V +W+++ SG ++ G +AL + KM GV PN+ T+
Sbjct: 348 VIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG 407
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
E+HG ++ +L+ D +L+DMY K GDL++A IF + + + SWN
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 467
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
++ GY G + F M ++ P+ +T+ ++++ SG + F +
Sbjct: 468 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRY 527
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I + + ++ +SG D+A + M + P++ +I AF
Sbjct: 528 GIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDA----TIWGAF--------- 571
Query: 549 KEIHCCALRRNL-VSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
+ C + R+L ++EI+ + + S N M ++ L
Sbjct: 572 --LSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNL 612
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 37/312 (11%)
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
++ AS GRC +++ K+ D W+ ++ + G A++L R+M S
Sbjct: 25 VVSASMGFYGRC-VSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFS 83
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
G + T+ +IHG +++ L +V NSLI MYS+ G LE +
Sbjct: 84 GAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELS 143
Query: 412 QRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
+++F+ M +R N+ +WN++++ Y +
Sbjct: 144 RKVFNSMKDR-----------------------------------NLSSWNSILSSYTKL 168
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G D A+ L +E G +K ++ +WNSL++G+ G A+ + +RMQ + P++ +
Sbjct: 169 GYVDDAIGLLDEMEICG-LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
+ S+L A A K K IH LR L ++ V LID Y K+G L Y+R +FD +
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 592 LKDIISWNIMLS 603
K+I++WN ++S
Sbjct: 288 AKNIVAWNSLVS 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 23/315 (7%)
Query: 62 CS-NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGN 117
CS NG +A+ + + E+G T LL+ + G+E+H R L+
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI-- 428
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
+ +V T LV MY K G L A ++F ++ ++L +W+ M+ + EE + F M
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
+ G PD +L C G ++ G + + R+G+ +I + ++ + + G
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGY 548
Query: 237 MGFAKKLFKSMDER-DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP-GLVTWNILI 294
+ A ++M + D+ W A ++ + D+E A + +Q +EP + ++I
Sbjct: 549 LDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV--LEPHNSANYMMMI 606
Query: 295 ASYNQLGRCDIAVDLMRKMESFGL-TPDVYTW---SSMISGFTQKGRT--------YHAL 342
Y+ L R + + M + + D+++W + F +G+T +
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELY 666
Query: 343 DLLRKMLLSGVEPNS 357
L+ +M SG P++
Sbjct: 667 KLVSEMKKSGYVPDT 681
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 288/585 (49%), Gaps = 78/585 (13%)
Query: 92 LLQSCIDRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRER 149
LLQ+ R IE+GR++H + + + + T++++MY+ CG ++R VFD +R +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRH-GFLPDEFLLPKILQACGKCGDLETGRLI 208
NLF W+A+I + SR + ++EV++ F +M+ LPD F P +++AC D+ G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H + ++ G+ + V N++++ Y G + A +LF M ER+ V+WN++I F NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 269 EQARKYFDAMQEE--------------------------GVEPGLVTW------------ 290
E++ M EE G+ G+ W
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 291 -NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
N L+ Y++ G C ++ KM + +V +W++M+ GF+ +G T+ D+LR+ML
Sbjct: 330 NNALMDMYSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 350 LSG--VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
G V+ + +T+ E+H +K V + L N+ + Y+KCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
L AQR+F + + V SWN +IGG+ + + + ++M+ S P+ T +L++
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 468 -----YMQSGAEDQALDLFKRIEKD--------------GKI-----------KRNVASW 497
++ G E + +E+D G++ +++ SW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
N++I G+LQ+G D+A+ +FR+M + I ++++ + A + L + + +E H AL+
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
L + ++ LID YAK+G++ S ++F+GL K SWN M+
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 235/534 (44%), Gaps = 96/534 (17%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVF 143
TY ++++C + +G +H + GLV +V FV LVS Y G +++A ++F
Sbjct: 188 FTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV--FVGNALVSFYGTHGFVTDALQLF 245
Query: 144 DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH----GFLPDEFLLPKILQACGKC 199
D M ERNL +W++MI S EE L +M+ F+PD L +L C +
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
++ G+ +H A++ + + +NN++M +Y+KCG + A+ +FK + ++ V+WN ++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 260 TGFCQNGDIEQARKYFDAMQE------------------------EGVEPGL-------- 287
GF GD FD +++ E P L
Sbjct: 366 GGFSAEGDTHGT---FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 288 --------VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
+ N +ASY + G A + + S V +W+++I G Q
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS----KTVNSWNALIGGHAQSNDPR 478
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
+LD +M +SG+ P+S TV E+HG ++ L D+ S++
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM---------- 449
+Y CG+L Q +FD M ++ + SWNT+I GY GF +A +F +M
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 450 ------------------QDSDS-------PPNVVTWNALITGYMQSGAEDQALDLFKRI 484
+++ + + +LI Y ++G+ Q+ +F
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF--- 655
Query: 485 EKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+G +++ ASWN++I G+ G +A+++F MQ P+ +T L +L A
Sbjct: 656 --NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 209/463 (45%), Gaps = 34/463 (7%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
T + +L C I +G+ +H + L + + L+ MYSKCG ++ A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG--FLPDEFLLPKILQACGKCGDLET 204
+N+ +W+ M+G S E D+ M+ G DE + + C L +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
+ +H +++ + V N+ +A YAKCG + +A+++F + + +WNA+I G Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY- 323
+ D + M+ G+ P T L+++ ++L + ++ + L D++
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 324 ------------------------------TWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
+W+++I+G+ Q G AL + R+M+L G+
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+ I++ E H +K L DD SLIDMY+K G + + +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
+F+ + E+ SWN +I GY G +A +LF +MQ + P+ +T+ ++T SG
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ L +++ +K N+ + +I ++GQ DKA+++
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 212/503 (42%), Gaps = 94/503 (18%)
Query: 185 DEFLLPK-----ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS------IMAVYAK 233
D FLL + +LQA GK D+E GR IH + + S R+ N I+ +YA
Sbjct: 78 DAFLLVREALGLLLQASGKRKDIEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAM 132
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF-DAMQEEGVEPGLVTWNI 292
CG ++ +F ++ ++ WNA+I+ + +N ++ + F + + + P T+
Sbjct: 133 CGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVY----------------------------- 323
+I + + I + + + GL DV+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 324 --TWSSMISGFTQKGRTYHALDLLRKMLLSGVE----PNSITVXXXXXXXXXXXXXXXXX 377
+W+SMI F+ G + + LL +M+ + P+ T+
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
+HG VK+ L +++ N+L+DMYSKCG + AQ IF M ++V SWNT++GG+ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 438 FCGKAYELFMKM----------------------QDSDSPP---------------NVVT 460
+++ +M +S P N +
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
NA + Y + G+ A +F I + V SWN+LI G QS ++ +M
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRS-----KTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+ + P+S TV S+L A + L + + KE+H +R L ++ V ++ Y G L
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 581 MYSRRIFDGLPLKDIISWNIMLS 603
+ +FD + K ++SWN +++
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVIT 570
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 37/384 (9%)
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVNPFVETKLVSMYSKCGHLSEARK 141
K +T +N + C + +ELH + N V V+ Y+KCG LS A++
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 142 VFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
VF +R + + +W+A+IG ++ +D M G LPD F + +L AC K
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
L G+ +H IR+ + + V S++++Y CGE+ + LF +M+++ V+WN +ITG
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN-----QLGR-------------- 302
+ QNG ++A F M G++ ++ + + + +LGR
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 303 ----CDIAVDLMRKMESFGLTPDVY---------TWSSMISGFTQKGRTYHALDLLRKML 349
C + +D+ K S + V+ +W++MI G+ G A+ L +M
Sbjct: 632 AFIACSL-IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ 690
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+G P+ +T + + L ++ +IDM + G L
Sbjct: 691 RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 750
Query: 409 EAAQRIF--DMMYERDVYSWNTII 430
+ A R+ +M E DV W +++
Sbjct: 751 DKALRVVAEEMSEEADVGIWKSLL 774
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVNPFV 122
NG A+ + + G ++ I+ M + +C + +GRE HA + + + F+
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
L+ MY+K G ++++ KVF+ ++E++ +W+AMI +E + LF +M R G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 183 LPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
PD+ +L AC G + G R + + G+ +++ ++ + + G++ A
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 242 KLFKS--MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-YN 298
++ +E D W ++++ + ++E K + E +EP +L+++ Y
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYA 812
Query: 299 QLGRCDIAVDLMRKMESFGLTPD 321
LG+ + + ++M L D
Sbjct: 813 GLGKWEDVRKVRQRMNEMSLRKD 835
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 259/530 (48%), Gaps = 85/530 (16%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
W ++ + R E V + DM+ G PD + P +L+A D+E G+ IH+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 214 RHGM-CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR 272
+ G S+ V N+++ +Y KCG+ G K+F + ER+ V+WN++I+ C E A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 273 KYFDAMQEEGVEPGLVTW-------------------------------------NILIA 295
+ F M +E VEP T N L+A
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
Y +LG+ + L+ SFG D+ TW++++S Q + AL+ LR+M+L GVEP
Sbjct: 245 MYGKLGKLASSKVLL---GSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKM-SLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
+ T+ E+H +K SL ++ G++L+DMY C + + +R+
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS-PPNVVTWNALITGYMQSGA 473
FD M++R + WN +I GY +A LF+ M++S N T ++ ++SGA
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 474 ----------------------EDQALDLFKRIEKD-------GKIK-RNVASWNSLIAG 503
++ +D++ R+ K GK++ R++ +WN++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 504 FLQSGQKDKAMQIFRRMQFFQ-----------IAPNSVTVLSILPAFANLVAGKKVKEIH 552
++ S + A+ + +MQ + + PNS+T+++ILP+ A L A K KEIH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
A++ NL ++++V + L+D YAK G L SR++FD +P K++I+WN+++
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 590
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 244/517 (47%), Gaps = 55/517 (10%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIE---VGRELHAR 111
++ ++ LCS A+ + ++ + T ++++ +C + E +G+++HA
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G +N F+ LV+MY K G L+ ++ + R+L TW+ ++ + + + E +
Sbjct: 228 GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG-MCSSIRVNNSIMAV 230
+ +MV G PDEF + +L AC L TG+ +H+ A+++G + + V ++++ +
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE--------- 281
Y C ++ +++F M +R WNA+I G+ QN ++A F M+E
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 282 --GVEPGLV-------------------------TWNILIASYNQLGRCDIAVDLMRKME 314
GV P V N L+ Y++LG+ DIA+ + KME
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML-----------LSGVEPNSITVXXX 363
D+ TW++MI+G+ AL LL KM ++PNSIT+
Sbjct: 468 D----RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
EIH +K +L DV G++L+DMY+KCG L+ ++++FD + +++V
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
+WN II Y G +A +L M PN VT+ ++ SG D+ L +F
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
++ D ++ + + ++ ++G+ +A Q+ M
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 166/618 (26%), Positives = 268/618 (43%), Gaps = 97/618 (15%)
Query: 7 ILP-TKSRPPLSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNG 65
+LP ++ + P + + S E +AS A S ++S S RS P++ L +
Sbjct: 21 LLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQS-RS---PEWWIDLLRSKVRSN 76
Query: 66 PLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF-VE 123
L +AV + G K + LL++ D +E+G+++HA + G V+ V
Sbjct: 77 LLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVA 136
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA-CSREKSWEEVVDLFYDMVRHGF 182
LV++Y KCG KVFD + ERN +W+++I + CS EK WE ++ F M+
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK-WEMALEAFRCMLDENV 195
Query: 183 LPDEFLLPKILQACGKCG---DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P F L ++ AC L G+ +H+ +R G +S + N+++A+Y K G++
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLAS 254
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
+K L S RD VTWN +++ CQN + +A +Y M EGVEP T + ++ + +
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 300 L----------------GRCD-------IAVDLM---------RKMESFGLTPDVYTWSS 327
L G D VD+ R++ + W++
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 328 MISGFTQKGRTYHALDLLRKMLLS-GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
MI+G++Q AL L M S G+ NS T+ IHG VK
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
L D N+L+DMYS+ G ++ A RIF M +RD+ +WNT+I GY + A L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 447 MKMQDSDS-----------PPNVVTW---------------------------------- 461
KMQ+ + PN +T
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 462 -NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+AL+ Y + G + +F +I ++NV +WN +I + G +A+ + R M
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIP-----QKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 521 QFFQIAPNSVTVLSILPA 538
+ PN VT +S+ A
Sbjct: 610 MVQGVKPNEVTFISVFAA 627
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 34/290 (11%)
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL-VDDVLTGNSLIDMYSKCG 406
M++ G++P++ +IH K VD V N+L+++Y KCG
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
D A ++FD + ER+ SWN++I C A E F M D + P+ T +++T
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 467 ------------------------GYMQSGAEDQALDLFKRIEKDGKIK--------RNV 494
G + S + + ++ ++ K K R++
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
+WN++++ Q+ Q +A++ R M + P+ T+ S+LPA ++L + KE+H
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 555 ALRRNLVSEIS-VSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
AL+ + E S V + L+D Y ++ RR+FDG+ + I WN M++
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 11/243 (4%)
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEA 139
K IT M +L SC + G+E+HA + L +V V + LV MY+KCG L +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA--VGSALVDMYAKCGCLQMS 571
Query: 140 RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKC 199
RKVFD++ ++N+ TW+ +I A + +E +DL M+ G P+E + AC
Sbjct: 572 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 200 GDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM--DERDSVTWN 256
G ++ G R+ + + +G+ S ++ + + G + A +L M D + W+
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-YNQLGRCDIAVDLMRKMES 315
+++ + ++E A +EP + + +L+A+ Y+ G D A ++ R M+
Sbjct: 692 SLLGASRIHNNLEIGE--IAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749
Query: 316 FGL 318
G+
Sbjct: 750 QGV 752
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/624 (27%), Positives = 289/624 (46%), Gaps = 82/624 (13%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+P PK C +G L++A LD ++E S V Y +L+ C R + GR+
Sbjct: 52 VPSPKLA-------CFDGVLTEAFQRLD-VSENNSPVEAFAY--VLELCGKRRAVSQGRQ 101
Query: 108 LHARI--GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
LH+RI F+ KLV MY KCG L +A KVFDEM +R F W+ MIGA
Sbjct: 102 LHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNG 161
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
+ L+++M G P +L+AC K D+ +G +HS+ ++ G S+ + N
Sbjct: 162 EPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVN 221
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER-DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+++++YAK ++ A++LF E+ D+V WN+I++ + +G + + F M G
Sbjct: 222 ALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA 281
Query: 285 PG------------------------------------LVTWNILIASYNQLGRCDIAVD 308
P L N LIA Y + G+ A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
++R+M + DV TW+S+I G+ Q AL+ M+ +G + + +++
Sbjct: 342 ILRQMNN----ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
E+H +K ++ GN+LIDMYSKC R F M+++D+ SW T
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 457
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI---------------------TG 467
+I GY +A ELF + + + +++ G
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKR--------NVASWNSLIAGFLQSGQKDKAMQIFRR 519
+ + +++ +D++ + G R +V SW S+I+ +G + +A+++FRR
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
M ++ +SV +L IL A A+L A K +EIHC LR+ E S++ ++D YA G+
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 580 LMYSRRIFDGLPLKDIISWNIMLS 603
L ++ +FD + K ++ + M++
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMIN 661
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/564 (22%), Positives = 256/564 (45%), Gaps = 53/564 (9%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI--GLV 115
L+ ++G + + + + G T ++ L +C ++G+E+HA +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
+ +V L++MY++CG + +A ++ +M ++ TW+++I + ++E ++ F
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
DM+ G DE + I+ A G+ +L G +H+ I+HG S+++V N+++ +Y+KC
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE-PGLVTWNILI 294
+ + F M ++D ++W +I G+ QN +A + F + ++ +E ++ +IL
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 295 AS--------------------------YNQL----GRCDIAVDLMRKMESFGLTPDVYT 324
AS N+L G+C R ES DV +
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIK-GKDVVS 554
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+SMIS G A++L R+M+ +G+ +S+ + EIH +
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK-AY 443
+ + +++DMY+ CGDL++A+ +FD + + + + ++I Y G CGK A
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG-CGKAAV 673
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
ELF KM+ + P+ +++ AL+ +G D+ K +E + +++ + L+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
G+ + ++ F ++ + P + ++L A C + + E
Sbjct: 734 L---GRANCVVEAFEFVKMMKTEPTAEVWCALLAA--------------CRSHSEKEIGE 776
Query: 564 ISVSNILIDSYAKSGNLMYSRRIF 587
I+ +L GNL+ +F
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVF 800
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 224/418 (53%), Gaps = 1/418 (0%)
Query: 105 GRELHARIGLVGNVN-PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
GR LHA + G + KLV+ Y +CG + +ARKVFDEM +R++ MIGAC+R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
++E +D F +M + G D F++P +L+A D E G++IH + ++ S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+S++ +Y+K GE+G A+K+F + E+D V +NA+I+G+ N ++A M+ G+
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
+P ++TWN LI+ ++ + + +++ M G PDV +W+S+ISG + A D
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD 274
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
++ML G+ PNS T+ EIHG V L D ++L+DMY
Sbjct: 275 AFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG 334
Query: 404 KCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
KCG + A +F ++ ++N++I Y + G KA ELF +M+ + + +T+ A
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
++T +G D +LF ++ +I + + ++ ++G+ +A ++ + M+
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR 452
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 1/275 (0%)
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
MI + G +LD R+M G++ ++ V IH + +K S
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
D +SLIDMYSK G++ A+++F + E+D+ +N +I GY + +A L
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
M+ P+V+TWNALI+G+ E++ ++ + + DG K +V SW S+I+G + +
Sbjct: 208 DMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDG-YKPDVVSWTSIISGLVHN 266
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS 567
Q +KA F++M + PNS T++++LPA L K KEIH ++ L V
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ L+D Y K G + + +F P K +++N M+
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 201/483 (41%), Gaps = 108/483 (22%)
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
++++A G+ GR++H+ + G+ R+ ++ Y +CG++ A+K+F M +R
Sbjct: 21 ELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKR 80
Query: 251 DSVTWNAIITGFC-QNGDIEQARKYFDAMQEEGVE-PGLVTWNILIASYNQLGR------ 302
D ++ ++ G C +NG +++ +F M ++G++ + ++L AS N L R
Sbjct: 81 D-ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMI 139
Query: 303 -CDI--------------AVDLMRKMESFGLTPDVYT---------WSSMISGFTQKGRT 338
C + +D+ K G V++ +++MISG+ +
Sbjct: 140 HCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQA 199
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
AL+L++ M L G++P DV+T N+L
Sbjct: 200 DEALNLVKDMKLLGIKP-----------------------------------DVITWNAL 224
Query: 399 IDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
I +S + E I ++M Y+ DV SW +II G H KA++ F +M
Sbjct: 225 ISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL 284
Query: 455 PPNVVTWNALI-----TGYMQSGAEDQALDLFKRIEKDGKI------------------- 490
PN T L+ YM+ G E + +E G +
Sbjct: 285 YPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMI 344
Query: 491 ------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVA 544
K+ ++NS+I + G DKA+++F +M+ + +T +IL A ++ A
Sbjct: 345 LFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSH--A 402
Query: 545 GKKVKEIHCCALRRN---LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNI 600
G + L +N +V + ++D ++G L+ + + + ++ D+ W
Sbjct: 403 GLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGA 462
Query: 601 MLS 603
+L+
Sbjct: 463 LLA 465
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 213/422 (50%), Gaps = 40/422 (9%)
Query: 65 GPLSDAVAILDSLAEQGSK-VRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVE 123
G +A A+ + + G + ++ LL C R E+GR++H + VG N VE
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE 221
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
+ LV Y++CG L+ A + FD M E+++ +W+A+I ACSR+ + + +F M+ H FL
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P+EF + IL+AC + L GR +HS+ ++ + + + V S+M +YAKCGE+ +K+
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ------------------------ 279
F M R++VTW +II + G E+A F M+
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 280 -----------EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
+ +E + + L+ Y + G A ++++++ S DV +W++M
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS----RDVVSWTAM 457
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
ISG + G ALD L++M+ GVEPN T IH I K
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+ +V G++LI MY+KCG + A R+FD M E+++ SW +I GY GFC +A +L +
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 449 MQ 450
M+
Sbjct: 578 ME 579
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 202/460 (43%), Gaps = 69/460 (15%)
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
IH++A++ I N++++ + G++ +A+K+F SM E+++VTW A+I G+ + G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 268 IEQARKYFDAMQEEGVE-----------------------------------PGLVTWNI 292
++A F+ + G+ L+ +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESS 223
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
L+ Y Q G A+ ME DV +W+++IS ++KG A+ + ML
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEE----KDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
PN TV ++H + VK + DV G SL+DMY+KCG++ +
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI-----TG 467
++FD M R+ +W +II + GF +A LF M+ N +T +++ G
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 468 YMQSGAEDQALDLFKRIEKDGKI-------------------------KRNVASWNSLIA 502
+ G E A + IEK+ I R+V SW ++I+
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS 562
G G + +A+ + M + PN T S L A AN + + IH A + + +S
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 563 EISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ V + LI YAK G + + R+FD +P K+++SW M+
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 210/498 (42%), Gaps = 73/498 (14%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF-LP 184
L+S + G L ARKVFD M E+N TW+AMI + +E LF D V+HG
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+E + +L C + + E GR +H ++ G+ + I V +S++ YA+CGE+ A + F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALRAF 241
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT-WNILIASYNQ---- 299
M+E+D ++W A+I+ + G +A F M P T +IL A +
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 300 LGR--CDIAVDLMRKMESFGLTP--DVY----------------------TWSSMISGFT 333
GR + V M K + F T D+Y TW+S+I+
Sbjct: 302 FGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA 361
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
++G A+ L R M + N++TV E+H +K S+ +V
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVY 421
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
G++L+ +Y KCG+ A + + RDV SW +I G G +A + +M
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 454 SPPNVVTW-----------------------------------NALITGYMQSGAEDQAL 478
PN T+ +ALI Y + G +A
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF 541
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+F D ++N+ SW ++I G+ ++G +A+++ RM+ + +IL
Sbjct: 542 RVF-----DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 539 FANLVAGKKVKEIHCCAL 556
++ + V+ C L
Sbjct: 597 CGDIELDEAVESSATCYL 614
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 5/219 (2%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV---NPFVETK 125
+A+++ + + +T +++L++C + +G+ELHA+I + N N ++ +
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI--IKNSIEKNVYIGST 425
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
LV +Y KCG +A V ++ R++ +W+AMI CS E +D +M++ G P+
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
F L+AC L GR IHS+A ++ S++ V ++++ +YAKCG + A ++F
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
SM E++ V+W A+I G+ +NG +A K M+ EG E
Sbjct: 546 SMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 156/350 (44%), Gaps = 48/350 (13%)
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKM 348
N LI+S +LG DL+ + F P+ TW++MI G+ + G A L
Sbjct: 121 NNLISSCVRLG------DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDY 174
Query: 349 LLSGVE-PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
+ G+ N ++HG VK+ V +++ +SL+ Y++CG+
Sbjct: 175 VKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGE 233
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
L +A R FDMM E+DV SW +I G KA +F+ M + PN T +
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFT----VCS 289
Query: 468 YMQSGAEDQALDLFKRIEK----------------------------------DGKIKRN 493
+++ +E++AL +++ DG RN
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
+W S+IA + G ++A+ +FR M+ + N++TV+SIL A ++ A KE+H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 554 CALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ ++ + + + L+ Y K G + + LP +D++SW M+S
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ S G S+A+ L + ++G + P TY + L++C + + + +GR +H+ I
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKK 514
Query: 116 GNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
+ N FV + L+ MY+KCG +SEA +VFD M E+NL +W AMI +R E + L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
Y M GF D+++ IL CGD+E + S A
Sbjct: 575 MYRMEAEGFEVDDYIFATILST---CGDIELDEAVESSA 610
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 40/260 (15%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IH + +K + GN+LI + GDL A+++FD M E++ +W +I GY G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 439 CGKAYELF-------MKMQDSD----------------------------SPPNVVTWNA 463
+A+ LF ++ + N++ ++
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESS 223
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
L+ Y Q G AL F +E+ ++V SW ++I+ + G KA+ +F M
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEE-----KDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
PN TV SIL A + A + +++H ++R + +++ V L+D YAK G +
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 584 RRIFDGLPLKDIISWNIMLS 603
R++FDG+ ++ ++W +++
Sbjct: 339 RKVFDGMSNRNTVTWTSIIA 358
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 262/538 (48%), Gaps = 46/538 (8%)
Query: 102 IEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA 160
+ +G+ +H++ ++G + + +V +Y+KC +S A K FD + E+++ W++M+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 161 CSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
S +V+ F + + P++F +L C + ++E GR IH I+ G+ +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
+++ +YAKC + A+++F+ + + ++V W + +G+ + G E+A F+ M++
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
EG P + + +I +Y +LG+ A L +M S PDV W+ MISG ++G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETV 310
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A++ M S V+ T+ +H +K+ L ++ G+SL+
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS------ 454
MYSKC +EAA ++F+ + E++ WN +I GY H G K ELFM M+ S
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 455 -----------------------------PPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
N+ NAL+ Y + GA + A +F+R+
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM- 489
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
R+ +WN++I ++Q + +A +F+RM I + + S L A ++
Sbjct: 490 ----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ K++HC +++ L ++ + LID Y+K G + +R++F LP ++S N +++
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 225/467 (48%), Gaps = 40/467 (8%)
Query: 53 FMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI 112
F +A + NG + + + G + T+ +LL +C +E+G + H+ I
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 113 ---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
L N+ FV LV MY+KCG L +AR++F+ M +R+ TW+ +IG+ ++++ E
Sbjct: 455 IKKKLAKNL--FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
DLF M G + D L L+AC L G+ +H ++++ G+ + +S++
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 230 VYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
+Y+KCG + A+K+F S+ E V+ NA+I G+ QN ++E+A F M GV P +T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEIT 631
Query: 290 WNILIAS-------------YNQLGRCDIAVD--------LMRKMESFGLT--------- 319
+ ++ + + Q+ + + + L M S G+T
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 320 ---PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
+ W+ M+SG +Q G AL ++M GV P+ T
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGYCH 435
IH + ++ D LT N+LIDMY+KCGD++ + ++FD M R +V SWN++I GY
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK 482
G+ A ++F M+ S P+ +T+ ++T +G +F+
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFE 858
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 237/530 (44%), Gaps = 93/530 (17%)
Query: 102 IEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI 158
+++G +HA ++GL N+ +V + LVSMYSKC + A KVF+ + E+N W+AMI
Sbjct: 343 LDLGLVVHAEAIKLGLASNI--YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ +V++LF DM G+ D+F +L C DLE G HS+ I+ +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
++ V N+++ +YAKCG + A+++F+ M +RD+VTWN II + Q+ + +A F M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 279 Q-----------------------------------EEGVEPGLVTWNILIASYNQLGRC 303
+ G++ L T + LI Y+ +C
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS---KC 577
Query: 304 DIAVDLMRKMESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
I D RK+ F P+ V + +++I+G++Q A+ L ++ML GV P+ IT
Sbjct: 578 GIIKD-ARKV--FSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFA 633
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDD-VLTGNSLIDMYSKC-GDLEAAQRIFDMMY 419
+ HG K + G SL+ MY G EA ++
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 420 ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------------ 461
+ + W ++ G+ GF +A + + +M+ P+ T+
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 462 -----------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
N LI Y + G + +F + + + NV SWNSLI G+
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR----RSNVVSWNSLINGY 809
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN---LVAGKKVKEI 551
++G + A++IF M+ I P+ +T L +L A ++ + G+K+ E+
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEM 859
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 147/649 (22%), Positives = 251/649 (38%), Gaps = 120/649 (18%)
Query: 20 SYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAE 79
SY+ QF+F+ NS L+ S G + SL E
Sbjct: 112 SYAEKQFDFLEKDVTAWNS------------------MLSMYSSIGKPGKVLRSFVSLFE 153
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
T+ +L +C +E GR++H + +G N + LV MY+KC +S+
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
AR+VF+ + + N W+ + + EE V +F M G PD ++
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN---- 269
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
Y + G++ A+ LF M D V WN +
Sbjct: 270 -------------------------------TYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL 318
I+G + G A +YF M++ V+ T ++++ + D+ + + + GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 319 TPDVYT-------------------------------WSSMISGFTQKGRTYHALDLLRK 347
++Y W++MI G+ G ++ ++L
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
M SG + T + H I +K L ++ GN+L+DMY+KCG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ------DSDSPPNVVTW 461
LE A++IF+ M +RD +WNTIIG Y +A++LF +M D + +
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 462 NALITGYMQSGAEDQALDLFKRIEKD--------------GKIKR-----------NVAS 496
+ G Q G + L + +++D G IK +V S
Sbjct: 539 CTHVHGLYQ-GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 597
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
N+LIAG+ Q+ ++A+ +F+ M + P+ +T +I+ A + + H
Sbjct: 598 MNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 557 RRNLVSEISVSNI-LIDSYAKSGNLMYSRRIFDGLPL-KDIISWNIMLS 603
+R SE I L+ Y S + + +F L K I+ W M+S
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 40/319 (12%)
Query: 51 PKFMDAQLNQLC---SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
P++ +N L S L +AV + + +G IT+ ++++C + + +G +
Sbjct: 591 PEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 108 LHARIGLVG--NVNPFVETKLVSMYSKCGHLSEARKVFDEMRE-RNLFTWSAMIGACSRE 164
H +I G + ++ L+ MY ++EA +F E+ +++ W+ M+ S+
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
+EE + + +M G LPD+ +L+ C L GR IHS+ +
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSV-TWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N+++ +YAKCG+M + ++F M R +V +WN++I G+ +NG E A K FD+M++ +
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 284 EPGLVTW--------------------NILIASYNQLGRCD---IAVDLMRK-------- 312
P +T+ ++I Y R D VDL+ +
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 313 --MESFGLTPDVYTWSSMI 329
+E+ L PD WSS++
Sbjct: 891 DFIEAQNLKPDARLWSSLL 909
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 190/440 (43%), Gaps = 45/440 (10%)
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
L G+ +HS ++ G+ S R+ N+I+ +YAKC ++ +A+K F + E+D WN++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+ G + + F ++ E + P T++I++++ + + + M GL +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
Y +++ + + R A R++ V+PN++ +
Sbjct: 195 SYCGGALVDMYAKCDRISDA----RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
D L ++I+ Y + G L+ A+ +F M DV +WN +I G+ G
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 442 AYELFMKMQDSDS-----------------------------------PPNVVTWNALIT 466
A E F M+ S N+ ++L++
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
Y + + A +F+ +E+ +N WN++I G+ +G+ K M++F M+
Sbjct: 371 MYSKCEKMEAAAKVFEALEE-----KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
+ T S+L A + + H +++ L + V N L+D YAK G L +R+I
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 587 FDGLPLKDIISWNIMLSQEI 606
F+ + +D ++WN ++ +
Sbjct: 486 FERMCDRDNVTWNTIIGSYV 505
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI-GLVGNVNPFV 122
NG +A+ + G T++ +L+ C + GR +H+ I L +++
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRER-NLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ MY+KCG + + +VFDEMR R N+ +W+++I ++ E+ + +F M +
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAI-RHGMCSSIRVNNSIMAVYAKCGEMGFA 240
+PDE +L AC G + GR I + I ++G+ + + ++ + + G + A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 241 KKLFKSMDER-DSVTWNAIITGFCQ-NGD 267
++ + + D+ W++++ G C+ +GD
Sbjct: 890 DDFIEAQNLKPDARLWSSLL-GACRIHGD 917
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 233/475 (49%), Gaps = 42/475 (8%)
Query: 84 VRPITY--MNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEAR 140
V P+ Y LL+ C D + VG+E+H + G +++ F T L +MY+KC ++EAR
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 141 KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
KVFD M ER+L +W+ ++ S+ +++ M P + +L A
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
+ G+ IH A+R G S + ++ +++ +YAKCG + A++LF M ER+ V+WN++I
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTW------------------------------ 290
+ QN + ++A F M +EGV+P V+
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 291 -----NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
N LI+ Y + D A + K++S L +W++MI GF Q GR AL+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYF 426
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+M V+P++ T IHG+ ++ L +V +L+DMY+KC
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 406 GDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
G + A+ IFDMM ER V +WN +I GY GF A ELF +MQ PN VT+ ++I
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ SG + L F ++++ I+ ++ + +++ ++G+ ++A +M
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 219/471 (46%), Gaps = 71/471 (15%)
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
+C L+ R I + ++G+ +++++ + G + A ++F+ +D + +V ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-------------YNQLGRCD 304
++ GF + D+++A ++F M+ + VEP + + L+ + L +
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 305 IAVDL--MRKMES--------------FGLTP--DVYTWSSMISGFTQKGRTYHALDLLR 346
++DL M +E+ F P D+ +W+++++G++Q G AL++++
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
M ++P+ IT+ EIHG ++ V +L+DMY+KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP---------- 456
LE A+++FD M ER+V SWN++I Y +A +F KM D P
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 457 -------------------------NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
NV N+LI+ Y + D A +F +++
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS----- 400
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEI 551
R + SWN++I GF Q+G+ A+ F +M+ + P++ T +S++ A A L K I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 552 HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
H +R L + V+ L+D YAK G +M +R IFD + + + +WN M+
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 238/542 (43%), Gaps = 68/542 (12%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F +TKLVS++ + G + EA +VF+ + + + M+ ++ ++ + F M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
P + +L+ CG +L G+ IH + ++ G + + +YAKC ++ A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW---------- 290
+K+F M ERD V+WN I+ G+ QNG A + +M EE ++P +T
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 291 ----------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
NI A + +C +++ R++ L +V +W+SM
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG-SLETARQLFDGMLERNVVSWNSM 308
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
I + Q A+ + +KML GV+P ++V IH + V++ L
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+V NSLI MY KC +++ A +F + R + SWN +I G+ G A F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQA----------------------LDLF----- 481
M+ P+ T+ ++IT + A +D++
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 482 ---KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
R+ D +R+V +WN++I G+ G A+++F MQ I PN VT LS++ A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 539 FANLVAGKKVKEIHCC-ALRRNLVSEISVSNI--LIDSYAKSGNLMYSRRIFDGLPLKDI 595
++ +G + C ++ N E+S+ + ++D ++G L + +P+K
Sbjct: 549 CSH--SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 596 IS 597
++
Sbjct: 607 VN 608
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 36/330 (10%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNP 120
NG A+ ++ S+ E+ K IT +++L + I VG+E+H R G VN
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN- 272
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+ T LV MY+KCG L AR++FD M ERN+ +W++MI A + ++ +E + +F M+
Sbjct: 273 -ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G P + + L AC GDLE GR IH +++ G+ ++ V NS++++Y KC E+ A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
+F + R V+WNA+I GF QNG A YF M+ V+P T+ +I + +L
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 301 GRCDIA----------------------VDLMRKMESFGLTPDVY---------TWSSMI 329
A VD+ K + + ++ TW++MI
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G+ G AL+L +M ++PN +T
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
L++ + + G+ D+A +F+ I+ K NV +++++ GF + DKA+Q F RM++
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDS----KLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 524 QIAP---NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+ P N +L + A L GK EIH ++ ++ L + YAK +
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGK---EIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 581 MYSRRIFDGLPLKDIISWNIMLS 603
+R++FD +P +D++SWN +++
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVA 209
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 269/589 (45%), Gaps = 84/589 (14%)
Query: 91 NLLQSCI------DRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARK 141
NL +SCI + + +G +H + GL+ N++ + L+S+Y K + ARK
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLD--LCNNLLSLYLKTDGIWNARK 79
Query: 142 VFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
+FDEM R +F W+ MI A ++ + + + LF +M+ G P+EF ++++C D
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
+ G +H I+ G + V +S+ +Y+KCG+ A +LF S+ D+++W +I+
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG-------RCDIAV------- 307
+A +++ M + GV P T+ L+ + + LG +I V
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNV 259
Query: 308 -----------------DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
D +R + S G DV+ W+S++SGF + R A+ +M
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS 318
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
G++PN+ T +IH +K+ D GN+L+DMY KC E
Sbjct: 319 LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV 378
Query: 411 -AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW-------- 461
A R+F M +V SW T+I G GF + L M+M + PNVVT
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 462 ---------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
N+L+ Y S D A ++ + ++ +R+
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-----RRDN 493
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
++ SL+ F + G+ + A+ + M I + +++ + A ANL A + K +HC
Sbjct: 494 ITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCY 553
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+++ SV N L+D Y+K G+L ++++F+ + D++SWN ++S
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 225/507 (44%), Gaps = 45/507 (8%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLV 127
+A+ + + G T++ LL + +E G+ +H+ I + G +N ++T LV
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 128 SMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEF 187
YS+ + +A +V + E+++F W++++ R +E V F +M G P+ F
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF-AKKLFKS 246
IL C L+ G+ IHS I+ G S V N+++ +Y KC A ++F +
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW---------------- 290
M + V+W +I G +G ++ M + VEP +VT
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 291 -------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
N L+ +Y + D A +++R M+ D T++S+++
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR----RDNITYTSLVTR 502
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
F + G+ AL ++ M G+ + +++ +H VK
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
NSL+DMYSKCG LE A+++F+ + DV SWN ++ G GF A F +M+
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
++ P+ VT+ L++ D L+ F+ ++K I+ V + L+ ++G+ +
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 512 KAMQIFRRMQFFQIAPNSVTVLSILPA 538
+A + M + PN++ ++L A
Sbjct: 683 EATGVVETM---HLKPNAMIFKTLLRA 706
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 235/543 (43%), Gaps = 74/543 (13%)
Query: 67 LSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETK 125
+ A+++ + + G+ T+ ++++SC I G +H + G N V +
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L +YSKCG EA ++F ++ + +W+ MI + + W E + + +MV+ G P+
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
EF K+L A G LE G+ IHS I G+ ++ + S++ Y++ +M A ++
Sbjct: 225 EFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
S E+D W ++++GF +N ++A F M+ G++P T++ +++ + + D
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 306 A----------------------VDLMRKMES--------FG--LTPDVYTWSSMISGFT 333
VD+ K + FG ++P+V +W+++I G
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
G LL +M+ VEPN +T+ EIH ++ + +++
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM---- 449
GNSL+D Y+ ++ A + M RD ++ +++ + G A + M
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 450 --QDSDSPPNVVT-----------------------------WNALITGYMQSGAEDQAL 478
D S P ++ N+L+ Y + G+ + A
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+F+ I +V SWN L++G +G A+ F M+ + P+SVT L +L A
Sbjct: 584 KVFEEIATP-----DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Query: 539 FAN 541
+N
Sbjct: 639 CSN 641
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 199/485 (41%), Gaps = 82/485 (16%)
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
+IL C + G IH I+ G+ ++ + N+++++Y K + A+KLF M R
Sbjct: 29 RILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-------------- 296
W +I+ F ++ + A F+ M G P T++ ++ S
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 297 ---------------------YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
Y++ G+ A +L +++ D +W+ MIS
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN----ADTISWTMMISSLVGA 203
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
+ AL +M+ +GV PN T IH + + +V+
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKT-IHSNIIVRGIPLNVVLK 262
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
SL+D YS+ +E A R+ + E+DV+ W +++ G+ +A F++M+
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 456 PNVVTW-----------------------------------NALITGYMQ-SGAEDQALD 479
PN T+ NAL+ YM+ S +E +A
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 480 LFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAF 539
+F + + NV SW +LI G + G + M ++ PN VT+ +L A
Sbjct: 383 VFGAM-----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 540 ANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
+ L ++V EIH LRR++ E+ V N L+D+YA S + Y+ + + +D I++
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 600 IMLSQ 604
++++
Sbjct: 498 SLVTR 502
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 169/364 (46%), Gaps = 8/364 (2%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
L +G + D +L + ++ + +T +L++C + E+HA + L +V+
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL-LRRHVDG 460
Query: 121 --FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
V LV Y+ + A V M+ R+ T+++++ + E + + M
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G D+ LP + A G LETG+ +H +++ G + V NS++ +Y+KCG +
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
AKK+F+ + D V+WN +++G NG I A F+ M+ + EP VT+ IL+++ +
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 299 QLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
D+ ++ + M+ + + P V + ++ + GR A ++ M L +PN+
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHL---KPNA 697
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
+ ++ G+ ++ D L L D+Y + G E AQ+ ++
Sbjct: 698 MIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALY-ILLADLYDESGKPELAQKTRNL 756
Query: 418 MYER 421
M E+
Sbjct: 757 MTEK 760
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 229/442 (51%), Gaps = 43/442 (9%)
Query: 98 DRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSA 156
D + G++LH + G N +V+ LV MYS CG + AR VFD + ++F+W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 157 MIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG 216
MI +R K +EE ++L +M R+ P L +L AC K D + + +H
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFD 276
S+R+ N+++ YA CGEM A ++F+SM RD ++W +I+ G+ + G+++ AR YFD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
M ++W I+I Y + G + ++++ R+M+S G+ PD +T S+++ G
Sbjct: 327 QMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
+L+ + + + + ++ N I +DV+ GN
Sbjct: 383 ----SLE-IGEWIKTYIDKNKIK------------------------------NDVVVGN 407
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
+LIDMY KCG E AQ++F M +RD ++W ++ G + G +A ++F +MQD P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ +T+ +++ SG DQA F ++ D +I+ ++ + ++ ++G +A +I
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 517 FRRMQFFQIAPNSVTVLSILPA 538
R+M + PNS+ ++L A
Sbjct: 528 LRKM---PMNPNSIVWGALLGA 546
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 186/447 (41%), Gaps = 76/447 (17%)
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK--CGEMGFAKKLFKSMD 248
+ + G C + + +HS +I G+ + + + G + +A KLF +
Sbjct: 36 RFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95
Query: 249 ERDSVTWNAIITGFCQ-NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG------ 301
E D V WN +I G+ + + D E R Y + M +EGV P T+ L+ + G
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLN-MLKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 302 ---RCDIA-----------------------VDLMRKMESFGLTPDVYTWSSMISGFTQK 335
C + +D+ R + DV++W+ MISG+ +
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
+++LL +M + V P S+T+ +H + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
N+L++ Y+ CG+++ A RIF M RDV SW +I+ GY G A F +M D
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR- 333
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
++W +I GY+++G +++L++F+ ++ G I
Sbjct: 334 ---ISWTIMIDGYLRAGCFNESLEIFREMQSAGMI------------------------- 365
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYA 575
P+ T++S+L A A+L + + + I + + +++ V N LID Y
Sbjct: 366 -----------PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 576 KSGNLMYSRRIFDGLPLKDIISWNIML 602
K G ++++F + +D +W M+
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 36 ANSNYVSMSIRS-LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQ 94
A + + M +R + + +D L C N +++ I + G T +++L
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFN----ESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 95 SCIDRDCIEVGRELHARIGLVGNVNPFV-ETKLVSMYSKCGHLSEARKVFDEMRERNLFT 153
+C +E+G + I N V L+ MY KCG +A+KVF +M +R+ FT
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 436
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
W+AM+ + +E + +F+ M PD+ +L AC G ++ R +
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFA--- 493
Query: 214 RHGMCSSIRVNNSIMAVYAKC-----GEMGFAKKLFKSMDER----DSVTWNAII 259
M S R+ S+ V+ C G G K+ ++ + + +S+ W A++
Sbjct: 494 --KMRSDHRIEPSL--VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
V W + + G++ A LF +I + +V WN++I G+ + + ++++
Sbjct: 74 VFWCSRLGGHVS-----YAYKLFVKIPEP-----DVVVWNNMIKGWSKVDCDGEGVRLYL 123
Query: 519 RMQFFQIAPNSVTVLSILPAFAN----LVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
M + P+S T +L L GKK +HC ++ L S + V N L+ Y
Sbjct: 124 NMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK---LHCHVVKFGLGSNLYVQNALVKMY 180
Query: 575 AKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ G + +R +FD +D+ SWN+M+S
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 239/510 (46%), Gaps = 40/510 (7%)
Query: 48 LPYPKFM--DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG 105
+P P F L C N + V + D L + G + I + L++C + ++ G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 106 RELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
+++H ++ V + + V T L+ MY+KCG + A KVF+++ RN+ W++MI +
Sbjct: 162 KKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
EE + LF M + L +E+ ++ AC K L G+ H ++ G+ S +
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
S++ +Y KCG++ A+++F D V W A+I G+ NG + +A F M+ ++P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 286 GLVTWNILIASYN-----QLGR-------------CDIAVDLMR---------------K 312
VT +++ +LGR ++A L+ +
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
MES D+ W+S+ISGF+Q G + AL L +M V PN +TV
Sbjct: 402 MES---EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 373 XXXXXEIHGIGVKMSLV--DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTII 430
+H VK+ + V G +L+D Y+KCGD ++A+ IFD + E++ +W+ +I
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
GGY G + ELF +M PN T+ ++++ +G ++ F + KD
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ + ++ ++G+ ++A+ I +M
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 250/571 (43%), Gaps = 78/571 (13%)
Query: 92 LLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL 151
LL C + D + + GL+G+++ + TKLVS+Y G+ +AR VFD++ E +
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDIS--IATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 152 FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSV 211
+ W M+ K EVV L+ +++HGF D+ + K L+AC + DL+ G+ IH
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 212 AIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQA 271
++ ++ V ++ +YAKCGE+ A K+F + R+ V W ++I G+ +N E+
Sbjct: 168 LVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYN--------------------QLGRCDIA----- 306
F+ M+E V T+ LI + +L C +
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 307 ------VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
+ R++ + D+ W++MI G+T G AL L +KM ++PN +T+
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
+HG+ +K+ + D + N+L+ MY+KC A+ +F+M E
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT-------------------- 460
+D+ +WN+II G+ G +A LF +M PN VT
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 461 -----------------WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
AL+ Y + G A +F IE ++N +W+++I G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-----EKNTITWSAMIGG 520
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR-RNLVS 562
+ + G ++++F M Q PN T SIL A + + K+ + N
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTP 580
Query: 563 EISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
++D A++G L + I + +P++
Sbjct: 581 STKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 52/350 (14%)
Query: 300 LGRCDIAVDLMRKMESFGLT------------PDVYTWSSMISGFTQKGRTYHALDLLRK 347
+G IA L+ FG T PD Y W M+ + + + L
Sbjct: 73 MGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDL 132
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV-LTGNSLIDMYSKCG 406
++ G + I +IH VK+ D+V LTG L+DMY+KCG
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCG 190
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
++++A ++F+ + R+V W ++I GY C + LF +M++++ N T+ LI
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 467 GYMQSGAEDQA----------------------LDLFKRIEKDGKIKR--------NVAS 496
+ A Q LD++ + +R ++
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKEIHC 553
W ++I G+ +G ++A+ +F++M+ +I PN VT+ S+L NL G+ V H
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV---HG 367
Query: 554 CALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+++ + + +V+N L+ YAK ++ +F+ KDI++WN ++S
Sbjct: 368 LSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC---HA 436
HG+ L+ D+ L+ +Y G + A+ +FD + E D Y W ++ YC +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 437 GFCGKAYELFMK-------------------MQDSDSPPNV------------VTWNALI 465
K Y+L MK +QD D+ + V L+
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLL 183
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
Y + G A +F I RNV W S+IAG++++ ++ + +F RM+ +
Sbjct: 184 DMYAKCGEIKSAHKVFNDI-----TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
N T +++ A L A + K H C ++ + + L+D Y K G++ +RR
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 586 IFDGLPLKDIISWNIML 602
+F+ D++ W M+
Sbjct: 299 VFNEHSHVDLVMWTAMI 315
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 261/549 (47%), Gaps = 77/549 (14%)
Query: 57 QLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG 116
QL+ LC+NG L +A+ +L+S+ E V ++ L++ C + E G ++++ I L
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSS 123
Query: 117 NVNPFVE--TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ VE ++M+ + G+L +A VF +M ERNLF+W+ ++G +++ ++E + L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 175 YDMV-RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
+ M+ G PD + P +L+ CG DL G+ +H +R+G I V N+++ +Y K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
CG++ A+ LF M RD ++WNA+I+G+ +NG + + F AM+ V+P L+T +
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLT-------------------------------PDV 322
I++ LG + D+ + + G D+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
+W++MISG+ A+D R M V+P+ ITV E+H +
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
+K L+ V+ N+LI+MYSKC ++ A IF + ++V SW +II G C +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 443 YELFMKMQDSDSPPNVVTW-----------------------------------NALITG 467
+F++ PN +T NAL+
Sbjct: 484 L-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDM 542
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
Y++ G + A F +KD V SWN L+ G+ + GQ +++F RM ++ P
Sbjct: 543 YVRCGRMNTAWSQFNSQKKD------VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 528 NSVTVLSIL 536
+ +T +S+L
Sbjct: 597 DEITFISLL 605
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 221/472 (46%), Gaps = 35/472 (7%)
Query: 81 GSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEA 139
G K T+ +L++C + G+E+H + G ++ V L++MY KCG + A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 140 RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKC 199
R +FD M R++ +W+AMI E ++LF+ M PD L ++ AC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
GD GR IH+ I G I V NS+ +Y G A+KLF M+ +D V+W +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM--------- 310
+G+ N ++A + M ++ V+P +T ++++ LG D V+L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 311 --------------------RKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKM 348
+ ++ F P +V +W+S+I+G R + AL LR+M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
++ ++PN+IT+ EIH ++ + D N+L+DMY +CG +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
A F+ ++DV SWN ++ GY G ELF +M S P+ +T+ +L+ G
Sbjct: 550 NTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+S Q L F ++E G + N+ + ++ ++G+ +A + ++M
Sbjct: 609 SKSQMVRQGLMYFSKMEDYG-VTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 214/516 (41%), Gaps = 83/516 (16%)
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
G C+ K EE + L M DE + +++ C E G ++S+A+
Sbjct: 68 GLCANGK-LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR-KYFDA 277
+ + N+ +A++ + G + A +F M ER+ +WN ++ G+ + G ++A Y
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 278 MQEEGVEPGLVTW-----------------------------------NILIASYNQLGR 302
+ GV+P + T+ N LI Y + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 303 CDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXX 362
A L +M D+ +W++MISG+ + G + L+L M V+P+ +T+
Sbjct: 247 VKSARLLFDRMPR----RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 363 XXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD 422
+IH + D+ NSL MY G A+++F M +D
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 423 VYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPN------------------------ 457
+ SW T+I GY + KA + + M QDS P
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 458 ----------VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
V+ N LI Y + D+ALD+F I ++NV SW S+IAG +
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-----RKNVISWTSIIAGLRLN 477
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS 567
+ +A+ R+M+ + PN++T+ + L A A + A KEIH LR + + +
Sbjct: 478 NRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
N L+D Y + G + + F+ KD+ SWNI+L+
Sbjct: 537 NALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 258/562 (45%), Gaps = 89/562 (15%)
Query: 105 GRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGAC 161
GR+LH + G + +V+ V T LV Y K + + RKVFDEM+ERN+ TW+ +I
Sbjct: 112 GRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSI 221
+R +EV+ LF M G P+ F L + G G +H+V +++G+ +I
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ-- 279
V+NS++ +Y KCG + A+ LF + + VTWN++I+G+ NG +A F +M+
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 280 ------------------------EEGVEPGLVTW------NILIASYNQLGRCDIAVDL 309
E + +V + NI A +C +D
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
+R + G +V +W++MISGF Q A+DL +M GV PN T
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY----SVILT 405
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
E+H VK + G +L+D Y K G +E A ++F + ++D+ +W+ +
Sbjct: 406 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW---------------------------- 461
+ GY G A ++F ++ PN T+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 462 --------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
+AL+T Y + G + A ++FKR + ++++ SWNS+I+G+ Q GQ KA
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKR-----QREKDLVSWNSMISGYAQHGQAMKA 580
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPA--FANLV-AGKKVKEIHCCALRRNLVSEISVSN-I 569
+ +F+ M+ ++ + VT + + A A LV G+K +I +R ++ N
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI---MVRDCKIAPTKEHNSC 637
Query: 570 LIDSYAKSGNLMYSRRIFDGLP 591
++D Y+++G L + ++ + +P
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMP 659
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 226/537 (42%), Gaps = 79/537 (14%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
L A +FD+ R+ ++ +++ SR+ +E LF ++ R G D + +L+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
D GR +H I+ G + V S++ Y K +K+F M ER+ VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW------------------------- 290
+I+G+ +N ++ F MQ EG +P T+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 291 ----------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
N LI Y + G A L K E V TW+SMISG+ G
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLE 278
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
AL + M L+ V + + ++H VK + D +L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 401 MYSKCGDLEAAQRIF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
YSKC + A R+F ++ +V SW +I G+ +A +LF +M+ PN
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 460 TWN-------------------------------ALITGYMQSGAEDQALDLFKRIEKDG 488
T++ AL+ Y++ G ++A +F I+
Sbjct: 399 TYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD-- 456
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP--AFANLVAGK 546
+++ +W++++AG+ Q+G+ + A+++F + I PN T SIL A N G+
Sbjct: 457 ---KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K+ H A++ L S + VS+ L+ YAK GN+ + +F KD++SWN M+S
Sbjct: 514 G-KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 172/381 (45%), Gaps = 20/381 (5%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ N +AV + + +G + TY +L + + E+HA++
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKT 422
Query: 116 G-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ V T L+ Y K G + EA KVF + ++++ WSAM+ ++ E + +F
Sbjct: 423 NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 175 YDMVRHGFLPDEFLLPKILQACGKC-GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
++ + G P+EF IL C + G+ H AI+ + SS+ V+++++ +YAK
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
G + A+++FK E+D V+WN++I+G+ Q+G +A F M++ V+ VT+ +
Sbjct: 543 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 602
Query: 294 IASYNQLGRCDIA---VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
A+ G + D+M + + P S M+ +++ G+ A+ ++ M
Sbjct: 603 FAACTHAGLVEEGEKYFDIM--VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM-- 658
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
P T+ + + +D L +MY++ GD +
Sbjct: 659 --PNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 411 AQRIFDMMYERDV-----YSW 426
++ +M ER+V YSW
Sbjct: 717 RAKVRKLMNERNVKKEPGYSW 737
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 231/498 (46%), Gaps = 72/498 (14%)
Query: 107 ELHARIGLVGNVNP-FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
+ HARI G N ++ KL++ YS ++A V + + ++++S++I A ++ K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
+ + + +F M HG +PD +LP + + C + + G+ IH V+ G+ V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
S+ +Y +CG MG A+K+F M ++D VT +A++ + + G +E+ + M+ G+E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+V+WN +++ +N+ G AV + +K+ G PD T SS++
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS---------- 265
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+ML G IHG +K L+ D +++IDMY K
Sbjct: 266 -EMLNMG------------------------RLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 406 GDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
G + +F+ + N I G G KA E+F ++ NVV+W ++I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
G Q+G + +AL+L FR MQ +
Sbjct: 361 AGCAQNGKDIEALEL------------------------------------FREMQVAGV 384
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
PN VT+ S+LPA N+ A + H A+R +L+ + V + LID YAK G + S+
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 586 IFDGLPLKDIISWNIMLS 603
+F+ +P K+++ WN +++
Sbjct: 445 VFNMMPTKNLVCWNSLMN 462
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 251/542 (46%), Gaps = 86/542 (15%)
Query: 28 FIASTRVHANSNY-----VSMSIRSLPYPKF--MDAQLNQLCSNGPLSDAVAILDSLAEQ 80
+I++ + + SNY + ++S+P P + + L + ++ + +
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 81 G----SKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGH 135
G S V P NL + C + +VG+++H + G +++ FV+ + MY +CG
Sbjct: 111 GLIPDSHVLP----NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM------------------ 177
+ +ARKVFD M ++++ T SA++ A +R+ EEVV + +M
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 178 ----------------VRH-GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
+ H GF PD+ + +L + G L GRLIH I+ G+
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKD 286
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
V ++++ +Y K G + LF + ++ NA ITG +NG +++A + F+ +E
Sbjct: 287 KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
+ +E +V +W+S+I+G Q G+
Sbjct: 347 QTMEL-----------------------------------NVVSWTSIIAGCAQNGKDIE 371
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
AL+L R+M ++GV+PN +T+ HG V++ L+D+V G++LID
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
MY+KCG + +Q +F+MM +++ WN+++ G+ G + +F + + P+ ++
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ +L++ Q G D+ FK + ++ IK + ++ ++ ++G+ +A + + M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 521 QF 522
F
Sbjct: 552 PF 553
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 228/495 (46%), Gaps = 79/495 (15%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEM 146
T+ + ++C + + G HA + G + N FV LV+MYS+C LS+ARKVFDEM
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH-GFLPDEFLLPKILQACGKCGDLETG 205
++ +W+++I + ++ + +++F M G PD L +L C G G
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+ +H A+ M ++ V N ++ +YAKCG M A +F +M +D
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD-------------- 294
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
+V+WN ++A Y+Q+GR + AV L KM+ + DV TW
Sbjct: 295 ---------------------VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
S+ ISG+ Q+G Y AL + R+ML SG++PN +T+ EIH +K
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 386 MSL-------VDDVLTGNSLIDMYSKCGDLEAAQRIFDMM--YERDVYSWNTIIGGYCHA 436
+ D+ + N LIDMY+KC ++ A+ +FD + ERDV +W +IGGY
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 437 GFCGKAYELFMKM--QDSDSPPNVVTWNALITGYMQSGA--------------EDQALDL 480
G KA EL +M +D + PN T + + A + A+ L
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 481 F-----------------KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
F R+ D + +N +W SL+ G+ G ++A+ IF M+
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 524 QIAPNSVTVLSILPA 538
+ VT+L +L A
Sbjct: 574 GFKLDGVTLLVVLYA 588
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 151/295 (51%), Gaps = 16/295 (5%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---------RIGLVGNVN 119
+A+ + + G K +T +++L C + G+E+H R G+ N
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEM--RERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
V +L+ MY+KC + AR +FD + +ER++ TW+ MIG S+ + ++L +M
Sbjct: 408 -MVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 178 VRHG--FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMAVYAKC 234
P+ F + L AC L G+ IH+ A+R+ + + V+N ++ +YAKC
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
G + A+ +F +M ++ VTW +++TG+ +G E+A FD M+ G + VT +++
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 295 ASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+ + G D ++ +M++ FG++P ++ ++ + GR AL L+ +M
Sbjct: 587 YACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 165/424 (38%), Gaps = 88/424 (20%)
Query: 79 EQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHL 136
E G + IT +N+L C +G++LH + + N FV LV MY+KCG +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHC-FAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF---------------------- 174
EA VF M +++ +W+AM+ S+ +E+ V LF
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 175 -------------YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH------ 215
M+ G P+E L +L C G L G+ IH AI++
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 216 -GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD--ERDSVTWNAIITGFCQNGDIEQAR 272
G V N ++ +YAKC ++ A+ +F S+ ERD VTW +I G+ Q+GD +A
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 273 KYFDAMQEEGVE--PGLVTWNILIASYNQLGRCDIA-----------------------V 307
+ M EE + P T + + + L I +
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 308 DLMRKMESFG---------LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
D+ K S + + TW+S+++G+ G AL + +M G + + +
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS----LIDMYSKCGDLEAAQRI 414
T+ E +M V V G L+D+ + G L AA R+
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 415 FDMM 418
+ M
Sbjct: 638 IEEM 641
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVNP 120
+G + A+ +L + E+ + RP T L +C + +G+++HA + N P
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 121 -FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
FV L+ MY+KCG +S+AR VFD M +N TW++++ EE + +F +M R
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 180 HGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
GF D L +L AC G ++ G + + G+ ++ + + G +
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 239 FAKKLFKSMD-ERDSVTWNAIITGFCQNGDIE 269
A +L + M E V W A ++ +G +E
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/586 (25%), Positives = 263/586 (44%), Gaps = 84/586 (14%)
Query: 92 LLQSCIDRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFD--EMR 147
LLQ+C + + + G+++HA + +V ++ + + + +++ MY+ CG S+ K+F ++R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFL-IVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
++ W+++I + R + + ++ M+ G PD P +++AC + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
+ GM + V +S++ Y + G++ KLF + ++D V WN ++ G+ + G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 268 IEQARKYFDAMQEEGVEPGLVTW-----------------------------------NI 292
++ K F M+ + + P VT+ N
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
L++ Y++ GR D A L R M D TW+ MISG+ Q G +L +M+ SG
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
V P++IT +IH ++ S+ D+ ++LID Y KC + AQ
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW----------- 461
IF DV + +I GY H G + E+F + PN +T
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 462 ------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A+I Y + G + A ++F+R+ KR++ SW
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-----KRDIVSW 510
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
NS+I QS A+ IFR+M I + V++ + L A ANL + K IH ++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+L S++ + LID YAK GNL + +F + K+I+SWN +++
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 246/540 (45%), Gaps = 48/540 (8%)
Query: 27 EFIASTRVHANSNYVSMSIRSLPYPKFM-------DAQLNQLCSNGPLSDAVAILDSLAE 79
EF+AS+ + A Y + + S + + + + LN G L + +
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
+T+ +L C + I++G +LH + + G + ++ L+SMYSKCG +
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
A K+F M + TW+ MI + EE + FY+M+ G LPD +L + K
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
+LE + IH +RH + I + ++++ Y KC + A+ +F + D V + A+
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-------NILIA---------------- 295
I+G+ NG + + F + + + P +T IL+A
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 296 ------------SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
Y + GR ++A ++ ++ D+ +W+SMI+ Q A+D
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK----RDIVSWNSMITRCAQSDNPSAAID 528
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ R+M +SG+ + +++ IHG +K SL DV + ++LIDMY+
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 404 KCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWN 462
KCG+L+AA +F M E+++ SWN+II + G + LF +M + S P+ +T+
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+I+ G D+ + F+ + +D I+ + ++ F ++G+ +A + + M F
Sbjct: 649 EIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 212/488 (43%), Gaps = 81/488 (16%)
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
L +LQAC L G+ +H+ I + + + I+ +YA CG K+F +D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 249 ERDSVT--WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW---------------- 290
R S WN+II+ F +NG + QA ++ M GV P + T+
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 291 -------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ LI +Y + G+ D+ L ++ L D W+ M++G
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV----LQKDCVIWNVMLNG 213
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ + G + M + + PN++T ++HG+ V + +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
NSL+ MYSKCG + A ++F MM D +WN +I GY +G ++ F +M
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 452 SDSPPNVVTWN-----------------------------------ALITGYMQSGAEDQ 476
S P+ +T++ ALI Y +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
A ++F + +V + ++I+G+L +G ++++FR + +I+PN +T++SIL
Sbjct: 394 AQNIFSQCNS-----VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 537 PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDII 596
P L+A K +E+H +++ + ++ +ID YAK G + + IF+ L +DI+
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Query: 597 SWNIMLSQ 604
SWN M+++
Sbjct: 509 SWNSMITR 516
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 240/551 (43%), Gaps = 77/551 (13%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG- 116
++ NG L+ A+A + G T+ L+++C+ + L + +G
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
+ N FV + L+ Y + G + K+FD + +++ W+ M+ ++ + + V+ F
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M P+ +L C ++ G +H + + G+ + NS++++Y+KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
A KLF+ M D+VTWN +I+G+ Q+G +E++ +F M GV P +T++ L+ S
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 297 ---YNQLGRC-DIAVDLMRKMESFGL---------------------------TPDVYTW 325
+ L C I +MR S + + DV +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MISG+ G +L++ R ++ + PN IT+ E+HG +K
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH---------- 435
+ G ++IDMY+KCG + A IF+ + +RD+ SWN++I
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 436 ------AGFC---------------------GKAYELFMKMQDSDSPPNVVTWNALITGY 468
+G C GKA FM S +V + + LI Y
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS--DVYSESTLIDMY 587
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAP 527
+ G A+++FK ++ ++N+ SWNS+IA G+ ++ +F M + I P
Sbjct: 588 AKCGNLKAAMNVFKTMK-----EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 528 NSVTVLSILPA 538
+ +T L I+ +
Sbjct: 643 DQITFLEIISS 653
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 239/484 (49%), Gaps = 45/484 (9%)
Query: 77 LAEQGS-KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVN-PFVETKLVSMYSKCG 134
LA+ S K+ ++ L +C + GR++H + +G N P+V T L+SMYSKCG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 135 HLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ 194
+ EA VF + ++ L W+AM+ A + +DLF M + LPD F L ++
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 195 ACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVT 254
C G G+ +H+ + + S+ + ++++ +Y+KCG A +FKSM+E+D V
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEG-------------------------------- 282
W ++I+G C+NG ++A K F M+++
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 283 -VEPGLVTWNILIAS-----YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
++ GLV N+ + S Y++ G ++A+ + M T ++ W+SMIS +++
Sbjct: 502 MIKTGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMS----TENMVAWNSMISCYSRNN 556
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
++DL ML G+ P+S+++ +HG +++ + D N
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
+LIDMY KCG + A+ IF M + + +WN +I GY G C A LF +M+ + P
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ VT+ +LI+ SG ++ ++F+ +++D I+ N+ + +++ ++G ++A
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 517 FRRM 520
+ M
Sbjct: 737 IKAM 740
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/595 (24%), Positives = 261/595 (43%), Gaps = 84/595 (14%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDE 145
T+ +LL++C + G+ +H + ++G +PF+ T LV+MY KCG L A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 146 MRE-------RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
+ R++ W++MI + + ++E V F M+ G PD F L ++ K
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 199 CGDL--ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVT-W 255
G+ E G+ IH +R+ + + + +++ +Y K G A ++F ++++ +V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ-----LGR---CDIA- 306
N +I GF +G E + + + V+ ++ + + +Q GR CD+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 307 ----------VDLMRKMESFGLTPDVYT------------WSSMISGFTQKGRTYHALDL 344
L+ G+ + T W++M++ + + Y ALDL
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
M V P+S T+ +H K + ++L+ +YSK
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP--------- 455
CG A +F M E+D+ +W ++I G C G +A ++F M+D D
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 456 ----------------------------PNVVTWNALITGYMQSGAEDQALDLFKRIEKD 487
NV ++LI Y + G + AL +F + +
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 488 GKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKK 547
N+ +WNS+I+ + ++ + ++ +F M I P+SV++ S+L A ++ + K
Sbjct: 541 -----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 548 VKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
K +H LR + S+ + N LID Y K G Y+ IF + K +I+WN+M+
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 8/297 (2%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPIT--YMNLLQSCIDRDCIEVGRELHA---RI 112
++ LC NG +A+ + + + ++P + ++ +C + + G ++H +
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
GLV NV FV + L+ +YSKCG A KVF M N+ W++MI SR E +D
Sbjct: 506 GLVLNV--FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
LF M+ G PD + +L A L G+ +H +R G+ S + N+++ +Y
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV 623
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
KCG +A+ +FK M + +TWN +I G+ +GD A FD M++ G P VT+
Sbjct: 624 KCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLS 683
Query: 293 LIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
LI++ N G + ++ M + +G+ P++ +++M+ + G A ++ M
Sbjct: 684 LISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 211/500 (42%), Gaps = 83/500 (16%)
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F F P +L+AC +L G+ IH + G + S++ +Y KCG + +A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV 115
Query: 242 KLF-------KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
++F + RD WN++I G+ + ++ F M GV P + +I++
Sbjct: 116 QVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 295 ASYNQLG---------------RCDIAVDLMRKME------SFGLTPD------------ 321
+ + G R + D K FGL+ D
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 322 -VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
V W+ MI GF G +LDL + V+ S + +IH
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
VKM L +D SL+ MYSKCG + A+ +F + ++ + WN ++ Y +
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 441 KAYELFMKMQ------DSDSPPNVVTW-----------------------------NALI 465
A +LF M+ DS + NV++ +AL+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF-- 523
T Y + G + A +FK +E+ +++ +W SLI+G ++G+ +A+++F M+
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEE-----KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+ P+S + S+ A A L A + ++H ++ LV + V + LID Y+K G +
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 584 RRIFDGLPLKDIISWNIMLS 603
++F + +++++WN M+S
Sbjct: 531 LKVFTSMSTENMVAWNSMIS 550
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 201/402 (50%), Gaps = 17/402 (4%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
+ +V Y K G + +AR +FD M ERN+ TW+AMI + +E+ LF M + G +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 184 P-DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
+ L + +AC G IH + R + + + NS+M++Y+K G MG AK
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG--LVTWNILIASYNQL 300
+F M +DSV+WN++ITG Q I +A + F+ M PG +V+W +I ++
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------PGKDMVSWTDMIKGFSGK 385
Query: 301 GRCDIAVDLMRKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
G V+L FG+ P D TW++MIS F G AL KML V PNS
Sbjct: 386 GEISKCVEL------FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
T +IHG VKM++V+D+ NSL+ MY KCG+ A +IF +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 419 YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQAL 478
E ++ S+NT+I GY + GF KA +LF ++ S PN VT+ AL++ + G D
Sbjct: 500 SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGW 559
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
FK ++ I+ + ++ +SG D A + M
Sbjct: 560 KYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 230/480 (47%), Gaps = 56/480 (11%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK-SWEEVVDLFYDMVRHGFLP 184
++S Y++ G +S+A +VFDEM R +++AMI A + K + +LF D+ +
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
++ ++A G+ + E V R + S N +++ Y + G+ A ++F
Sbjct: 147 YATMITGFVRA-GRFDEAEFLYAETPVKFRDSVAS-----NVLLSGYLRAGKWNEAVRVF 200
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD 304
+ M ++ V+ ++++ G+C+ G I AR FD M E
Sbjct: 201 QGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----------------------- 237
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXX 363
+V TW++MI G+ + G L +M G V+ NS T+
Sbjct: 238 ----------------NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
+IHG+ +M L D+ GNSL+ MYSK G + A+ +F +M +D
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
SWN++I G +AYELF KM D +V+W +I G+ G + ++LF
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKD----MVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
+ + I +W ++I+ F+ +G ++A+ F +M ++ PNS T S+L A A+L
Sbjct: 398 MPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ +IH ++ N+V+++SV N L+ Y K GN + +IF + +I+S+N M+S
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 9/303 (2%)
Query: 48 LPYPKFMDAQLNQLCSN-GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGR 106
L + F+ L + S G + +A A+ + + S +++ +L+ + R I
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS----VSWNSLITGLVQRKQISEAY 361
Query: 107 ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS 166
EL ++ V+ T ++ +S G +S+ ++F M E++ TW+AMI A
Sbjct: 362 ELFEKMPGKDMVS---WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS 226
+EE + F+ M++ P+ + +L A DL G IH ++ + + + V NS
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
++++Y KCG A K+F + E + V++N +I+G+ NG ++A K F ++ G EP
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKME-SFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
VT+ L+++ +G D+ + M+ S+ + P ++ M+ + G A +L+
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Query: 346 RKM 348
M
Sbjct: 599 STM 601
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 20/210 (9%)
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
NS I +++ G+L+ A+ IF M R + SW +I Y G KA+++F +M P
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM-----P 108
Query: 456 PNVVT-WNALITGYMQSGAE-DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
V T +NA+IT +++ + +A +LF I ++N S+ ++I GF+++G+ D+A
Sbjct: 109 VRVTTSYNAMITAMIKNKCDLGKAYELFCDIP-----EKNAVSYATMITGFVRAGRFDEA 163
Query: 514 MQIFRRMQF-FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
++ F+ + S +LS L AGK + + + V E+ + ++
Sbjct: 164 EFLYAETPVKFRDSVASNVLLS-----GYLRAGKWNEAVR--VFQGMAVKEVVSCSSMVH 216
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
Y K G ++ +R +FD + +++I+W M+
Sbjct: 217 GYCKMGRIVDARSLFDRMTERNVITWTAMI 246
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 254/566 (44%), Gaps = 51/566 (9%)
Query: 32 TRVHANSNYVSMS---IRSLPYPKF----MDAQLNQLCSNGPLSDAVAILDSLAEQGSKV 84
TR++A+ N V ++ +P+P+ D + SN A+ + + G +
Sbjct: 42 TRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRP 101
Query: 85 RPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVF 143
TY +L++C I+ G+ +H+ + + +V T LV Y+KCG L A KVF
Sbjct: 102 TKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVF 161
Query: 144 DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEFLLPKILQACGKCGDL 202
DEM +R++ W+AMI S +V+ LF DM R G P+ + + A G+ G L
Sbjct: 162 DEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 203 ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
G+ +H R G + + V I+ VYAK + +A+++F +++ VTW+A+I G+
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY 281
Query: 263 CQNGDIEQARKYFDAMQ-------------------------------------EEGVEP 285
+N I++A + F M + G
Sbjct: 282 VENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL 341
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
L N +I+ Y + G D R+ GL DV +++S+I+G R + L
Sbjct: 342 DLTVQNTIISFYAKYGS---LCDAFRQFSEIGL-KDVISYNSLITGCVVNCRPEESFRLF 397
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+M SG+ P+ T+ HG V + N+L+DMY+KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 406 GDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
G L+ A+R+FD M++RD+ SWNT++ G+ G +A LF MQ++ P+ VT A++
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 466 TGYMQSGAEDQALDLFKRIEK-DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ SG D+ LF + + D + + +N + ++G D+A +M F
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKE 550
T+LS + N G +V +
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSK 603
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 259/597 (43%), Gaps = 93/597 (15%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSM---YSKCGHLSEARKVFDE 145
+++LL++CI + +G+ +H + L ++ T LV++ Y+ C + AR VFDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHL-LKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 146 MRER--NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLE 203
+ N W MI A + E+ +DL+Y M+ G P ++ P +L+AC ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
G+LIHS + + V +++ YAKCGE+ A K+F M +RD V WNA+I+GF
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 264 QNGDIEQARKYF-DAMQEEGVEPGLVTWNILIASYNQLGRC------------------- 303
+ + F D + +G+ P L T ++ + LGR
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLST---IVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 304 -DIAVD--------------LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
D+ V R++ + TWS+MI G+ + A ++ +M
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Query: 349 LLSG----VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
L++ V P +I + +H VK + D+ N++I Y+K
Sbjct: 298 LVNDNVAMVTPVAIGLILMGCARFGDLSGGRC--VHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW--- 461
G L A R F + +DV S+N++I G +++ LF +M+ S P++ T
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 462 --------------------------------NALITGYMQSGAEDQALDLFKRIEKDGK 489
NAL+ Y + G D A +F D
Sbjct: 416 LTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF-----DTM 470
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
KR++ SWN+++ GF G +A+ +F MQ + P+ VT+L+IL A ++ + K
Sbjct: 471 HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 550 EIHCCALRR--NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
++ R N++ I N + D A++G L + + +P + DI +LS
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 269/618 (43%), Gaps = 81/618 (13%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRD-CIEVGRELHARIGLVG 116
+ +L S + + + + + T+ +L++C +V ++HARI G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 117 -NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
+ V L+ +YS+ G + AR+VFD +R ++ +W AMI S+ + E + LF
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
DM G +P + +L AC K LE G +H + ++ G S V N+++++Y G
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI- 294
+ A+ +F +M +RD+VT+N +I G Q G E+A + F M +G+EP T L+
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 295 -----------------------ASYNQL--------GRC---DIAVDLMRKMESFGLTP 320
AS N++ +C + A+D + E
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE----VE 453
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+V W+ M+ + ++ + R+M + + PN T +IH
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+K + + + LIDMY+K G L+ A I +DV SW T+I GY F
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 441 KAYELFMKMQD-----------------------------------SDSPPNVVTWNALI 465
KA F +M D S ++ NAL+
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
T Y + G +++ F++ E I +WN+L++GF QSG ++A+++F RM I
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNI-----AWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
N+ T S + A + K+ K++H + SE V N LI YAK G++ + +
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 586 IFDGLPLKDIISWNIMLS 603
F + K+ +SWN +++
Sbjct: 749 QFLEVSTKNEVSWNAIIN 766
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 261/599 (43%), Gaps = 74/599 (12%)
Query: 74 LDSLAEQGSKVRPITYMNLLQSCIDRD-CIEVGRELHARIGLVG-NVNPFVETKLVSMYS 131
+DS+ +G + T LL+ C+ + ++ GR+LH++I +G + N + KL Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 132 KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
G L A KVFDEM ER +FTW+ MI + EV LF MV P+E
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 192 ILQAC-GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
+L+AC G + IH+ + G+ S V N ++ +Y++ G + A+++F + +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
D +W A+I+G +N +A + F M G+ P ++ ++++ ++ +I L
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 311 RKMESFGLTPDVY-------------------------------TWSSMISGFTQKGRTY 339
+ G + D Y T++++I+G +Q G
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
A++L ++M L G+EP+S T+ ++H K+ + +L+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
++Y+KC D+E A F +V WN ++ Y ++ +F +MQ + PN
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 460 TW-----------------------------------NALITGYMQSGAEDQALDLFKRI 484
T+ + LI Y + G D A D+ R
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 485 EKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVA 544
++V SW ++IAG+ Q DKA+ FR+M I + V + + + A A L A
Sbjct: 552 A-----GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 545 GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K+ ++IH A S++ N L+ Y++ G + S F+ D I+WN ++S
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/621 (21%), Positives = 261/621 (42%), Gaps = 82/621 (13%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ L N ++A+ + + G P + ++L +C + +E+G +LH + +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 116 G-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
G + + +V LVS+Y G+L A +F M +R+ T++ +I S+ E+ ++LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M G PD L ++ AC G L G+ +H+ + G S+ ++ +++ +YAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW---- 290
++ A F + + V WN ++ + D+ + + F MQ E + P T+
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 291 -------------------------------NILIASYNQLGRCDIAVDLMRKMESFGLT 319
++LI Y +LG+ D A D++ +
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG---- 553
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
DV +W++MI+G+TQ AL R+ML G+ + + + +I
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H D+ N+L+ +YS+CG +E + F+ D +WN ++ G+ +G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 440 GKAYELFMKMQDSDSPPNVVTW-----------------------------------NAL 464
+A +F++M N T+ NAL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I+ Y + G+ A F + +N SWN++I + + G +A+ F +M
Sbjct: 734 ISMYAKCGSISDAEKQFLEVS-----TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 525 IAPNSVTVLSILPAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+ PN VT++ +L A +++ + K + L + ++D ++G L +
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 584 RRIFDGLPLK-DIISWNIMLS 603
+ +P+K D + W +LS
Sbjct: 849 KEFIQEMPIKPDALVWRTLLS 869
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 217/517 (41%), Gaps = 43/517 (8%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N L G A+ + + G + T +L+ +C + G++LHA +G
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF 420
Query: 118 V-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
N +E L+++Y+KC + A F E N+ W+ M+ A +F
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M +P+++ P IL+ C + GDLE G IHS I+ + V + ++ +YAK G+
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV---EPGLVT---- 289
+ A + +D V+W +I G+ Q ++A F M + G+ E GL
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 290 ----------------------------WNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
N L+ Y++ G+ + + + E+ D
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA----GD 656
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
W++++SGF Q G AL + +M G++ N+ T ++H
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ K + N+LI MY+KCG + A++ F + ++ SWN II Y GF +
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A + F +M S+ PN VT +++ G D+ + F+ + + + + ++
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++G +A + + M I P+++ ++L A
Sbjct: 837 DMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSA 870
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 159/648 (24%), Positives = 293/648 (45%), Gaps = 83/648 (12%)
Query: 29 IASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGS-KVRPI 87
++++++ A S+ VS ++ + M+ +N LC + +A+ D + S K+R
Sbjct: 13 VSNSQILATSSVVS----TIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLR 68
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDE 145
TY++L+ +C + GR++H I L N + + ++SMY KCG L +AR+VFD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHI-LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 146 MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
M ERNL +++++I S+ E + L+ M++ +PD+F I++AC D+ G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+ +H+ I+ S + N+++A+Y + +M A ++F + +D ++W++II GF Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 266 GDIEQARKYFDAMQEEGV-EPGLVTWNILIASYNQLGR---------------------- 302
G +A + M GV P + + + + L R
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 303 ----CDIA-----VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
CD+ ++ R++ PD +W+ +I+G G A+ + +M SG
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
P++I++ +IH +K + D+ NSL+ MY+ C DL
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 414 IF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW----------- 461
+F D D SWNTI+ + LF M S+ P+ +T
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 462 ------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
N LI Y + G+ QA +F D R+V SW
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF-----DSMDNRDVVSW 542
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
++LI G+ QSG ++A+ +F+ M+ I PN VT + +L A +++ ++ +++
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 558 RNLVSEISVS-NILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
+ +S + ++D A++G L + R D + L+ D++ W +LS
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS 650
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 242/524 (46%), Gaps = 40/524 (7%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHAR-IGLVGNVNPFV 122
NG ++A+ + + ++ + +++++C + +G++LHA+ I L + +
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG- 181
+ L++MY + +S+A +VF + ++L +WS++I S+ E + +M+ G
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F P+E++ L+AC + G IH + I+ + + S+ +YA+CG + A+
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ-- 299
++F ++ D+ +WN II G NG ++A F M+ G P ++ L+ + +
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 300 --------------------LGRCDIAVDL----------MRKMESFGLTPDVYTWSSMI 329
L C+ + + E F D +W++++
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTIL 445
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
+ Q + L L + ML+S EP+ IT+ ++H +K L
Sbjct: 446 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
+ N LIDMY+KCG L A+RIFD M RDV SW+T+I GY +GF +A LF +M
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
+ + PN VT+ ++T G ++ L L+ ++ + I + ++ ++G+
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 510 KDKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKE 550
++A + M ++ P+ V T+LS N+ +K E
Sbjct: 626 LNEAERFIDEM---KLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 174/416 (41%), Gaps = 41/416 (9%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
N L MY++CG L+ AR+VFD++ + +W+ +I + +E V +F M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
GF+PD L +L A K L G IHS I+ G + + V NS++ +Y C ++
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 239 FAKKLFKSM-DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
LF+ + DSV+WN I+T Q+ + + F M EP +T L+
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 298 NQLGRCDIA----------------------VDLMRKMESFGLT---------PDVYTWS 326
++ + +D+ K S G DV +WS
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG-IGVK 385
++I G+ Q G AL L ++M +G+EPN +T +++ + +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD-MMYERDVYSWNTIIGGYCHAG---FCGK 441
+ + ++D+ ++ G L A+R D M E DV W T++ G K
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A E +K+ +S +V+ L + + SG + A L ++K K SW
Sbjct: 664 AAENILKIDPFNSTAHVL----LCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 248/561 (44%), Gaps = 80/561 (14%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
L K+ ++ +N L S+G ++ S+ T+ +LL++C + G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 108 LHARIGLVGNVNPF-VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS 166
+H ++ + G + F + + LV++Y+K G L+ ARKVF+EMRER++ W+AMIG SR
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL--IHSVAIRHGMCSSIRVN 224
E L +M G P L ++L G LE +L +H A+ +G I V
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVM 182
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
NS++ +Y KC +G AK LF M++RD V+WN +I+G+ G++ + K M+ +G+
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 285 PGLVTWNILIASYN-----QLGR---CDIA-----VDLMRKMESFGL------------- 318
P T+ ++ ++GR C I VD+ K +
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 319 -----TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
DV W+ MISG + GR AL + +ML SG + +S +
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
+HG ++ D NSLI MY+KCG L+ + IF+ M ERD+ SWN II GY
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 434 CHAGFCGKAYELFMKM-----QDSDS-------------------------------PPN 457
KA LF +M Q DS P
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPC 482
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+ AL+ Y + G + A F I ++V SW LIAG+ G+ D A++I+
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSIS-----WKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 518 RRMQFFQIAPNSVTVLSILPA 538
+ PN V L++L +
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSS 558
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 239/514 (46%), Gaps = 69/514 (13%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
+++ I S ++V+ F M+ + LPD F P +L+AC L G IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARK 273
+G S +++S++ +YAK G + A+K+F+ M ERD V W A+I + + G + +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 274 YFDAMQEEGVEPGLVTWNILIASYNQLGR--------------CDIAV-----DLMRKME 314
+ M+ +G++PG VT +++ ++ + CDIAV +L K +
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 315 SFGLTPDVY---------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
G D++ +W++MISG+ G L LL +M G+ P+ T
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
+H VK D+ +LI MY KCG EA+ R+ + + +DV
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC 313
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSP------PNVV-------------------- 459
W +I G G KA +F +M S S +VV
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 460 ---------TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
N+LIT Y + G D++L +F+R+ +R++ SWN++I+G+ Q+
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-----ERDLVSWNAIISGYAQNVDL 428
Query: 511 DKAMQIFRRMQFFQIAP-NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNI 569
KA+ +F M+F + +S TV+S+L A ++ A K IHC +R + V
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA 488
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L+D Y+K G L ++R FD + KD++SW I+++
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIA 522
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 236/524 (45%), Gaps = 44/524 (8%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET 124
G + +A ++++ + QG K P+T + +L ++ ++ + G + + V
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGF--DCDIAVMN 183
Query: 125 KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLP 184
++++Y KC H+ +A+ +FD+M +R++ +W+ MI + + E++ L Y M G P
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
D+ L G DLE GR++H ++ G + + +++ +Y KCG+ + ++
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD 304
+++ +D V W +I+G + G E+A F M + G + ++AS QLG D
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 305 IAVDLMRKMESFGLT-------------------------------PDVYTWSSMISGFT 333
+ + + G T D+ +W+++ISG+
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 334 QKGRTYHALDLLRKMLLSGVEP-NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
Q AL L +M V+ +S TV IH I ++ +
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK---AYELFMKM 449
L +L+DMYSKCG LEAAQR FD + +DV SW +I GY GF GK A E++ +
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGY---GFHGKGDIALEIYSEF 540
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
S PN V + A+++ +G Q L +F + +D ++ N ++ ++ +
Sbjct: 541 LHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKR 600
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
+ A + ++ S+ VL I+ +V++I C
Sbjct: 601 IEDAFKFYKE----NFTRPSIDVLGIILDACRANGKTEVEDIIC 640
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 8/241 (3%)
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEAR 140
+V T ++LLQ+C + VG+ +H I + + P V+T LV MYSKCG+L A+
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHC-IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 141 KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
+ FD + +++ +W +I + ++++ + + G P+ + +L +C G
Sbjct: 504 RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
Query: 201 DLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
++ G I S +R G+ + ++ + + + A K +K R S+ II
Sbjct: 564 MVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
Query: 260 TGFCQ-NGDIEQARKYFDAMQEEGVEPGLVTWNILIA-SYNQLGRCDIAVDLMRKMESFG 317
C+ NG E + M E ++PG + + S+ + R D + +M S G
Sbjct: 624 LDACRANGKTEVEDIICEDMIE--LKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLG 681
Query: 318 L 318
L
Sbjct: 682 L 682
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/593 (25%), Positives = 273/593 (46%), Gaps = 88/593 (14%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
+ LLQ D + +H +I + G ++ ++ L+++YS+ G + ARKVF++M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEFLLPKILQACGKCGDLETGR 206
ERNL +WS M+ AC+ +EE + +F + R P+E++L +QAC G GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 207 L----IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
+ S ++ G + V ++ Y K G + +A+ +F ++ E+ +VTW +I+G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 263 CQNGDIEQARKYFDAMQEEGVEP-------------------------------GL---- 287
+ G + + F + E+ V P GL
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
N+LI SY + GR A L M + ++ +W++++SG+ Q A++L
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPN----KNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
M G++P+ ++H +K +L +D NSLIDMY+KC
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE---LFMKMQDSDSPPNVVTWNAL 464
L A+++FD+ DV +N +I GY G + +E +F M+ P+++T+ +L
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 465 ITGYMQSGAEDQALDLFKRIE----------------------------KDGKI------ 490
+++ A +L L K+I KD ++
Sbjct: 461 ----LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+++ WNS+ AG++Q + ++A+ +F +Q + P+ T +++ A NL + + +E
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
HC L+R L ++N L+D YAK G+ + + FD +D++ WN ++S
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 250/557 (44%), Gaps = 83/557 (14%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V T L+ Y K G++ AR VFD + E++ TW+ MI C + + LFY ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
+PD ++L +L AC LE G+ IH+ +R+G+ + N ++ Y KCG + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI---ASY 297
KLF M ++ ++W +++G+ QN ++A + F +M + G++P + + ++ AS
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 298 NQLG-----------------------------RCDIAVDLMRKMESFGLTPDVYTWSSM 328
+ LG +CD D + + F DV +++M
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAM 422
Query: 329 ISGFTQKG---RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
I G+++ G + AL++ R M + P+ +T +IHG+ K
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
L D+ G++LID+YS C L+ ++ +FD M +D+ WN++ GY +A L
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 446 FMKMQDSDSPPNVVTW-----------------------------------NALITGYMQ 470
F+++Q S P+ T+ NAL+ Y +
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAK 602
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
G+ + A F D R+V WNS+I+ + G+ KA+Q+ +M I PN +
Sbjct: 603 CGSPEDAHKAF-----DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 531 TVLSILPA--FANLVA-GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
T + +L A A LV G K E+ LR + E ++ ++G L +R +
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFEL---MLRFGIEPETEHYVCMVSLLGRAGRLNKARELI 714
Query: 588 DGLPLKD-IISWNIMLS 603
+ +P K I W +LS
Sbjct: 715 EKMPTKPAAIVWRSLLS 731
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 130/553 (23%), Positives = 248/553 (44%), Gaps = 48/553 (8%)
Query: 84 VRPITYM--NLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEAR 140
V P Y+ +L +C +E G+++HA I G ++ + L+ Y KCG + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 141 KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
K+F+ M +N+ +W+ ++ + +E ++LF M + G PD + IL +C
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
L G +H+ I+ + + V NS++ +YAKC + A+K+F D V +NA+I
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 261 GFCQNG---DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG 317
G+ + G ++ +A F M+ + P L+T+ L+ + L ++ + M +G
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 318 LTPDVYT-------------------------------WSSMISGFTQKGRTYHALDLLR 346
L D++ W+SM +G+ Q+ AL+L
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
++ LS P+ T E H +K L + N+L+DMY+KCG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
E A + FD RDV WN++I Y + G KA ++ KM PN +T+ +++
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
+G + L F+ + + G I+ + +++ ++G+ +KA ++ +M
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFG-IEPETEHYVCMVSLLGRAGRLNKARELIEKM---PTK 720
Query: 527 PNSVTVLSILPAFA---NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
P ++ S+L A N+ + E+ + ++ S +SNI YA G +
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI----YASKGMWTEA 776
Query: 584 RRIFDGLPLKDII 596
+++ + + ++ ++
Sbjct: 777 KKVRERMKVEGVV 789
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 211/496 (42%), Gaps = 45/496 (9%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI--GLVGNVNPF 121
N +A+ + S+++ G K ++L SC + G ++HA +GN + +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN-DSY 386
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS-WE--EVVDLFYDMV 178
V L+ MY+KC L++ARKVFD ++ ++AMI SR + WE E +++F DM
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
P +L+A L + IH + ++G+ I ++++ VY+ C +
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-NILIASY 297
++ +F M +D V WN++ G+ Q + E+A F +Q P T+ N++ A+
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 298 N----QLG---------------------------RCDIAVDLMRKMESFGLTPDVYTWS 326
N QLG +C D + +S + DV W+
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRDVVCWN 625
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
S+IS + G AL +L KM+ G+EPN IT + + ++
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF 685
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD-VYSWNTIIGGYCHAGFCGKAYEL 445
+ + ++ + + G L A+ + + M + W +++ G AG A E
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA-EH 744
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW---NSLIA 502
+M P + ++ L Y G +A + +R++ +G +K SW N +
Sbjct: 745 AAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Query: 503 GFLQSGQKD-KAMQIF 517
FL + KA QI+
Sbjct: 805 IFLSKDKSHCKANQIY 820
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 228/522 (43%), Gaps = 77/522 (14%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
Y +LL I + LH + G V+ + + L Y+ CGH++ ARK+F+EM +
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF--LPDEFLLPKILQACGKCGDLETGR 206
+L +++ +I RE + + + +F MV G +PD + P + +A G+ ++ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
++H +R V N+++A+Y G++ A+ +F M RD ++WN +I+G+ +NG
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 267 DIEQARKYFDAMQEEGVEPGLVTW-----------------------------------N 291
+ A FD M E V+ T N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
L+ Y + GR D A + +ME DV TW+ MI+G+T+ G +AL+L R M
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMER----RDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
GV PN++T+ +HG V+ + D++ SLI MY+KC ++
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 412 QRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI------ 465
R+F + W+ II G A LF +M+ D PN+ T N+L+
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 466 ---------------TGYMQS--------------GAEDQALDLFKRIEKDGKIKRNVAS 496
TG+M S G + A +F I++ K K +V
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK-DVVL 492
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
W +LI+G+ G A+Q+F M + PN +T S L A
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 227/517 (43%), Gaps = 51/517 (9%)
Query: 65 GPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARI--GLVGNVNP 120
G DA+++ + +G K P TY + ++ + +++G +H RI G +
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR-DK 152
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V+ L++MY G + AR VFD M+ R++ +W+ MI R + + +F MV
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
D + +L CG DLE GR +H + + I V N+++ +Y KCG M A
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT----------- 289
+ +F M+ RD +TW +I G+ ++GD+E A + MQ EGV P VT
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 290 -----------WNI-------------LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
W + LI+ Y + R D+ + + P W
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----W 388
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
S++I+G Q AL L ++M VEPN T+ IH K
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGK 441
+ + L+ +YSKCG LE+A +IF+ + E +DV W +I GY G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A ++FM+M S PN +T+ + + SG ++ L LF+ + + K + ++
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++G+ D+A + + F P S ++L A
Sbjct: 569 DLLGRAGRLDEAYNLITTIPF---EPTSTVWGALLAA 602
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 206/470 (43%), Gaps = 78/470 (16%)
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+ +H I G S + +++ YA CG + +A+KLF+ M + +++N +I + +
Sbjct: 35 KALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 266 GDIEQARKYFDAMQEEGVE----------------------PGLV-------TW------ 290
G A F M EGV+ GLV +W
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY 153
Query: 291 --NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
N L+A Y G+ ++A D+ M++ DV +W++MISG+ + G AL + M
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKN----RDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+ V+ + T+ +H + + L D + N+L++MY KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI--- 465
+ A+ +FD M RDV +W +I GY G A EL MQ PN VT +L+
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 466 ----------------------------TGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
T + A+ + +DL R+ G K + W
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV-FSGASKYHTGPW 388
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
+++IAG +Q+ A+ +F+RM+ + PN T+ S+LPA+A L ++ IHC +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL----PLKDIISWNIMLS 603
+S + + L+ Y+K G L + +IF+G+ KD++ W ++S
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI--GLVGNVNPF 121
NG ++DA+ + D + + + T +++L C +E+GR +H + +G+
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD-KIE 254
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V+ LV+MY KCG + EAR VFD M R++ TW+ MI + + E ++L M G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P+ + ++ CG + G+ +H A+R + S I + S++++YAKC +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
++F + + W+AII G QN + A F M+ E VEP + T N L+ +Y L
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 302 RCDIAVDLMRKMESFGL-----------------------------------TPDVYTWS 326
A+++ + G + DV W
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
++ISG+ G ++AL + +M+ SGV PN IT
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 13/308 (4%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGL 114
+N +G + +A+ + + +G + +T +L+ C D + G+ LH R +
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
++ +ET L+SMY+KC + +VF + + WSA+I C + + + + LF
Sbjct: 351 YSDI--IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M R P+ L +L A DL IH + G SS+ ++ VY+KC
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 235 GEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G + A K+F + E +D V W A+I+G+ +GD A + F M GV P +T+
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITF 528
Query: 291 NILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+ + + G + + L R M E + ++ ++ + GR A +L+ +
Sbjct: 529 TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588
Query: 350 LSGVEPNS 357
EP S
Sbjct: 589 F---EPTS 593
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 243/524 (46%), Gaps = 60/524 (11%)
Query: 106 RELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
+++HAR+ ++G + F+ TKL+ S G ++ AR+VFD++ +F W+A+I SR
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
+++ + ++ +M PD F P +L+AC L+ GR +H+ R G + + V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 225 NSIMAVYAKCGEMGFAKKLFKS--MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
N ++A+YAKC +G A+ +F+ + ER V+W AI++ + QNG+ +A + F M++
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 283 VEPG--------------------------------------LVTWNILIASYNQLGRCD 304
V+P L++ N + A Q+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
I D M+ +P++ W++MISG+ + G A+D+ +M+ V P++I++
Sbjct: 278 ILFDKMK-------SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY 424
++ + DDV ++LIDM++KCG +E A+ +FD +RDV
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRI 484
W+ +I GY G +A L+ M+ PN VT+ L+ SG + F R+
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 485 EKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVA 544
D KI + +I ++G D+A ++ + M + P VTV L L A
Sbjct: 451 -ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPG-VTVWGAL-----LSA 500
Query: 545 GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
KK + + + I SN Y + NL + R++D
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSN--TGHYVQLSNLYAAARLWD 542
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 45/375 (12%)
Query: 28 FIASTRVHANSNYVSMSIR-----SLPYPKFM--DAQLNQLCSNGPLSDAVAILDSLAEQ 80
F+ + +HA+S++ ++ LP P+ +A + N DA+ + ++ Q
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM--Q 111
Query: 81 GSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLS 137
++V P T+ +LL++C +++GR +HA++ +G + + FV+ L+++Y+KC L
Sbjct: 112 LARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLG 171
Query: 138 EARKVFD--EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
AR VF+ + ER + +W+A++ A ++ E +++F M + PD L +L A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
DL+ GR IH+ ++ G+ + S+ +YAKCG++ AK LF M + + W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-------------YNQLGR 302
NA+I+G+ +NG +A F M + V P ++ I++ Y +GR
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 303 CDIA---------VDLMRKMESF---------GLTPDVYTWSSMISGFTQKGRTYHALDL 344
D +D+ K S L DV WS+MI G+ GR A+ L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 345 LRKMLLSGVEPNSIT 359
R M GV PN +T
Sbjct: 412 YRAMERGGVHPNDVT 426
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 48 LPYPKFM----DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIE 103
LP P+ A ++ NG +A+ I + + K + +++L + ++
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 104 VGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS 162
GR +HA + +G + P + L +MY+KCG ++ A+ +FD+M+ NL W+AMI +
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ E +D+F++M+ PD + + AC + G LE R ++ R +
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
++++++ ++AKCG + A+ +F +RD V W+A+I G+ +G +A + AM+ G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
V P VT+ L+ + N G +M + P ++ +I + G A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 343 DLLRKM 348
++++ M
Sbjct: 480 EVIKCM 485
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 186/448 (41%), Gaps = 94/448 (20%)
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
G++ FA+++F + WNAII G+ +N + A + MQ V P T+ L+
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 295 A-----SYNQLGR------------CDIAVD-----LMRKMESFGLTPDVY--------- 323
S+ Q+GR D+ V L K G V+
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 324 --TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+W++++S + Q G AL++ +M V+P+ + + IH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
VKM L + SL MY+KCG + A+ +FD M ++ WN +I GY G+ +
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA----------------------LD 479
A ++F +M + D P+ ++ + I+ Q G+ +QA +D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 480 LFK--------RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
+F R+ D + R+V W+++I G+ G+ +A+ ++R M+ + PN VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 532 VLSILPA------------FANLVAGKKV---KEIHCCALRRNLVSEISVSNILIDSYAK 576
L +L A F N +A K+ ++ + C +ID +
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC---------------VIDLLGR 471
Query: 577 SGNLMYSRRIFDGLPLK-DIISWNIMLS 603
+G+L + + +P++ + W +LS
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLS 499
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/573 (24%), Positives = 258/573 (45%), Gaps = 85/573 (14%)
Query: 105 GRELH---ARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGAC 161
G ++H A+ GL+ +V +V T ++ +Y G +S +RKVF+EM +RN+ +W++++
Sbjct: 61 GVQVHGFVAKSGLLSDV--YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSI 221
S + EEV+D++ M G +E + ++ +CG D GR I ++ G+ S +
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ-- 279
V NS++++ G + +A +F M ERD+++WN+I + QNG IE++ + F M+
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 280 ---------------------------------EEGVEPGLVTWNILIASYNQLGRCDIA 306
+ G + + N L+ Y GR A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 307 VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXX 366
+ ++M T D+ +W+S+++ F GR+ AL LL M+ SG N +T
Sbjct: 299 NLVFKQMP----TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Query: 367 XXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSW 426
+HG+ V L + + GN+L+ MY K G++ ++R+ M RDV +W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------------------- 461
N +IGGY KA F M+ N +T
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474
Query: 462 -----------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
N+LIT Y + G + DLF +G RN+ +WN+++A G
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQDLF-----NGLDNRNIITWNAMLAANAHHGHG 529
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
++ +++ +M+ F ++ + + L A A L ++ +++H A++ + + N
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
D Y+K G + ++ + + SWNI++S
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 622
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 227/532 (42%), Gaps = 85/532 (15%)
Query: 146 MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDL-ET 204
M RN +W+ M+ R + E ++ F M G P F++ ++ ACG+ G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
G +H + G+ S + V+ +I+ +Y G + ++K+F+ M +R+ V+W +++ G+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 265 NGDIEQARKYFDAMQEEGV-----------------------------------EPGLVT 289
G+ E+ + M+ EGV E L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
N LI+ +G D A + +M D +W+S+ + + Q G + + M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSE----RDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
E NS TV IHG+ VKM V N+L+ MY+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 410 AAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW-------- 461
A +F M +D+ SWN+++ + + G A L M S N VT+
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 462 ---------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
NAL++ Y + G ++ + ++ +R+V
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-----RRDV 411
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG---KKVKEI 551
+WN+LI G+ + DKA+ F+ M+ ++ N +TV+S+L A L+ G ++ K +
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPL 469
Query: 552 HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
H + S+ V N LI YAK G+L S+ +F+GL ++II+WN ML+
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 521
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 223/532 (41%), Gaps = 93/532 (17%)
Query: 30 ASTRVHANSNYVSMSIRSL-PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPIT 88
A V AN + M + L + M + +N +G DA+ +L S+ G V +T
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVN----DGRSLDALGLLCSMISSGKSVNYVT 347
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
+ + L +C D E GR LH + + G N + LVSMY K G +SE+R+V +M
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGR 206
R++ W+A+IG + ++ ++ + F M G + + +L AC GD LE G+
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
+H+ + G S V NS++ +YAKCG++ ++ LF +D R+ +TWNA++ +G
Sbjct: 468 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 527
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
E+ K L+ KM SFG++ D +++S
Sbjct: 528 HGEEVLK-----------------------------------LVSKMRSFGVSLDQFSFS 552
Query: 327 SMIS-----GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+S ++G+ H L
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGL--------------------------------------- 573
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
VK+ D N+ DMYSKCG++ ++ R + SWN +I G+ +
Sbjct: 574 -AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 632
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
F +M + P VT+ +L+T G D+ L + I +D ++ + +I
Sbjct: 633 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 692
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKE 550
+SG+ +A +M + PN + S+L + NL G+K E
Sbjct: 693 DLLGRSGRLAEAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAE 741
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 224/550 (40%), Gaps = 72/550 (13%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
VE L+SM G++ A +FD+M ER+ +W+++ A ++ EE +F M R
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
+ + +L G + GR IH + ++ G S + V N+++ +YA G A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW----------- 290
+FK M +D ++WN+++ F +G A +M G VT+
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 291 ------------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
N L++ Y ++G + ++ +M DV W+
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP----RRDVVAWN 415
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVK 385
++I G+ + AL + M + GV N ITV + +H V
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
D NSLI MY+KCGDL ++Q +F+ + R++ +WN ++ H G + +L
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 446 FMKMQDSDSPPNVVTWN-----ALITGYMQSGAE-----------------DQALDLFKR 483
KM+ + +++ A ++ G + + A D++ +
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 484 IEKDGK--------IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
+ G+ + R++ SWN LI+ + G ++ F M I P VT +S+
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 536 LPAFAN-LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK- 593
L A ++ + K + A L I +ID +SG L + +P+K
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715
Query: 594 DIISWNIMLS 603
+ + W +L+
Sbjct: 716 NDLVWRSLLA 725
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/573 (24%), Positives = 258/573 (45%), Gaps = 85/573 (14%)
Query: 105 GRELH---ARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGAC 161
G ++H A+ GL+ +V +V T ++ +Y G +S +RKVF+EM +RN+ +W++++
Sbjct: 78 GVQVHGFVAKSGLLSDV--YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 135
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSI 221
S + EEV+D++ M G +E + ++ +CG D GR I ++ G+ S +
Sbjct: 136 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 195
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ-- 279
V NS++++ G + +A +F M ERD+++WN+I + QNG IE++ + F M+
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 280 ---------------------------------EEGVEPGLVTWNILIASYNQLGRCDIA 306
+ G + + N L+ Y GR A
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 307 VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXX 366
+ ++M T D+ +W+S+++ F GR+ AL LL M+ SG N +T
Sbjct: 316 NLVFKQMP----TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 367 XXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSW 426
+HG+ V L + + GN+L+ MY K G++ ++R+ M RDV +W
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 431
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------------------- 461
N +IGGY KA F M+ N +T
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 491
Query: 462 -----------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
N+LIT Y + G + DLF +G RN+ +WN+++A G
Sbjct: 492 SAGFESDEHVKNSLITMYAKCGDLSSSQDLF-----NGLDNRNIITWNAMLAANAHHGHG 546
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
++ +++ +M+ F ++ + + L A A L ++ +++H A++ + + N
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
D Y+K G + ++ + + SWNI++S
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 639
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 238/549 (43%), Gaps = 85/549 (15%)
Query: 129 MYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFL 188
MY+K G + AR +FD M RN +W+ M+ R + E ++ F M G P F+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 189 LPKILQACGKCGDL-ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
+ ++ ACG+ G + G +H + G+ S + V+ +I+ +Y G + ++K+F+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV------------------------ 283
+R+ V+W +++ G+ G+ E+ + M+ EGV
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 284 -----------EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
E L N LI+ +G D A + +M D +W+S+ + +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE----RDTISWNSIAAAY 236
Query: 333 TQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
Q G + + M E NS TV IHG+ VKM V
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
N+L+ MY+ G A +F M +D+ SWN+++ + + G A L M S
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 453 DSPPNVVTW-----------------------------------NALITGYMQSGAEDQA 477
N VT+ NAL++ Y + G ++
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
+ ++ +R+V +WN+LI G+ + DKA+ F+ M+ ++ N +TV+S+L
Sbjct: 417 RRVLLQMP-----RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 538 AFANLVAG---KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKD 594
A L+ G ++ K +H + S+ V N LI YAK G+L S+ +F+GL ++
Sbjct: 472 AC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 529
Query: 595 IISWNIMLS 603
II+WN ML+
Sbjct: 530 IITWNAMLA 538
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 223/532 (41%), Gaps = 93/532 (17%)
Query: 30 ASTRVHANSNYVSMSIRSL-PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPIT 88
A V AN + M + L + M + +N +G DA+ +L S+ G V +T
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVN----DGRSLDALGLLCSMISSGKSVNYVT 364
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
+ + L +C D E GR LH + + G N + LVSMY K G +SE+R+V +M
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGR 206
R++ W+A+IG + ++ ++ + F M G + + +L AC GD LE G+
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
+H+ + G S V NS++ +YAKCG++ ++ LF +D R+ +TWNA++ +G
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
E+ K L+ KM SFG++ D +++S
Sbjct: 545 HGEEVLK-----------------------------------LVSKMRSFGVSLDQFSFS 569
Query: 327 SMIS-----GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+S ++G+ H L
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGL--------------------------------------- 590
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
VK+ D N+ DMYSKCG++ ++ R + SWN +I G+ +
Sbjct: 591 -AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 649
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
F +M + P VT+ +L+T G D+ L + I +D ++ + +I
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKE 550
+SG+ +A +M + PN + S+L + NL G+K E
Sbjct: 710 DLLGRSGRLAEAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAE 758
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 224/550 (40%), Gaps = 72/550 (13%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
VE L+SM G++ A +FD+M ER+ +W+++ A ++ EE +F M R
Sbjct: 197 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
+ + +L G + GR IH + ++ G S + V N+++ +YA G A
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW----------- 290
+FK M +D ++WN+++ F +G A +M G VT+
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 291 ------------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
N L++ Y ++G + ++ +M DV W+
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP----RRDVVAWN 432
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVK 385
++I G+ + AL + M + GV N ITV + +H V
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
D NSLI MY+KCGDL ++Q +F+ + R++ +WN ++ H G + +L
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 446 FMKMQDSDSPPNVVTWN-----ALITGYMQSGAE-----------------DQALDLFKR 483
KM+ + +++ A ++ G + + A D++ +
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 484 IEKDGK--------IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
+ G+ + R++ SWN LI+ + G ++ F M I P VT +S+
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 536 LPAFAN-LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK- 593
L A ++ + K + A L I +ID +SG L + +P+K
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732
Query: 594 DIISWNIMLS 603
+ + W +L+
Sbjct: 733 NDLVWRSLLA 742
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 240/508 (47%), Gaps = 42/508 (8%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---R 111
+ + S G +AV + G K TY +++S +E G+++HA +
Sbjct: 99 NVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIK 158
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
+G V +V +V L+S+Y K G +A KVF+EM ER++ +W++MI +
Sbjct: 159 LGFVSDV--YVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSL 216
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM-CSSIRVNNSIMAV 230
LF +M++ GF PD F L AC + G+ IH A+R + + V SI+ +
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE-GVEPGLVT 289
Y+K GE+ +A+++F M +R+ V WN +I + +NG + A F M E+ G++P ++T
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 290 -WNILIAS------------------------------YNQLGRCDIAVDLMRKMESFGL 318
N+L AS Y + G+ A + +M
Sbjct: 337 SINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE--- 393
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
+V +W+S+I+ + Q G+ Y AL+L +++ S + P+S T+ E
Sbjct: 394 -KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IH VK + + NSL+ MY+ CGDLE A++ F+ + +DV SWN+II Y GF
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGF 512
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+ LF +M S PN T+ +L+ SG D+ + F+ ++++ I + +
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYG 572
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
++ ++G A + M F A
Sbjct: 573 CMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 195/427 (45%), Gaps = 69/427 (16%)
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A +LF M++ D+ WN +I GF G +A +++ M GV+ T+ +I S
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 300 LGRCDIAVDLMRKMESFGLTPDVY-------------------------------TWSSM 328
+ + + + G DVY +W+SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
ISG+ G + +L L ++ML G +P+ + EIH V+ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 389 -VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
DV+ S++DMYSK G++ A+RIF+ M +R++ +WN +IG Y G A+ F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 448 KM--QDSDSP------------------------------PNVVTWNALITGYMQSGAED 475
KM Q+ P P++V ALI Y + G
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
A +F R+ + +NV SWNS+IA ++Q+G+ A+++F+ + + P+S T+ SI
Sbjct: 383 SAEVIFDRMAE-----KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 536 LPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
LPA+A ++ + +EIH ++ S + N L+ YA G+L +R+ F+ + LKD+
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 596 ISWNIML 602
+SWN ++
Sbjct: 498 VSWNSII 504
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 219/498 (43%), Gaps = 75/498 (15%)
Query: 108 LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
L R + VN T+ + ++ + +A ++FDEM + + F W+ MI + +
Sbjct: 52 LRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLY 111
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
E V + MV G D F P ++++ LE G+ IH++ I+ G S + V NS+
Sbjct: 112 IEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL 171
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG- 286
+++Y K G A+K+F+ M ERD V+WN++I+G+ GD + F M + G +P
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 287 ------------------------------LVTWNILIAS-----YNQLGRCDIAVDLMR 311
+ T ++++ + Y++ G A +
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML-LSGVEPNSITVXXXXXXXXXX 370
M + ++ W+ MI + + GR A +KM +G++P+ IT
Sbjct: 292 GM----IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT----SINLLPA 343
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTII 430
IHG ++ + ++ +LIDMY +CG L++A+ IFD M E++V SWN+II
Sbjct: 344 SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK---- 486
Y G A ELF ++ DS P+ T +++ Y +S + + ++ I K
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 487 --------------------DGK------IKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
D + + ++V SWNS+I + G ++ +F M
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Query: 521 QFFQIAPNSVTVLSILPA 538
++ PN T S+L A
Sbjct: 524 IASRVNPNKSTFASLLAA 541
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 151/318 (47%), Gaps = 36/318 (11%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
D + W+ MI GFT G A+ +M+ +GV+ ++ T +IH
Sbjct: 94 DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIH 153
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+ +K+ V DV NSLI +Y K G A+++F+ M ERD+ SWN++I GY G
Sbjct: 154 AMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGF 213
Query: 441 KAYELFMKMQDSDSPPN-VVTWNAL-------------------ITGYMQSG---AEDQA 477
+ LF +M P+ T +AL + +++G
Sbjct: 214 SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSI 273
Query: 478 LDLFKRIEK--------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPN 528
LD++ + + +G I+RN+ +WN +I + ++G+ A F++M + + P+
Sbjct: 274 LDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
+T +++LPA A L + IH A+RR + + + LID Y + G L + IFD
Sbjct: 334 VITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 589 GLPLKDIISWNIMLSQEI 606
+ K++ISWN +++ +
Sbjct: 390 RMAEKNVISWNSIIAAYV 407
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ G+ S + AL LF + K + WN +I GF G +A+Q + RM F
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKA-----DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
+ ++ T ++ + A + + ++ K+IH ++ VS++ V N LI Y K G +
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 585 RIFDGLPLKDIISWNIMLS 603
++F+ +P +DI+SWN M+S
Sbjct: 186 KVFEEMPERDIVSWNSMIS 204
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 212/441 (48%), Gaps = 34/441 (7%)
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
GL+G+V+ V T L+SMYSKCG L A ++F + +R++ +WSAMI + + +E +
Sbjct: 330 GLIGDVS--VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
LF DM+R P+ L +LQ C G+ IH AI+ + S + +++++YA
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYA 447
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP------G 286
KCG A K F+ + +D+V +NA+ G+ Q GD +A + M+ GV P G
Sbjct: 448 KCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 287 LVTWNILIASY--------------------------NQLGRCDIAVDLMRKMESFGLTP 320
++ + Y N +CD + + G
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+W+ M++G+ G+ A+ R+M + +PN++T +H
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVH 627
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
++ GNSL+DMY+KCG +E++++ F + + + SWNT++ Y G
Sbjct: 628 SSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLAS 687
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
A LF+ MQ+++ P+ V++ ++++ +G ++ +F+ + + KI+ V + +
Sbjct: 688 CAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACM 747
Query: 501 IAGFLQSGQKDKAMQIFRRMQ 521
+ ++G +A+++ RRM+
Sbjct: 748 VDLLGKAGLFGEAVEMMRRMR 768
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/598 (24%), Positives = 264/598 (44%), Gaps = 85/598 (14%)
Query: 79 EQGSKVRPITYMNLLQSCIDRDCIEVGRELH---ARIGLVGNVNPFVETKLVSMYSKCGH 135
E+G ++ L++C + G +H A +GL +V ++ T LV MY K
Sbjct: 93 EKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDV--YIGTALVEMYCKARD 150
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
L AR+VFD+M +++ TW+ M+ ++ + LF+DM D L ++ A
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
K + R +H + I+ G + ++ ++ +Y C ++ A+ +F+ + +D +W
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAF--SSGLIDMYCNCADLYAAESVFEEVWRKDESSW 268
Query: 256 NAIITGFCQNGDIEQARKYFD-------------------------------AMQEEGVE 284
++ + NG E+ + FD A+ + V+
Sbjct: 269 GTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ 328
Query: 285 PGLV----TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
GL+ L++ Y++ G +IA L +E DV +WS+MI+ + Q G+
Sbjct: 329 QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED----RDVVSWSAMIASYEQAGQHDE 384
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A+ L R M+ ++PN++T+ IH +K + ++ T ++I
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
MY+KCG A + F+ + +D ++N + GY G KA++++ M+ P+ T
Sbjct: 445 MYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRT 504
Query: 461 W-----------------------------------NALITGYMQSGAEDQALDLFKRIE 485
+ALI + + A A+ LF +
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC- 563
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+++ SWN ++ G+L GQ ++A+ FR+M+ + PN+VT ++I+ A A L A
Sbjct: 564 ---GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSAL 620
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ +H ++ S+ V N L+D YAK G + S + F + K I+SWN MLS
Sbjct: 621 RVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 234/555 (42%), Gaps = 122/555 (21%)
Query: 86 PITYMNLL---QSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKV 142
PI Y NLL + C + C+ ++H + +V + P +L++ YS +R +
Sbjct: 2 PINYTNLLLMLRECKNFRCL---LQVHGSL-IVSGLKP--HNQLINAYSLFQRQDLSRVI 55
Query: 143 FDEMRERNLFTWSAMIGACSREKSWEEVVDLF-YDMVRHGFLPDEFLLPKILQACGKCGD 201
FD +R+ + W++MI +R E + F Y G PD++ L+AC D
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
+ G +R+++ I EMG E D A++
Sbjct: 116 FKKG---------------LRIHDLI-------AEMGL---------ESDVYIGTALVEM 144
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+C+ D+ AR+ FD M D
Sbjct: 145 YCKARDLVSARQVFDKMH---------------------------------------VKD 165
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V TW++M+SG Q G + AL L M V+ + +++ +HG
Sbjct: 166 VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG 225
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ +K + +G LIDMY C DL AA+ +F+ ++ +D SW T++ Y H GF +
Sbjct: 226 LVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 442 AYELFMKMQDSDSPPN-----------------------------------VVTWNALIT 466
ELF M++ D N V +L++
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
Y + G + A LF IE R+V SW+++IA + Q+GQ D+A+ +FR M I
Sbjct: 344 MYSKCGELEIAEQLFINIED-----RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
PN+VT+ S+L A + A + K IHC A++ ++ SE+ + +I YAK G + +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 587 FDGLPLKDIISWNIM 601
F+ LP+KD +++N +
Sbjct: 459 FERLPIKDAVAFNAL 473
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/589 (25%), Positives = 268/589 (45%), Gaps = 68/589 (11%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+ ++ L NG S A+ + + + ++ NL+ + + +V R LH +
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
G + F + L+ MY C L A VF+E+ ++ +W M+ A + +EEV++LF
Sbjct: 230 KGFIFAF-SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M + ++ LQA GDL G IH A++ G+ + V S+M++Y+KC
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
GE+ A++LF ++++RD V+W+A+I + Q G ++A F M ++P VT ++
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 295 -----ASYNQLGRC----DIAVDLMRKMES--------------------FGLTP--DVY 323
+ ++LG+ I D+ ++E+ F P D
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
++++ G+TQ G A D+ + M L GV P+S T+ ++G
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGGYCHAGFCGKA 442
+K + ++LI+M++KC L AA +FD +E+ SWN ++ GY G +A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 443 YELFMKMQDSDSPPNVVTW----------NALITG------YMQSGAEDQA------LDL 480
F +M+ PN VT+ +AL G +Q G Q +D+
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDM 648
Query: 481 FKR---IEKDGKI-----KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
+ + IE K + + SWN++++ + G A+ +F MQ ++ P+SV+
Sbjct: 649 YAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSF 708
Query: 533 LSILPA--FANLV-AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
LS+L A A LV GK++ E R + +E+ ++D K+G
Sbjct: 709 LSVLSACRHAGLVEEGKRIFEEM--GERHKIEAEVEHYACMVDLLGKAG 755
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 33/347 (9%)
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
GL N LI +Y+ R D++ + + P V W+SMI G+T+ G AL
Sbjct: 32 GLKPHNQLINAYSLFQRQDLSRVIFDSVRD----PGVVLWNSMIRGYTRAGLHREALGFF 87
Query: 346 RKMLLS-GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
M G++P+ + IH + +M L DV G +L++MY K
Sbjct: 88 GYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK 147
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
DL +A+++FD M+ +DV +WNT++ G G A LF M+ + V+ L
Sbjct: 148 ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNL 207
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKI----------------------------KRNVAS 496
I + D L + K G I +++ +S
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
W +++A + +G ++ +++F M+ + + N V S L A A + K IH A+
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ L+ ++SV+ L+ Y+K G L + ++F + +D++SW+ M++
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/569 (27%), Positives = 267/569 (46%), Gaps = 60/569 (10%)
Query: 21 YSASQFEFIASTRVHANSNYVSMSIRSLPYPK-FMDAQLNQLCSNGPLSDAV----AILD 75
YSAS+ +A+ A+ Y +P P F L + ++GP D V A LD
Sbjct: 63 YSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLD 120
Query: 76 SLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH--ARIGLVGNVNPFVETKLVSMYSKC 133
++E T+ L+++ + + +G+ LH A VG+ + FV L+ Y C
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS-DVFVANSLIHCYFSC 179
Query: 134 GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
G L A KVF ++E+++ +W++MI ++ S ++ ++LF M + +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV 253
AC K +LE GR + S + + ++ + N+++ +Y KCG + AK+LF +M+E+D+V
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
TW ++ G+ + D E AR+ ++M ++ + V WN LI++Y Q G+ + A+ +
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDI----VAWNALISAYEQNGKPNEALIV---- 351
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
+H L L + M L N IT+
Sbjct: 352 -------------------------FHELQLQKNMKL-----NQITLVSTLSACAQVGAL 381
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
IH K + + ++LI MYSKCGDLE ++ +F+ + +RDV+ W+ +IGG
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
G +A ++F KMQ+++ PN VT+ + +G D+A LF ++E + I
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
+ ++ +SG +KA++ M P S +V L + A + E+ C
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPI----PPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 554 CAL----RRNLVSEISVSNILIDSYAKSG 578
L RN + + +SNI YAK G
Sbjct: 558 TRLLELEPRNDGAHVLLSNI----YAKLG 582
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 36/399 (9%)
Query: 64 NGPLSDAVAILDSLAEQGS-KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
NG ++A+ + L Q + K+ IT ++ L +C +E+GR +H+ I G +N
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V + L+ MYSKCG L ++R+VF+ + +R++F WSAMIG + E VD+FY M
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 182 FLPDEFLLPKILQACGKCGDL-ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
P+ + AC G + E L H + +G+ + I+ V + G + A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 241 KKLFKSMDERDSVT-WNAIITGFCQ-NGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-Y 297
K ++M S + W A++ G C+ + ++ A + E +EP ++L+++ Y
Sbjct: 522 VKFIEAMPIPPSTSVWGALL-GACKIHANLNLAEMACTRLLE--LEPRNDGAHVLLSNIY 578
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK---GRTYHAL---------DLL 345
+LG+ + +L + M GL + S I G + G H + +++
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS-----LID 400
K+ +G EP + +H K+++ +++ + +I
Sbjct: 639 EKLKSNGYEPE---ISQVLQIIEEEEMKEQSLNLH--SEKLAICYGLISTEAPKVIRVIK 693
Query: 401 MYSKCGDLEAAQRIFDMMYERDV-----YSWNTIIGGYC 434
CGD + ++ +Y+R++ Y ++ G C
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 82/299 (27%)
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDM--YSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH 435
+ HG ++ D + + L M S LE A+++FD + + + ++WNT+I Y
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 436 AGFCGKAYELFMKM-QDSDSPPNVVTW--------------------------------- 461
+ F+ M +S PN T+
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 462 --NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
N+LI Y G D A +F I++ ++V SWNS+I GF+Q G DKA+++F++
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKE-----KDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 520 MQFFQIAPNSVTVLSILPAFA---NLVAGKKVKEIHCCALRRNLVS-EISVSNILIDSYA 575
M+ + + VT++ +L A A NL G++V C + N V+ ++++N ++D Y
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQV----CSYIEENRVNVNLTLANAMLDMYT 278
Query: 576 KSGNLMYSRRIFDGL-------------------------------PLKDIISWNIMLS 603
K G++ ++R+FD + P KDI++WN ++S
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/638 (25%), Positives = 282/638 (44%), Gaps = 118/638 (18%)
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
Q + V + + + C + +E+G++ HA + + G FV L+ +Y+
Sbjct: 42 QVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREK------------------SWEEV---------- 170
A VFD+M R++ +W+ MI S+ SW +
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 171 ---VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+++F DM R G D IL+ C D G IH + +R G + + +++
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE--EGVEP 285
+ +YAK + ++F+ + E++SV+W+AII G QN + A K+F MQ+ GV
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 286 GL---VTWNILIASYNQLG--------RCDIAVDLMRKMESFGLTP-------------- 320
+ V + S +LG + D A D + + + +
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 321 ----DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
+ ++++MI+G++Q+ + AL L +++ SG+ + I++
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
+I+G+ +K SL DV N+ IDMY KC L A R+FD M RD SWN II +
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 437 GFCGKAYE---LFMKMQDSDSPPNVVTWNALIT-------GY--------MQSGAEDQA- 477
GK YE LF+ M S P+ T+ +++ GY ++SG +
Sbjct: 462 ---GKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSS 518
Query: 478 -----LDLFKR---IEKDGKI------KRNVA-------------------SWNSLIAGF 504
+D++ + IE+ KI + NV+ SWNS+I+G+
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
+ Q + A +F RM I P+ T ++L ANL + K+IH +++ L S++
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ + L+D Y+K G+L SR +F+ +D ++WN M+
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 676
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/651 (22%), Positives = 274/651 (42%), Gaps = 88/651 (13%)
Query: 36 ANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS 95
ANS + M +R + ++ L+ NG ++ + + +G + T+ +L+
Sbjct: 133 ANSFFNMMPVRDVVS---WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 96 CIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTW 154
C + +G ++H + VG + + + L+ MY+K E+ +VF + E+N +W
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 155 SAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIR 214
SA+I C + + F +M + + + +L++C +L G +H+ A++
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 215 HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKY 274
+ V + + +YAKC M A+ LF + + + ++NA+ITG+ Q +A
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 275 FDAMQE--------------------EGVEPGLVTWNILIASYNQLGRC--DIAVDLMRK 312
F + +G+ GL + + I S L C + A+D+ K
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 313 MESFGLT---------PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXX 363
++ D +W+++I+ Q G+ Y L L ML S +EP+ T
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF-GS 488
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD- 422
EIH VK + + G SLIDMYSKCG +E A++I ++R
Sbjct: 489 ILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 423 -------------------VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
SWN+II GY A LF +M + P+ T+
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 464 LI---TGYMQSGAEDQA-------------------LDLF--------KRIEKDGKIKRN 493
++ +G Q +D++ R+ + ++R+
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 668
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL-VAGKKVKEIH 552
+WN++I G+ G+ ++A+Q+F RM I PN VT +SIL A A++ + K ++ +
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFY 728
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
L ++ + ++D KSG + + + +P + D + W +L
Sbjct: 729 MMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 188/444 (42%), Gaps = 73/444 (16%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+ + C K G LE G+ H+ I G + V N ++ VY + A +F M RD
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
+V+WN +I Y++ + D+ +
Sbjct: 114 -----------------------------------VVSWNKMINGYSK------SNDMFK 132
Query: 312 KMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
F + P DV +W+SM+SG+ Q G + ++++ M G+E + T
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
+IHGI V++ DV+ ++L+DMY+K + R+F + E++ SW+ I
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW---------------------NALITGY 468
I G A + F +MQ ++ + + +AL + +
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 469 MQSG-AEDQALDLFKRIE--KDGKI------KRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
G LD++ + + +D +I N S+N++I G+ Q KA+ +F R
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
+ + + +++ + A A + + +I+ A++ +L ++ V+N ID Y K
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 580 LMYSRRIFDGLPLKDIISWNIMLS 603
L + R+FD + +D +SWN +++
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIA 456
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 50/344 (14%)
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI-SGFTQKGRTYHALDLLRKMLLSGVE 354
SY ++ D + ++ S T + + G + G+ HA M++SG
Sbjct: 26 SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHA-----HMIISGFR 80
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P + + + KM L DV++ N +I+ YSK D+ A
Sbjct: 81 PTTFVLNCLLQVYTNSRDFVSASMVFD---KMPL-RDVVSWNKMINGYSKSNDMFKANSF 136
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM----------------------QDS 452
F+MM RDV SWN+++ GY G K+ E+F+ M +D+
Sbjct: 137 FNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 196
Query: 453 D-------------SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
+VV +AL+ Y + ++L +F+ I + +N SW++
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE-----KNSVSWSA 251
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
+IAG +Q+ A++ F+ MQ + S+L + A L + ++H AL+ +
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ V +D YAK N+ ++ +FD + S+N M++
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 232/499 (46%), Gaps = 50/499 (10%)
Query: 84 VRPITYMNLLQSCIDRDCIE-----VGRELHARIGLVGNVNPFVE--TKLVSMYSKCGHL 136
V P +Y+ LL S + E GRE+H + G V+ V LV+MY+KCG +
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 365
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC 196
++AR+VF M +++ +W++MI + + E V+ + M RH LP F L L +C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
+ G+ IH +++ G+ ++ V+N++M +YA+ G + +K+F SM E D V+WN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 257 AIITGFCQNG-DIEQARKYFDAMQEEGVEPGLVTW------------------------- 290
+II ++ + +A F Q G + +T+
Sbjct: 486 SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK 545
Query: 291 ----------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
N LIA Y + G D + +M D TW+SMISG+
Sbjct: 546 NNIADEATTENALIACYGKCGEMDGCEKIFSRMAE---RRDNVTWNSMISGYIHNELLAK 602
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
ALDL+ ML +G +S E+H V+ L DV+ G++L+D
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ-DSDSPPNVV 459
MYSKCG L+ A R F+ M R+ YSWN++I GY G +A +LF M+ D +PP+ V
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+ +++ +G ++ F+ + + + ++ + ++G+ DK +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 520 MQFFQIAPNSVTVLSILPA 538
M + PN + ++L A
Sbjct: 783 M---PMKPNVLIWRTVLGA 798
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 267/598 (44%), Gaps = 90/598 (15%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVGN---VNPFVETKLVSMYSKCGHLSEARKVFDEM 146
++ +QSC+ R H+R L N + ++ L++ Y + G ARKVFDEM
Sbjct: 7 LSFVQSCVGHR--GAARFFHSR--LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET-- 204
RN +W+ ++ SR +E + DMV+ G +++ +L+AC + G +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKC-GEMGFAKKLFKSMDERDSVTWNAIITGFC 263
GR IH + + V+N ++++Y KC G +G+A F ++ ++SV+WN+II+ +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV--DLMRKMESFGLTPD 321
Q GD A + F +MQ +G P T+ L+ + L D+ + +M ++ GL D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKM----------LLSG------------------- 352
++ S ++S F + G +A + +M L+ G
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 353 ---VEPNSITVXXXX---XXXXXXXXXXXXXEIHGIGVKMSLVDDVL-TGNSLIDMYSKC 405
V P S + E+HG + LVD ++ GN L++MY+KC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 406 GDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP--------- 456
G + A+R+F M ++D SWN++I G G +A E + M+ D P
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 457 --------------------------NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
NV NAL+T Y ++G ++ +F + + ++
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 491 KRNVASWNSLIAGFLQSGQK-DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
SWNS+I +S + +A+ F Q N +T S+L A ++L G+ K
Sbjct: 483 -----SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 550 EIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP-LKDIISWNIMLSQEI 606
+IH AL+ N+ E + N LI Y K G + +IF + +D ++WN M+S I
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 251/565 (44%), Gaps = 95/565 (16%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM--- 177
FV + LVS ++K G LS ARKVF++M RN T + ++ R+K EE LF DM
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 178 -----VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMAVY 231
+ L F + + G L+ GR +H I G+ + + N ++ +Y
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
AKCG + A+++F M ++DSV+WN++ITG QNG +A + + +M+ + PG T
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT-- 417
Query: 292 ILIAS--------YNQLGR------CDIAVDL--------------------MRKMESFG 317
LI+S + +LG+ + +DL RK+ S
Sbjct: 418 -LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 318 LTPDVYTWSSMISGFTQKGRTY-HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
D +W+S+I + R+ A+ +G + N IT
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE-RDVYSWNTIIGGYCH 435
+IHG+ +K ++ D+ T N+LI Y KCG+++ ++IF M E RD +WN++I GY H
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 436 AGFCGKAYELFMKM----QDSDS-------------------------------PPNVVT 460
KA +L M Q DS +VV
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+AL+ Y + G D AL F + RN SWNS+I+G+ + GQ ++A+++F M
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMP-----VRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 521 QF-FQIAPNSVTVLSILPAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
+ Q P+ VT + +L A ++ + + K + L I + + D ++G
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 579 NLMYSRRIFDGLPLK-DIISWNIML 602
L + +P+K +++ W +L
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 215/496 (43%), Gaps = 56/496 (11%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
++ + L NG +AV S+ T ++ L SC ++G+++H
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 115 VG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR-EKSWEEVVD 172
+G ++N V L+++Y++ G+L+E RK+F M E + +W+++IGA +R E+S E V
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
F + R G + +L A E G+ IH +A+++ + N+++A Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 233 KCGEMGFAKKLFKSMDE-RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG--------- 282
KCGEM +K+F M E RD+VTWN++I+G+ N + +A M + G
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 283 --------------------------VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
+E +V + L+ Y++ GR D A+ M
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP-- 681
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSIT-VXXXXXXXXXXXXXX 374
+ Y+W+SMISG+ + G+ AL L M L G P+ +T V
Sbjct: 682 --VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGGY 433
+ L + + + D+ + G+L+ + + M + +V W T++G
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 434 CHAG-----FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
C A KA E+ +++ P N V + L Y G + + K++ KD
Sbjct: 800 CRANGRKAELGKKAAEMLFQLE----PENAVNYVLLGNMYAAGGRWEDLVKARKKM-KDA 854
Query: 489 KIKRNVA-SWNSLIAG 503
+K+ SW ++ G
Sbjct: 855 DVKKEAGYSWVTMKDG 870
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 223/490 (45%), Gaps = 40/490 (8%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLV 127
D + + L +G ++ P + + L+ + D E+ LH+ I +G + N FV L+
Sbjct: 129 DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALI 188
Query: 128 SMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEF 187
+ YS CG + AR VF+ + +++ W+ ++ +E+ + L M GF+P+ +
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
L+A G + + +H ++ RV ++ +Y + G+M A K+F M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP---------------------- 285
+ D V W+ +I FCQNG +A F M+E V P
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 286 ---GLVT----------WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
GLV N LI Y + + D AV L ++ S + +W+++I G+
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS----KNEVSWNTVIVGY 424
Query: 333 TQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
G A + R+ L + V +T ++HG+ +K + V
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
NSLIDMY+KCGD++ AQ +F+ M DV SWN +I GY G +A + M+D
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
D PN +T+ +++G +G DQ + F+ + +D I+ + + ++ +SGQ DK
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 513 AMQIFRRMQF 522
AM++ + +
Sbjct: 605 AMKLIEGIPY 614
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 65/480 (13%)
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
D +L+ C + D + + IH ++ G C + N ++ Y K G A LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 245 KSMDERDSVTWNAIITGF-CQNGDIEQAR-----------------KYFDAMQEEGVEPG 286
M ER++V++ + G+ CQ+ +R K F ++ + + P
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 287 L-------------VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFT 333
L LI +Y+ G +VD R + L D+ W+ ++S +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCG----SVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
+ G +L LL M ++G PN+ T +HG +K V D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
G L+ +Y++ GD+ A ++F+ M + DV W+ +I +C GFC +A +LF++M+++
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 454 SPPNVVTWNALITGYMQ---SGAEDQ-------------------ALDLFKRIEK-DGKI 490
PN T ++++ G SG +Q +D++ + EK D +
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 491 K-------RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
K +N SWN++I G+ G+ KA +FR Q++ VT S L A A+L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ ++H A++ N +++VSN LID YAK G++ +++ +F+ + D+ SWN ++S
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/588 (23%), Positives = 251/588 (42%), Gaps = 78/588 (13%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGN-VNPFVETKLVSMYSKCGHLSEARKVFDEM 146
Y +L+ CI ++ + +H I G+ ++ F L++ Y K G +A +FDEM
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
ERN ++ + ++ + ++ + L+ + R G + + L+ E
Sbjct: 111 PERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
+HS ++ G S+ V +++ Y+ CG + A+ +F+ + +D V W I++ + +NG
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV------------------- 307
E + K M+ G P T++ + + LG D A
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 308 ----------DLMRKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
D+ + F P DV WS MI+ F Q G A+DL +M + V P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
N T+ ++HG+ VK+ D+ N+LID+Y+KC ++ A ++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELF---MKMQ---------------------- 450
+ ++ SWNT+I GY + G GKA+ +F ++ Q
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 451 ----------DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+++ V N+LI Y + G A +F +E +VASWN+L
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-----TIDVASWNAL 521
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
I+G+ G +A++I M+ PN +T L +L +N + +E +R +
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 561 VSE-ISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLSQEI 606
+ + ++ +SG L + ++ +G+P + ++ W MLS +
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 60 QLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NV 118
+ C NG ++AV + + E T ++L C C +G +LH + VG ++
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
+ +V L+ +Y+KC + A K+F E+ +N +W+ +I + +F + +
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R+ E L AC ++ G +H +AI+ + V+NS++ +YAKCG++
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
FA+ +F M+ D +WNA+I+G+ +G QA + D M++ +P +T+ +++ +
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 299 QLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
G D + M G+ P + ++ M+ + G+ A+ L+
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 237/475 (49%), Gaps = 48/475 (10%)
Query: 132 KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
+ G+++EAR +F+++ RN TW+ MI + + + LF M + + ++
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 192 ILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
+ +CG LE R L + R N++++ YAK +G A LF+ M ER
Sbjct: 112 YV-SCGGIRFLEEARKLFDEMPSRDSFSW-----NTMISGYAKNRRIGEALLLFEKMPER 165
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
++V+W+A+ITGFCQNG+++ A F M + P L+A + R A ++
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCA----LVAGLIKNERLSEAAWVL 221
Query: 311 RKMESF--GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ S G VY ++++I G+ Q+G+ A L ++ P+
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI------PD------------ 263
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
+ HG + +V++ NS+I Y K GD+ +A+ +FD M +RD SWNT
Sbjct: 264 ------LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNT 317
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I GY H A+ LF +M + D+ +WN +++GY G + A F++
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYASVGNVELARHYFEKTP--- 370
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+++ SWNS+IA + ++ +A+ +F RM P+ T+ S+L A LV +
Sbjct: 371 --EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
++H + + ++ ++ V N LI Y++ G +M SRRIFD + LK ++I+WN M+
Sbjct: 429 MQMHQIVV-KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 236/549 (42%), Gaps = 99/549 (18%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+ +LNQ+ +G +++A I + L + + +T+ ++ + R + R+L +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNT----VTWNTMISGYVKRREMNQARKL---FDV 96
Query: 115 VGNVNPFVETKLVSMYSKCG---HLSEARKVFDEMR------------------------ 147
+ + ++S Y CG L EARK+FDEM
Sbjct: 97 MPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEAL 156
Query: 148 -------ERNLFTWSAMIGACSREKSWEEVVDLFYDM----------VRHGFLPDE---- 186
ERN +WSAMI + + V LF M + G + +E
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 187 -------------------FLLPKILQACGKCGDLETGRLI-----------HSVAIRHG 216
+ ++ G+ G +E R + H R
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFD 276
C ++ NS++ Y K G++ A+ LF M +RD+++WN +I G+ +E A F
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT--WSSMISGFTQ 334
M +WN++++ Y +G ++A K TP+ +T W+S+I+ + +
Sbjct: 337 EMPNRDAH----SWNMMVSGYASVGNVELARHYFEK------TPEKHTVSWNSIIAAYEK 386
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
A+DL +M + G +P+ T+ ++H I VK +++ DV
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK-TVIPDVPV 445
Query: 395 GNSLIDMYSKCGDLEAAQRIFD-MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
N+LI MYS+CG++ ++RIFD M +R+V +WN +IGGY G +A LF M+ +
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
P+ +T+ +++ +G D+A F + KI+ + ++SL+ GQ ++A
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
Query: 514 MQIFRRMQF 522
M I M F
Sbjct: 566 MYIITSMPF 574
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 87/291 (29%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG---FCGKAYELFM 447
+ +T N++I Y K ++ A+++FD+M +RDV +WNT+I GY G F +A +LF
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M DS +WN +I+GY ++ +AL LF+++ + RN SW+++I GF Q+
Sbjct: 130 EMPSRDS----FSWNTMISGYAKNRRIGEALLLFEKMPE-----RNAVSWSAMITGFCQN 180
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLS------------ILPAFANLVAGK--------- 546
G+ D A+ +FR+M +P V +L + +LV+G+
Sbjct: 181 GEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNT 240
Query: 547 ---------KVKEIHC--------CA------LRRNLVSEISVSNILIDSYAKSGNLMYS 583
+V+ C C R + N +I +Y K G+++ +
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 584 RRIFDGL-------------------------------PLKDIISWNIMLS 603
R +FD + P +D SWN+M+S
Sbjct: 301 RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP--F 121
N +AV + + +G K P T +LL + + +G ++H + V V P
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV--VKTVIPDVP 444
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMR-ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V L++MYS+CG + E+R++FDEM+ +R + TW+AMIG + + E ++LF M +
Sbjct: 445 VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G P +L AC G ++ + S+M+VY
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFV---------------SMMSVY--------- 540
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS---Y 297
K+ M+ +++++ G E+A +M EP W L+ + Y
Sbjct: 541 -KIEPQMEH-----YSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDACRIY 591
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDV 322
N +G +A + M ++E TP V
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYV 616
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 255/551 (46%), Gaps = 120/551 (21%)
Query: 91 NLLQSCIDRDCIEVGREL-HARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
NLLQ +++ +L H R+ GL+ +V ++ L+++YSK G+ ARK+FDEM
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSV--YLMNNLMNVYSKTGYALHARKLFDEM 75
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLF-------------------------------Y 175
R F+W+ ++ A S+ + + F
Sbjct: 76 PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMG 135
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
DMV+ G P +F L +L + +ETG+ +HS ++ G+ ++ V+NS++ +YAKCG
Sbjct: 136 DMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ AK +F M RD +WNA+I Q G ++ A F+ M E + VTWN +I+
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMIS 251
Query: 296 SYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+NQ G A+D+ KM L+PD +T +S++S + + ++ +G +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
+ I + N+LI MYS+CG +E A+R+
Sbjct: 312 ISGIVL-----------------------------------NALISMYSRCGGVETARRL 336
Query: 415 FDMMYERD--VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
+ +D + + ++ GY G +A +F+ ++D D VV W A+I GY Q G
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD----VVAWTAMIVGYEQHG 392
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
+ +A++LF+ S++ G GQ+ PNS T+
Sbjct: 393 SYGEAINLFR----------------SMVGG----GQR----------------PNSYTL 416
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
++L ++L + K+IH A++ + +SVSN LI YAK+GN+ + R FD +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 593 -KDIISWNIML 602
+D +SW M+
Sbjct: 477 ERDTVSWTSMI 487
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 230/512 (44%), Gaps = 82/512 (16%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPF 121
G A+ ++ + ++G + T N+L S C+E G+++H+ ++GL GNV+
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS-- 182
Query: 122 VETKLVSMYSKCGHLSEARKVFD-------------------------------EMRERN 150
V L++MY+KCG A+ VFD +M ER+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 151 LFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGKCGDLETGRLIH 209
+ TW++MI ++ +D+F M+R L PD F L +L AC L G+ IH
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVT--WNAIITGFCQNGD 267
S + G S V N+++++Y++CG + A++L + +D + A++ G+ + GD
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+ QA+ F ++++ V V W +I Y Q G A++L R M G P+ YT ++
Sbjct: 363 MNQAKNIFVSLKDRDV----VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
M+S + H +IHG VK
Sbjct: 419 MLSVASSLASLSHG-----------------------------------KQIHGSAVKSG 443
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY-ERDVYSWNTIIGGYCHAGFCGKAYELF 446
+ V N+LI MY+K G++ +A R FD++ ERD SW ++I G +A ELF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
M P+ +T+ + + +G +Q F ++ KI ++ + ++ F +
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+G +A + +M I P+ VT S+L A
Sbjct: 564 AGLLQEAQEFIEKM---PIEPDVVTWGSLLSA 592
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 40/225 (17%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
+H +K L+ V N+L+++YSK G A+++FD M R +SWNT++ Y G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
E F ++ DS V+W +I GY +N+
Sbjct: 96 MDSTCEFFDQLPQRDS----VSWTTMIVGY-----------------------KNI---- 124
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
GQ KA+++ M I P T+ ++L + A + K++H ++
Sbjct: 125 ---------GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL 175
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L +SVSN L++ YAK G+ M ++ +FD + ++DI SWN M++
Sbjct: 176 GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/575 (24%), Positives = 260/575 (45%), Gaps = 86/575 (14%)
Query: 102 IEVGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA 160
++ + LHAR+ + + N + KLV++Y G+++ AR FD ++ R+++ W+ MI
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 161 CSREKSWEEVVDLF-YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS 219
R + EV+ F M+ G PD P +L+AC D G IH +A++ G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
+ V S++ +Y++ +G A+ LF M RD +WNA+I+G+CQ+G+ ++A + ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 280 -------------------------------EEGVEPGLVTWNILIASYNQLGR---CDI 305
+ G+E L N LI Y + GR C
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
D M D+ +W+S+I + + A+ L ++M LS ++P+ +T+
Sbjct: 304 VFDRM-------YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 366 XXXXXXXXXXXXEIHGIGVKMS-LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY 424
+ G ++ ++D+ GN+++ MY+K G +++A+ +F+ + DV
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
SWNTII GY GF +A E++ M ++ + N TW +++ Q+GA Q + L R
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 484 IEKDG-----------------------------KIKR-NVASWNSLIAGFLQSGQKDKA 513
+ K+G +I R N WN+LIA G +KA
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC----ALRRNLVSEISVSNI 569
+ +F+ M + P+ +T +++L A ++ V E C + +
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSH---SGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
++D Y ++G L + + + L+ D W +LS
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 228/500 (45%), Gaps = 47/500 (9%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
T+ ++L++C R I+ G ++H + G + +V +V L+ +YS+ + AR +FD
Sbjct: 155 TFPSVLKAC--RTVID-GNKIHCLALKFGFMWDV--YVAASLIHLYSRYKAVGNARILFD 209
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLP-DEFLLPKILQACGKCGDLE 203
EM R++ +W+AMI + + +E + L +G D + +L AC + GD
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
G IHS +I+HG+ S + V+N ++ +YA+ G + +K+F M RD ++WN+II +
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRC------------------DI 305
N +A F M+ ++P +T L + +QLG DI
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 306 A--------------VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
VD R + ++ DV +W+++ISG+ Q G A+++ M
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 352 G-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
G + N T ++HG +K L DV SL DMY KCG LE
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
A +F + + WNT+I + G KA LF +M D P+ +T+ L++
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
SG D+ F+ ++ D I ++ + ++ + ++GQ + A++ + M A
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWG 624
Query: 531 TVLSILPAFANLVAGKKVKE 550
+LS N+ GK E
Sbjct: 625 ALLSACRVHGNVDLGKIASE 644
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 203/481 (42%), Gaps = 95/481 (19%)
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
C +L++ + +H+ + ++ ++ ++ +Y G + A+ F + RD WN +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 259 ITGFCQNGDIEQARKYFDA-MQEEGVEPGLVT---------------------------W 290
I+G+ + G+ + + F M G+ P T W
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW 183
Query: 291 NILIAS--------YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
++ +A+ Y +G I D M D+ +W++MISG+ Q G AL
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMP-------VRDMGSWNAMISGYCQSGNAKEAL 236
Query: 343 DL---LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
L LR M +S+TV IH +K L ++ N LI
Sbjct: 237 TLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
D+Y++ G L Q++FD MY RD+ SWN+II Y +A LF +M+ S P+ +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 460 T----------------------------W--------NALITGYMQSGAEDQALDLFKR 483
T W NA++ Y + G D A +F
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILPAFANL 542
+ +V SWN++I+G+ Q+G +A++++ M + +IA N T +S+LPA +
Sbjct: 410 LPNT-----DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 543 VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
A ++ ++H L+ L ++ V L D Y K G L + +F +P + + WN ++
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 603 S 603
+
Sbjct: 525 A 525
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 222/521 (42%), Gaps = 60/521 (11%)
Query: 28 FIASTRVHANSNYVSMSIRSLPYPKF-------MDAQLNQLCSNGPLSDAVAILDSLAEQ 80
++A++ +H S Y ++ + + + +A ++ C +G +A+ + + L
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 81 GSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLS 137
S +T ++LL +C + G +H+ + GL + FV KL+ +Y++ G L
Sbjct: 246 DS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL--FVSNKLIDLYAEFGRLR 299
Query: 138 EARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
+ +KVFD M R+L +W+++I A + + LF +M PD L +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 198 KCGDLETGRLIHSVAIRHG-MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
+ GD+ R + +R G I + N+++ +YAK G + A+ +F + D ++WN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEG-VEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
II+G+ QNG +A + ++ M+EEG + TW ++ + +Q G + L ++
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 316 FGLTPDVYT-------------------------------WSSMISGFTQKGRTYHALDL 344
GL DV+ W+++I+ G A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 345 LRKMLLSGVEPNSIT-VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
++ML GV+P+ IT V + + + ++DMY
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 404 KCGDLEAAQR-IFDMMYERDVYSWNTIIGG-YCHAGF-CGK-AYELFMKMQDSDSPPNVV 459
+ G LE A + I M + D W ++ H GK A E +++ P V
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE-----PEHV 654
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
++ L++ S + + +D + I GK R W+S+
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAH-GKGLRKTPGWSSM 694
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 210/439 (47%), Gaps = 41/439 (9%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+ L C D + R++H + G + + FV +++ Y+KC ++ ARKVFDEM E
Sbjct: 136 LKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE 195
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEFLLPKILQACGKCGDLETGRL 207
R++ +W++MI S+ S+E+ ++ M+ F P+ + + QACG+ DL G
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
+H I + + + + N+++ YAKCG + +A+ LF M E+DSVT+ AII+G+ +G
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGL 315
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+++A F M+ GL TWN +I+ Q + ++ R+M G P+ T SS
Sbjct: 316 VKEAMALFSEME----SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
++ T L G + EIH ++
Sbjct: 372 LLPSLTYSSN------------LKGGK-----------------------EIHAFAIRNG 396
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
+++ S+ID Y+K G L AQR+FD +R + +W II Y G A LF
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+MQ + P+ VT A+++ + SG D A +F + I+ V + +++ ++
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 508 GQKDKAMQIFRRMQFFQIA 526
G+ AM+ +M IA
Sbjct: 517 GKLSDAMEFISKMPIDPIA 535
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 218/509 (42%), Gaps = 123/509 (24%)
Query: 107 ELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
+LHARI +V ++ P F+ +KL+S Y++ +A VFDE+ RN F+++A++ A +
Sbjct: 43 QLHARI-VVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 165 KSWEEVVDLFYDMV------RHGFLPDEFLLPKILQACGKCGDLETG---RLIHSVAIRH 215
+ + + LF + PD + +L+A C D G R +H IR
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF 275
G S + V N ++ Y KC +IE ARK F
Sbjct: 162 GFDSDVFVGNGMITYYTKCD-------------------------------NIESARKVF 190
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
D M E DV +W+SMISG++Q
Sbjct: 191 DEMSER---------------------------------------DVVSWNSMISGYSQS 211
Query: 336 GRTYHALDLLRKMLL-SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G + + ML S +PN +TV E+H ++ + D+
Sbjct: 212 GSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
N++I Y+KCG L+ A+ LF +M + DS
Sbjct: 272 CNAVIGFYAKCGSLDYAR-------------------------------ALFDEMSEKDS 300
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
VT+ A+I+GYM G +A+ LF +E G +++WN++I+G +Q+ ++ +
Sbjct: 301 ----VTYGAIISGYMAHGLVKEAMALFSEMESIG-----LSTWNAMISGLMQNNHHEEVI 351
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
FR M PN+VT+ S+LP+ K KEIH A+R + I V+ +ID+Y
Sbjct: 352 NSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNY 411
Query: 575 AKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
AK G L+ ++R+FD + +I+W +++
Sbjct: 412 AKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---R 111
+A ++ L N + + + GS+ +T +LL S ++ G+E+HA R
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G N+ +V T ++ Y+K G L A++VFD ++R+L W+A+I A + +
Sbjct: 395 NGADNNI--YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI-HSVAIRHGMCSSIRVNNSIMAV 230
LF M G PD+ L +L A GD + + I S+ ++ + + +++V
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 231 YAKCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP-GLV 288
++ G++ A + M + + W A++ G GD+E AR D + E +EP
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFE--MEPENTG 570
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGL 318
+ I+ Y Q GR + A + KM+ GL
Sbjct: 571 NYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 256/569 (44%), Gaps = 82/569 (14%)
Query: 106 RELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMR-ERNLFTWSAMIGACSR 163
R +HA + +G + + F KL+ YS + + VF + +N++ W+++I A S+
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+ E ++ + + PD++ P +++AC D E G L++ + G S + V
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N+++ +Y++ G + A+++F M RD V+WN++I+G+ +G E+A + + ++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL------------------------- 318
P T + ++ ++ L + V + + F L
Sbjct: 204 VPDSFTVSSVLPAFGNL----LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 319 ----------TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
D ++++MI G+ + ++ + + L +P+ +TV
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACG 318
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
I+ +K V + N LID+Y+KCGD+ A+ +F+ M +D SWN+
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW--------------------------- 461
II GY +G +A +LF M + + +T+
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 462 --------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
NALI Y + G +L +F + + +WN++I+ ++ G
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-----DTVTWNTVISACVRFGDFATG 493
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
+Q+ +M+ ++ P+ T L LP A+L A + KEIHCC LR SE+ + N LI+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 574 YAKSGNLMYSRRIFDGLPLKDIISWNIML 602
Y+K G L S R+F+ + +D+++W M+
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 144/547 (26%), Positives = 252/547 (46%), Gaps = 83/547 (15%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNP 120
NG +A+ L E SKV P T+ +++++C E+G ++ +I +G +
Sbjct: 84 NGLFPEALEFYGKLRE--SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
FV LV MYS+ G L+ AR+VFDEM R+L +W+++I S +EE +++++++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS 201
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
+PD F + +L A G ++ G+ +H A++ G+ S + VNN ++A+Y K A
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 241 KKLFKSMDERDSVTWNAIITG-------------FCQN---------------------G 266
+++F MD RDSV++N +I G F +N
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLR 321
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
D+ A+ ++ M + G NILI Y + G A D+ ME D +W+
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME----CKDTVSWN 377
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
S+ISG+ Q G A+ L + M++ + + IT +H G+K
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
+ D+ N+LIDMY+KCG++ + +IF M D +WNT+I G ++
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 447 MKMQDSDSPPNVVTW-----------------------------------NALITGYMQS 471
+M+ S+ P++ T+ NALI Y +
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G + + +F+R+ +R+V +W +I + G+ +KA++ F M+ I P+SV
Sbjct: 558 GCLENSSRVFERMS-----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 532 VLSILPA 538
++I+ A
Sbjct: 613 FIAIIYA 619
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 212/445 (47%), Gaps = 37/445 (8%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
LV+MY K ++AR+VFDEM R+ +++ MI + + EE V +F + + F PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
+ +L+ACG DL + I++ ++ G V N ++ VYAKCG+M A+ +F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG---- 301
SM+ +D+V+WN+II+G+ Q+GD+ +A K F M + +T+ +LI+ +L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 302 ----------------------------RCDIAVDLMRKMESFGLTPDVYTWSSMISGFT 333
+C D ++ S G T D TW+++IS
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACV 485
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
+ G L + +M S V P+ T EIH ++ ++
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
GN+LI+MYSKCG LE + R+F+ M RDV +W +I Y G KA E F M+ S
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
P+ V + A+I SG D+ L F++++ KI + + ++ +S + KA
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPA 538
+ + M I P++ S+L A
Sbjct: 666 EEFIQAM---PIKPDASIWASVLRA 687
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 204/480 (42%), Gaps = 71/480 (14%)
Query: 190 PKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE 249
P I +A +L R IH++ I G+ SS + ++ Y+ E + +F+ +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 250 RDSV-TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS------------ 296
+V WN+II F +NG +A +++ ++E V P T+ +I +
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 297 -YNQLGRCDIAVDLM----------------RKMESFGLTP--DVYTWSSMISGFTQKGR 337
Y Q+ DL R + F P D+ +W+S+ISG++ G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
AL++ ++ S + P+S TV +HG +K + V+ N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP- 456
L+ MY K A+R+FD M RD S+NT+I GY ++ +F++ D P
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 457 ---------------------------------NVVTWNALITGYMQSGAEDQALDLFKR 483
N LI Y + G A D+F
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
+E ++ SWNS+I+G++QSG +AM++F+ M + + +T L ++ L
Sbjct: 368 MEC-----KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K K +H ++ + ++SVSN LID YAK G + S +IF + D ++WN ++S
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNP 120
+G L +A+ + + + ITY+ L+ ++ G+ LH+ + G+ +++
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS- 444
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V L+ MY+KCG + ++ K+F M + TW+ +I AC R + + + M +
Sbjct: 445 -VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
+PD L C G+ IH +R G S +++ N+++ +Y+KCG + +
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
++F+ M RD VTW +I + G+ E+A + F M++ G+ P V + +I + +
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 301 GRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
G D + KM++ + + P + ++ ++ ++ + A + ++ M
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 229/527 (43%), Gaps = 73/527 (13%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG- 116
L++ + LS AV+ L+SL +QG ++ +LLQ C D ++ G+ +H + + G
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 117 -NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI------GACSREK---- 165
N + L+ MY KCG +A KVFD+M RNL++W+ M+ G R +
Sbjct: 78 KRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFD 137
Query: 166 --------SW-------------EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
SW E + + + R G +EF +L AC K L+
Sbjct: 138 SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL 197
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
R H + G S++ ++ SI+ YAKCG+M AK+ F M +D W +I+G+ +
Sbjct: 198 NRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAK 257
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
GD+E A K F M E+ V+W LIA Y + G + A+DL RKM + G+ P+ +T
Sbjct: 258 LGDMEAAEKLFCEMPEKNP----VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+SS + H ++ M+ + V PN+I +
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI------------------------ 349
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGYCHAGFCGKAY 443
+SLIDMYSK G LEA++R+F + ++ D WNT+I G KA
Sbjct: 350 -----------SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
+ M PN T ++ SG ++ L F+ + I + + LI
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
++G + M+ M F +L + N GKK +
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 201/463 (43%), Gaps = 89/463 (19%)
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
R+R + + + + + + V + + G LL +LQ CG L+ G+
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 207 LIHSVAIRHGMCSSIR-----VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
IH RH + + ++N ++ +Y KCG+ A K+F M R+ +WN +++G
Sbjct: 67 WIH----RHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSG 122
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+ ++G + +AR FD+M E D
Sbjct: 123 YVKSGMLVRARVVFDSMPER---------------------------------------D 143
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V +W++M+ G+ Q G + AL ++ SG++ N + + HG
Sbjct: 144 VVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHG 203
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ + +V+ S+ID Y+KCG +E+A+R FD M +D++ W T+I GY G
Sbjct: 204 QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEA 263
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A +LF +M + N V+W ALI GY++ G+ ++ALDL
Sbjct: 264 AEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDL--------------------- 298
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
FR+M + P T S L A A++ + + KEIH +R N+
Sbjct: 299 ---------------FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR 343
Query: 562 SEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
V + LID Y+KSG+L S R+F K D + WN M+S
Sbjct: 344 PNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP--F 121
G + A+ + + G K T+ + L + + G+E+H + + NV P
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAI 347
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRER-NLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V + L+ MYSK G L + +VF ++ + W+ MI A ++ + + + DM++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 181 GFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P+ L IL AC G +E G R S+ ++HG+ ++ + G G
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLL---GRAGC 464
Query: 240 AKKLFKSMDER----DSVTWNAIITGFCQ-NGDIEQARKYFDAM 278
K+L + ++E D WNAI+ G C+ +G+ E +K D +
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAIL-GVCRIHGNEELGKKAADEL 507
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/623 (24%), Positives = 271/623 (43%), Gaps = 87/623 (13%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI-- 112
+ QL + C +G L +AV +L + P T ++LQ C D ++ G+E+ I
Sbjct: 65 NTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 113 -GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G V + N + +KL MY+ CG L EA +VFDE++ W+ ++ ++ + +
Sbjct: 123 NGFVIDSN--LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
LF M+ G D + + ++ + G +H ++ G V NS++A Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT-- 289
K + A+K+F M ERD ++WN+II G+ NG E+ F M G+E L T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 290 ---------------------------------WNILIASYNQLGRCDIAVDLMRKMESF 316
N L+ Y++ G D A + R+M
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD- 359
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
V +++SMI+G+ ++G A+ L +M G+ P+ TV
Sbjct: 360 ---RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
+H + L D+ N+L+DMY+KCG ++ A+ +F M +D+ SWNTIIGGY
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 437 GFCGKAYELF-MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI----- 490
+ +A LF + +++ P+ T ++ A D+ ++ I ++G
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 491 -------------------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
+++ SW +IAG+ G +A+ +F +M+ I
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 526 APNSVTVLSILPAFAN---LVAGKKVKEIHCCALRRNLVSEISVSN--ILIDSYAKSGNL 580
+ ++ +S+L A ++ + G + I +R E +V + ++D A++G+L
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFFNI----MRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 581 MYSRRIFDGLPL-KDIISWNIML 602
+ + R + +P+ D W +L
Sbjct: 653 IKAYRFIENMPIPPDATIWGALL 675
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 222/486 (45%), Gaps = 72/486 (14%)
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
D L +LQ C L+ G+ + + +G + + + +Y CG++ A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY------- 297
+ ++ WN ++ ++GD + F M GVE T++ + S+
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 298 -----------------NQLGRCDIA-------VDLMRKMESFGLTPDVYTWSSMISGFT 333
N +G +A VD RK+ DV +W+S+I+G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
G L + +ML+SG+E + T+ +H IGVK +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
N+L+DMYSKCGDL++A+ +F M +R V S+ ++I GY G G+A +LF +M++
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 454 SPPNVVT----------------------W-------------NALITGYMQSGAEDQAL 478
P+V T W NAL+ Y + G+ +A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILP 537
+F + +++ SWN++I G+ ++ ++A+ +F + + + +P+ TV +LP
Sbjct: 453 LVFSEMRV-----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A A+L A K +EIH +R S+ V+N L+D YAK G L+ + +FD + KD++S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 598 WNIMLS 603
W +M++
Sbjct: 568 WTVMIA 573
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 229/516 (44%), Gaps = 46/516 (8%)
Query: 53 FMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI 112
F + +N+L +G S ++ + + G ++ T+ + +S + G +LH I
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 113 --GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEV 170
G N V LV+ Y K + ARKVFDEM ER++ +W+++I E+
Sbjct: 222 LKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ +F M+ G D + + C + GR +HS+ ++ R N+++ +
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT- 289
Y+KCG++ AK +F+ M +R V++ ++I G+ + G +A K F+ M+EEG+ P + T
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 290 ---------------------W-------------NILIASYNQLGRCDIAVDLMRKMES 315
W N L+ Y + G A + +M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR- 459
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXX 374
D+ +W+++I G+++ AL L +L P+ TV
Sbjct: 460 ---VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC 434
EIHG ++ D NSL+DMY+KCG L A +FD + +D+ SW +I GY
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
GF +A LF +M+ + + +++ +L+ SG D+ F + + KI+ V
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
+ ++ ++G KA +R ++ I P++
Sbjct: 637 EHYACIVDMLARTGDLIKA---YRFIENMPIPPDAT 669
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 203/481 (42%), Gaps = 48/481 (9%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL--- 114
+N SNG +++ + G ++ T +++ C D I +GR +H+ IG+
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS-IGVKAC 326
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ F T L+ MYSKCG L A+ VF EM +R++ ++++MI +RE E V LF
Sbjct: 327 FSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
+M G PD + + +L C + L+ G+ +H + + I V+N++M +YAKC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-----------V 283
G M A+ +F M +D ++WN II G+ +N +A F+ + EE V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 284 EPGLVTW-------------------------NILIASYNQLGRCDIAVDLMRKMESFGL 318
P + N L+ Y + G +A L + S
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS--- 562
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
D+ +W+ MI+G+ G A+ L +M +G+E + I+
Sbjct: 563 -KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 379 IHGIGVKMSLVDDVLTGNS-LIDMYSKCGDLEAAQR-IFDMMYERDVYSWNTIIGGYCHA 436
I ++ + + ++DM ++ GDL A R I +M D W ++ G C
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG-CRI 680
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
K E + P N + + Y ++ +Q L KRI + G K S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 497 W 497
W
Sbjct: 741 W 741
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 237/523 (45%), Gaps = 83/523 (15%)
Query: 90 MNLLQSCIDR-DCIEVGRELHARIGLVGNVNPFVETK-LVSMYSKCGHLSEARKVFDEMR 147
++LL+ C + + + +H RI +G V K L+++Y C AR VF+
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 148 ER-NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF-LPDEFLLPKILQACGKCGDLETG 205
R +++ W++++ S+ + + +++F ++ +PD F P +++A G G G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
R+IH++ ++ G + V +S++ +YAK + ++F M ERD +WN +I+ F Q+
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL------------------------- 300
G+ E+A + F M+ G EP V+ + I++ ++L
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 301 -------GRCD---IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
G+CD +A ++ +KM L W+SMI G+ KG + +++L +M++
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLV----AWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
G P+ T+ IHG ++ + D+ SLID+Y KCG+
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW--------- 461
A+ +F + SWN +I Y G KA E++ +M P+VVT+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 462 --------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
+AL+ Y + G E +A +F I K++V
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-----KKDVV 477
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
SW +I+ + GQ +A+ F MQ F + P+ VT+L++L A
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 210/484 (43%), Gaps = 73/484 (15%)
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
LL + + L +L+H + G+ + + S++ VY C + A+ +F++
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 248 DERDSV-TWNAIITGFCQNGDIEQARKYFDAMQEEGV-EPGLVTWNILIASYNQLGR--- 302
D R V WN++++G+ +N + F + + P T+ +I +Y LGR
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 303 --------------CDIAVD------------LMRKMESFGLTP--DVYTWSSMISGFTQ 334
CD+ V ++ F P DV +W+++IS F Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G AL+L +M SG EPNS+++ EIH VK D
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
++L+DMY KC LE A+ +F M + + +WN++I GY G E+ +M +
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 455 PPNVVTWNA-----------------------------------LITGYMQSGAEDQALD 479
P+ T + LI Y + G + A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 480 LFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAF 539
+F + +KD SWN +I+ ++ G KA++++ +M + P+ VT S+LPA
Sbjct: 366 VFSKTQKD-----VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 540 ANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
+ L A +K K+IH L ++ + + L+D Y+K GN + RIF+ +P KD++SW
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 600 IMLS 603
+M+S
Sbjct: 481 VMIS 484
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 211/448 (47%), Gaps = 32/448 (7%)
Query: 104 VGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS 162
+GR +H + G V + V + LV MY+K + +VFDEM ER++ +W+ +I
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ E+ ++LF M GF P+ L + AC + LE G+ IH ++ G
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
VN++++ +Y KC + A+++F+ M + V WN++I G+ GD + + + M EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 283 VEPGLVTW-NILIA---SYNQLG-------------RCDIAV-----DLMRKMESFGLTP 320
P T +IL+A S N L DI V DL K L
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 321 DVY---------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
V+ +W+ MIS + G + A+++ +M+ GV+P+ +T
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIG 431
+IH + L D L ++L+DMYSKCG+ + A RIF+ + ++DV SW +I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
Y G +A F +MQ P+ VT A+++ +G D+ L F ++ I+
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRR 519
+ ++ +I ++G+ +A +I ++
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 37/328 (11%)
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML-LSGVEPNSITVXXXXXXXXXXX 371
E+F + DVY W+S++SG+++ + L++ +++L S P+S T
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIG 431
IH + VK V DV+ +SL+ MY+K E + ++FD M ERDV SWNT+I
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG-----YMQSGAEDQALDLFKRIEK 486
+ +G KA ELF +M+ S PN V+ I+ +++ G E + K E
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 487 DGKI-------------------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
D + ++++ +WNS+I G++ G ++I RM
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 522 FFQIAPNSVTVLSILPAFA---NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
P+ T+ SIL A + NL+ GK IH +R + ++I V+ LID Y K G
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKF---IHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 579 NLMYSRRIFDGLPLKDIISWNIMLSQEI 606
+ +F SWN+M+S I
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYI 386
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 32/329 (9%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
+G A+ + + G + ++ + +C +E G+E+H + G ++ +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ LV MY KC L AR+VF +M ++L W++MI + + V++ M+ G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
P + L IL AC + +L G+ IH IR + + I VN S++ +Y KCGE A+
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
+F + + +WN +I+ + G+ +A + +D M GV+P +VT+ ++ + +QL
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 303 CDIA----------------------VDLMRKM----ESFGL-----TPDVYTWSSMISG 331
+ +D+ K E+F + DV +W+ MIS
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITV 360
+ G+ AL +M G++P+ +T+
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTL 514
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
S G AV + D + G K +T+ ++L +C +E G+++H I +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
+ + L+ MYSKCG+ EA ++F+ + ++++ +W+ MI A E + F +M + G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 182 FLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD L +L ACG G ++ G + + ++G+ I + ++ + + G + A
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 241 KKLFKSMDE 249
++ + E
Sbjct: 567 YEIIQQTPE 575
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 233/500 (46%), Gaps = 52/500 (10%)
Query: 7 ILPTKSRPPLSIPSYSASQFE----FIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLC 62
I P+++R P + P+ F F +S +H+ + PY D Q+
Sbjct: 40 IRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKN----------PYIIHRDIQIFARQ 89
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
+N L A+ ILD L ++G V T+ LL++C+ R + G+++H I + G N F
Sbjct: 90 NN--LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGAC--SREKSWEEVVDLFYDMVR 179
+ TKLV MY+ CG + +A+KVFDE N+++W+A++ S +K +++V+ F +M
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G + + L + ++ L G H++AI++G+ +S+ + S++ +Y KCG++G
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM-QEEGVEPGLVTWNILIASYN 298
A+++F + ERD V W A+I G N +A F M EE + P V ++
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 299 QLGRCDIAVDL---MRKMESFGLTP-------DVY----------------------TWS 326
+ + ++ + K +++ P D+Y +W+
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWT 387
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
+++SG+ GR AL + M G P+ +T+ EIH +K
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN 447
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
+ +V SL+ MYSKCG E R+FD + +R+V +W +I Y E+F
Sbjct: 448 LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 447 MKMQDSDSPPNVVTWNALIT 466
M S P+ VT ++T
Sbjct: 508 RLMLLSKHRPDSVTMGRVLT 527
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 198/453 (43%), Gaps = 46/453 (10%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETK 125
D ++ + E G + + N+ +S + G + HA + GL +V F++T
Sbjct: 197 DVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV--FLKTS 254
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV-RHGFLP 184
LV MY KCG + AR+VFDE+ ER++ W AMI + K E + LF M+ P
Sbjct: 255 LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP 314
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
+ +L IL G L+ G+ +H+ ++ V++ ++ +Y KCG+M +++
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI----------- 292
F +R++++W A+++G+ NG +QA + MQ+EG P +VT
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 293 ------------------------LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
L+ Y++ G + + L ++E +V W++M
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ----RNVKAWTAM 490
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
I + + +++ R MLLS P+S+T+ E+HG +K
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+I MY KCGDL +A FD + + +W II Y A F +
Sbjct: 551 ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQ 610
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
M PN T+ A+++ Q+G D+A F
Sbjct: 611 MVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 235/557 (42%), Gaps = 77/557 (13%)
Query: 98 DRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFT 153
+RD LH++ NP++ + + ++++ +L A + D + +R N T
Sbjct: 61 ERDAFPSSLPLHSK-------NPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATT 113
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ---ACGKCGDLE------T 204
+SA++ AC R KS + + +G +EFL K++ ACG D + T
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 205 GRLIHS--VAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
++S +R + S + +++ + + E+G ++ + + + F
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVY---------SLSNVFKSF 224
Query: 263 CQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDV 322
+ Q K + G+ + L+ Y + G+ V L R++ + D+
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK----VGLARRVFDEIVERDI 280
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLS-GVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
W +MI+G R + AL L R M+ + PNS+ + E+H
Sbjct: 281 VVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHA 340
Query: 382 IGVK-MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+K + V+ + LID+Y KCGD+ + +R+F +R+ SW ++ GY G
Sbjct: 341 HVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFD 400
Query: 441 KAYELFMKMQDSDSPPNVVTW-----------------------------------NALI 465
+A + MQ P+VVT +L+
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLM 460
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
Y + G + + LF R+E+ RNV +W ++I ++++ +++FR M +
Sbjct: 461 VMYSKCGVPEYPIRLFDRLEQ-----RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
P+SVT+ +L ++L A K KE+H L++ S VS +I Y K G+L +
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 586 IFDGLPLKDIISWNIML 602
FD + +K ++W ++
Sbjct: 576 SFDAVAVKGSLTWTAII 592
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 154/354 (43%), Gaps = 34/354 (9%)
Query: 98 DRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWS 155
D +++G+E+HA + N PFV + L+ +Y KCG ++ R+VF ++RN +W+
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWT 387
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
A++ + +++ + M + GF PD + +L C + ++ G+ IH A+++
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN 447
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF 275
++ + S+M +Y+KCG + +LF +++R+ W A+I + +N D+ + F
Sbjct: 448 LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL----------------MRKMESFGLT 319
M P VT ++ + L + +L R ++ +G
Sbjct: 508 RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKC 567
Query: 320 PDV---------------YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
D+ TW+++I + A++ +M+ G PN+ T
Sbjct: 568 GDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVL 627
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL-IDMYSKCGDLEAAQRIFDM 417
+ ++M + SL I++ ++CG +E AQR+ M
Sbjct: 628 SICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVM 681
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 43/266 (16%)
Query: 379 IHGIGVKMSLVDDVLTGNS-----LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
+HG V + + + L N L+ MY+ CG ++ AQ++FD +VYSWN ++ G
Sbjct: 128 LHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGT 187
Query: 434 CHAGFCGKAYE----LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQAL----------- 478
+G K Y+ F +M++ NV + + + + + A Q L
Sbjct: 188 VISG--KKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 479 -----------DLFKRIEK--------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
D++ + K D ++R++ W ++IAG + ++ +A+ +FR
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 520 M-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR-RNLVSEISVSNILIDSYAKS 577
M +I PNSV + +ILP ++ A K KE+H L+ +N V + V + LID Y K
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 578 GNLMYSRRIFDGLPLKDIISWNIMLS 603
G++ RR+F G ++ ISW ++S
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMS 391
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVN--PFVETKLVSMYSKCGHLS 137
SK RP +T +L C D +++G+ELH I L PFV +++ MY KCG L
Sbjct: 513 SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI-LKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 138 EARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
A FD + + TW+A+I A + + + ++ F MV GF P+ F +L C
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 198 KCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
+ G ++ ++ +R + + S + ++ + +CG + A++L
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 399 IDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG------FCGKAYELFMKMQDS 452
I ++++ +LE A I D + +R + T A GK + +++
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK-- 510
+S N L+ Y G+ A +F D NV SWN+L+ G + SG+K
Sbjct: 143 ES--NEFLRTKLVHMYTACGSVKDAQKVF-----DESTSSNVYSWNALLRGTVISGKKRY 195
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
+ F M+ + N ++ ++ +FA A ++ + H A++ L + + + L
Sbjct: 196 QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL 255
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+D Y K G + +RR+FD + +DI+ W M++
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 261/555 (47%), Gaps = 52/555 (9%)
Query: 5 LIILPTKSRPPLSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYP-KFMDAQL---NQ 60
L++ R PL + + I S + + + + PYP FM L N
Sbjct: 24 LLVTGRLRRDPLPVT-------KLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV 76
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCI-DRDCIEVGRELHARIGLVGNVN 119
C L A+ + L + +++ + ++L++C R+ + VG ++H RI + G V+
Sbjct: 77 WCH--LLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRI-IKGGVD 133
Query: 120 --PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
+ET L+ MY + G+LS+A KVFD M R+L WS ++ +C + + +F M
Sbjct: 134 DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
V G PD + +++ C + G L R +H R + NS++ +Y+KCG++
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
++++F+ + ++++V+W A+I+ + + E+A + F M + G+EP LVT +++S
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC 313
Query: 298 NQLGRCD---------IAVDLMRKMESFGLT-----------------------PDVYTW 325
+G + +L ES L ++ W
Sbjct: 314 GLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAW 373
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
+S+IS + +G AL L R+M+ ++P++ T+ +IHG ++
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
+ D+ + NSLIDMYSK G +++A +F+ + R V +WN+++ G+ G +A L
Sbjct: 434 TDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F M S N VT+ A+I G+ ++ + ++ G +++ + +LI +
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG--LKDLFTDTALIDMYA 550
Query: 506 QSGQKDKAMQIFRRM 520
+ G + A +FR M
Sbjct: 551 KCGDLNAAETVFRAM 565
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 256/571 (44%), Gaps = 78/571 (13%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDEM 146
YM L +SC + + +LHA + + G + +P TKL+ Y+ G +R VF+
Sbjct: 4 YMPLFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC-GKCGDLETG 205
+ F + +I + +DL++ +V +F+ P +L+AC G L G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+H I+ G+ + S++ +Y + G + A+K+F M RD V W+ +++ +N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV----DLMRKMESFGLT-- 319
G++ +A + F M ++GVEP VT ++ +LG IA + RKM T
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 320 -------------------------PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+ +W++MIS + + + AL +M+ SG+E
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN-SLIDMYSKCGDLEAAQR 413
PN +T+ +HG V+ L + + + +L+++Y++CG L +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------ 461
+ ++ +R++ +WN++I Y H G +A LF +M P+ T
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 462 ----------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
N+LI Y +SG+ D A +F +I+ R+V +WNS
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH-----RSVVTWNS 475
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
++ GF Q+G +A+ +F M + N VT L+++ A +++ + +K K +H +
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
L ++ LID YAK G+L + +F +
Sbjct: 536 L-KDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 242/499 (48%), Gaps = 42/499 (8%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL-VGNVNPFV 122
NG + A+ + + + G + +T +++++ C + C+ + R +H +I + +++ +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
L++MYSKCG L + ++F+++ ++N +W+AMI + +R + E+ + F +M++ G
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR-VNNSIMAVYAKCGEMGFAK 241
P+ L +L +CG G + G+ +H A+R + + ++ +++ +YA+CG++ +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP---------------G 286
+ + + +R+ V WN++I+ + G + QA F M + ++P G
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 287 LV-------------------TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
LV N LI Y++ G D A + +++ V TW+S
Sbjct: 420 LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH----RSVVTWNS 475
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
M+ GF+Q G + A+ L M S +E N +T +H + +S
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH-KLIIS 534
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
+ D+ T +LIDMY+KCGDL AA+ +F M R + SW+++I Y G G A F
Sbjct: 535 GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M +S + PN V + +++ SG+ ++ F ++ G + N + I +S
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG-VSPNSEHFACFIDLLSRS 653
Query: 508 GQKDKAMQIFRRMQFFQIA 526
G +A + + M F A
Sbjct: 654 GDLKEAYRTIKEMPFLADA 672
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
++ L NG +A+++ D + ++ +T++ ++Q+C +E G+ +H ++ +
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLII 533
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
G + F +T L+ MY+KCG L+ A VF M R++ +WS+MI A + F
Sbjct: 534 SGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
MV G P+E + +L ACG G +E G+ ++ G+ + + + ++
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRS 653
Query: 235 GEMGFAKKLFKSMD-ERDSVTWNAIITG--FCQNGDIEQARK 273
G++ A + K M D+ W +++ G Q DI +A K
Sbjct: 654 GDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
H GK + +K D + V +L+ Y Q+G A +F DG R++
Sbjct: 116 HLSVGGKVHGRIIKGGVDD---DAVIETSLLCMYGQTGNLSDAEKVF-----DGMPVRDL 167
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
+W++L++ L++G+ KA+++F+ M + P++VT++S++ A L + + +H
Sbjct: 168 VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
R+ + ++ N L+ Y+K G+L+ S RIF+ + K+ +SW M+S
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 229/492 (46%), Gaps = 22/492 (4%)
Query: 41 VSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDR- 99
+++ + L +PKF Q ++ S+ P + LD + Q + + LL +D
Sbjct: 4 INVDLHLLHFPKFRKFQSRKVSSSLPKLE----LDQKSPQET-------VFLLGQVLDTY 52
Query: 100 DCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI 158
I R +H+RI L N + KL+ Y+ ++ ARKVFDE+ ERN+ + MI
Sbjct: 53 PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ + E V +F M PD + P +L+AC G + GR IH A + G+
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
S++ V N ++++Y KCG + A+ + M RD V+WN+++ G+ QN + A + M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDI--AVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
+ + T L+ + + ++ D+ KM L +W+ MI + +
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV----SWNVMIGVYMKNA 288
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
A++L +M G EP+++++ +IHG + L+ ++L N
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
+LIDMY+KCG LE A+ +F+ M RDV SW +I Y +G A LF K+QDS P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ + + + +G ++ FK + KI + ++ G+ K +
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL---GRAGKVKEA 465
Query: 517 FRRMQFFQIAPN 528
+R +Q + PN
Sbjct: 466 YRFIQDMSMEPN 477
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 156/339 (46%), Gaps = 46/339 (13%)
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
D+ ARK FD + E V + N++I SY G V + M + PD YT+
Sbjct: 89 DVASARKVFDEIPERNV----IIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
++ + G + + RK IHG K+
Sbjct: 145 CVLKACSCSG----TIVIGRK-------------------------------IHGSATKV 169
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
L + GN L+ MY KCG L A+ + D M RDV SWN+++ GY A E+
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAED--QALDLFKRIEKDGKIKRNVASWNSLIAGF 504
+M+ + T +L+ + E+ D+F ++ K +++ SWN +I +
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK-----KSLVSWNVMIGVY 284
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
+++ +A++++ RM+ P++V++ S+LPA + A K+IH R+ L+ +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ N LID YAK G L +R +F+ + +D++SW M+S
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 244/564 (43%), Gaps = 93/564 (16%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
N FV +KL+S Y+ G + + +VF + R++F W+++I A + + F+ M+
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG-MCSSIRVNNSIMAVYAKCGEM 237
G PD F P ++ AC + G +H + ++HG + V S + Y+KCG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG--------------- 282
A +F M +RD V W AII+G QNG+ E Y M G
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 283 -------------------VEPGLVTWNILIAS----YNQLGRCDIAVDLMRKMESFGLT 319
V+ GL + + +S Y++ G A R++
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD---- 293
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
D+++W+S+I+ + G + D+ +M G+ P+ + +
Sbjct: 294 EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGY----C 434
HG ++ D NSL+ MY K L A+++F + E + +WNT++ GY C
Sbjct: 354 HGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKC 413
Query: 435 HAGFCGKAYELFMKMQ------DSDSPPNVVT---------------------------- 460
H K ELF K+Q DS S +V++
Sbjct: 414 HV----KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTIS 469
Query: 461 -WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
N+LI Y + G A +F E D NV +WN++IA ++ Q +KA+ +F R
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMF--CEAD----TNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
M P+S+T++++L A N + ++ + IH +S+S LID YAK G+
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 580 LMYSRRIFDGLPLKDIISWNIMLS 603
L SR +FD KD + WN+M+S
Sbjct: 584 LEKSRELFDAGNQKDAVCWNVMIS 607
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/616 (25%), Positives = 265/616 (43%), Gaps = 83/616 (13%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV--NP 120
SNG + ++ S+ G T ++ +C + VG +H + G N
Sbjct: 102 SNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNT 161
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V V YSKCG L +A VFDEM +R++ W+A+I + E + M
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSA 221
Query: 181 GF---LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
G P+ L QAC G L+ GR +H A+++G+ SS V +S+ + Y+K G
Sbjct: 222 GSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNP 281
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
A F+ + + D +W +II ++GD+E++ F MQ +G+ P V + LI
Sbjct: 282 SEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI--- 338
Query: 298 NQLGR-------------------------CDIAVDLMRKMESFGLTPDVY--------- 323
N+LG+ C+ + + K E + ++
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 324 -TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
W++M+ G+ + ++L RK+ G+E +S + +H
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
VK SL + NSLID+Y K GDL A R+F + +V +WN +I Y H KA
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKA 517
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA----------------------LDL 480
LF +M + P+ +T L+ + +G+ ++ +D+
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 481 FKR---IEK-----DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
+ + +EK D +++ WN +I+G+ G + A+ +F +M+ + P T
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 533 LSILPA--FANLV-AGKKV-KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
L++L A A LV GKK+ ++H ++ NL + L+D ++SGNL +
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKH----YSCLVDLLSRSGNLEEAESTVM 693
Query: 589 GLPLK-DIISWNIMLS 603
+P D + W +LS
Sbjct: 694 SMPFSPDGVIWGTLLS 709
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 239/531 (45%), Gaps = 54/531 (10%)
Query: 64 NGPLSDAVAILDSLAEQGSKV---RPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGN 117
NG + L + GS V P T Q+C + ++ GR LH + GL +
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
FV++ + S YSK G+ SEA F E+ + ++F+W+++I + +R EE D+F++M
Sbjct: 265 --KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
G PD ++ ++ GK + G+ H IRH V NS++++Y K +
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELL 382
Query: 238 GFAKKLF-KSMDERDSVTWNAIITGF----CQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
A+KLF + +E + WN ++ G+ C IE RK +Q G+E +
Sbjct: 383 SVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK----IQNLGIEIDSASATS 438
Query: 293 LIASYNQLG--------RCDIA--------------VDLMRKMESFGLT--------PDV 322
+I+S + +G C + +DL KM + +V
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNV 498
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
TW++MI+ + ++ A+ L +M+ +P+SIT+ IH
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
+ ++ +LIDMY+KCG LE ++ +FD ++D WN +I GY G A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
LF +M++SD P T+ AL++ +G +Q LF ++ + +K N+ ++ L+
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY-DVKPNLKHYSCLVD 677
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKE 550
+SG ++A M F +P+ V T+LS G ++ E
Sbjct: 678 LLSRSGNLEEAESTVMSMPF---SPDGVIWGTLLSSCMTHGEFEMGIRMAE 725
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 49/379 (12%)
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
Q+ +E RK+ + G+ + + LI+SY G+ +++ + + D++
Sbjct: 36 QSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVT----RRDIF 91
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
W+S+I G +L MLLSG P+ T +HG+
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 384 VKMSLVD-DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
+K D + G S + YSKCG L+ A +FD M +RDV +W II G+ G
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 443 YELFMKMQDSDS---PPNVVTW-----------------------------------NAL 464
KM + S PN T +++
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ Y +SG +A F+ + + ++ SW S+IA +SG +++ +F MQ
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDE-----DMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
+ P+ V + ++ ++ + K H +R + +V N L+ Y K L +
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386
Query: 585 RIFDGLPLK-DIISWNIML 602
++F + + + +WN ML
Sbjct: 387 KLFCRISEEGNKEAWNTML 405
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 248/556 (44%), Gaps = 83/556 (14%)
Query: 53 FMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID-RDCIEVGRELHAR 111
F+ +Q + P + +V+ SL + + +LL C+ + C R++HA+
Sbjct: 23 FLTSQCPYTSISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQC----RQVHAQ 78
Query: 112 IGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRE---RNLFTWSAMIGACSREKS 166
+ L + + + L+S+Y++ G L +AR VF+ + +L W++++ A
Sbjct: 79 VLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGL 138
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS 226
+E ++L+ M + G D ++LP IL+AC G R H+ I+ G+ ++ V N
Sbjct: 139 YENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNE 198
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
++ +Y K G MG A LF M R+ ++WN
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVRNRMSWN------------------------------ 228
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
++I ++Q C+ AV + M+ PD TW+S++S +Q G+ L
Sbjct: 229 -----VMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFH 283
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
M +SG + + ++HG +K + + + N+LI +Y K G
Sbjct: 284 LMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQG 343
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
++ A+ +F + + + SW N+LIT
Sbjct: 344 KVKDAEHLFRQIRNKGIESW-----------------------------------NSLIT 368
Query: 467 GYMQSGAEDQALDLFKRIEKDG---KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
++ +G D+AL LF +E+ +K NV +W S+I G G+ D +++ FR+MQF
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFS 428
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
++ NSVT+ IL A L A +EIH +R ++ I V N L++ YAK G L
Sbjct: 429 KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEG 488
Query: 584 RRIFDGLPLKDIISWN 599
+F+ + KD+ISWN
Sbjct: 489 SLVFEAIRDKDLISWN 504
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 213/455 (46%), Gaps = 18/455 (3%)
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGR-----ELHARIGLVG-NVNPFVETKLVSMYSKC 133
+G + R +T + I R C +GR H ++ +G N V +L+++Y K
Sbjct: 147 RGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKA 206
Query: 134 GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
G + +A +F EM RN +W+ MI S+E E V +F M R F PDE +L
Sbjct: 207 GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVL 266
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL----FKSMDE 249
+CG E + G S +V A+ + A+K+ K E
Sbjct: 267 SCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFE 326
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
+ NA+I + + G ++ A F ++ +G+E +WN LI S+ G+ D A+ L
Sbjct: 327 EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSL 382
Query: 310 MRKMESFG----LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
++E + +V TW+S+I G +GR +L+ R+M S V NS+T+
Sbjct: 383 FSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILS 442
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
EIHG ++ S+ +++L N+L++MY+KCG L +F+ + ++D+ S
Sbjct: 443 ICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
WN+II GY GF KA +F +M S P+ + A+++ +G ++ ++F +
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
K ++ + ++ + G +A +I + M
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 17/300 (5%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRE--------RNLFTWSAMIGACSREKSWEEVVDLFYDM 177
L++ + G L EA +F E+ E N+ TW+++I C+ + ++ ++ F M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
L + + IL C + L GR IH IR M +I V N+++ +YAKCG +
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
+F+++ ++D ++WN+II G+ +G E+A FD M G P + ++++
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 298 NQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+ G + ++ M + FGL P ++ ++ + G A ++++ M + EP
Sbjct: 546 SHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPM---EPK 602
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI--DMYSKCGDLEAAQRI 414
+ V E GI ++S+++ TG+ ++ ++YS G E + +
Sbjct: 603 -VCVLGALLNSCRMHKNVDIAE--GIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANV 659
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 126/311 (40%), Gaps = 37/311 (11%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI+ Y +LG A ++ + S L D+ W+S++ G +AL+L R M G
Sbjct: 95 LISVYARLGLLLDARNVFETV-SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
+ + + H +++ L +++ N L+ +Y K G +
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRM---- 209
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
G AY LF++M N ++WN +I G+ Q
Sbjct: 210 ---------------------------GDAYNLFVEM----PVRNRMSWNVMIKGFSQEY 238
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
+ A+ +F+ ++++ + K + +W S+++ Q G+ + ++ F M+ A + +
Sbjct: 239 DCESAVKIFEWMQRE-EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
A L A +++H ++ + N LI Y K G + + +F +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 593 KDIISWNIMLS 603
K I SWN +++
Sbjct: 358 KGIESWNSLIT 368
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 233/466 (50%), Gaps = 41/466 (8%)
Query: 106 RELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
++LHA+I + N++ + KL+S S C + A +VF++++E N+ +++I A ++
Sbjct: 36 KQLHAQI-IRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQ 94
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+ +F +M R G D F P +L+AC L +++H+ + G+ S I V
Sbjct: 95 NSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 224 NNSIMAVYAKCGEMGF--AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
N+++ Y++CG +G A KLF+ M ERD+V+WN+++ G + G++ AR+ FD M +
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR 214
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-------------------------F 316
L++WN ++ Y + A +L KM F
Sbjct: 215 D----LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 317 GLTP----DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
P +V TW+ +I+G+ +KG A L+ +M+ SG++ ++ V
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
IH I + +L + N+L+DMY+KCG+L+ A +F+ + ++D+ SWNT++ G
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
G +A ELF +M+ P+ VT+ A++ +G D+ +D F +EK +
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
V + L+ + G+ +A+++ + M + PN V ++L A
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGA 493
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 58/417 (13%)
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
LQ KC +L + +H+ IR + + + +++ + C + A ++F + E +
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
N++I QN QA F MQ G+ T+ L+ + + + +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
+E GL+ D+Y +++I +++ G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCG------------------------------------ 166
Query: 373 XXXXXEIHGIGVK--MSLVD-----DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
G+GV+ M L + D ++ NS++ K G+L A+R+FD M +RD+ S
Sbjct: 167 --------GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLIS 218
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
WNT++ GY KA+ELF KM + N V+W+ ++ GY ++G + A +F ++
Sbjct: 219 WNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
K NV +W +IAG+ + G +A ++ +M + ++ V+SIL A
Sbjct: 275 LPAK---NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLL 331
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
IH R NL S V N L+D YAK GNL + +F+ +P KD++SWN ML
Sbjct: 332 SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 83/313 (26%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI++ + + ++AV + +++ P+V+ +S+I Q + Y A + +M G
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFG 112
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
+ ++ T +H K+ L D+ N+LID YS+CG L
Sbjct: 113 LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV-- 170
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
RD A +LF KM + D+ V+WN+++ G +++G
Sbjct: 171 --------RD-------------------AMKLFEKMSERDT----VSWNSMLGGLVKAG 199
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
A LF D +R++ SWN+++ G+ + + KA ++F +M P TV
Sbjct: 200 ELRDARRLF-----DEMPQRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTV 248
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
+++ +V G Y+K+G++ +R +FD +PL
Sbjct: 249 -----SWSTMVMG----------------------------YSKAGDMEMARVMFDKMPL 275
Query: 593 --KDIISWNIMLS 603
K++++W I+++
Sbjct: 276 PAKNVVTWTIIIA 288
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 203/432 (46%), Gaps = 34/432 (7%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+ LL+ CID I + + A + G +KLV KCG + AR+VFD M E
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
R++ TW+++I + + +E V+++ M+ + LPDE+ L + +A + +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 209 HSVAIRHGM-CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
H +A+ G+ S++ V ++++ +Y K G+ AK + ++E+D V A+I G+ Q G+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG-------------------------- 301
+A K F +M E V+P T+ ++ S L
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 302 ------RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
RC + D +R + P+ +W+S+ISG Q GR AL RKM+ ++P
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
NS T+ +IHGI K D G+ LID+Y KCG + A+ +F
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
D + E DV S NT+I Y GF +A +LF +M + PN VT +++ S +
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVE 486
Query: 476 QALDLFKRIEKD 487
+ +LF KD
Sbjct: 487 EGCELFDSFRKD 498
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 183/419 (43%), Gaps = 50/419 (11%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
N FV + LV MY K G EA+ V D + E+++ +A+I S++ E V F M+
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
P+E+ +L +CG D+ G+LIH + ++ G S++ S++ +Y +C +
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP------------- 285
+ ++FK ++ + V+W ++I+G QNG E A F M + ++P
Sbjct: 320 DSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 286 ------------GLVT----------WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
G+VT + LI Y + G D+A + + DV
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV----DVI 435
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
+ ++MI + Q G ALDL +M+ G++PN +TV E+
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 384 VKMSLVDDVLTGNS----LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
K D ++ N ++D+ + G LE A+ + + D+ W T++ C
Sbjct: 496 RK----DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA-CKVHRK 550
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA-SW 497
+ E + P + T + Y +G ++ +++ ++ KD K+K+N A SW
Sbjct: 551 VEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM-KDMKLKKNPAMSW 608
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 41/317 (12%)
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+ TW+S+I+ + R+ A+++ R M+ + V P+ T+ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 382 IGVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+ V + L V +V G++L+DMY K G A+ + D + E+DV +I GY G
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 441 KAYELFMKMQDSDSPPNVVTW-----------------------------------NALI 465
+A + F M PN T+ +L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
T Y++ D +L +FK IE ++ SW SLI+G +Q+G+++ A+ FR+M I
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQV-----SWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
PNS T+ S L +NL ++ ++IH + + + LID Y K G +R
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 586 IFDGLPLKDIISWNIML 602
+FD L D+IS N M+
Sbjct: 425 VFDTLSEVDVISLNTMI 441
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV-E 123
G ++AV S+ + + TY ++L SC + I G+ +H + G + +
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
T L++MY +C + ++ +VF + N +W+++I + E + F M+R
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P+ F L L+ C E GR IH + ++G + ++ +Y KCG A+ +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT-WNILIASYN 298
F ++ E D ++ N +I + QNG +A F+ M G++P VT ++L+A N
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 41/247 (16%)
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
++G+ L+D KCGD++ A+++FD M ER + +WN++I +A E++ M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 453 DSPP------------------------------------NVVTWNALITGYMQSGAEDQ 476
+ P NV +AL+ Y++ G +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
A + R+E+ ++V +LI G+ Q G+ +A++ F+ M ++ PN T S+L
Sbjct: 220 AKLVLDRVEE-----KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 537 PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDII 596
+ NL K IH ++ S ++ L+ Y + + S R+F + + +
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 597 SWNIMLS 603
SW ++S
Sbjct: 335 SWTSLIS 341
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 133/305 (43%), Gaps = 11/305 (3%)
Query: 46 RSLPYPKFMD--AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIE 103
+ + YP + + ++ L NG A+ + K T + L+ C + E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 104 VGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS 162
GR++H + G + + + + L+ +Y KCG AR VFD + E ++ + + MI + +
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ E +DLF M+ G P++ + +L AC +E G + + + +
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND 505
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
++ + + G + A+ L + D V W +++ + +E A + + E
Sbjct: 506 HYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE-- 563
Query: 283 VEPGLVTWNILIAS-YNQLGRCDIAVDLMRKMESFGLTPD-VYTWSSMISGFTQKGRTYH 340
+EPG IL+++ Y G+ + +++ KM+ L + +W + ++ T+
Sbjct: 564 IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEI----NKETHTFM 619
Query: 341 ALDLL 345
A DL
Sbjct: 620 AGDLF 624
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 236/509 (46%), Gaps = 60/509 (11%)
Query: 76 SLAEQGSKVRPITYMNLLQSCIDRD-------CIEVG--RELHARIGLVGNVNP-FVETK 125
S+ Q K +P + + ++RD CI V R++ A++ L P F+ K
Sbjct: 15 SIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPK 74
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI-GACSREKSWEEVVDLFYDMVRHGFLP 184
V + G + + +F E N ++++ MI G + E + L+ M G P
Sbjct: 75 AVEL----GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
D+F + AC K ++ GR +HS + G+ + +N+S++ +YAKCG++G+A+KLF
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP------------------- 285
+ ERD+V+WN++I+G+ + G + A F M+EEG EP
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 286 --------------GLVTW--NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
GL T+ + LI+ Y + G D A + +M + D W++MI
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMI 306
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
+ ++Q G++ A L +M +GV P++ T+ +I ++SL
Sbjct: 307 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 366
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
++ L+DMY KCG +E A R+F+ M ++ +WN +I Y H G +A LF +M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
PP+ +T+ +++ + +G Q F + + + + ++I ++G
Sbjct: 427 S---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
D+A + R F P+ + + +IL A
Sbjct: 484 LDEAWEFMER---FPGKPDEIMLAAILGA 509
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 221/491 (45%), Gaps = 58/491 (11%)
Query: 70 AVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKL 126
A+++ + G K TY + +C + I VGR +H+ ++GL +V+ + L
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVH--INHSL 173
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
+ MY+KCG + ARK+FDE+ ER+ +W++MI S ++ +DLF M GF PDE
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
L +L AC GDL TGRL+ +AI + S + + ++++Y KCG++ A+++F
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
M ++D V W A+IT + QNG +A K F M++ GV P T + ++++ +G ++
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 307 VDLMRKMESFGLTPDVY-------------------------------TWSSMISGFTQK 335
+ L ++Y TW++MI+ + +
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 336 GRTYHALDLLRKMLLSGVEPNSIT-VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G AL L +M V P+ IT + H + LV +
Sbjct: 414 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH----AGFCGKAYELFMKMQ 450
++ID+ S+ G L+ A + + I G CH KA + M+M+
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 451 DSDSPPN-VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW-------NSLIA 502
++ + N V++ N L M D++ + + G +K SW +A
Sbjct: 531 EAKNAGNYVISSNVLADMKMW----DESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Query: 503 G--FLQSGQKD 511
G +LQ G++D
Sbjct: 587 GSDYLQCGRED 597
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 45/349 (12%)
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA-LDLLRKML 349
N LI +LG + + L E P+ Y+++ MI G T + A L L R+M
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEE----PNHYSFNYMIRGLTNTWNDHEAALSLYRRMK 124
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
SG++P+ T +H K+ L DV +SLI MY+KCG +
Sbjct: 125 FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVG 184
Query: 410 AAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW-------- 461
A+++FD + ERD SWN++I GY AG+ A +LF KM++ P+ T
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 462 ---------------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
+ LI+ Y + G D A +F ++ IK++
Sbjct: 245 HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM-----IKKDR 299
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
+W ++I + Q+G+ +A ++F M+ ++P++ T+ ++L A ++ A + K+I
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
A +L I V+ L+D Y K G + + R+F+ +P+K+ +WN M++
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH-----ARIGLVGNVN 119
G DA+ + + E+G + T +++L +C + GR L +IGL +
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL----S 267
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
F+ +KL+SMY KCG L AR+VF++M +++ W+AMI S+ E LF++M +
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G PD L +L ACG G LE G+ I + A + +I V ++ +Y KCG +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A ++F++M ++ TWNA+IT + G ++A FD M V P +T+ ++++
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVH 444
Query: 300 LGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
G +M S FGL P + ++++I ++ G A + + +
Sbjct: 445 AGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 227/519 (43%), Gaps = 77/519 (14%)
Query: 92 LLQSCIDRDCIEVGRELHARIGLVG----NVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
L + C+ ++ R++HA + G +P+ L+SMY +CG L +ARKVFD+M
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 148 ERNLFTWSAMIGACSREKSWEE-VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
RN+ +++A+ A SR + L M P+ ++Q C D+ G
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
++S I+ G ++ V S++ +Y+ CG++ A+++F ++ RD+V WN +I G +N
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV------------------- 307
IE +F M GV+P T++I++ ++LG +
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 308 ----------DLMRKMESFGL--TPDVYTWSSMISGFTQKGRTYHALDLLRKML-LSGVE 354
D+ FG P++ +W+S+ISG ++ G A+ + R++L +S
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ T +HG K+ V G +L+ MY K + E+AQ++
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM------QDSDSPPNVV--------- 459
FD+M ERDV W +I G+ G A + F++M D S +V+
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 460 --------------------TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
AL+ Y ++G + A +F ++ WNS
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNP-----DLKCWNS 574
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++ + Q G +KA+ F ++ P++VT LS+L A
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 234/555 (42%), Gaps = 72/555 (12%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERN---LFTWSAMIGACSREKSWEEVVDLFYD 176
P+ L+SMY +C L +ARKVFD+M +RN LF SA+ S S +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 177 MVRHGFLPDEFLLPKILQACGKCGD---LETGRLIHSVAIRHGMCSSIR---VNNSIMAV 230
F+P + +++ KC L+ R IH++ + G ++ NN+++++
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQ-ARKYFDAMQEEGVEPGLVT 289
Y +CG + A+K+F M R+ V++NA+ + + +N D A M E V+P T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 290 WNILI------------ASYN----QLGRCDIAV-------------DLMRKMESFGLTP 320
+ L+ +S N +LG D V DL F
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 321 --DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
D W++MI G + + L R ML+SGV+P T
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IH + + D+ N+L+DMY CGD+ A +F ++ ++ SWN+II G GF
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 439 CGKAYELFMKMQDSDSP-PNVVTWNALIT---------------------GYMQSGAEDQ 476
+A ++ ++ +P P+ T++A I+ GY +S
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 477 AL--DLFKRIEKDGKIK-------RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
L FK E + K R+V W +I G + G + A+Q F M +
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS 501
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
+ ++ S++ A +++ ++ + HC A+R +SV L+D Y K+G + IF
Sbjct: 502 DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF 561
Query: 588 DGLPLKDIISWNIML 602
D+ WN ML
Sbjct: 562 SLASNPDLKCWNSML 576
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 235/538 (43%), Gaps = 49/538 (9%)
Query: 30 ASTRVHANSNYVSMSIR------------SLPYPKFMDAQ-LNQLCSNGP--LSDAVAIL 74
A+ +AN+N +SM +R +P+ + L S P S A +
Sbjct: 128 ATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLT 187
Query: 75 DSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKC 133
+A + K T+ +L+Q C + + +G L+++I +G + N V+T ++ MYS C
Sbjct: 188 THMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC 247
Query: 134 GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
G L AR++FD + R+ W+ MI + E+ + F +M+ G P +F +L
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV 253
C K G G+LIH+ I + + ++N+++ +Y CG+M A +F + + V
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 254 TWNAIITGFCQNGDIEQA----------------RKYFDAMQEEGVEPG-LVTWNILIAS 296
+WN+II+G +NG EQA F A EP V +L
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 297 YNQLG---RCDIAVDLM------RKMES----FGLTP--DVYTWSSMISGFTQKGRTYHA 341
+LG + L+ R+ ES F + DV W+ MI G ++ G + A
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
+ +M + ++ H + ++ + +L+DM
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 402 YSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
Y K G E A+ IF + D+ WN+++G Y G KA F ++ ++ P+ VT+
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
+L+ G+ Q L+ ++++ G IK ++ ++ ++G D+A+++ +
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKEQG-IKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 153/385 (39%), Gaps = 73/385 (18%)
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
N +I+ + + +EQARK FD M + + VT
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNI----VTL------------------------- 56
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
FGL+ V+ + SM S + + ++ M L+ + +V
Sbjct: 57 FGLSA-VFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIAS---SVVELTRKCVSITVLKR 112
Query: 376 XXEIHGIGVKM---SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
+IH + + + + N+LI MY +CG LE A+++FD M R+V S+N +
Sbjct: 113 ARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSA 172
Query: 433 YC-HAGFCGKAYELFMKMQDSDSPPNVVTWNALIT---------------------GY-- 468
Y + F A+ L M PN T+ +L+ GY
Sbjct: 173 YSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD 232
Query: 469 ----------MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
M S D L+ +RI D R+ +WN++I G L++ + + + FR
Sbjct: 233 NVVVQTSVLGMYSSCGD--LESARRI-FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 519 RMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
M + P T +L + L + K IH + + ++++ + N L+D Y G
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 579 NLMYSRRIFDGLPLKDIISWNIMLS 603
++ + +F + +++SWN ++S
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIIS 374
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 243/527 (46%), Gaps = 78/527 (14%)
Query: 138 EARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
+AR++F EM +R+L+ W+ ++ + SREK WEEV+ F M R PD F LP L+ACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 198 KCGDLETGRLIHSVAIRH-GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
+ ++ G +IH + + S + V +S++ +Y KCG M A ++F +++ D VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 257 AIITGFCQNGDIEQARKYFDAM-QEEGVEPGLVTWNILIA-----SYNQLGRC------- 303
++++GF +NG QA ++F M V P VT L++ S ++LGRC
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 304 -----DI------------------AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
D+ AV+L + + DV +WS++I+ + Q G
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE----KDVISWSTVIACYVQNGAAAE 247
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
AL + M+ G EPN TV + H + ++ L +V +L+D
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF-MKMQDSDSPPNVV 459
MY KC E A +F + +DV SW +I G+ G ++ E F + + ++++ P+ +
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 460 TWNALITGYMQSGAEDQA----------------------LDLFKRIEK--------DGK 489
++ + G +QA ++L+ R +G
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILPA--FANLV-AG 545
++ W SLI G+ G+ KA++ F M + ++ PN VT LSIL A A L+ G
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
++ ++ R L + +L+D + G+L + I +P
Sbjct: 488 LRIFKLMVNDYR--LAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPF 532
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 224/474 (47%), Gaps = 47/474 (9%)
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKV 142
++R + Y ++ + +D + +G +L +V + L+ MY KCG + EA ++
Sbjct: 72 ELREVNYGEMIHGFVKKD-VTLGSDL------------YVGSSLIYMYIKCGRMIEALRM 118
Query: 143 FDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG-FLPDEFLLPKILQACGKCGD 201
FDE+ + ++ TWS+M+ + S + V+ F MV PD L ++ AC K +
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
GR +H IR G + + + NS++ YAK A LFK + E+D ++W+ +I
Sbjct: 179 SRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIAC 238
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI----ASYN-QLGRCDIAVDLMRKMES- 315
+ QNG +A F+ M ++G EP + T ++ A+++ + GR + + + +E+
Sbjct: 239 YVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE 298
Query: 316 -----------------------FGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
F P DV +W ++ISGFT G + +++ MLL
Sbjct: 299 VKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLL 358
Query: 351 -SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
+ P++I + H +K + G SL+++YS+CG L
Sbjct: 359 ENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLG 418
Query: 410 AAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGY 468
A ++F+ + +D W ++I GY G KA E F M + S+ PN VT+ ++++
Sbjct: 419 NASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+G + L +FK + D ++ N+ + L+ + G D A++I +RM F
Sbjct: 479 SHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPF 532
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 189/437 (43%), Gaps = 82/437 (18%)
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP-------------- 285
A+++F M +R WN ++ + E+ +F M + +P
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 286 -----------GLVTWNI-----------LIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
G V ++ LI Y + GR A+ + ++E PD+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK----PDIV 128
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLL-SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
TWSSM+SGF + G Y A++ R+M++ S V P+ +T+ +HG
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
++ +D+ NSL++ Y+K + A +F M+ E+DV SW+T+I Y G +A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 443 YELFMKMQDSDSPPNVVTW-----------------------------------NALITG 467
+F M D + PNV T AL+
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF-FQIA 526
YM+ + ++A +F RI + ++V SW +LI+GF +G ++++ F M
Sbjct: 309 YMKCFSPEEAYAVFSRIPR-----KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
P+++ ++ +L + + L ++ K H ++ S + L++ Y++ G+L + ++
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 587 FDGLPLKDIISWNIMLS 603
F+G+ LKD + W +++
Sbjct: 424 FNGIALKDTVVWTSLIT 440
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNP 120
NG ++A+ + + + + G++ T + +LQ+C +E GR+ H R GL V
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK- 300
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM-VR 179
V T LV MY KC EA VF + +++ +W A+I + ++ F M +
Sbjct: 301 -VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
+ PD L+ K+L +C + G LE + HS I++G S+ + S++ +Y++CG +G
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM-QEEGVEPGLVTWNILIASYN 298
A K+F + +D+V W ++ITG+ +G +A + F+ M + V+P VT+ ++++ +
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 299 QLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
G + + + M + L P++ ++ ++ + G A+++ ++M S
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS 533
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 36/440 (8%)
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN---VNPFVETKLVSMYSKCGHLSEA 139
K P++++N+ + I+ + + +G+ + FV + +SMY++ G + +
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 140 RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV-RHGFLPDEFLLPKILQACGK 198
R+VFD ERN+ W+ MIG + E ++LF + + + DE A
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
+E GR H ++ I + NS+M +Y++CG + + +F SM ERD V+WN +
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA------------ 306
I+ F QNG ++ MQ++G + +T L+++ + L +I
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 307 ---------VDLMRK----------MESFGLTP-DVYTWSSMISGFTQKGRTYHALDLLR 346
+D+ K E G D TW+SMISG+TQ G T + R
Sbjct: 451 QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
KML + PN++TV ++HG ++ L +V ++L+DMYSK G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
++ A+ +F ER+ ++ T+I GY G +A LF+ MQ+S P+ +T+ A+++
Sbjct: 571 AIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 467 GYMQSGAEDQALDLFKRIEK 486
SG D+ L +F+ + +
Sbjct: 631 ACSYSGLIDEGLKIFEEMRE 650
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 245/564 (43%), Gaps = 88/564 (15%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI-GACSREKSWEEVVDLFYDM 177
P + ++L S + G+ AR++FD + + W+ +I G E + LFY
Sbjct: 39 TPSIRSRL-SKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL--LFYSR 95
Query: 178 VRHGFLP----DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
++ P D + L+AC + +L+ G+ +H IR SS V+NS+M +Y
Sbjct: 96 MKKT-APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 234 C------GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
C E +K+F +M ++ V WN +I+ + + G +A + F M V+P
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 288 VTW----------------NIL---------------------IASYNQLGRCDIAVDLM 310
V++ N+ I+ Y +LG ++
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD----IESS 270
Query: 311 RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXX 369
R++ + ++ W++MI + Q +++L + + S + + +T
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
+ HG K ++ NSL+ MYS+CG + + +F M ERDV SWNT+
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT---------------------GY 468
I + G + L +MQ + +T AL++ G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 469 MQSGAEDQALDLF----------KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
G +D++ K E G +R+ A+WNS+I+G+ Q+G +K +FR
Sbjct: 451 QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 519 RMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
+M I PN+VTV SILPA + + + K++H ++R+ L + V++ L+D Y+K+G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Query: 579 NLMYSRRIFDGLPLKDIISWNIML 602
+ Y+ +F ++ +++ M+
Sbjct: 571 AIKYAEDMFSQTKERNSVTYTTMI 594
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 222/528 (42%), Gaps = 82/528 (15%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHAR-IGLVGNVNPFVETKLVSMYSKCGHLSE------AR 140
TY + L++C + ++ G+ +H I + N + V L++MY C + + R
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 141 KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
KVFD MR +N+ W+ +I + E F M+R P + A
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 201 DLETGRLIHSVAIRHG--MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
++ + + + ++ G + V +S +++YA+ G++ ++++F S ER+ WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 259 ITGFCQNG------------------------------------DIEQARKYFDAMQEEG 282
I + QN +E R++ + +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
E +V N L+ Y++ G + + M DV +W++MIS F Q G L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE----RDVVSWNTMISAFVQNGLDDEGL 404
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMY 402
L+ +M G + + ITV + H ++ + + + + LIDMY
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN-SYLIDMY 463
Query: 403 SKCGDLEAAQRIFD--MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
SK G + +Q++F+ ERD +WN++I GY G K + +F KM + + PN VT
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 461 WNALITGYMQSGAED-----------QALD--------LFKRIEKDGKIK---------- 491
+++ Q G+ D Q LD L K G IK
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 492 -RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
RN ++ ++I G+ Q G ++A+ +F MQ I P+++T +++L A
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 154/297 (51%), Gaps = 3/297 (1%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+ ++ NG + + ++ + +QG K+ IT LL + + E+G++ HA +
Sbjct: 388 NTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIR 447
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDE--MRERNLFTWSAMIGACSREKSWEEVVD 172
G + + L+ MYSK G + ++K+F+ ER+ TW++MI ++ E+
Sbjct: 448 QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFL 507
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+F M+ P+ + IL AC + G ++ G+ +H +IR + ++ V ++++ +Y+
Sbjct: 508 VFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYS 567
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
K G + +A+ +F ER+SVT+ +I G+ Q+G E+A F +MQE G++P +T+
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVA 627
Query: 293 LIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
++++ + G D + + +M E + + P + + + GR A + ++ +
Sbjct: 628 VLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 684
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 156/387 (40%), Gaps = 82/387 (21%)
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY---NQLGRCDIAVDLMRKMES 315
++ CQ+G+ + AR+ FDA+ + P V WN +I + N + M+K
Sbjct: 46 LSKICQDGNPQLARQLFDAIPK----PTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAP 101
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
F D YT+SS + + K L +G
Sbjct: 102 F-TNCDAYTYSSTLKACAET-----------KNLKAG----------------------- 126
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMY------SKCGDLEAAQRIFDMMYERDVYSWNTI 429
+H ++ + NSL++MY C + + +++FD M ++V +WNT+
Sbjct: 127 -KAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTL 185
Query: 430 IGGYCHAGFCGKA---YELFMKMQDSDSPPNVVTWNALIT------------GYMQSGAE 474
I Y G +A + + M+M+ SP + V ++ G M +
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGD 245
Query: 475 DQALDLF-----------------KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+ DLF R D ++RN+ WN++I ++Q+ +++++F
Sbjct: 246 EYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF 305
Query: 518 -RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
+ +I + VT L A + L + ++ H + I + N L+ Y++
Sbjct: 306 LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSR 365
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
G++ S +F + +D++SWN M+S
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMIS 392
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 222/469 (47%), Gaps = 59/469 (12%)
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
R +FD + N+F ++M S+ +V+ L+ R G +PD F P ++++ G+
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
G L ++ + G V N IM +Y K + A+K+F + +R WN +
Sbjct: 119 FGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL 318
I+G+ + G+ E+A K FD M E V V+W ++I + ++ DL + F
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVK------DLENARKYFDR 223
Query: 319 TPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
P+ V +W++M+SG+ Q G T AL L ML GV PN T
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
+ + + + + +L+DM++KC D+++A+RIF+ +
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL------------------ 325
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
+ N+VTWNA+I+GY + G A LF D KRNV S
Sbjct: 326 ----------------GTQRNLVTWNAMISGYTRIGDMSSARQLF-----DTMPKRNVVS 364
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA 555
WNSLIAG+ +GQ A++ F M + P+ VT++S+L A ++ A ++ +
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM-ADLELGDCIVDY 423
Query: 556 LRRNLVS-EISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+R+N + S LI YA+ GNL ++R+FD + +D++S+N + +
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFT 472
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 182/365 (49%), Gaps = 43/365 (11%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
T +++ ++K L ARK FD M E+++ +W+AM+ ++ E+ + LF DM+R G
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P+E ++ AC D R + + + + V +++ ++AKC ++ A+++
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 244 FKSM-DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
F + +R+ VTWNA+I+G+ + GD+ AR+ FD M + V V+WN LIA Y G+
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQ 377
Query: 303 CDIAVDLMRKMESFGLT-PDVYTWSSMISGFTQKGRTYHALDL-LRKMLLSGVEPNSITV 360
+A++ M +G + PD T MIS + G H DL L ++ + N I
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVT---MISVLSACG---HMADLELGDCIVDYIRKNQI-- 429
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
+++ G + SLI MY++ G+L A+R+FD M E
Sbjct: 430 -----------------KLNDSGYR-----------SLIFMYARGGNLWEAKRVFDEMKE 461
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
RDV S+NT+ + G + L KM+D P+ VT+ +++T ++G + +
Sbjct: 462 RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Query: 481 FKRIE 485
FK I
Sbjct: 522 FKSIR 526
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 50/289 (17%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL-----H 109
+A L+ NG DA+ + + + G + T++ ++ +C R + R L
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 110 ARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM-RERNLFTWSAMIGACSR----- 163
R+ L N FV+T L+ M++KC + AR++F+E+ +RNL TW+AMI +R
Sbjct: 293 KRVRL----NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMS 348
Query: 164 -------------EKSWEEV-------------VDLFYDMVRHG-FLPDEFLLPKILQAC 196
SW + ++ F DM+ +G PDE + +L AC
Sbjct: 349 SARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNN----SIMAVYAKCGEMGFAKKLFKSMDERDS 252
G DLE G I + + + I++N+ S++ +YA+ G + AK++F M ERD
Sbjct: 409 GHMADLELGDCI----VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV 464
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
V++N + T F NGD + M++EG+EP VT+ ++ + N+ G
Sbjct: 465 VSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 64 NGPLSDAVAILDSLAEQG-SKVRPITYMNLLQSCIDRDCIEVGREL--HARIGLVGNVNP 120
NG + A+ + + + G SK +T +++L +C +E+G + + R + +N
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI-KLND 433
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
L+ MY++ G+L EA++VFDEM+ER++ +++ + A + E ++L M
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLI 208
G PD +L AC + G L+ G+ I
Sbjct: 494 GIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 229/512 (44%), Gaps = 73/512 (14%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V+T L+++Y K G ++ A+ +FDEM ER+ W+A+I SR + LF M++
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
GF P L +L CG+CG + GR +H VA + G+ +V N++++ Y+KC E+G A
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT-WNILIASYNQ 299
+ LF+ M ++ +V+WN +I + Q+G E+A F M E+ VE VT N+L A +
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH 265
Query: 300 -------------------------LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
RC V R S + +S++S + +
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS-AKQDSIVGLTSIVSCYAE 324
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
KG A+ K ++ +++ + +HG +K L L
Sbjct: 325 KGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLV 384
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
N LI MYSK D+E +F+ + E + SWN++I G +G A+E+F +M +
Sbjct: 385 VNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG 444
Query: 455 -PPNVVTWNALITG-----------------------------------YMQSGAEDQAL 478
P+ +T +L+ G Y + G E QA
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+FK I+ A+WNS+I+G+ SG + +A+ + M+ + P+ +T L +L A
Sbjct: 505 SVFKSIKAP-----CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 539 FANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
+ G V E C R ++ E +S L
Sbjct: 560 CNH---GGFVDEGKICF--RAMIKEFGISPTL 586
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 237/514 (46%), Gaps = 54/514 (10%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---ARIGLVGNVNP 120
NG DA + + +QG T +NLL C + GR +H A+ GL ++
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGL--ELDS 186
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V+ L+S YSKC L A +F EM++++ +W+ MIGA S+ EE + +F +M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
+ +L A + +H + ++ GM + I V S++ Y++CG + A
Sbjct: 247 NVEISPVTIINLLSA------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF----------DAMQEEGV------- 283
++L+ S + V +I++ + + GD++ A YF DA+ G+
Sbjct: 301 ERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKS 360
Query: 284 --------------EPGLVT----WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
+ GL T N LI Y++ + + L +++ TP + +W
Sbjct: 361 SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE---TPLI-SW 416
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+S+ISG Q GR A ++ +M+L+G + P++IT+ E+HG +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
+ + ++ +LIDMY+KCG+ A+ +F + +WN++I GY +G +A
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 445 LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
+++M++ P+ +T+ +++ G D+ F+ + K+ I + + ++
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLL 596
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++ +A+ + +M I P+S ++L A
Sbjct: 597 GRACLFTEALYLIWKM---DIKPDSAVWGALLSA 627
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 222/530 (41%), Gaps = 92/530 (17%)
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL- 207
R+L + +++ +C + + +F D++R P+ F + LQA + +L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT--SFNSFKLQ 68
Query: 208 ---IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
+ + + G+ + V S++ +Y K G + A+ LF M ERD+V WNA+I G+ +
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTW---------------------------------- 290
NG A K F M ++G P T
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 291 -NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
N LI+ Y++ A L R+M+ +W++MI ++Q G A+ + + M
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKD----KSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
VE + +T+ +H + VK +V+D+ SL+ YS+CG L
Sbjct: 245 EKNVEISPVTIINLLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 410 AAQRIFDMMYERDVYSWNTIIGGYCHAG-------FCGKAYELFMKMQ------------ 450
+A+R++ + + +I+ Y G + K +L MK+
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 451 ----------------DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
S + N LIT Y + + L LF+++++ I
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLI---- 414
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAPNSVTVLSILPAFANLVAGKKVKEIHC 553
SWNS+I+G +QSG+ A ++F +M + P+++T+ S+L + L KE+H
Sbjct: 415 -SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 554 CALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
LR N +E V LID YAK GN + + +F + +WN M+S
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 38/326 (11%)
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT--VXXXXXXX 367
MR + L D+ + S++ + + + R +L S + PN T +
Sbjct: 1 MRITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT 60
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
++ K L V SL+++Y K G + +AQ +FD M ERD WN
Sbjct: 61 SFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI-----TGYMQSGAEDQALDLFK 482
+I GY G+ A++LF+ M P+ T L+ G++ G +
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS 180
Query: 483 RIEKDGKIK-------------------------RNVASWNSLIAGFLQSGQKDKAMQIF 517
+E D ++K ++ SWN++I + QSG +++A+ +F
Sbjct: 181 GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKS 577
+ M + + VT++++L A + + +HC ++ +V++ISV L+ +Y++
Sbjct: 241 KNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 578 GNLMYSRRIFDGLPLKDIISWNIMLS 603
G L+ + R++ I+ ++S
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVS 320
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 208/418 (49%), Gaps = 17/418 (4%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F K+++ + G + A +VF MR +N TW++++ S++ S +D +
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD F +L + + E + S N+++ YA+ GEM A
Sbjct: 122 ---PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW----NTMITGYARRGEMEKA 174
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
++LF SM E++ V+WNA+I+G+ + GD+E+A +F GV V W +I Y +
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKA 230
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
+ ++A + + M + ++ TW++MISG+ + R L L R ML G+ PNS +
Sbjct: 231 KKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
+IH I K +L +DV SLI MY KCG+L A ++F++M +
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
+DV +WN +I GY G KA LF +M D+ P+ +T+ A++ +G + +
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
F+ + +D K++ + ++ ++G+ ++A+++ R M F P++ ++L A
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF---RPHAAVFGTLLGA 462
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 66/367 (17%)
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
L K D+ N II ++GDI+ A + F M+ + +TWN L+
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNT----ITWNSLLIG------ 101
Query: 303 CDIAVDLMRKMESFGL-----TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
I+ D R ME+ L PD ++++ M+S + + A +M
Sbjct: 102 --ISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK------ 153
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
D + N++I Y++ G++E A+ +F
Sbjct: 154 ---------------------------------DAASWNTMITGYARRGEMEKARELFYS 180
Query: 418 MYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP-PNVVTWNALITGYMQSGAEDQ 476
M E++ SWN +I GY G KA F +P VV W A+ITGYM++ +
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFF-----KVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
A +FK D + +N+ +WN++I+G++++ + + +++FR M I PNS + S L
Sbjct: 236 AEAMFK----DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 537 PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDII 596
+ L A + ++IH + L ++++ LI Y K G L + ++F+ + KD++
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 597 SWNIMLS 603
+WN M+S
Sbjct: 352 AWNAMIS 358
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 48/289 (16%)
Query: 107 ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS 166
E H + + F ++S Y + + +A+ FD M ++ +W+ MI +R
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS 226
E+ +LFY M+ +E ++ +CGDLE VA G+ + +
Sbjct: 171 MEKARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW----TA 222
Query: 227 IMAVYAKCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
++ Y K ++ A+ +FK M ++ VTWNA+I+G+ +N E K F AM EEG+ P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 286 G-----------------------------------LVTWNILIASYNQLGRCDIAVDLM 310
+ LI+ Y + G A L
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 311 RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
M+ DV W++MISG+ Q G AL L R+M+ + + P+ IT
Sbjct: 343 EVMKK----KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 14/299 (4%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---AR 111
+A ++ N D + + ++ E+G + + L C + +++GR++H ++
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
L +V T L+SMY KCG L +A K+F+ M+++++ W+AMI ++ + ++ +
Sbjct: 313 STLCNDVTAL--TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA-V 230
LF +M+ + PD +L AC G + G +R + + M +
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ-NGDIEQARKYFDAMQEEGVE--PGL 287
+ G++ A KL +SM R + G C+ + ++E A + + + + G
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW---SSMISGFTQKGRTYHALD 343
V + AS N+ D+A R ES + Y+W + + F R + LD
Sbjct: 491 VQLANIYASKNRWE--DVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELD 547
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 237/532 (44%), Gaps = 37/532 (6%)
Query: 57 QLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL-V 115
L L + L++A L + + G V +Y L ++C + + GR LH R+ + +
Sbjct: 54 HLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
N + ++ ++ MY +C L +A K+FDEM E N + + MI A + + ++ V LF
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M+ G P + +L++ L+ GR IH+ IR G+CS+ + I+ +Y KCG
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ AK++F M + V ++ G+ Q G A K F + EGVE +++++
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK 293
Query: 296 SYNQLGRCDIA----------------------VDLMRKMESFGLT---------PDVYT 324
+ L ++ VD K SF P+ +
Sbjct: 294 ACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEP-NSITVXXXXXXXXXXXXXXXXXEIHGIG 383
WS++ISG+ Q + A+ + + NS T ++H
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
+K SL+ ++LI MYSKCG L+ A +F+ M D+ +W I G+ + G +A
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEAL 473
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
LF KM PN VT+ A++T +G +Q + + + + ++ +I
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDI 533
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL----VAGKKVKEI 551
+ +SG D+A++ + M F A + LS NL +AG++++++
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 212/515 (41%), Gaps = 82/515 (15%)
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-S 220
S+ + E + +M + G + + +AC + L GRL+H +R G+ + S
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPS 117
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
+ + N ++ +Y +C + A KLF M E ++V+ +I+ + + G +++A F M
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 281 EGVEPGLVTWNILIASY--------------------------------NQLGRCDIAVD 308
G +P + L+ S N +C V
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
R + + V M+ G+TQ GR AL L ++ GVE +S
Sbjct: 238 AKRVFDQMAVKKPVACTGLMV-GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
+IH K+ L +V G L+D Y KC E+A R F + E + SW+
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSD-SPPNVVTW-------------------------- 461
II GYC +A + F ++ + S N T+
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 462 ---------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
+ALIT Y + G D A ++F+ ++ ++ +W + I+G G +
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNP-----DIVAWTAFISGHAYYGNASE 471
Query: 513 AMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC--CALRR-NLVSEISVSNI 569
A+++F +M + PNSVT +++L A ++ AG + HC LR+ N+ I +
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSH--AGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
+ID YA+SG L + + +P + D +SW LS
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 211/382 (55%), Gaps = 43/382 (11%)
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
K G++ A+KLF + ERD VTW +ITG+ + GD+ +AR+ FD + +VTW
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTA 114
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
+++ Y + + IA L ++M +V +W++MI G+ Q GR AL+L +M
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEM---- 166
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-----DVLTGNSLIDMYSKCGD 407
E N ++ I M+L + DV++ +++D +K G
Sbjct: 167 PERNIVSWNSMVKALVQRGR---------IDEAMNLFERMPRRDVVSWTAMVDGLAKNGK 217
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
++ A+R+FD M ER++ SWN +I GY +A +LF M + D +WN +ITG
Sbjct: 218 VDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD----FASWNTMITG 273
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIA 526
++++ ++A LF R+ ++NV SW ++I G++++ + ++A+ +F +M + +
Sbjct: 274 FIRNREMNKACGLFDRMP-----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 527 PNSVTVLSILPA---FANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
PN T +SIL A A LV G+++ ++ ++ + +EI V++ L++ Y+KSG L+ +
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK--NEI-VTSALLNMYSKSGELIAA 385
Query: 584 RRIFDG--LPLKDIISWNIMLS 603
R++FD + +D+ISWN M++
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIA 407
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 226/452 (50%), Gaps = 30/452 (6%)
Query: 40 YVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDR 99
Y S S +P P+++ + +LC G +++A + D L E+ +T+ +++ I
Sbjct: 38 YSSSSRPRVPQPEWL---IGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGYIKL 90
Query: 100 DCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIG 159
+ REL R+ NV + T +VS Y + LS A +F EM ERN+ +W+ MI
Sbjct: 91 GDMREARELFDRVDSRKNVVTW--TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 160 ACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS 219
++ ++ ++LF +M + ++ ++Q GR+ ++ + M
Sbjct: 149 GYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQ---------RGRIDEAMNLFERMPR 199
Query: 220 SIRVNNSIMAV-YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
V+ + M AK G++ A++LF M ER+ ++WNA+ITG+ QN I++A + F M
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
E +WN +I + + + A L +M +V +W++MI+G+ +
Sbjct: 260 PERD----FASWNTMITGFIRNREMNKACGLFDRMPE----KNVISWTTMITGYVENKEN 311
Query: 339 YHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
AL++ KML G V+PN T +IH + K + + ++
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 398 LIDMYSKCGDLEAAQRIFD--MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
L++MYSK G+L AA+++FD ++ +RD+ SWN++I Y H G +A E++ +M+
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKD 487
P+ VT+ L+ +G ++ ++ FK + +D
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
+ L + S S P V LI + G +A LF DG +R+V +W +I
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLF-----DGLPERDVVTWTHVIT 85
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS 562
G+++ G +A ++F R+ + N VT +++ + + + RN+VS
Sbjct: 86 GYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 563 EISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
N +ID YA+SG + + +FD +P ++I+SWN M+
Sbjct: 143 ----WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMV 178
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 252/529 (47%), Gaps = 48/529 (9%)
Query: 119 NPFVETKLVSMYSKCGHLSE-ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
N FV L+SMY+KCG + + +VF+ + + N +++A+IG +RE E V +F M
Sbjct: 172 NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 178 VRHGFLPDEFLLPKIL------QACGKCGDL---ETGRLIHSVAIRHGMCSSIRVNNSIM 228
G D L IL + C ++ E G+ IH +A+R G + +NNS++
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+YAK +M A+ +F M E + V+WN +I GF Q +++ ++ M++ G +P V
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T ++ + + G V+ R++ S P V W++M+SG++ A+ R+M
Sbjct: 352 TCISVLGACFRSG----DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
++P+ T+ +IHG+ ++ + + + LI +YS+C +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 409 EAAQRIF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALI- 465
E ++ IF D + E D+ WN++I G+ H KA LF +M Q + PN ++ ++
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 466 --------------------TGYMQSGAEDQAL-DLFKRIEK--------DGKIKRNVAS 496
+GY+ + AL D++ + + D +++N
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI 587
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
WN +I G+ +G+ D+A+ ++R+M P+ +T +S+L A ++ + EI
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ 647
Query: 557 R-RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
R + E+ ++D ++G L + ++ + P K + W I+LS
Sbjct: 648 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 243/550 (44%), Gaps = 108/550 (19%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
++ K G L EA +VFD M ER++ +W+ MI R+ E+ + ++ MV GFLP
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM-GFAKKLF 244
F L +L AC K D G H VA++ G+ +I V N+++++YAKCG + + ++F
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-NILIASY------ 297
+S+ + + V++ A+I G + + +A + F M E+GV+ V NIL S
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 298 -------NQLG--------RCDIAVDLMRK---MESFGLTPD---------------VYT 324
N+LG R DL +E + D V +
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+ MI GF Q+ R+ +++ L +M SG +PN +T
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCI----------------------- 354
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
S++ + GD+E +RIF + + V +WN ++ GY + +A
Sbjct: 355 ------------SVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 445 LFMKMQDSDSPPNVVTWNALITG-----YMQSGAEDQALDLFKRIEKDGKI--------- 490
F +MQ + P+ T + +++ +++ G + + + I K+ I
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS 462
Query: 491 -----------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTV 532
+ ++A WNS+I+GF + KA+ +FRRM Q + PN +
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
++L + + L + ++ H ++ VS+ V L D Y K G + +R+ FD +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 593 KDIISWNIML 602
K+ + WN M+
Sbjct: 583 KNTVIWNEMI 592
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 221/515 (42%), Gaps = 82/515 (15%)
Query: 47 SLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI---- 102
S P A + L + +AV + + E+G +V + N+L R+
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 103 -----EVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTW 154
E+G+++H R+G G+++ + L+ +Y+K ++ A +F EM E N+ +W
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLH--LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 155 SAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIR 214
+ MI +E ++ V+ M GF P+E +L AC + GD+ETGR
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR-------- 370
Query: 215 HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKY 274
++F S+ + WNA+++G+ E+A
Sbjct: 371 ---------------------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLG-------------RCDIA---------VDLMRK 312
F MQ + ++P T +++++S +L R +I+ + + +
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 313 MESFGLTP----------DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE-PNSITVX 361
E ++ D+ W+SMISGF AL L R+M + V PN +
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER 421
+ HG+ VK V D +L DMY KCG++++A++ FD + +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
+ WN +I GY H G +A L+ KM S P+ +T+ +++T SG + L++
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+++ I+ + + ++ ++G+ + A ++
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 212/471 (45%), Gaps = 55/471 (11%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
+VR G D +L ++L +CGD + R + +++R + N+ + K G
Sbjct: 32 IVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR-----DVYSWNAFLTFRCKVG 86
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW----- 290
++G A ++F M ERD V+WN +I+ + G E+A + M +G P T
Sbjct: 87 DLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLS 146
Query: 291 -------------------------NILI--ASYNQLGRCDIAVDL-MRKMESFGLTPDV 322
NI + A + +C VD +R ES P+
Sbjct: 147 ACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS-QPNE 205
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG- 381
+++++I G ++ + A+ + R M GV+ +S+ + EI+G
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 382 --------IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
+ +++ D+ NSL+++Y+K D+ A+ IF M E +V SWN +I G+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
K+ E +M+DS PN VT +++ +SG + +F I + +
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQP-----S 380
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
V++WN++++G+ ++A+ FR+MQF + P+ T+ IL + A L + K+IH
Sbjct: 381 VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHG 440
Query: 554 CALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDG-LPLKDIISWNIMLS 603
+R + + + LI Y++ + S IFD + DI WN M+S
Sbjct: 441 VVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 178/441 (40%), Gaps = 116/441 (26%)
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
+G++IH +R GM S + N ++ +Y +CG+ +A+K+F M RD +WNA +T C
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ GD+ +A + FD M E V V+WN
Sbjct: 84 KVGDLGEACEVFDGMPERDV----VSWN-------------------------------- 107
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
+MIS +KG AL + ++M+ G P+ T+ HG+
Sbjct: 108 ---NMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
VK L ++ GN+L+ MY+KCG + + R+F+ + + + S+ +IGG +A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 443 YELFMKM------QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRI------------ 484
++F M DS N+++ +A G S +E +L K+I
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREG-CDSLSEIYGNELGKQIHCLALRLGFGGD 283
Query: 485 --------EKDGKIKR--------------NVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
E K K NV SWN +I GF Q + DK+++ RM+
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMY 582
PN VT +S+L A +SG++
Sbjct: 344 SGFQPNEVTCISVLGAC-----------------------------------FRSGDVET 368
Query: 583 SRRIFDGLPLKDIISWNIMLS 603
RRIF +P + +WN MLS
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLS 389
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 221/498 (44%), Gaps = 92/498 (18%)
Query: 84 VRPITYMNLLQSCIDRDCIEVGRELHARIGLVG--NVNPFVETKLVSMYSKCGH---LSE 138
+R ++LL +C ++ R +HA++ +G N N + +KL+ H L
Sbjct: 31 IRNHPSLSLLHNC---KTLQSLRIIHAQMIKIGLHNTN-YALSKLIEFCILSPHFEGLPY 86
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
A VF ++E NL W+ M + + L+ M+ G LP+ + P +L++C K
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
+ G+ IH ++ G + V+ S++++Y + G + A K+F RD V++ A+
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL 318
I G+ G IE A+K FD +
Sbjct: 207 IKGYASRGYIENAQKLFDEIP--------------------------------------- 227
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
DV +W++MISG+ + G AL+L + M+ + V P+ T+ +
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 379 IH------GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
+H G G + +V N+LID+YSKCG+LE A +F+ + +DV SWNT+IGG
Sbjct: 288 VHLWIDDHGFGSNLKIV------NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED----------------- 475
Y H +A LF +M S PN VT +++ GA D
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 476 -------QALDLFKR---IEKDGKI-----KRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+D++ + IE ++ ++++SWN++I GF G+ D + +F RM
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 521 QFFQIAPNSVTVLSILPA 538
+ I P+ +T + +L A
Sbjct: 462 RKIGIQPDDITFVGLLSA 479
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+A ++ G +A+ + + + + T + ++ +C IE+GR++H I
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 115 VG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
G N + L+ +YSKCG L A +F+ + +++ +W+ +IG + ++E + L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH--GMCSSIRVNNSIMAVY 231
F +M+R G P++ + IL AC G ++ GR IH + G+ ++ + S++ +Y
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
AKCG++ A ++F S+ + +WNA+I GF +G + + F M++ G++P +T+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 292 ILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKG 336
L+++ + G D+ + R M + + +TP + + MI G
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 190/447 (42%), Gaps = 90/447 (20%)
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC------GEMGFAKKLFKSMDERDS 252
C L++ R+IH+ I+ G+ ++ N ++ + C + +A +FK++ E +
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNT---NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
+ WN + G + D A K + M G+ P T+ ++ S + +
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
+ G D+Y +S+IS + Q GR A + K P+
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK------SPHR--------------- 198
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
DV++ +LI Y+ G +E AQ++FD + +DV SWN +I G
Sbjct: 199 ------------------DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVT----------------------W--------- 461
Y G +A ELF M ++ P+ T W
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 462 ----NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
NALI Y + G + A LF+R+ ++V SWN+LI G+ +A+ +F
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPY-----KDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR--NLVSEISVSNILIDSYA 575
+ M PN VT+LSILPA A+L A + IH +R + + S+ LID YA
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 576 KSGNLMYSRRIFDGLPLKDIISWNIML 602
K G++ + ++F+ + K + SWN M+
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMI 442
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 228/518 (44%), Gaps = 80/518 (15%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
T ++LLQ ++ + + + ++ + ++ + G+L AR+VFD+M
Sbjct: 17 TSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINA---------GNLRAARQVFDKMP 67
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDM--VRHGFLPDEFLLPKILQACGKCGDLETG 205
++ +W+++I + +E + LF M V H PD +L +L+ACG+ ++ G
Sbjct: 68 HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYG 127
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+H+ A++ + SS+ V +S++ +Y + G++ + ++F M R++VTW AIITG
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 266 GDIEQARKYFDAMQE-----------------------------------EGVEPGLVTW 290
G ++ YF M G L
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N L Y + G + L M DV +W+S+I + + G+ A++ KM
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSE----RDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
S V PN T ++H + + L D + NS++ MYS CG+L +
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT---- 466
A +F M RD+ SW+TIIGGYC AGF + ++ F M+ S + P +L++
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 467 -GYMQSGAEDQALDLFKRIEKD--------------GKIKR-----------NVASWNSL 500
++ G + AL L +E++ G IK ++ S ++
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
I G+ + G+ +A+ +F + P+SVT +S+L A
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 232/544 (42%), Gaps = 50/544 (9%)
Query: 92 LLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+L++C I G LHA + L+ +V +V + L+ MY + G + ++ +VF EM
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSV--YVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
RN TW+A+I ++E + F +M R L D + L+AC ++ G+ I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H+ I G +++ V NS+ +Y +CGEM LF++M ERD V+W ++I + + G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP-------- 320
+A + F M+ V P T+ + ++ L R L + S GL
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 321 -----------------------DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
D+ +WS++I G+ Q G M SG +P
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
+ ++H + + L + +SLI+MYSKCG ++ A IF
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 418 MYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA 477
D+ S +I GY G +A +LF K P+ VT+ +++T SG D
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
F +++ ++ + ++ ++G+ A ++ M + + T+L
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 538 AFANLVAGKKVKEI-----HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
A ++ G++ E CA + ++++NI Y+ +GNL + + +
Sbjct: 592 AKGDIERGRRAAERILELDPTCA-----TALVTLANI----YSSTGNLEEAANVRKNMKA 642
Query: 593 KDII 596
K +I
Sbjct: 643 KGVI 646
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 198/447 (44%), Gaps = 37/447 (8%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF-VETKLVSMYSKCGHLSEARKVFDEM 146
T+ L++C ++ G+ +H + + G V V L +MY++CG + + +F+ M
Sbjct: 211 TFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENM 270
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
ER++ +W+++I A R + V+ F M P+E + AC L G
Sbjct: 271 SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
+H + G+ S+ V+NS+M +Y+ CG + A LF+ M RD ++W+ II G+CQ G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 267 DIEQARKYFDAMQEEGVEPG-LVTWNILIASYN----QLGRCDIAVDLMRKMES------ 315
E+ KYF M++ G +P ++L S N + GR A+ L +E
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 316 ------------------FGLT--PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
FG T D+ + ++MI+G+ + G++ A+DL K L G P
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 356 NSIT-VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR- 413
+S+T + + + ++ ++D+ + G L A++
Sbjct: 511 DSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKM 570
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
I +M +++D W T++ G + ++ + D P L Y +G
Sbjct: 571 INEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD-PTCATALVTLANIYSSTGN 629
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSL 500
++A ++ K ++ G IK W+S+
Sbjct: 630 LEEAANVRKNMKAKGVIKE--PGWSSI 654
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 42/319 (13%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLL--SGVEPNSITVXXXXXXXXXXXXXXXXXE 378
D+ +W+S+I + + AL L M + V P++ +
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
+H VK SL+ V G+SL+DMY + G ++ + R+F M R+ +W II G HAG
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 439 CGKAYELFMKMQDSDSPPNVVTW-----------------------------------NA 463
+ F +M S+ + T+ N+
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
L T Y + G L LF+ + + R+V SW SLI + + GQ+ KA++ F +M+
Sbjct: 250 LATMYTECGEMQDGLCLFENMSE-----RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS 304
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
Q+ PN T S+ A A+L +++HC L L +SVSN ++ Y+ GNL+ +
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 584 RRIFDGLPLKDIISWNIML 602
+F G+ +DIISW+ ++
Sbjct: 365 SVLFQGMRCRDIISWSTII 383
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 183/464 (39%), Gaps = 90/464 (19%)
Query: 221 IRVNNSIMAVY---------AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQA 271
+R++N +M + G + A+++F M D V+W +II + + ++A
Sbjct: 31 VRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEA 90
Query: 272 RKYFDAMQ--EEGVEPGLVTWNILIAS--------------------------------- 296
F AM+ + V P ++++ +
Sbjct: 91 LILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLL 150
Query: 297 --YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
Y ++G+ D + + +M + TW+++I+G GR L +M S
Sbjct: 151 DMYKRVGKIDKSCRVFSEMP----FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
++ T IH + V + NSL MY++CG+++ +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------- 461
F+ M ERDV SW ++I Y G KA E F+KM++S PPN T+
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 462 ----------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
N+++ Y G A LF+ G R++ SW++
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ-----GMRCRDIISWST 381
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
+I G+ Q+G ++ + F M+ P + S+L N+ + +++H AL
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L +V + LI+ Y+K G++ + IF DI+S M++
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMIN 485
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 12/285 (4%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNP 120
C G + + + G+K +LL + IE GR++HA G N
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V + L++MYSKCG + EA +F E ++ + +AMI + +E +DLF ++
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 181 GFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
GF PD +L AC G L+ G + + + M + ++ + + G +
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSD 566
Query: 240 AKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-Y 297
A+K+ M ++D V W ++ GDIE+ R+ + + E ++P T + +A+ Y
Sbjct: 567 AEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE--LDPTCATALVTLANIY 624
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSM-----ISGFTQKGR 337
+ G + A ++ + M++ G+ + WSS+ +S F R
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEP-GWSSIKIKDCVSAFVSGDR 668
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 244/517 (47%), Gaps = 35/517 (6%)
Query: 92 LLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
L Q+C + I +++HA + GL+ N++ E + S G L A K+FDE+ +
Sbjct: 18 LWQNCKN---IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPK 74
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
++ + ++ ++ E+ V L+ +M + G PD + +L+AC K G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H +RHG + V N+++ +A CG++G A +LF + V W+++ +G+ + G I
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
++A + FD M + V WN++I + D A +L + DV TW++M
Sbjct: 195 DEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTE----KDVVTWNAM 246
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH-----GIG 383
ISG+ G AL + ++M +G P+ +T+ +H
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
V S+ N+LIDMY+KCG ++ A +F + +RD+ +WNT+I G G +
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SI 365
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
E+F +MQ PN VT+ +I SG D+ F + I+ N+ + ++
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKEIHCCALRRNL 560
++GQ ++A M +I PN++ ++L A + N+ GK E ++R++
Sbjct: 426 LGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELGKYANE-KLLSMRKDE 481
Query: 561 VSE-ISVSNILIDSYAKSGN---LMYSRRIFDGLPLK 593
+ + +SNI YA +G + R++FD +K
Sbjct: 482 SGDYVLLSNI----YASTGQWDGVQKVRKMFDDTRVK 514
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 14/288 (4%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PDV + ++ G Q + + L +M GV P+ T
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
HG V+ V + N+LI ++ CGDL A +FD + +W+++ GY G
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
+A LF +M D V WN +ITG ++ D A +LF R +++V +WN+
Sbjct: 195 DEAMRLFDEMPYKDQ----VAWNVMITGCLKCKEMDSARELFDRF-----TEKDVVTWNA 245
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
+I+G++ G +A+ IF+ M+ P+ VT+LS+L A A L + K +H L
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 560 LVSE-----ISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
VS + N LID YAK G++ + +F G+ +D+ +WN ++
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+A ++ + G +A+ I + + G +T ++LL +C +E G+ LH I
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 115 VGNVNP--FVET----KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWE 168
+V+ +V T L+ MY+KCG + A +VF +++R+L TW+ +I + + E
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-E 362
Query: 169 EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSI 227
+++F +M R P+E ++ AC G ++ GR S+ + + +I+ +
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422
Query: 228 MAVYAKCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQ-NGDIEQAR 272
+ + + G++ A +SM E +++ W ++ G C+ G++E +
Sbjct: 423 VDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL-GACKIYGNVELGK 468
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 205/449 (45%), Gaps = 38/449 (8%)
Query: 104 VGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA 160
VGR+ HA ++ G++ +V+T LV MY K G + + KVF M ERN +TWS M+
Sbjct: 136 VGRQAHALVVKMSSFGDI--YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSG 193
Query: 161 CSREKSWEEVVDLFYDMVRHG--FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ EE + +F +R +++ +L + + GR IH + I++G+
Sbjct: 194 YATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLL 253
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+ ++N+++ +Y+KC + A K+F S +R+S+TW+A++TG+ QNG+ +A K F M
Sbjct: 254 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 279 QEEGVEPG----------------------LVTWNILIASYNQLGRCDIAVDLMRKMESF 316
G++P L ++ + + L VD+ K
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 317 G---------LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXX 367
DV W+S+ISG+ Q AL L R+M +G+ PN T+
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
++HG +K +V G++L MYSKCG LE +F +DV SWN
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKD 487
+I G H G +A ELF +M P+ VT+ +I+ G ++ F +
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Query: 488 GKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ V + ++ ++GQ +A +
Sbjct: 554 IGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 217/486 (44%), Gaps = 66/486 (13%)
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P L K L + +L GR +H IR G + I+ N ++ YAKCG++ A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQAR---KYFDAMQEEGVEPGLVTWNILIASYNQL 300
F ++ +D V+WN++ITG+ QNG I + + F M+ + + P T + + + L
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 301 GRCDI---AVDLMRKMESFG----------------LTPD------------VYTWSSMI 329
+ A L+ KM SFG L D YTWS+M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVE--PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
SG+ +GR A+ + L E + +IH I +K
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
L+ V N+L+ MYSKC L A ++FD +R+ +W+ ++ GY G +A +LF
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 448 KMQDSDSPPNVVTWNALITG-----YMQSGAEDQALDLFKRIEK---------------- 486
+M + P+ T ++ Y++ G + + L E+
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 487 ---------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
D +R+VA W SLI+G++Q+ ++A+ ++RRM+ I PN T+ S+L
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A ++L + K++H ++ E+ + + L Y+K G+L +F P KD++S
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 598 WNIMLS 603
WN M+S
Sbjct: 492 WNAMIS 497
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 229/506 (45%), Gaps = 77/506 (15%)
Query: 105 GRELHARIGLVGNVNPFVETK-LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
GR +H +I G LV+ Y+KCG L++A +F+ + +++ +W+++I S+
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 164 E---KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
S V+ LF +M LP+ + L I +A GR H++ ++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM-- 278
I V+ S++ +Y K G + K+F M ER++ TW+ +++G+ G +E+A K F+
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 279 -QEEGVEPGLVTWNIL--IAS--YNQLGR-----------------CDIAVDLMRKMESF 316
+EEG + V +L +A+ Y LGR + V + K ES
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 317 GLTPDVY---------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXX 367
++ TWS+M++G++Q G + A+ L +M +G++P+ T+
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
++H +K+ + +L+DMY+K G L A++ FD + ERDV W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPN------------------------------ 457
++I GY +A L+ +M+ + PN
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 458 -----VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
V +AL T Y + G+ + +F+R ++V SWN++I+G +GQ D+
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-----NKDVVSWNAMISGLSHNGQGDE 507
Query: 513 AMQIFRRMQFFQIAPNSVTVLSILPA 538
A+++F M + P+ VT ++I+ A
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISA 533
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A + NG +AV + + G K T + +L +C D +E G++LH+ + +
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 116 G-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
G + F T LV MY+K G L++ARK FD ++ER++ W+++I + EE + L+
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M G +P++ + +L+AC LE G+ +H I+HG + + +++ +Y+KC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
G + +F+ +D V+WNA+I+G NG ++A + F+ M EG+EP VT+ +I
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 295 ASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
++ + G + M + GL P V ++ M+ ++ G+ A + +
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 160/334 (47%), Gaps = 40/334 (11%)
Query: 63 SNGPLSDAVAILDSL---AEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVG 116
+ G + +A+ + + E+GS + + +L S + +GR++H + GL+G
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
V + LV+MYSKC L+EA K+FD +RN TWSAM+ S+ E V LF
Sbjct: 255 FVA--LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M G P E+ + +L AC LE G+ +HS ++ G + +++ +YAK G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+ A+K F + ERD W ++I+G+ QN D E+A + M+ G+ P T ++ +
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 297 YNQLGRCDIAVDLMRKM--ESFGL---------------------------TP--DVYTW 325
+ L ++ + FGL TP DV +W
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
++MISG + G+ AL+L +ML G+EP+ +T
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVT 526
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 243/528 (46%), Gaps = 46/528 (8%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVGN-VNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+++L+ C + + G ++H + G+ +N L+ MY KC A KVFD M E
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
RN+ +WSA++ + + LF +M R G P+EF L+ACG LE G I
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H ++ G + V NS++ +Y+KCG + A+K+F+ + +R ++WNA+I GF G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 269 EQARKYFDAMQEEGVE--PGLVTWNILIASYNQLG-----------------RCDIA--- 306
+A F MQE ++ P T L+ + + G C +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 307 ----VDLMRK-------MESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
VDL K ++F + + +WSS+I G+ Q+G A+ L +++
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+ +S + ++ + VK+ + NS++DMY KCG ++ A++
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
F M +DV SW +I GY G K+ +F +M + P+ V + A+++ SG
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS---V 530
+ +LF ++ + IK V + ++ ++G+ +A + M I PN
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM---PIKPNVGIWQ 486
Query: 531 TVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
T+LS+ ++ GK+V +I +N + + +SN+ Y ++G
Sbjct: 487 TLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL----YGQAG 530
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 218/492 (44%), Gaps = 87/492 (17%)
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
L IL+ C + G + G +H ++ G ++ +N ++ +Y KC E A K+F SM
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW------------------ 290
ER+ V+W+A+++G NGD++ + F M +G+ P T+
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 291 -----------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFT 333
N L+ Y++ GR + A + R++ + + +W++MI+GF
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI----VDRSLISWNAMIAGFV 184
Query: 334 QKGRTYHALDLLRKMLLSGVE--PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL--- 388
G ALD M + ++ P+ T+ +IHG V+
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+TG SL+D+Y KCG L +A++ FD + E+ + SW+++I GY G +A LF +
Sbjct: 245 SSATITG-SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 449 MQDSDS---------------------------------PPNVVT--WNALITGYMQSGA 473
+Q+ +S P + T N+++ Y++ G
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
D+A F ++ ++V SW +I G+ + G K+++IF M I P+ V L
Sbjct: 364 VDEAEKCFAEMQ-----LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVS-EISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
++L A ++ K+ +E+ L + + + ++D ++G L ++ + D +P+
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 593 K-DIISWNIMLS 603
K ++ W +LS
Sbjct: 479 KPNVGIWQTLLS 490
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 211/498 (42%), Gaps = 77/498 (15%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNP 120
NG L ++++ + QG T+ L++C + +E G ++H +IG V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE- 143
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V LV MYSKCG ++EA KVF + +R+L +W+AMI + +D F M
Sbjct: 144 -VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 181 GF--LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM-C-SSIRVNNSIMAVYAKCGE 236
PDEF L +L+AC G + G+ IH +R G C SS + S++ +Y KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE---------------- 280
+ A+K F + E+ ++W+++I G+ Q G+ +A F +QE
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 281 ---------------------EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
G+E ++ N ++ Y + G D A +M+
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQ----L 376
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
DV +W+ +I+G+ + G ++ + +ML +EP+ + E+
Sbjct: 377 KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 436
Query: 380 -------HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIG 431
HGI ++ V +D+ + G L+ A+ + D M + +V W T++
Sbjct: 437 FSKLLETHGIKPRVEHYACV------VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL- 489
Query: 432 GYC--HAGF-CGKAYELFMKMQDSDSPPNVVTWNALI--TGYMQSGAEDQALDLFKRIEK 486
C H GK + D+ +P N V + L GY + L K ++K
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKK 549
Query: 487 DG-----KIKRNVASWNS 499
+ +I+R V + S
Sbjct: 550 EAGMSWVEIEREVHFFRS 567
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 251/566 (44%), Gaps = 67/566 (11%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEM 146
+ L++ I + +G+ HARI L NP F+ L+SMYSKCG L+ AR+VFD+M
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARI-LTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 147 RERNLFTWSAMIGACSREKSWEEVVD------LFYDMVRHGFL-PDEFLLPKILQACGKC 199
+R+L +W++++ A + +S E VV+ L + ++R + L +L+ C
Sbjct: 101 PDRDLVSWNSILAAYA--QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHS 158
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
G + H A + G+ V +++ +Y K G++ K LF+ M RD V WN ++
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
+ + G E+A A G+ P +T +L R +++SF
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-------ARISGDDSDAGQVKSFANG 271
Query: 320 PDVYTWSSMI------SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
D + S +I S + G+ L M+ S VE + +T
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
++H + +K+ L + NSLI+MY K A+ +FD M ERD+ SWN++I G
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTW-------------------------------- 461
G +A LFM++ P+ T
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 462 ----NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
ALI Y ++ +A LF+R D + +WN+++AG+ QS K +++F
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKS 577
M + T+ ++ L A + K++H A++ ++ VS+ ++D Y K
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 578 GNLMYSRRIFDGLPLKDIISWNIMLS 603
G++ ++ FD +P+ D ++W M+S
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMIS 591
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 234/535 (43%), Gaps = 46/535 (8%)
Query: 53 FMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA-- 110
F + L++ +G S + + E + +T++ +L + + D + +G+++H
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 111 -RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
++GL ++ V L++MY K AR VFD M ER+L +W+++I ++ E
Sbjct: 342 LKLGL--DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGRLIHSVAIRHGMCSSIRVNNSIM 228
V LF ++R G PD++ + +L+A + L + +H AI+ S V+ +++
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
Y++ M A+ LF+ + D V WNA++ G+ Q+ D + K F M ++G
Sbjct: 460 DAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGL------------------------------ 318
T + + L A++ +++ ++ +
Sbjct: 519 TLATVFKTCGFL----FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 319 -----TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
PD W++MISG + G A + +M L GV P+ T+
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
+IH +K++ +D G SL+DMY+KCG ++ A +F + ++ +WN ++ G
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
G + +LF +M+ P+ VT+ +++ SG +A + + D IK
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+ ++ L ++G +A + M A T+L+ + GK+V
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/561 (22%), Positives = 244/561 (43%), Gaps = 60/561 (10%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVF 143
+T +L+ C+ + H +IGL G+ FV LV++Y K G + E + +F
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGD--EFVAGALVNIYLKFGKVKEGKVLF 203
Query: 144 DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLE 203
+EM R++ W+ M+ A EE +DL G P+E L + + G D +
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSD 261
Query: 204 TGRLIHSVAIRH--GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD----SVTWNA 257
G+ + S A + S I N ++ Y G+ K F M E D VT+
Sbjct: 262 AGQ-VKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG 317
++ + + ++ + G++ L N LI Y +L + A + M
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-- 378
Query: 318 LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX-XXXXXX 376
D+ +W+S+I+G Q G A+ L ++L G++P+ T+
Sbjct: 379 --RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
++H +K++ V D +LID YS+ ++ A+ +F+ + D+ +WN ++ GY +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 437 GFCGKAYELFMKMQDSDSPPNVVT---------------------------------W-- 461
K +LF M + T W
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
+ ++ Y++ G A F I + +VA W ++I+G +++G++++A +F +M+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSI----PVPDDVA-WTTMISGCIENGEEERAFHVFSQMR 610
Query: 522 FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLM 581
+ P+ T+ ++ A + L A ++ ++IH AL+ N ++ V L+D YAK G++
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 582 YSRRIFDGLPLKDIISWNIML 602
+ +F + + +I +WN ML
Sbjct: 671 DAYCLFKRIEMMNITAWNAML 691
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 229/501 (45%), Gaps = 53/501 (10%)
Query: 44 SIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIE 103
SI S P + L L + + + G ++ +++ +L++ +
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 104 VGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS 162
G ELH + + +PFVET + MY+ CG ++ AR VFDEM R++ TW+ MI
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
R +E LF +M +PDE +L I+ ACG+ G++ R I+ I + +
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
+ +++ +YA G M A++ F+ M R+ A+++G+ + G ++ A+ FD +++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK- 307
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMIS-----GFTQKGR 337
LV W +I++Y + A+ + +M G+ PDV + S+IS G K +
Sbjct: 308 ---DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
H+ ++G+ ++S+ N+
Sbjct: 365 WVHSC----------------------------------IHVNGLESELSI------NNA 384
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
LI+MY+KCG L+A + +F+ M R+V SW+++I G A LF +M+ + PN
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
VT+ ++ G SG ++ +F + + I + + ++ F ++ +A+++
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 518 RRMQFFQIAPNSVTVLSILPA 538
M +A N V S++ A
Sbjct: 505 ESM---PVASNVVIWGSLMSA 522
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 171/436 (39%), Gaps = 119/436 (27%)
Query: 173 LFYDMVRH-GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
LFY +RH G D+F IL+A K L G +H VA + V M +Y
Sbjct: 97 LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMY 156
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
A C G I AR FD M
Sbjct: 157 ASC-------------------------------GRINYARNVFDEMSHR---------- 175
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
DV TW++MI + + G A L +M S
Sbjct: 176 -----------------------------DVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
V P D+++ N ++ + G++
Sbjct: 207 NVMP----------------------------------DEMILCN-IVSACGRTGNMRYN 231
Query: 412 QRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
+ I++ + E DV + ++ Y AG A E F KM S N+ A+++G
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM----SVRNLFVSTAMVSG 287
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
Y + G D A +F + EK +++ W ++I+ +++S +A+++F M I P
Sbjct: 288 YSKCGRLDDAQVIFDQTEK-----KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
+ V++ S++ A ANL K K +H C L SE+S++N LI+ YAK G L +R +F
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 588 DGLPLKDIISWNIMLS 603
+ +P ++++SW+ M++
Sbjct: 403 EKMPRRNVVSWSSMIN 418
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 155/658 (23%), Positives = 278/658 (42%), Gaps = 137/658 (20%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVN-PFVE 123
GPL V L+ G+ R +++++++C + GR LH + +G++ V
Sbjct: 2 GPLRQFVQNFRLLSGFGTDHR--VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIG----ACSREKSWEEVVDLFYDMVR 179
+++MY+KC + + +K+F +M + W+ ++ +C RE F D +
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK 119
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM-G 238
P +L C + GD G+ +HS I+ G+ V N+++++YAK G +
Sbjct: 120 ----PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT--------- 289
A F + ++D V+WNAII GF +N + A + F M +E EP T
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 290 ----------------------W--------NILIASYNQLGRCDIAVDLMRKMESFGLT 319
W N L++ Y ++GR + A L +M S
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS---- 291
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXE 378
D+ +W+ +I+G+ + A L ++ G V P+S+T+ E
Sbjct: 292 KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 379 IHGIGVKMS-LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA- 436
IH ++ S L++D GN+LI Y++ GD AA F +M +D+ SWN I+ + +
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 437 ----------------------------GFC------GKAYELFMK------MQDSDSPP 456
FC GK E+ + D + P
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD----- 511
NAL+ Y + G + A +F + + +R + S+NSL++G++ SG D
Sbjct: 472 ---LGNALLDAYAKCGNVEYAHKIFLGLSE----RRTLVSYNSLLSGYVNSGSHDDAQML 524
Query: 512 --------------------------KAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+A+ +FR +Q + PN+VT++++LP A L +
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASL 584
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
V++ H +R L +I + L+D YAK G+L ++ +F +D++ + M++
Sbjct: 585 HLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVA 641
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 221/546 (40%), Gaps = 91/546 (16%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRD---CIEVGRELHARIGLVG--NV 118
N ++DA + ++ ++ T N+L C D GR++H+ +
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
+ FV LVS Y + G + EA +F M ++L +W+ +I + W + LF+++V
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 179 RHGFL-PDEFLLPKILQACGKCGDLETGRLIHSVAIRHG-MCSSIRVNNSIMAVYAKCGE 236
G + PD + IL C + DL +G+ IHS +RH + V N++++ YA+ G+
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 237 MGFAKKLFKSMDERDSVTWNAIITG----------------------------------F 262
A F M +D ++WNAI+ F
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 263 CQN----GDIEQARKYF--DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
C N G +++ Y + + EP L N L+ +Y + G + A +
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKL--GNALLDAYAKCGNVEYAHKIF-----L 494
Query: 317 GLTP--DVYTWSSMISGFTQKG------------------------RTY-------HALD 343
GL+ + +++S++SG+ G R Y A+
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ R++ G+ PN++T+ + HG ++ L D L G +L+D+Y+
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG-TLLDVYA 613
Query: 404 KCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
KCG L+ A +F RD+ + ++ GY G +A ++ M +S+ P+ V
Sbjct: 614 KCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITT 673
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
++T +G L ++ I +K + + + + G+ D A +M
Sbjct: 674 MLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM--- 730
Query: 524 QIAPNS 529
+ PN+
Sbjct: 731 PVEPNA 736
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 68 SDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI--GLVGNVNPFVETK 125
++A+ + + +G + +T MNLL C + + R+ H I G +G++ ++
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR--LKGT 607
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ +Y+KCG L A VF R+L ++AM+ + +E + ++ M PD
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPD 667
Query: 186 EFLLPKILQACGKCGDLETGRLIH-SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+ +L AC G ++ G I+ S+ HGM ++ + + A+ G + A
Sbjct: 668 HVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFV 727
Query: 245 KSMD-ERDSVTWNAII 259
M E ++ W ++
Sbjct: 728 TQMPVEPNANIWGTLL 743
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 232/498 (46%), Gaps = 53/498 (10%)
Query: 107 ELHARIGLVGNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
++HA + GN+ + L++ + G +S ARKVFDE+ +R + +++MI SR
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
K+ +EV+ L+ M+ PD ++AC LE G + A+ G + + V
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+S++ +Y KCG+M A+ LF M +RD + W ++TGF Q G +A +++ MQ EG
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 285 PGLVTWNILIASYNQLGRCDIA----------------------VDLMRKMESFGLTPDV 322
V L+ + LG + VD+ K+ + V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 323 YT---------WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
++ W S+ISGF Q G A + + +M G +P+ +T+
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
+H +K ++D V T +L+DMYSKCG L +++ IF+ + +D+ WNT+I Y
Sbjct: 335 KTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
G + LF+KM +S+ P+ T+ +L++ SG +Q F + KI+ +
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPS 453
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
+ LI ++G+ ++A+ + NS + + LP + L++G
Sbjct: 454 EKHYVCLIDLLARAGRVEEALDMI----------NSEKLDNALPIWVALLSG-------- 495
Query: 554 CALRRNL-VSEISVSNIL 570
C RNL V +I+ + IL
Sbjct: 496 CINHRNLSVGDIAANKIL 513
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 45/346 (13%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LIAS ++G A + ++ G++ ++SMI +++ L L +M+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVS----VYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
++P+S T + V +DV +S++++Y KCG ++ A+
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD--------------------- 451
+F M +RDV W T++ G+ AG KA E + +MQ+
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 452 --------------SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
+ P NVV +L+ Y + G + A +F R+ + + SW
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-----MFKTAVSW 286
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
SLI+GF Q+G +KA + MQ P+ VT++ +L A + + + K + +HC L+
Sbjct: 287 GSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK 346
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
R+++ ++ + L+D Y+K G L SR IF+ + KD++ WN M+S
Sbjct: 347 RHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 33/310 (10%)
Query: 83 KVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-FVETKLVSMYSKCGHLSEA 139
K++P T+ +++C+ +E G + + G N FV + ++++Y KCG + EA
Sbjct: 111 KIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 140 RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKC 199
+F +M +R++ W+ M+ ++ + V+ + +M GF D ++ +LQA G
Sbjct: 171 EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDL 230
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
GD + GR +H R G+ ++ V S++ +YAK G + A ++F M + +V+W ++I
Sbjct: 231 GDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLI 290
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG--------RCDI------ 305
+GF QNG +A + MQ G +P LVT ++ + +Q+G C I
Sbjct: 291 SGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL 350
Query: 306 ----AVDLMRKMESFGL------------TPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
A LM G D+ W++MIS + G + L KM
Sbjct: 351 DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMT 410
Query: 350 LSGVEPNSIT 359
S +EP+ T
Sbjct: 411 ESNIEPDHAT 420
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 234/499 (46%), Gaps = 25/499 (5%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+++L+ +C D + R +HA+I G ++ V +LVS S + +F E
Sbjct: 32 FISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
RN F +A+I + +E V F M+R G PD P +L++ K G GR +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQ 264
H+ +++ + V S++ +YAK G++ A ++F+ +R + WN +I G+C+
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD--V 322
D+ A F +M E +W+ LI Y G +L R + F L P+ V
Sbjct: 209 AKDMHMATTLFRSMPERNSG----SWSTLIKGYVDSG------ELNRAKQLFELMPEKNV 258
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
+W+++I+GF+Q G A+ +ML G++PN T+ IHG
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
+ + D G +L+DMY+KCG+L+ A +F M +D+ SW +I G+ G +A
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQA 378
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
+ F +M S P+ V + A++T + S D L+ F + D I+ + + ++
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS 562
++G+ ++A ++ M I P+ T ++ A ++ + + L L
Sbjct: 439 LLGRAGKLNEAHELVENM---PINPDLTTWAALYRACKAHKGYRRAESVSQNLL--ELDP 493
Query: 563 EISVSNILID-SYAKSGNL 580
E+ S I +D ++A GN+
Sbjct: 494 ELCGSYIFLDKTHASKGNI 512
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 17/314 (5%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
L++ + L D ++ + R E + + +++I G T+ R ++ ML G
Sbjct: 66 LVSCSSLLKSPDYSLSIFRNSEE----RNPFVLNALIRGLTENARFESSVRHFILMLRLG 121
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
V+P+ +T +H +K + D SL+DMY+K G L+ A
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAF 181
Query: 413 RIF----DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
++F D + + + WN +I GYC A A LF M + +S +W+ LI GY
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG----SWSTLIKGY 237
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ SG ++A LF+ + + +NV SW +LI GF Q+G + A+ + M + PN
Sbjct: 238 VDSGELNRAKQLFELMPE-----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
T+ ++L A + A IH L + + ++ L+D YAK G L + +F
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 589 GLPLKDIISWNIML 602
+ KDI+SW M+
Sbjct: 353 NMNHKDILSWTAMI 366
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 206/450 (45%), Gaps = 44/450 (9%)
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVN--PFVETKLVSMYSKCGHLSEARKVFDEM 146
Y++ LQ C + + LHA I +G V P T LV++Y KCG S A +VFDEM
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANT-LVNVYGKCGAASHALQVFDEM 64
Query: 147 RERNLFTWSAMIGACSREK-SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
R+ W++++ A ++ S + + G PD+F+ +++AC G ++ G
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
R +H I + V +S++ +YAKCG + AK +F S+ +++++
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS----------- 173
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
W +++ Y + GR + A++L R + ++Y+W
Sbjct: 174 ------------------------WTAMVSGYAKSGRKEEALELFRILP----VKNLYSW 205
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEP-NSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+++ISGF Q G+ A + +M V+ + + + ++HG+ +
Sbjct: 206 TALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVI 265
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
+ V N+LIDMY+KC D+ AA+ IF M RDV SW ++I G G KA
Sbjct: 266 ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALA 325
Query: 445 LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
L+ M PN VT+ LI G ++ +LF+ + KD I+ ++ + L+
Sbjct: 326 LYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLL 385
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLS 534
+SG D+A + M F P +LS
Sbjct: 386 GRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 167/412 (40%), Gaps = 112/412 (27%)
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
LQ C + L T + +H+ ++ G+ + N+++ VY KC
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKC------------------ 51
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
G A + FD M + W ++ + NQ + +
Sbjct: 52 -------------GAASHALQVFDEMPHRD----HIAWASVLTALNQANLSGKTLSVFSS 94
Query: 313 MESFG-LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
+ S L PD + +S+++ G H
Sbjct: 95 VGSSSGLRPDDFVFSALVKACANLGSIDHG------------------------------ 124
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIG 431
++H + +D + +SL+DMY+KCG L +A+ +FD + +
Sbjct: 125 -----RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK---------- 169
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
N ++W A+++GY +SG +++AL+LF+ +
Sbjct: 170 -------------------------NTISWTAMVSGYAKSGRKEEALELFRILPV----- 199
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLS-ILPAFANLVAGKKVKE 550
+N+ SW +LI+GF+QSG+ +A +F M+ ++ VLS I+ A ANL A ++
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQ 259
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+H + S + +SN LID YAK +++ ++ IF + +D++SW ++
Sbjct: 260 VHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
N L+ Y + GA AL +F D R+ +W S++ Q+ K + +F +
Sbjct: 42 NTLVNVYGKCGAASHALQVF-----DEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVG 96
Query: 522 FFQ-IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+ P+ +++ A ANL + +++HC + ++ V + L+D YAK G L
Sbjct: 97 SSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 581 MYSRRIFDGLPLKDIISWNIMLS 603
++ +FD + +K+ ISW M+S
Sbjct: 157 NSAKAVFDSIRVKNTISWTAMVS 179
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 238/567 (41%), Gaps = 108/567 (19%)
Query: 89 YMNLLQSCIDRDCIEVG-RELHARIGLVGNVNP-FVETKLVSMYSKCGHLSEARKVFDEM 146
+ LL SCI + R +HA + G N F++ +L+ YSKCG L + R+VFD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 147 RERNLFTWSAMIGACSR------------------EKSW-------------EEVVDLFY 175
+RN++TW++++ ++ + +W EE + F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M + GF+ +E+ +L AC D+ G +HS+ + S + + ++++ +Y+KCG
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ A+++F M +R+ V+WN++IT F QNG +A F M E VEP VT +I+
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 296 SYNQLG------------------RCDIA-----VDLMRKMES-------FGLTP--DVY 323
+ L R DI VD+ K F P +V
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 324 TWSSMISG-------------------------------FTQKGRTYHALDLLRKMLLSG 352
+SMISG +TQ G AL L +
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIH------GIGVKMSLVDDVLTGNSLIDMYSKCG 406
V P + + H G + DD+ GNSLIDMY KCG
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
+E +F M ERD SWN +I G+ G+ +A ELF +M +S P+ +T +++
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
+G ++ F + +D + + ++ ++G ++A + M +
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM---PMQ 558
Query: 527 PNSVTVLSILPA---FANLVAGKKVKE 550
P+SV S+L A N+ GK V E
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAE 585
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 203/465 (43%), Gaps = 84/465 (18%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
+++ GF + F+ +++ A KCG LE GR + + +I NS++ K G
Sbjct: 46 VIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGF 101
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV------------- 283
+ A LF+SM ERD TWN++++GF Q+ E+A YF M +EG
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 284 -------------------EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
P L I A + +C D R + G +V +
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVS 220
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+S+I+ F Q G ALD+ + ML S VEP+ +T+ E+HG V
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 385 KM-SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
K L +D++ N+ +DMY+KC ++ A+ IFD M R
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR---------------------- 318
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
NV+ ++I+GY + + A +F ++ + RNV SWN+LIAG
Sbjct: 319 -------------NVIAETSMISGYAMAASTKAARLMFTKMAE-----RNVVSWNALIAG 360
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV-- 561
+ Q+G+ ++A+ +F ++ + P + +IL A A+L + H L+
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 562 ----SEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+I V N LID Y K G + +F + +D +SWN M+
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 47/337 (13%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNV--N 119
NGP +A+ + + E S+V P +T +++ +C I+VG+E+H R+ + +
Sbjct: 231 NGPAVEALDVFQMMLE--SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND 288
Query: 120 PFVETKLVSMYSKCGHLSEARKVFD-------------------------------EMRE 148
+ V MY+KC + EAR +FD +M E
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
RN+ +W+A+I ++ EE + LF + R P + IL+AC +L G
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 209 HSVAIRHGMC------SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
H ++HG I V NS++ +Y KCG + +F+ M ERD V+WNA+I GF
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 263 CQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPD 321
QNG +A + F M E G +P +T ++++ G + M FG+ P
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
++ M+ + G A ++ +M + +P+S+
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPM---QPDSV 562
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 72/292 (24%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT---------- 428
+H +K +++ N LID YSKCG LE +++FD M +R++Y+WN+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 429 ---------------------IIGGYCHAGFCGKAYELFMKMQD---------------- 451
++ G+ C +A F M
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 452 -----------------SDSP--PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
+ SP +V +AL+ Y + G + A +F D R
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF-----DEMGDR 216
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIH 552
NV SWNSLI F Q+G +A+ +F+ M ++ P+ VT+ S++ A A+L A K +E+H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 553 CCALRRN-LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ + L ++I +SN +D YAK + +R IFD +P++++I+ M+S
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/549 (24%), Positives = 239/549 (43%), Gaps = 56/549 (10%)
Query: 27 EFIASTRVHANSNYVSMS-----IRSLPYPKFM--DAQLNQLCSNGPLSDAVAILDSLAE 79
EF +T + A SN +S RS P + +A ++ C +G +A + +
Sbjct: 59 EFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQS 118
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
G K T ++L+ C + G ++H G +++ V L++MY++C +SE
Sbjct: 119 DGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISE 178
Query: 139 ARKVFDEMR-ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
A +F+ M E+N TW++M+ S+ + ++ F D+ R G +++ P +L AC
Sbjct: 179 AEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
G +H ++ G ++I V ++++ +YAKC EM A+ L + M+ D V+WN+
Sbjct: 239 SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS 298
Query: 258 IITGFCQNGDIEQARKYFDAMQEEG--------------------------------VEP 285
+I G + G I +A F M E V+
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 286 GLVTW----NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G T+ N L+ Y + G D A+ + M + DV +W+++++G T G A
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGM----IEKDVISWTALVTGNTHNGSYDEA 414
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
L L M + G+ P+ I ++HG +K + NSL+ M
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTM 474
Query: 402 YSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS-PPNVVT 460
Y+KCG LE A IF+ M RD+ +W +I GY G A F M+ P
Sbjct: 475 YTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ +I + +SG + L ++E ++ + W +++A + G + + + +
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQME----VEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 521 QFFQIAPNS 529
++ PN+
Sbjct: 591 --MELEPNN 597
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 208/449 (46%), Gaps = 79/449 (17%)
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
N+++ Y+ + A+KLF+S +++++WNA+I+G+C++G +A F MQ +G++
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 285 PGLVTW-----------------------------------NILIASYNQLGRCDIAVDL 309
P T N L+A Y Q R A L
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
ME G +V TW+SM++G++Q G + A++ R + G + N T
Sbjct: 183 FETME--GEKNNV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
++H VK ++ ++LIDMY+KC ++E+A+ + + M DV SWN++
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSM 299
Query: 430 IGGYCHAGFCGKAYELFMKMQDSD------SPPNVVTW---------------------- 461
I G G G+A +F +M + D + P+++
Sbjct: 300 IVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG 359
Query: 462 --------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
NAL+ Y + G D AL +F +G I+++V SW +L+ G +G D+A
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVF-----EGMIEKDVISWTALVTGNTHNGSYDEA 414
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
+++F M+ I P+ + S+L A A L + +++H ++ S +SV+N L+
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTM 474
Query: 574 YAKSGNLMYSRRIFDGLPLKDIISWNIML 602
Y K G+L + IF+ + ++D+I+W ++
Sbjct: 475 YTKCGSLEDANVIFNSMEIRDLITWTCLI 503
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 217/497 (43%), Gaps = 105/497 (21%)
Query: 131 SKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK------------------SWE---- 168
SK G + EAR++FD+M ER+ FTW+ MI A S + SW
Sbjct: 39 SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALIS 98
Query: 169 ---------EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS 219
E +LF++M G P+E+ L +L+ C L G IH I+ G
Sbjct: 99 GYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL 158
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+ V N ++A+YA+C + A+ LF++M+ E+++VTW +++TG+ QNG +A + F +
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLM-------------------------RKM 313
+ EG + T+ ++ + + C + V + R+M
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Query: 314 ESF-----GL-TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX-X 366
ES G+ DV +W+SMI G ++G AL + +M ++ + T+
Sbjct: 279 ESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCF 338
Query: 367 XXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSW 426
H + VK L N+L+DMY+K G +++A ++F+ M E+DV SW
Sbjct: 339 ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQ-----------------------------------D 451
++ G H G +A +LF M+
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
S P ++ N+L+T Y + G+ + A +F +E R++ +W LI G+ ++G +
Sbjct: 459 SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME-----IRDLITWTCLIVGYAKNGLLE 513
Query: 512 KAMQIFRRMQ-FFQIAP 527
A + F M+ + I P
Sbjct: 514 DAQRYFDSMRTVYGITP 530
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 180/390 (46%), Gaps = 40/390 (10%)
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
S +R + N ++ ++G +++AR+ FD M E TWN +I +Y+ R
Sbjct: 22 SYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDE----FTWNTMIVAYSNSRRLSD 77
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
A L R + +W+++ISG+ + G A +L +M G++PN T+
Sbjct: 78 AEKLFRS----NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLR 133
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY-ERDVY 424
+IHG +K DV N L+ MY++C + A+ +F+ M E++
Sbjct: 134 MCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV 193
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG----------------Y 468
+W +++ GY GF KA E F ++ + N T+ +++T
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 469 MQSG------AEDQALDLFKRIEK--------DGKIKRNVASWNSLIAGFLQSGQKDKAM 514
++SG + +D++ + + +G +V SWNS+I G ++ G +A+
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFA-NLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
+F RM + + T+ SIL FA + K HC ++ + V+N L+D
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDM 373
Query: 574 YAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
YAK G + + ++F+G+ KD+ISW +++
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVT 403
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 218/458 (47%), Gaps = 54/458 (11%)
Query: 105 GRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGAC 161
G ++H R G G + V+ ++ MY+ LS ARK+FDEM ER++ +WS +I +
Sbjct: 144 GEKIHGYVIRSGFCGISS--VQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY 200
Query: 162 SREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM-CS 219
+ K + LF +MV PD + +L+AC D++ GR +H +IR G +
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
+ V NS++ +Y+K ++ A ++F R+ V+WN+I+ GF N ++A + F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 280 EEGVEPGLVT-----------------------------------WNILIASYNQLGRCD 304
+E VE VT + LI +Y D
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
A ++ M DV + S+MISG GR+ A+ + M + PN+ITV
Sbjct: 381 DAGTVLDSMT----YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLL 433
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
HGI ++ SL ++D+ G S++D Y+KCG +E A+R FD + E+++
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
SW II Y G KA LF +M+ PN VT+ A ++ G + L +FK
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKS 553
Query: 484 -IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+E+D K ++ ++ ++ ++G+ D A+++ + +
Sbjct: 554 MVEEDH--KPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 226/516 (43%), Gaps = 94/516 (18%)
Query: 155 SAMIGACSREKSWEEVVDLFYDMVRHGF-LPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
S+ I S W EVV + ++ R G D F+ P + +AC K L G
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG-------- 64
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARK 273
NSI Y KCG++ + F M+ RDSV+WN I+ G G E+
Sbjct: 65 -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 274 YFDAMQEEGVEPGLVTWNILIASYNQL--------------GRCDIAV------------ 307
+F ++ G EP T ++I + L G C I+
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS 173
Query: 308 DLM--RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXX 364
D + RK+ DV +WS +I + Q L L ++M+ EP+ +TV
Sbjct: 174 DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
+HG ++ + DV NSLIDMYSK D+++A R+FD R++
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKM-QDS------------------DSP--------- 455
SWN+I+ G+ H +A E+F M Q++ + P
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 456 -------PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
N V ++LI Y D A + D ++V S +++I+G +G
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL-----DSMTYKDVVSCSTMISGLAHAG 408
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL-VSEISVS 567
+ D+A+ IF M+ PN++TV+S+L A + + K H A+RR+L +++ISV
Sbjct: 409 RSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG 465
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++D+YAK G + +RR FD + K+IISW +++S
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIIS 501
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 221/540 (40%), Gaps = 80/540 (14%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F + Y KCG L + FD M R+ +W+ ++ EE + F +
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
GF P+ L ++ AC G IH IR G C V NSI+ +YA + A
Sbjct: 122 GFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM-QEEGVEPGLVTWNILIASYN- 298
+KLF M ERD ++W+ +I + Q+ + K F M E EP VT ++ +
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 299 ----QLGR------------------CDIAVDLMRK-------MESFGLTP--DVYTWSS 327
+GR C+ +D+ K F T ++ +W+S
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+++GF R AL++ M+ VE + +TV IHG+ ++
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
+ + +SLID Y+ C ++ A + D M +DV S +T+I G HAG +A +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 448 KMQDSDSPPNVVT------------------W------------------NALITGYMQS 471
M+D+ PN +T W +++ Y +
Sbjct: 419 HMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
GA + A F +I ++N+ SW +I+ + +G DKA+ +F M+ PN+VT
Sbjct: 476 GAIEMARRTFDQI-----TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
L+ L A + KK I + + + + ++D +++G + + + LP
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 221/527 (41%), Gaps = 75/527 (14%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHL 136
+K P +T ++L++C + I+VGR +H R G + FV L+ MYSK +
Sbjct: 220 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF-DLADVFVCNSLIDMYSKGFDV 278
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC 196
A +VFDE RN+ +W++++ + ++E +++F+ MV+ DE + +L+ C
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
+ IH V IR G S+ +S++ Y C + A + SM +D V+ +
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
+I+G G ++A F M++ P +T + L C ++ DL +
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRD---TPNAIT------VISLLNACSVSADLRTSKWAH 449
Query: 317 GLT-------PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
G+ D+ +S++ + + G A+++ R+ E N
Sbjct: 450 GIAIRRSLAINDISVGTSIVDAYAKCG----AIEMARRTFDQITEKN------------- 492
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYS 425
+++ +I Y+ G + A +FD M Y + +
Sbjct: 493 ----------------------IISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+ + H G K +F M + D P++ ++ ++ ++G D A++L K +
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+D +K ++W ++++G + K + I + + + L A + A
Sbjct: 591 ED--VKAGASAWGAILSG---CRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAE 645
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
K +++ A+ R LV E V + S + GNL ++R G L
Sbjct: 646 KSWEDV---AMMRRLVKERKVRVVAGYSMVREGNL--AKRFLAGDKL 687
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
++ L G +A++I + + + + I+ +N D + + R L N
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
+ V T +V Y+KCG + AR+ FD++ E+N+ +W+ +I A + ++ + LF +M
Sbjct: 461 -DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
+ G+ P+ L AC G ++ G +I + S++ + I+ + ++ GE+
Sbjct: 520 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI 579
Query: 238 GFAKKLFKSMDE---RDSVTWNAIITGFCQN 265
A +L K++ E + W AI++G C+N
Sbjct: 580 DTAVELIKNLPEDVKAGASAWGAILSG-CRN 609
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 221/502 (44%), Gaps = 47/502 (9%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF- 121
+NG DA+ + E G Y ++++C + D + VGR +G + F
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR---VTLGFLMKTGHFE 199
Query: 122 ----VETKLVSMYSKC-GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
V L+ M+ K A KVFD+M E N+ TW+ MI C + E + F D
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC-- 234
MV GF D+F L + AC + +L G+ +HS AIR G+ + S++ +YAKC
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSA 317
Query: 235 -GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI-EQARKYFDAMQEEG-VEPGLVTWN 291
G + +K+F M++ ++W A+ITG+ +N ++ +A F M +G VEP T++
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR-------------- 337
+ L + ++ + GL + +S+IS F + R
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 338 ---TYH--------------ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+Y+ A LL ++ + ++ T +IH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
VK+ L + N+LI MYSKCG ++ A R+F+ M R+V SW ++I G+ GF
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+ E F +M + PN VT+ A+++ G + F + +D KIK + + +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 501 IAGFLQSGQKDKAMQIFRRMQF 522
+ ++G A + M F
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPF 639
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/620 (23%), Positives = 274/620 (44%), Gaps = 91/620 (14%)
Query: 65 GPLSDAVAILDSLAEQGSKVRP---ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP- 120
G L AV+ LD +A G +RP +T+ +LL+SCI +G+ +HAR+ + ++ P
Sbjct: 40 GDLRGAVSALDLMARDG--IRPMDSVTFSSLLKSCIRARDFRLGKLVHARL-IEFDIEPD 96
Query: 121 -FVETKLVSMYSKCGHLSEARKVFDEMR---ERNLFTWSAMIGACSREKSWEEVVDLFYD 176
+ L+S+YSK G ++A VF+ MR +R++ +WSAM+ + + +F +
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS-IRVNNSIMAVYAKCG 235
+ G +P+++ +++AC + GR+ ++ G S + V S++ ++ K G
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-G 215
Query: 236 EMGF--AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
E F A K+F M E + VTW +IT Q G +A ++F M G E T + +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 294 IASYNQLGRCDIA--------------------VDLMRKMESFGLTPD------------ 321
++ +L + VD+ K + G D
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 322 VYTWSSMISGFTQK-GRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEI 379
V +W+++I+G+ + A++L +M+ G VEPN T ++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
G K L + NS+I M+ K +E AQR F+ + E+++ S+NT + G C
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 440 GKAYELFMKMQDSDSPPNVVTW-----------------------------------NAL 464
+A++L ++ + + + T+ NAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I+ Y + G+ D A +F +E RNV SW S+I GF + G + ++ F +M
Sbjct: 516 ISMYSKCGSIDTASRVFNFME-----NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 525 IAPNSVTVLSILPAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+ PN VT ++IL A +++ + + + + + ++ ++D ++G L +
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 584 RRIFDGLPLK-DIISWNIML 602
+ +P + D++ W L
Sbjct: 631 FEFINTMPFQADVLVWRTFL 650
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 221/504 (43%), Gaps = 84/504 (16%)
Query: 177 MVRHGFLP-DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M R G P D +L++C + D G+L+H+ I + + NS++++Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 236 EMGFAKKLFKSM---DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
+ A+ +F++M +RD V+W+A++ + NG A K F E G+ P +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 293 LI-----ASYNQLGRCDIA------------------VDLMRKME-SFGLTPDVY----- 323
+I + + +GR + +D+ K E SF V+
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 324 ----TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
TW+ MI+ Q G A+ M+LSG E + T+ ++
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKC---GDLEAAQRIFDMMYERDVYSWNTIIGGYC-H 435
H ++ LVDDV SL+DMY+KC G ++ +++FD M + V SW +I GY +
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 436 AGFCGKAYELFMKM-QDSDSPPNVVTW--------------------------------- 461
+A LF +M PN T+
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 462 --NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
N++I+ +++S + A F+ + + +N+ S+N+ + G ++ ++A ++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSE-----KNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
+ ++ ++ T S+L AN+ + +K ++IH ++ L V N LI Y+K G+
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 580 LMYSRRIFDGLPLKDIISWNIMLS 603
+ + R+F+ + +++ISW M++
Sbjct: 525 IDTASRVFNFMENRNVISWTSMIT 548
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-----DVYSWNTIIGGYCHAGFCGK 441
S+ + + + LI + GDL A D+M D ++++++ A
Sbjct: 21 SVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRL 80
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
+ ++ + D P+ V +N+LI+ Y +SG +A D+F+ + + GK R+V SW++++
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK--RDVVSWSAMM 138
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN--------LVAGKKVKEIHC 553
A + +G++ A+++F + PN +++ A +N + G +K H
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH- 197
Query: 554 CALRRNLVSEISVSNILIDSYAKSGN-LMYSRRIFDGLPLKDIISWNIMLSQ 604
S++ V LID + K N + ++FD + ++++W +M+++
Sbjct: 198 ------FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 239/522 (45%), Gaps = 22/522 (4%)
Query: 31 STRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYM 90
+TR H S S S ++ L + S G L AV +++ G K +
Sbjct: 10 TTRSHVGSTASSNSWSTIV------PALARFGSIGVLRAAVELIN----DGEKPDASPLV 59
Query: 91 NLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRER 149
+LL+ + + + R+LH + G V N + L+ Y L +A KVFDEM +
Sbjct: 60 HLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
++ +W++++ + ++E + LF ++ R P+EF L AC + G IH
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 210 SVAIRHGM-CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
S ++ G+ ++ V N ++ +Y KCG M A +F+ M+E+D+V+WNAI+ +NG +
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
E +F M P VT+N LI ++ + G + A ++ M + P+ +W+++
Sbjct: 240 ELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PNSSSWNTI 291
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
++G+ ++ A + KM SGV + ++ IH K+ L
Sbjct: 292 LTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL 351
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF-- 446
V+ ++LIDMYSKCG L+ A+ +F M +++ WN +I GY G +A +LF
Sbjct: 352 DSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
+K + P N L + L F+ + + +IK +V SLI Q
Sbjct: 412 LKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQ 471
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
G+ +A Q+ + F +L A +L A K V
Sbjct: 472 RGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTV 513
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 194/467 (41%), Gaps = 92/467 (19%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLF------------YDMVRHGFLPDEFLLPKILQACG 197
N FT + +G+ + SW +V +++ G PD L +L+ G
Sbjct: 7 NAFTTRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSG 66
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
G + R +H +HG S+ R++NS+M + +K+ D
Sbjct: 67 NYGYVSLCRQLHGYVTKHGFVSNTRLSNSLM-------------RFYKTSD--------- 104
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG 317
+E A K FD M +
Sbjct: 105 ---------SLEDAHKVFDEMPD------------------------------------- 118
Query: 318 LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
PDV +W+S++SG+ Q GR + L ++ S V PN +
Sbjct: 119 --PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGA 176
Query: 378 EIHGIGVKMSLVD-DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
IH VK+ L +V+ GN LIDMY KCG ++ A +F M E+D SWN I+
Sbjct: 177 CIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRN 236
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
G F +M + P+ VT+N LI +++SG + A + + N +S
Sbjct: 237 GKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP-----NSSS 287
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
WN+++ G++ S + +A + F +M + + ++ +L A A L IH CA
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ L S + V++ LID Y+K G L ++ +F +P K++I WN M+S
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 140/614 (22%), Positives = 253/614 (41%), Gaps = 146/614 (23%)
Query: 93 LQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEAR----------- 140
L SC + + GR++H R+ G + N ++ +++MY+KC L++A
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 141 --------------------KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
K+FD M ER+ +++ +I ++ W E ++LF +M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G + +E L ++ AC G + R++ S+AI+ + + V+ +++ +Y C + A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
+KLF M ER+ VTWN ++ G+ + G IEQA + FD + E+
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK------------------- 268
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
D+ +W +MI G +K + AL +ML G++P+ + +
Sbjct: 269 --------------------DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVK-------------------------------MSLV 389
++HG VK S+
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
D + + N+LI + K G +E A+ +FD +++D++SWN +I GY + A LF +M
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 450 QDSDS------------------------------------PPNVVTWNALITGYMQSGA 473
S PPN A+I Y + G+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
+ AL++F + + ++ WN++I G G A+ ++ +Q I PNS+T +
Sbjct: 489 IETALNIFHQTKNIS--SSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFV 546
Query: 534 SILPA--FANLVA-GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
+L A A LV GK E + +I ++D K+G L ++ + +
Sbjct: 547 GVLSACCHAGLVELGKTYFE--SMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Query: 591 PLK-DIISWNIMLS 603
P+K D++ W ++LS
Sbjct: 605 PVKADVMIWGMLLS 618
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 213/498 (42%), Gaps = 85/498 (17%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDR----DCIEVGRELHARIGLVGNVN 119
N S+A+ + + G + +T ++ +C DC + + L ++ L G V
Sbjct: 151 NNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC-RMLQSLAIKLKLEGRV- 208
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWS------------------------ 155
FV T L+ MY C L +ARK+FDEM ERNL TW+
Sbjct: 209 -FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
Query: 156 -------AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
MI C R+ +E + + +M+R G P E ++ +L A + G +
Sbjct: 268 KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL 327
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H ++ G + +I+ YA ++ A + F++ + + NA+I GF +NG +
Sbjct: 328 HGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMV 387
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
EQAR+ FD ++ D+++W++M
Sbjct: 388 EQAREVFDQTHDK---------------------------------------DIFSWNAM 408
Query: 329 ISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
ISG+ Q AL L R+M+ S V+P++IT+ H + S
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY-LNFS 467
Query: 388 LV--DDVLTGNSLIDMYSKCGDLEAAQRIFDM---MYERDVYSWNTIIGGYCHAGFCGKA 442
+ +D LT ++IDMY+KCG +E A IF + + WN II G G A
Sbjct: 468 TIPPNDNLTA-AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
+L+ +Q PN +T+ +++ +G + F+ ++ D I+ ++ + ++
Sbjct: 527 LDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVD 586
Query: 503 GFLQSGQKDKAMQIFRRM 520
++G+ ++A ++ ++M
Sbjct: 587 LLGKAGRLEEAKEMIKKM 604
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 50/419 (11%)
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
E L L +C D+ GR IH ++ G+ S+ + NS++ +YAKC + A+ +F+
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
+ DS ++N ++ G+ ++ + A K FD M E V++ LI Y Q +
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC----VSYTTLIKGYAQNNQWSE 156
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
A++L R+M + G+ + T +++IS + G + +ML S
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC-----RMLQS-------------- 197
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
+ +K+ L V +L+ MY C L+ A+++FD M ER++ +
Sbjct: 198 ----------------LAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
WN ++ GY AG +A ELF ++ + D +V+W +I G ++ D+AL + +
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKD----IVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA-FANLVA 544
+ G +K + L++ +S K +Q+ I L A + A
Sbjct: 298 RCG-MKPSEVMMVDLLSASARSVGSSKGLQLHG-----TIVKRGFDCYDFLQATIIHFYA 351
Query: 545 GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ ++ I+ N LI + K+G + +R +FD KDI SWN M+S
Sbjct: 352 VSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMIS 410
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
S+V+P IT +++ + +E G+ H + N + ++ MY+KCG +
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 139 ARKVFDEMRERNLFT---WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
A +F + + + T W+A+I + + +DL+ D+ P+ +L A
Sbjct: 492 ALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSA 551
Query: 196 CGKCGDLETGRL-IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER-DSV 253
C G +E G+ S+ HG+ I+ ++ + K G + AK++ K M + D +
Sbjct: 552 CCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVM 611
Query: 254 TWNAIITGFCQNGDIE 269
W +++ +G++E
Sbjct: 612 IWGMLLSASRTHGNVE 627
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 212/452 (46%), Gaps = 45/452 (9%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
T L+ Y + G + EAR +FDEM +R++ W+AMI + + F++MV+ G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG-EMGFAKK 242
P+EF L +L++C L G L+H V ++ GM S+ V+N++M +YA C M A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 243 LFKSMDERDSVTWNAIITGFCQNGD----------------------------------- 267
+F+ + ++ VTW +ITGF GD
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+ ++ ++ + G + L N ++ Y + G A +ME D+ TW++
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED----KDLITWNT 284
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+IS ++ + AL + ++ G PN T ++HG +
Sbjct: 285 LISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
+V N+LIDMY+KCG++ +QR+F +++ R++ SW +++ GY G+ +A ELF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
KM S P+ + + A+++ +G ++ L F +E + I + +N ++ +
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+G+ +A ++ RM F P+ T +IL A
Sbjct: 464 AGKIGEAYELVERMPF---KPDESTWGAILGA 492
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 141/272 (51%), Gaps = 4/272 (1%)
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
+ ++V P +++ D + G+++HA + G N V ++ +Y +CG+LSE
Sbjct: 207 ENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSE 266
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
A+ F EM +++L TW+ +I R S E ++ +F GF+P+ + ++ AC
Sbjct: 267 AKHYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM-DERDSVTWNA 257
L G+ +H R G ++ + N+++ +YAKCG + ++++F + D R+ V+W +
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-F 316
++ G+ +G +A + FD M G+ P + + ++++ G + + MES +
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
G+ PD ++ ++ + G+ A +L+ +M
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 49/348 (14%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI SY + G + A L +M DV W++MI+G+ A + +M+ G
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPD----RDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG-DLEAA 411
PN T+ +HG+ VK+ + + N++++MY+ C +EAA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 412 QRIF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM--QDSDSPPNVVT-------- 460
IF D+ + DV +W T+I G+ H G +++ +M ++++ P +T
Sbjct: 167 CLIFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 461 -------------------------WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
N+++ Y + G +A F +E +++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED-----KDLI 280
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA 555
+WN+LI+ L+ +A+ +F+R + PN T S++ A AN+ A +++H
Sbjct: 281 TWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 556 LRRNLVSEISVSNILIDSYAKSGNLMYSRRIF-DGLPLKDIISWNIML 602
RR + ++N LID YAK GN+ S+R+F + + ++++SW M+
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 183/432 (42%), Gaps = 86/432 (19%)
Query: 77 LAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKC 133
+ +QG+ T ++L+SC + + G +H ++G+ G++ +V+ +++MY+ C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSL--YVDNAMMNMYATC 159
Query: 134 GHLSEAR-KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKI 192
EA +F +++ +N TW+ +I + + ++ M+ + +
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
++A + TG+ IH+ I+ G S++ V NSI+ +Y +CG + AK F M+++D
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL----------GR 302
+TWN +I+ + D +A F + +G P T+ L+A+ + GR
Sbjct: 280 ITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 303 ---------CDIAVDLMRKMESFGLTPD-------------VYTWSSMISGFTQKGRTYH 340
++A L+ G PD + +W+SM+ G+ G
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A++L KM+ SG+ P+ I +++
Sbjct: 399 AVELFDKMVSSGIRPDRIVFM-----------------------------------AVLS 423
Query: 401 MYSKCGDLEAAQRIFDMMY-------ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
G +E + F++M +RD+Y N ++ AG G+AYEL +M
Sbjct: 424 ACRHAGLVEKGLKYFNVMESEYGINPDRDIY--NCVVDLLGRAGKIGEAYELVERMP--- 478
Query: 454 SPPNVVTWNALI 465
P+ TW A++
Sbjct: 479 FKPDESTWGAIL 490
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 68 SDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKL 126
S+A+ + QG T+ +L+ +C + + G++LH RI G N N + L
Sbjct: 295 SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL 354
Query: 127 VSMYSKCGHLSEARKVFDEMRE-RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
+ MY+KCG++ ++++VF E+ + RNL +W++M+ E V+LF MV G PD
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 186 EFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+ +L AC G +E G + + + +G+ + N ++ + + G++G A +L
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELV 474
Query: 245 KSMDER-DSVTWNAIITGFCQ----NGDIEQ--ARKYFD 276
+ M + D TW AI+ G C+ NG I + ARK +
Sbjct: 475 ERMPFKPDESTWGAIL-GACKAHKHNGLISRLAARKVME 512
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 38/247 (15%)
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
+L N ++ + K G +E A+ +FD M +RDV +W +I GY + + +A+E F +M
Sbjct: 46 ILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 452 SDSPPN---------------VVTWNALITGYM-QSGAE------DQALDLFKR------ 483
+ PN V+ + AL+ G + + G E + ++++
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 484 ----IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM--QFFQIAPNSVTVLSILP 537
I +D K+K +V +W +LI GF G ++++++M + ++ P +T+ +
Sbjct: 165 AACLIFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVR 221
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A A++ + K+IH ++R S + V N ++D Y + G L ++ F + KD+I+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 598 WNIMLSQ 604
WN ++S+
Sbjct: 282 WNTLISE 288
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 207/427 (48%), Gaps = 35/427 (8%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ +Y K G + ARK+FD + +R++ +W+AMI SR + + LF +M R +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMAVYAKCGEMGFAKKLF 244
+F +L++C G L+ G IH ++ G C+ ++ V ++++++YA+CG+M A+ F
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHG-SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-------- 296
SM ERD V+WNA+I G+ N + + F M EG +P T+ L+ +
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLE 231
Query: 297 -YNQLGRCDIAVDLMR----------------------KMESFGLTPDVYTWSSMISGFT 333
++L I + R K+ D+ + +++I+GF+
Sbjct: 232 IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFS 291
Query: 334 QKGR-TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-D 391
Q+ T A D+ + M+ + + + V +IHG +K S + D
Sbjct: 292 QQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
V GNSLIDMY+K G++E A F+ M E+DV SW ++I GY G KA +L+ +M+
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
PN VT+ +L++ +G + ++ + I+ + +I +SG +
Sbjct: 412 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 471
Query: 512 KAMQIFR 518
+A + R
Sbjct: 472 EAYALIR 478
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 185/430 (43%), Gaps = 73/430 (16%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
+V +L L K L+ C + LIH +I +G CS++++ + ++ +Y K G+
Sbjct: 3 VVSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGD 62
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+ A+KLF + +RD V+W A+I+ F + G A F M E V+ T+ ++ S
Sbjct: 63 VKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKS 122
Query: 297 YNQLG-------------RCDIAVDLM------------RKMESFGLT------PDVYTW 325
LG + + A +L+ KME L D+ +W
Sbjct: 123 CKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSW 182
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MI G+T + L + ML G +P+ T E+HG+ +K
Sbjct: 183 NAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK 242
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC-GKAYE 444
+ SL++ Y KCG L A ++ + +RD+ S +I G+ C A++
Sbjct: 243 LGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFD 302
Query: 445 LFMKM------------------------------------QDSDSPPNVVTWNALITGY 468
+F M + S +V N+LI Y
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMY 362
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+SG + A+ F+ ++ +++V SW SLIAG+ + G +KA+ ++ RM+ +I PN
Sbjct: 363 AKSGEIEDAVLAFEEMK-----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPN 417
Query: 529 SVTVLSILPA 538
VT LS+L A
Sbjct: 418 DVTFLSLLSA 427
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 205/489 (41%), Gaps = 67/489 (13%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A +++ G DA+ + + + K TY ++L+SC D C++ G ++H +
Sbjct: 83 AMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE-K 141
Query: 116 GNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
GN N V + L+S+Y++CG + EAR FD M+ER+L +W+AMI + + L
Sbjct: 142 GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSL 201
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F M+ G PD F +L+A LE +H +AI+ G S + S++ Y K
Sbjct: 202 FQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVK 261
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG-----------DIEQARKYFD------ 276
CG + A KL + +RD ++ A+ITGF Q D+ + + D
Sbjct: 262 CGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSS 321
Query: 277 --------------------AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
A++ + + N LI Y + G + AV +M+
Sbjct: 322 MLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE- 380
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
DV +W+S+I+G+ + G A+DL +M ++PN +T
Sbjct: 381 ---KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 377 XEI-------HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ---RIFDMMYERDVYSW 426
+I HGI + + + +IDM ++ G LE A R + + +W
Sbjct: 438 WKIYDTMINKHGIEAREEHL------SCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTW 491
Query: 427 NTIIGGYCHAG---FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
+ G A + M+ P V + L + Y +GA D AL+ K
Sbjct: 492 GAFLDACRRHGNVQLSKVAATQLLSME----PRKPVNYINLASVYAANGAWDNALNTRKL 547
Query: 484 IEKDGKIKR 492
+++ G +
Sbjct: 548 MKESGSCNK 556
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 153/298 (51%), Gaps = 8/298 (2%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---R 111
+A ++ +N + ++ + +G K T+ +LL++ I C+E+ ELH +
Sbjct: 183 NAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK 242
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS-WEEV 170
+G G + + + LV+ Y KCG L+ A K+ + ++R+L + +A+I S++ + +
Sbjct: 243 LGF-GRSSALIRS-LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMA 229
D+F DM+R DE ++ +L+ C + GR IH A++ + + NS++
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 230 VYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
+YAK GE+ A F+ M E+D +W ++I G+ ++G+ E+A ++ M+ E ++P VT
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 420
Query: 290 WNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+ L+++ + G+ ++ + M G+ S +I + G A L+R
Sbjct: 421 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 159/399 (39%), Gaps = 95/399 (23%)
Query: 256 NAIITGFCQN--------------GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
N+I GFC N GD++ ARK FD + +
Sbjct: 37 NSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR-------------------- 76
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
DV +W++MIS F++ G AL L ++M V+ N T
Sbjct: 77 -------------------DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYG 117
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER 421
+IHG K + +++ ++L+ +Y++CG +E A+ FD M ER
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL----------------- 464
D+ SWN +I GY ++ LF M P+ T+ +L
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELH 237
Query: 465 ------------------ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
+ Y++ G+ A L +G KR++ S +LI GF Q
Sbjct: 238 GLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL-----HEGTKKRDLLSCTALITGFSQ 292
Query: 507 SGQ-KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS-EI 564
A IF+ M + + V V S+L + + ++IH AL+ + + ++
Sbjct: 293 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 352
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ N LID YAKSG + + F+ + KD+ SW +++
Sbjct: 353 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 30/255 (11%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IHG + ++ + LID+Y K GD++ A+++FD + +RDV SW +I + G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK------------ 486
A LF +M D N T+ +++ G + + + +EK
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 487 ------------------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
D +R++ SWN++I G+ + D + +F+ M P+
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
T S+L A + + V E+H A++ ++ L+++Y K G+L + ++ +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 589 GLPLKDIISWNIMLS 603
G +D++S +++
Sbjct: 274 GTKKRDLLSCTALIT 288
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 206/487 (42%), Gaps = 92/487 (18%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
T ++ +K G ++ AR+VFD M E + W+ M+ + SR +E + LF +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
PD++ IL C G+++ GR I S+ IR G C+S+ VNNS++ +Y KC + A K+
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 244 FKSM--DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
F+ M D R+ VTW +++ + E A F M + WNI+I+ + G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVA----FAWNIMISGHAHCG 183
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK------GRTYHALDLLRKMLLSGVEP 355
+ + + L ++M PD YT+SS+++ + GR HA+ +L+ S VE
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV-MLKNGWSSAVEA 242
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
NS++ Y+K G + A R
Sbjct: 243 K---------------------------------------NSVLSFYTKLGSRDDAMREL 263
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+ + SWN+II G KA E+F + N+VTW +ITGY ++G +
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE----KNIVTWTTMITGYGRNGDGE 319
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
QAL F + K G + + ++
Sbjct: 320 QALRFFVEMMKSG------------------------------------VDSDHFAYGAV 343
Query: 536 LPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
L A + L K IH C + V N L++ YAK G++ + R F + KD+
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 596 ISWNIML 602
+SWN ML
Sbjct: 404 VSWNTML 410
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 205/489 (41%), Gaps = 78/489 (15%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPF 121
G +A+A+ L +K ++ +L +C ++ GR++ + R G ++
Sbjct: 49 GLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLP-- 106
Query: 122 VETKLVSMYSKCGHLSEARKVFD---------------------------------EMRE 148
V L+ MY KC A KVF EM +
Sbjct: 107 VNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK 166
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC-GKCGDLETGRL 207
R F W+ MI + E + LF +M+ F PD + ++ AC ++ GR+
Sbjct: 167 RVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRM 226
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
+H+V +++G S++ NS+++ Y K G A + +S++ V+WN+II + G+
Sbjct: 227 VHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGE 286
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
E+A + F E+ + VTW +I Y + G + A+ +M G+ D + + +
Sbjct: 287 TEKALEVFHLAPEKNI----VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGA 342
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
++ + H KM IHG +
Sbjct: 343 VLHACSGLALLGHG-----KM------------------------------IHGCLIHCG 367
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
GN+L+++Y+KCGD++ A R F + +D+ SWNT++ + G +A +L+
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
M S P+ VT+ L+T SG ++ +F+ + KD +I V +I F +
Sbjct: 428 NMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 508 GQKDKAMQI 516
G +A +
Sbjct: 488 GHLAEAKDL 496
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 144/319 (45%), Gaps = 28/319 (8%)
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
IAS + GR A + M D W++M++ +++ G A+ L ++ S
Sbjct: 11 IASLAKSGRIASARQVFDGMPEL----DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+P+ + +I + ++ + NSLIDMY KC D +A +
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 414 IF-DMMYE-RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV-TWNALITGYMQ 470
+F DM + R+ +W +++ Y +A A ++F++M P V WN +I+G+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM-----PKRVAFAWNIMISGHAH 181
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
G + L LFK + + + K + +++SL + + D + ++ RM + N
Sbjct: 182 CGKLESCLSLFKEM-LESEFKPDCYTFSSL----MNACSADSSNVVYGRMVHAVMLKNGW 236
Query: 531 TVL-----SILPAFANLVA-GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
+ S+L + L + ++E+ +++++S ++I ID+ K G +
Sbjct: 237 SSAVEAKNSVLSFYTKLGSRDDAMRELESI----EVLTQVSWNSI-IDACMKIGETEKAL 291
Query: 585 RIFDGLPLKDIISWNIMLS 603
+F P K+I++W M++
Sbjct: 292 EVFHLAPEKNIVTWTTMIT 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 16/269 (5%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNP 120
NG A+ + + G Y +L +C + G+ +H G G
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA-- 372
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V LV++Y+KCG + EA + F ++ ++L +W+ M+ A ++ + L+ +M+
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGF 239
G PD +L C G +E G +I ++ + + + ++ ++ + G +
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 240 AKKLFKS-----MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
AK L + D ++ +W ++ + E R+ ++ EP +L+
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKI--AEPSEEMSFVLL 550
Query: 295 AS-YNQLGRCDIAVDLMRKMESFGL--TP 320
++ Y GR D+ R+M G+ TP
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTP 579
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 217/477 (45%), Gaps = 64/477 (13%)
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
+S Y + G +EA +VF M + +++ MI R +E LF +M P+
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PER 124
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
L+ N ++ Y + +G A++LF+
Sbjct: 125 DLVSW---------------------------------NVMIKGYVRNRNLGKARELFEI 151
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
M ERD +WN +++G+ QNG ++ AR FD M E+ V+WN L+++Y Q + + A
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND----VSWNALLSAYVQNSKMEEA 207
Query: 307 VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXX 366
L + E++ L +W+ ++ GF +K + A M + V + +
Sbjct: 208 CMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 367 XXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSW 426
E S V DV T +++ Y + +E A+ +FD M ER+ SW
Sbjct: 264 GKIDEARQLFDE--------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
N ++ GY A ELF D NV TWN +ITGY Q G +A +LF ++ K
Sbjct: 316 NAMLAGYVQGERMEMAKELF----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 487 DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
R+ SW ++IAG+ QSG +A+++F +M+ N + S L A++VA +
Sbjct: 372 -----RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K++H ++ + V N L+ Y K G++ + +F + KDI+SWN M++
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 196/440 (44%), Gaps = 42/440 (9%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
++S Y++ G + +AR VFD M E+N +W+A++ A + EE LF +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
LL ++ K +E + S+ +R + N+I+ YA+ G++ A++LF
Sbjct: 223 NCLLGGFVK---KKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG----------------------- 282
+D TW A+++G+ QN +E+AR+ FD M E
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 283 --VEP--GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
V P + TWN +I Y Q G+ A +L KM D +W++MI+G++Q G +
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHS 390
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
+ AL L +M G N + ++HG VK GN+L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 399 IDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNV 458
+ MY KCG +E A +F M +D+ SWNT+I GY GF A F M+ P+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
T A+++ +G D+ F + +D + N + ++ ++G + A + +
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 519 RMQFFQIAPNSVTVLSILPA 538
M F P++ ++L A
Sbjct: 571 NMPF---EPDAAIWGTLLGA 587
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 206/450 (45%), Gaps = 68/450 (15%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
++S Y + G ARK+FDEM ER+L +W+ MI R ++ + +LF M D
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----D 156
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
+L + G ++ R + S N++++ Y + +M A LFK
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW----NALLSAYVQNSKMEEACMLFK 212
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
S + V+WN ++ GF + I +AR++FD+M V V+WN +I Y Q G+ D
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDE 268
Query: 306 AVDLMRKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXX 363
A L F +P DV+TW++M+SG+ Q A +L KM E N ++
Sbjct: 269 ARQL------FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAM 318
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
E+ + +V T N++I Y++CG + A+ +FD M +RD
Sbjct: 319 LAGYVQGERMEMAKELFDV----MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW---------------------- 461
SW +I GY +G +A LF++M+ N ++
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 462 -------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
NAL+ Y + G+ ++A DLFK E GK ++ SWN++IAG+ + G
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMAGK---DIVSWNTMIAGYSRHG 489
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+ A++ F M+ + P+ T++++L A
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSA 519
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 147/294 (50%), Gaps = 8/294 (2%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ N + +A + D + E+ +++ +L + + +E+ +EL ++
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKEL---FDVM 338
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
N +++ Y++CG +SEA+ +FD+M +R+ +W+AMI S+ E + LF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M R G + L C LE G+ +H ++ G + V N+++ +Y KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ A LFK M +D V+WN +I G+ ++G E A ++F++M+ EG++P T +++
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 296 SYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+ + G D M + +G+ P+ ++ M+ + G A +L++ M
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 141/349 (40%), Gaps = 80/349 (22%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F T +VS Y + + EAR++FD+M ERN +W+AM+ + + E +LF
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD----- 336
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
++P C ++ N+++ YA+CG++ A
Sbjct: 337 -------VMP---------------------------CRNVSTWNTMITGYAQCGKISEA 362
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE------------------- 281
K LF M +RD V+W A+I G+ Q+G +A + F M+ E
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 282 ----------------GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G E G N L+ Y + G + A DL ++M D+ +W
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG----KDIVSW 478
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGV 384
++MI+G+++ G AL M G++P+ T+ + + +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF-DMMYERDVYSWNTIIGG 432
++ + ++D+ + G LE A + +M +E D W T++G
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 19/214 (8%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
D+ N I Y + G A R+F M S+N +I GY G A +LF +M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
+ D +V+WN +I GY+++ +A +LF+ + +R+V SWN++++G+ Q+G
Sbjct: 123 ERD----LVSWNVMIKGYVRNRNLGKARELFEIMP-----ERDVCSWNTMLSGYAQNGCV 173
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS-NI 569
D A +F RM N V+ ++L A+ V K++E C L ++ + VS N
Sbjct: 174 DDARSVFDRMP----EKNDVSWNALLSAY---VQNSKMEE--ACMLFKSRENWALVSWNC 224
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L+ + K ++ +R+ FD + ++D++SWN +++
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 224/472 (47%), Gaps = 27/472 (5%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
L NG + A + D++ + +++ +++ I+ D +E + L G + N
Sbjct: 179 LIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLL---FGDMSEKNV 231
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
T +V Y + G + EA ++F EM ERN+ +W+AMI + + + E + LF +M +
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Query: 181 --GFLPDEFLLPKILQACGKCGDLETGRL---IHSVAIRHG---MCSSIRVNNSIMAVYA 232
P+ L + ACG G +E RL +H+ I +G + R+ S++ +YA
Sbjct: 292 VDAVSPNGETLISLAYACGGLG-VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYA 350
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
G + A+ L + D + N II + +NGD+E+A F+ ++ + V+W
Sbjct: 351 SSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDK---VSWTS 405
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
+I Y + G A L +K+ D TW+ MISG Q A LL M+ G
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV--DDVLTGNSLIDMYSKCGDLEA 410
++P + T IH + K + D++ NSL+ MY+KCG +E
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
A IF M ++D SWN++I G H G KA LF +M DS PN VT+ +++
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
SG + L+LFK +++ I+ + + S+I ++G+ +A + + F
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPF 633
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 243/513 (47%), Gaps = 47/513 (9%)
Query: 105 GRELHARIGLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
R L +I G++N V T L+S Y+K G+L EAR +F+ M ERN+ T +AM+ +
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+ E LF +M ++ ++ + C D GR +V + M V
Sbjct: 121 CRRMNEAWTLFREMPKN-------VVSWTVMLTALCDD---GRSEDAVELFDEMPERNVV 170
Query: 224 N-NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
+ N+++ + G+M AK++F +M RD V+WNA+I G+ +N +E+A+ F M E+
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN 230
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
V VTW ++ Y + G A L +M ++ +W++MISGF AL
Sbjct: 231 V----VTWTSMVYGYCRYGDVREAYRLFCEMPE----RNIVSWTAMISGFAWNELYREAL 282
Query: 343 DLLRKML--LSGVEPNSITVXXXXXX--XXXXXXXXXXXEIHG--IGVKMSLVD-DVLTG 395
L +M + V PN T+ ++H I VD D
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLA 342
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
SL+ MY+ G + +AQ + + + D+ S N II Y G +A LF +++ S
Sbjct: 343 KSLVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERAETLFERVK---SL 397
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRI-EKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
+ V+W ++I GY+++G +A LF+++ +KDG +W +I+G +Q+ +A
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG------VTWTVMISGLVQNELFAEAA 451
Query: 515 QIFRRMQFFQIAPNSVT---VLSILPAFANLVAGKKVKEIHCCALRRNLV--SEISVSNI 569
+ M + P + T +LS A +NL G K IHC + ++ + N
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG---KHIHCVIAKTTACYDPDLILQNS 508
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
L+ YAK G + + IF + KD +SWN M+
Sbjct: 509 LVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/607 (21%), Positives = 254/607 (41%), Gaps = 104/607 (17%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV 122
S G L A +LD + ++GS R + + +LL ++ R L ++ N
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFE---VMPERNIVT 110
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+++ Y KC ++EA +F EM +N+ +W+ M+ A + E+ V+LF +M
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV 169
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
+ L+ +++ GD+E + + + S N+++ Y + M AK
Sbjct: 170 VSWNTLVTGLIRN----GDMEKAKQVFDAMPSRDVVSW----NAMIKGYIENDGMEEAKL 221
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA--SYNQL 300
LF M E++ VTW +++ G+C+ GD+ +A + F M E + V+W +I+ ++N+L
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNEL 277
Query: 301 GRCDIAVDLMRKMESFGLTPD-------VYTWSSMISGFTQKGRTYH------------- 340
R + + L K + ++P+ Y + F + G H
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 341 ----ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG-------IGVKMSLV 389
A L+ SG+ ++ ++ +G + ++ +
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL 397
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF----------- 438
D ++ S+ID Y + GD+ A +F ++++D +W +I G
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 439 --CG-----KAYELFMKMQDSDS-------------------PPNVVTWNALITGYMQSG 472
CG Y + + + S P+++ N+L++ Y + G
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
A + A ++F ++ ++++ SWNS+I G G DKA+ +F+ M PNSVT
Sbjct: 518 AIEDAYEIFAKM-----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 533 LSILPAFAN-------LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRR 585
L +L A ++ L K +KE + +++ + IS +ID ++G L +
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETY--SIQPGIDHYIS----MIDLLGRAGKLKEAEE 626
Query: 586 IFDGLPL 592
LP
Sbjct: 627 FISALPF 633
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 180/409 (44%), Gaps = 98/409 (23%)
Query: 235 GEMGFAKKLFKSMDERDSVT----WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G + A+ L + +R S+ W ++++ + + G +++AR F+ M E + VT
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI----VTC 111
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N ++ Y + R + A L R+M +V +W+ M++ GR+ A++L +M
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEM-- 164
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
P +V++ N+L+ + GD+E
Sbjct: 165 ----PER---------------------------------NVVSWNTLVTGLIRNGDMEK 187
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
A+++FD M RDV SWN +I GY +A LF M S NVVTW +++ GY +
Sbjct: 188 AKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCR 243
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ--FFQIAPN 528
G +A LF + +RN+ SW ++I+GF + +A+ +F M+ ++PN
Sbjct: 244 YGDVREAYRLFCEMP-----ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPN 298
Query: 529 SVTVLSILPAFANL-VAGKKVKEI--------------HCCALRRNLVS----------- 562
T++S+ A L V +++ E H L ++LV
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 563 --------EISVSNILIDSYAKSGNLMYSRRIFDGL-PLKDIISWNIML 602
++ NI+I+ Y K+G+L + +F+ + L D +SW M+
Sbjct: 359 QSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 204/462 (44%), Gaps = 90/462 (19%)
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
Y R GF +E L IL+ + G + L+ + R G + + S+++ YAK
Sbjct: 35 YGSYRRGFSNEEAL---ILRRLSEGGLVHARHLLDKIPQR-GSINRVVYWTSLLSKYAKT 90
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
G + A+ LF+ M ER+ VT NA++TG+ + + +A F M + +V+W +++
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKN-----VVSWTVML 145
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+ GR + AV+L +M +V +W+++++G + G A + M
Sbjct: 146 TALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDAM------ 195
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ DV++ N++I Y + +E A+ +
Sbjct: 196 PSR---------------------------------DVVSWNAMIKGYIENDGMEEAKLL 222
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
F M E++V +W +++ GYC G +AY LF +M + N+V+W A+I+G+ +
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELY 278
Query: 475 DQALDLFKRIEK-------DGKIKRNVA-SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
+AL LF ++K +G+ ++A + L F + G++ A I +
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHD 338
Query: 527 PNSVTVLSILPAFANLVAGKKVK-----EIHCCAL--------------------RRNLV 561
L + A + L+A + ++ C + ++L
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 562 SEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++S ++ +ID Y ++G++ + +F L KD ++W +M+S
Sbjct: 399 DKVSWTS-MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 194/419 (46%), Gaps = 37/419 (8%)
Query: 104 VGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS 162
+G +LH G + + V L+SMY+K RKVFDEM R+ ++ ++I +C
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDL-ETGRLIHS-VAIRHGMCSS 220
++ E + L +M +GF+P L+ +L C + G + R+ H+ V + M S
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
+ ++ +++ +Y K + A +F M+ ++ V+W A+I+G N + E F AMQ
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 281 EGVEPGLVTWNILIASYNQLG---------------------------------RCDIAV 307
E + P VT ++ + +L RC V
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG-NV 303
Query: 308 DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXX 367
L R + DV WSSMISG+ + G ++LL +M G+E NS+T+
Sbjct: 304 SLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSAC 363
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
+H +K + +L GN+LIDMY+KCG L AA+ +F + E+D+ SW+
Sbjct: 364 TNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWS 423
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
++I Y G +A E+F M + + + A+++ +G ++A +F + K
Sbjct: 424 SMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK 482
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 41/340 (12%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDR-DCIEVGRELHARIGLVG 116
+N C +G L +A+ ++ + G + +LL C +V R HA + +
Sbjct: 120 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 117 NVNPFV--ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ V T LV MY K + A VFD+M +N +W+AMI C +++E VDLF
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLF 239
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETG----RLIHSVAIRHGMCSSIRVNNSIMAV 230
M R P+ L +L A C +L G + IH + RHG + R+ + M +
Sbjct: 240 RAMQRENLRPNRVTLLSVLPA---CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM 296
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
Y +CG + ++ LF++ RD V W+++I+G+ + GD + + M++EG+E VT
Sbjct: 297 YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL 356
Query: 291 NILIAS-------------YNQLGRC---------DIAVDLMRKMESFGLTPDVY----- 323
++++ ++Q+ +C + +D+ K S +V+
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Query: 324 ----TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+WSSMI+ + G AL++ + M+ G E + +
Sbjct: 417 KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMA 456
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 153/360 (42%), Gaps = 47/360 (13%)
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G + V N LI+ Y + R AV RK+ L D ++ S+I+ Q G Y A
Sbjct: 77 GADCDTVVSNSLISMYAKFSR-KYAV---RKVFDEMLHRDTVSYCSIINSCCQDGLLYEA 132
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI-HG-IGVKMSLVDDVLTGNSLI 399
+ L+++M G P S V + H + V + + VL +L+
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
DMY K D AA +FD M ++ SW +I G +LF MQ + PN V
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRV 252
Query: 460 TW------------------------------------NALITGYMQSGAEDQALDLFKR 483
T A +T Y + G + LF+
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE- 311
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
K+ R+V W+S+I+G+ ++G + M + +M+ I NSVT+L+I+ A N
Sbjct: 312 ---TSKV-RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+H L+ +S I + N LID YAK G+L +R +F L KD++SW+ M++
Sbjct: 368 LLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 180/448 (40%), Gaps = 84/448 (18%)
Query: 170 VVDLFYD-------MVRHGFLPDEF--LLPKILQACG-KCGDLETGRLIHSVAIRHGMCS 219
V D FYD + H + F +LP +++AC + G +H + ++ G
Sbjct: 21 VSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADC 80
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
V+NS++++YAK +K+F M RD+V++ +II CQ+G + +A K M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 280 EEGVEP------GLVTWNILIASYNQLGRCDIAVDLM--RKMESFGLTP---DVY----- 323
G P L+ + S +++ R A+ L+ R ES L+ D+Y
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 324 -----------------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX-X 365
+W++MISG +DL R M + PN +T+
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
EIHG + D + + MY +CG++ ++ +F+ RDV
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------------------ 461
W+++I GY G C + L +M+ N VT
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 462 -----------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
NALI Y + G+ A ++F + ++++ SW+S+I + G
Sbjct: 381 KCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL-----TEKDLVSWSSMINAYGLHGHG 435
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+A++IF+ M + + L+IL A
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSA 463
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 139/277 (50%), Gaps = 8/277 (2%)
Query: 78 AEQGSKVRP--ITYMNLLQSCIDRDC-IEVGRELHA---RIGLVGNVNPFVETKLVSMYS 131
A Q +RP +T +++L +C++ + + +E+H R G + + + ++MY
Sbjct: 241 AMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGC--HADERLTAAFMTMYC 298
Query: 132 KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
+CG++S +R +F+ + R++ WS+MI + EV++L M + G + L
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
I+ AC L +HS ++ G S I + N+++ +YAKCG + A+++F + E+D
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
V+W+++I + +G +A + F M + G E + + ++++ N G + A +
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+ + + + ++ I+ + G+ A ++ M
Sbjct: 479 QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINM 515
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 195/402 (48%), Gaps = 12/402 (2%)
Query: 119 NPFVETKLVSMYS---KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
+ F +KLV+ + + +S A + + + N FT +++I A + + E + +F
Sbjct: 70 DTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
+M+ PD++ +L+AC E GR IH + I+ G+ + + V N+++ VY + G
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG 189
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
A+K+ M RD+V+WN++++ + + G +++AR FD M+E VE +WN +I+
Sbjct: 190 YFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMIS 245
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE- 354
Y G A ++ M DV +W++M++ + G L++ KML E
Sbjct: 246 GYAAAGLVKEAKEVFDSMP----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ T+ +H K + + +L+DMYSKCG ++ A +
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
F +RDV +WN+II G A E+F +M PN +T+ +++ G
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
DQA LF+ + +++ + + ++ + G+ ++A ++
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 146/286 (51%), Gaps = 10/286 (3%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
+P+ +T +S+I + AL + R+MLL V P+ + +
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IHG+ +K LV DV N+L+++Y + G E A+++ D M RD SWN+++ Y G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+A LF +M++ NV +WN +I+GY +G +A ++F D R+V SWN
Sbjct: 222 VDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVF-----DSMPVRDVVSWN 272
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQI-APNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
+++ + G ++ +++F +M P+ T++S+L A A+L + + + +H +
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ E ++ L+D Y+K G + + +F +D+ +WN ++S
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 122/225 (54%), Gaps = 2/225 (0%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF-LP 184
++S Y+ G + EA++VFD M R++ +W+AM+ A + + EV+++F M+ P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
D F L +L AC G L G +H +HG+ + +++ +Y+KCG++ A ++F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD 304
++ +RD TWN+II+ +G + A + F M EG +P +T+ ++++ N +G D
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLD 422
Query: 305 IAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
A L M S + + P + + M+ + G+ A +L+ ++
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 22/292 (7%)
Query: 35 HANSNYVSMSIRSL-PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLL 93
A + SM +R + + + A + C N L +LD E K T +++L
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE---KPDGFTLVSVL 311
Query: 94 QSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF 152
+C + G +H I G + F+ T LV MYSKCG + +A +VF +R++
Sbjct: 312 SACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS 371
Query: 153 TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
TW+++I S ++ +++F +MV GF P+ +L AC G L+ R + +
Sbjct: 372 TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEM- 430
Query: 213 IRHGMCSSIRVNNSI------MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN- 265
M S RV +I + + + G++ A++L + ++ + G C+
Sbjct: 431 ----MSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 266 GDIEQARKYFDAMQEEGVE--PGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
G +EQA + + + E + G + L AS GR + +D R M +
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASD---GRWEKVIDGRRNMRA 535
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/590 (22%), Positives = 266/590 (45%), Gaps = 87/590 (14%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR 147
TY ++L +C + + G+ + AR+ G + FV T +V +Y+KCGH++EA +VF +
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
++ +W+ M+ ++ +++F +M G + + ++ ACG+ +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD--ERDSVTWNAIITGFCQN 265
+H+ + G V +++++Y+K G++ ++++F+ +D +R ++ N +IT F Q+
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQS 431
Query: 266 GDIEQARKYFDAMQEEG----------------------------VEPGLV----TWNIL 293
+A + F M +EG ++ GLV + L
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
Y++ G + + L + + D W+SMISGF + G A+ L +ML G
Sbjct: 492 FTLYSKCGSLEESYKLFQGIP----FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
P+ T+ EIHG ++ + + G++L++MYSKCG L+ A++
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM------QDSDSPPNVVTWNA---- 463
++D + E D S +++I GY G + LF M DS + +++ A
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 464 -------------------------LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
L+T Y + G+ D F +I ++ +W
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP-----DLIAWT 722
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE--IHCCAL 556
+LIA + Q G+ ++A+Q++ M+ P+ VT + +L A ++ G V+E H ++
Sbjct: 723 ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH---GGLVEESYFHLNSM 779
Query: 557 RRNLVSEISVSN--ILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
++ E + ++D+ +SG L + + + +K D + W +L+
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 239/547 (43%), Gaps = 72/547 (13%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
VE+ L+ ++SK +A KVF + N++ W+ +I R +++ V DLF++M
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGF 246
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
PD + +L AC L G+++ + I+ G + V +I+ +YAKCG M A
Sbjct: 247 QKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE---------------PG 286
++F + V+W +++G+ ++ D A + F M+ GVE P
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 287 LV-------TW-------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
+V W LI+ Y++ G D++ + ++ V +
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV---N 422
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
MI+ F+Q + A+ L +ML G+ + +V ++HG +K
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGK---QVHGYTLKS 479
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
LV D+ G+SL +YSKCG LE + ++F + +D W ++I G+ G+ +A LF
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 447 MKMQDSDSPPNVVTWNALIT---------------GYMQSGAEDQALDLFKRI----EKD 487
+M D + P+ T A++T GY D+ +DL + K
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 488 GKIK--RNV---------ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
G +K R V S +SLI+G+ Q G +FR M +S + SIL
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 537 PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDII 596
A A ++H + L +E SV + L+ Y+K G++ + F + D+I
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 597 SWNIMLS 603
+W +++
Sbjct: 720 AWTALIA 726
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 245/552 (44%), Gaps = 55/552 (9%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
SN S A+ I + G ++ T +++ +C + ++HA + G ++
Sbjct: 329 SNDAFS-ALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 122 VETKLVSMYSKCGHLSEARKVF---DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
V L+SMYSK G + + +VF D+++ +N+ + MI + S+ K + + LF M+
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
+ G DEF + +L C L G+ +H ++ G+ + V +S+ +Y+KCG +
Sbjct: 446 QEGLRTDEFSVCSLLSVL-DC--LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI---A 295
+ KLF+ + +D+ W ++I+GF + G + +A F M ++G P T ++ +
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Query: 296 SYNQLGR----------------CDIA---VDLMRKMESFGLTPDVY---------TWSS 327
S+ L R D+ V++ K S L VY + SS
Sbjct: 563 SHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSS 622
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+ISG++Q G L R M++SG +S + ++H K+
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
L + G+SL+ MYSK G ++ + F + D+ +W +I Y G +A +++
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
M++ P+ VT+ +++ G +++ + KD I+ + ++ +S
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA-------NLVAGKKVKEIHCCALRRNL 560
G+ +A M I P+++ ++L A VA KK E+ +
Sbjct: 803 GRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE----PSDA 855
Query: 561 VSEISVSNILID 572
+ IS+SNIL +
Sbjct: 856 GAYISLSNILAE 867
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 238/548 (43%), Gaps = 72/548 (13%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F+ L+S YS G +++A K+FD + + ++ + + MI + + +EE + F M
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL 144
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
GF +E ++ AC L+ I+ G V ++++ V++K A
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDA 204
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
K+F+ + WN II G +N + F M +P T++ ++A+ L
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 301 GR---------------------CDIAVDLMRK-------MESFGLTPD--VYTWSSMIS 330
+ C VDL K ME F P+ V +W+ M+S
Sbjct: 265 EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLS 324
Query: 331 GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD 390
G+T+ + AL++ ++M SGVE N+ TV ++H K
Sbjct: 325 GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 384
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIF---DMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
D +LI MYSK GD++ ++++F D + +++ N +I + + GKA LF
Sbjct: 385 DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFT 442
Query: 448 KMQD--------------------------------SDSPPNVVTWNALITGYMQSGAED 475
+M S ++ ++L T Y + G+ +
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
++ LF+ I K N A W S+I+GF + G +A+ +F M +P+ T+ ++
Sbjct: 503 ESYKLFQGI----PFKDN-ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 536 LPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
L ++ + + KEIH LR + + + + L++ Y+K G+L +R+++D LP D
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 596 ISWNIMLS 603
+S + ++S
Sbjct: 618 VSCSSLIS 625
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 41/248 (16%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
DV SL+ YS G + A ++FD + + DV S N +I GY ++ F KM
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 451 DSDSPPNVVTWNALITG----------------------YMQSGAEDQALDLFK---RIE 485
N +++ ++I+ + E +D+F R E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 486 KDGKIKR-----NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
K+ R NV WN++IAG L++ +F M P+S T S+L A A
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 541 NLVA---GKKVKE--IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
+L GK V+ I C A ++ V ++D YAK G++ + +F +P +
Sbjct: 263 SLEKLRFGKVVQARVIKCGA------EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 596 ISWNIMLS 603
+SW +MLS
Sbjct: 317 VSWTVMLS 324
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 232/505 (45%), Gaps = 38/505 (7%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
+P+ T+L Y+ L ARK+FD ER++F W+++I A ++ + V+ LF ++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R PD F + + + D + R IH +AI G+ ++I+ Y+K G +
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP----------GLV 288
A KLF S+ + D WN +I G+ G ++ F+ MQ G +P GL+
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 289 TWNILIASY----------------------NQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
++L+ ++ N RC S PD+ S
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACS 277
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
S+I+G+++ G AL L ++ +SG +P+ + V E+H +++
Sbjct: 278 SLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL 337
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
L D+ ++LIDMYSKCG L+ A +F + E+++ S+N++I G GF A+E F
Sbjct: 338 GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKF 397
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
++ + P+ +T++AL+ SG ++ ++F+R++ + I+ + ++
Sbjct: 398 TEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGM 457
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISV 566
+G+ ++A + +Q P +L L + + + E+ + +N SV
Sbjct: 458 AGKLEEAFEFVMSLQ----KPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV 513
Query: 567 SNILIDS-YAKSGNLMYSRRIFDGL 590
+++ + YA+ G R+ DG+
Sbjct: 514 YKVMLSNVYARYGRWDEVERLRDGI 538
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 149/291 (51%), Gaps = 9/291 (3%)
Query: 70 AVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKL 126
+ + + + +G + T + L ID + V +HA +I L + + +V L
Sbjct: 191 GINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL--DSHSYVGCAL 248
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
V+MYS+C ++ A VF+ + E +L S++I SR + +E + LF ++ G PD
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
L+ +L +C + D +G+ +HS IR G+ I+V ++++ +Y+KCG + A LF
Sbjct: 309 VLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
+ E++ V++N++I G +G A + F + E G+ P +T++ L+ + G +
Sbjct: 369 IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKG 428
Query: 307 VDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDL---LRKMLLSGV 353
++ +M+S FG+ P + M+ G+ A + L+K + SG+
Sbjct: 429 QEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 42/332 (12%)
Query: 308 DLMRKMESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
DL+ + F + P+ V+ W+S+I + + + L L ++L S P++ T
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
IHGI + L D + G++++ YSK G + A ++F + + D+
Sbjct: 115 GFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG------------------ 467
WN +I GY GF K LF MQ PN T AL +G
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 468 -----------------YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
Y + A +F I + ++ + +SLI G+ + G
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEP-----DLVACSSLITGYSRCGNH 289
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
+A+ +F ++ P+ V V +L + A L KE+H +R L +I V + L
Sbjct: 290 KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSAL 349
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
ID Y+K G L + +F G+P K+I+S+N ++
Sbjct: 350 IDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 30/256 (11%)
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
++H K L D L Y+ DL +A+++FD+ ER V+ WN+II Y A
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG-----------------AEDQALD- 479
LF ++ SD+ P+ T+ L G+ +S DQ
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 480 -LFKRIEKDGKIKR-----------NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
+ K K G I ++A WN +I G+ G DK + +F MQ P
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQP 205
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
N T++++ + +H L+ NL S V L++ Y++ + + +F
Sbjct: 206 NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVF 265
Query: 588 DGLPLKDIISWNIMLS 603
+ + D+++ + +++
Sbjct: 266 NSISEPDLVACSSLIT 281
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 243/534 (45%), Gaps = 81/534 (15%)
Query: 139 ARKVFDEMRERNLFT-WSAMIGACSREKSWEEVVDLFYDMVRHGFLP---DEFLLPKILQ 194
A K+FD +RN T + I R S + +F + ++ G+ DE L L+
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 195 ACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVT 254
AC GDL+ G IH + G S + V+N++M +Y K G A +F+++ + D V+
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 255 WNAIITGFCQNG-------DIEQARKYFDAMQ-------------------------EEG 282
WN I++GF N ++ A FDA + G
Sbjct: 145 WNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR-TYHA 341
+E LV N I Y++ G A + +M SF D+ +W+S++SG +Q+G + A
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEM-SF---KDMISWNSLLSGLSQEGTFGFEA 260
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
+ + R M+ GVE + ++ +IHG+ +K + GN L+
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 402 YSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
YSKCG LEA + +F M ER+V SW T+I + A +F+ M+ PN VT+
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 462 NALI---------------------TGYM-QSGAEDQALDLFKRIE--KDGKIK------ 491
LI TG++ + + + L+ + E +D K
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF 435
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP--AFANLVAGKKVK 549
R + SWN++I+GF Q+G +A+++F + PN T S+L AFA ++ K+ +
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 550 EIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
H L+ L S VS+ L+D YAK GN+ S ++F+ + K+ W ++S
Sbjct: 495 RCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 201/434 (46%), Gaps = 47/434 (10%)
Query: 86 PITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFD 144
TY L C+ + +G +L + + G + V ++MYS+ G AR+VFD
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 145 EMRERNLFTWSAMIGACSREKSWE-EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLE 203
EM +++ +W++++ S+E ++ E V +F DM+R G D ++ C DL+
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
R IH + I+ G S + V N +M+ Y+KCG + K +F M ER+ V+W +I+
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-- 351
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN---QL-------GRC---------- 303
+ + A F M+ +GV P VT+ LI + Q+ G C
Sbjct: 352 ---NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 304 --DIAVDLMRKMESFGLTP---------DVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
+ + L K E+ ++ +W++MISGF Q G ++ AL KM LS
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL----KMFLSA 464
Query: 353 VE---PNSITVXXXXXXXXXXX--XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
PN T H +K+ L + ++L+DMY+K G+
Sbjct: 465 AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
++ ++++F+ M +++ + W +II Y G LF KM + P++VT+ +++T
Sbjct: 525 IDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 468 YMQSGAEDQALDLF 481
+ G D+ ++F
Sbjct: 585 CNRKGMVDKGYEIF 598
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 200/490 (40%), Gaps = 91/490 (18%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V ++ MY K G A +F+ + + ++ +W+ ++ + ++ M G
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAG 169
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
+ D F L C G + S ++ G+ S + V NS + +Y++ G A+
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIE-QARKYFDAMQEEGVEPGLVTW---------- 290
++F M +D ++WN++++G Q G +A F M EGVE V++
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 291 -------------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
NIL++ Y++ G + + +M +V +W
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE----RNVVSW 345
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MIS A+ + M GV PN +T +IHG+ +K
Sbjct: 346 TTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
V + GNS I +Y+K LE A++ F+ + R++ SWN +I G+ GF +A ++
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 446 FMKMQDSDSPPNVVTW-------------------------------------NALITGY 468
F+ +++ PN T+ +AL+ Y
Sbjct: 461 FLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMY 519
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ G D++ +F + ++N W S+I+ + G + M +F +M +AP+
Sbjct: 520 AKRGNIDESEKVFNEMS-----QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPD 574
Query: 529 SVTVLSILPA 538
VT LS+L A
Sbjct: 575 LVTFLSVLTA 584
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 225/534 (42%), Gaps = 81/534 (15%)
Query: 55 DAQLNQLCSNGPLS-DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA--- 110
++ L+ L G +AV I + +G ++ +++ +++ +C +++ R++H
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 111 -----RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
+ VGN+ L+S YSKCG L + VF +M ERN+ +W+ MI +
Sbjct: 304 KRGYESLLEVGNI-------LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS----- 351
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGRLIHSVAIRHGMCSSIRVN 224
+ ++ V +F +M G P+E ++ A KC + ++ G IH + I+ G S V
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAV-KCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF-----DAMQ 279
NS + +YAK + AKK F+ + R+ ++WNA+I+GF QNG +A K F + M
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP 470
Query: 280 EE-------------------------------GVEPGLVTWNILIASYNQLGRCDIAVD 308
E G+ V + L+ Y + G D +
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ +M + + W+S+IS ++ G ++L KM+ V P+ +T
Sbjct: 531 VFNEMSQ----KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNS-LIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
EI + +++ ++ S ++DM + G L+ A+ + + S
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 646
Query: 428 TIIGGYC----HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
+ G C + K EL M+M+ S V +N Y + D+A ++ K
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNI----YAEKEEWDKAAEIRKA 702
Query: 484 IEKDGKIKRNVASW-------NSLIAGFLQSGQKD--KAMQIFRRMQFFQIAPN 528
+ K K SW SL SG K K+ +I+R ++ + N
Sbjct: 703 MRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMN 756
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 140/587 (23%), Positives = 267/587 (45%), Gaps = 58/587 (9%)
Query: 73 ILDSLAEQGSKVRPITYM---NLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKL 126
+ D L E+ ++ ++M ++L+S + R E R +H + GL+ ++ +KL
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLA--TSSKL 128
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
++ Y + G L + +FDE++E+++ W++MI A ++ + V LF +M+ G D
Sbjct: 129 LTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDS 188
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
L A ++H +AI G+ + N++M +YAK + A+ +F
Sbjct: 189 TTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTH 248
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
M+ RD V+WN I+T NG ++ +YF +M G E VT++ +I++ + + +
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 307 VDLMRKMESFGLTP---------------------------------DVYTWSSMISGFT 333
L + G +P DV + +++++GF
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 334 QKGRTYHALDLLRKML-LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
G A +L +M + ++P+ TV +HG V+M +
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 393 L-TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM-- 449
L NS+IDMY KCG A+ +F RD+ SWN++I + GF KA LF ++
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI------------KRNVASW 497
+ S S ++ T A++T S + + ++K G + R++ SW
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSW 548
Query: 498 NSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
NS+I+G SG ++++ F+ M + +I + +T+L + A NL + + H A+
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ + + N LI Y + ++ + ++F + ++ SWN ++S
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 232/537 (43%), Gaps = 63/537 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI---GL 114
+ + +NG ++ S+ G + +T+ ++ +C + + +G LH + G
Sbjct: 261 MTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGY 320
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ V ++SMYSKCG A VF+E+ R++ + +A++ + +EE +
Sbjct: 321 SPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGIL 380
Query: 175 YDMVR-HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMAVYA 232
M PD + I CG GR +H +R M S ++ V NS++ +Y
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
KCG A+ LFK+ RD V+WN++I+ F QNG +A+ F + E +
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 293 LIASYNQLGRCDIAVDLM-------------------RKMESFGLTPDVYTWSSMISGFT 333
L L CD + L+ ++E+ T D+ +W+S+ISG
Sbjct: 501 LAI----LTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCA 556
Query: 334 QKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
G +L + M G + + IT+ HG+ +K D
Sbjct: 557 SSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDT 616
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
N+LI MY +C D+E+A ++F ++ + ++ SWN +I + ++LF ++
Sbjct: 617 QLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK-- 674
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALD----LFKR---------------------IEKD 487
PN +T+ L++ Q G+ + L +R +E
Sbjct: 675 -LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG 733
Query: 488 GKIKRN-----VASWNSLIAGFLQSGQKDKAMQIFRRMQF-FQIAPNSVTVLSILPA 538
K+ RN +++WNS+I+ G +KAM++F+ + ++ PN + +S+L A
Sbjct: 734 MKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSA 790
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 239/568 (42%), Gaps = 99/568 (17%)
Query: 108 LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
L GLVG+ + + L+++Y+K +LS A VF M R++ +W+ ++ C
Sbjct: 213 LAIETGLVGDSS--LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHP 270
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC--SSIRVNN 225
+ + F M G D ++ AC +L G +H + I+ G + + V N
Sbjct: 271 RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGN 330
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE-EGVE 284
SI+++Y+KCG+ A+ +F+ + RD ++ NAI+ GF NG E+A + MQ + ++
Sbjct: 331 SIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQ 390
Query: 285 PGLVTWNILIA-----SYNQLGRCDIAVDLMRKMES---------------FGLTP---- 320
P + T + + S+++ GR + +M+S GLT
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 321 --------DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
D+ +W+SMIS F+Q G T+ A +L ++++
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-----------------SEYSCS 493
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA-QRIFDMMYERDVYSWNTIIG 431
+ I D ++ G S+ K GDL +A R+ M RD+ SWN++I
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVIS 553
Query: 432 GYCHAGFCGKAYELFMKM-QDSDSPPNVVTW----------------------------- 461
G +G ++ F M ++ +++T
Sbjct: 554 GCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRE 613
Query: 462 ------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
N LIT Y + + A+ +F I N+ SWN +I+ Q+ + Q
Sbjct: 614 LDTQLQNTLITMYGRCKDIESAVKVFGLISDP-----NLCSWNCVISALSQNKAGREVFQ 668
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYA 575
+FR ++ + PN +T + +L A L + + HC +RR + VS L+D Y+
Sbjct: 669 LFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 725
Query: 576 KSGNLMYSRRIFDGLPLKDIISWNIMLS 603
G L ++F + I +WN ++S
Sbjct: 726 SCGMLETGMKVFRNSGVNSISAWNSVIS 753
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 128/263 (48%), Gaps = 9/263 (3%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVN 119
S+G +++ +++ +G K+R IT + + + + + GR H I + ++
Sbjct: 557 SSGHHLESLRAFQAMSREG-KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD 615
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
++ L++MY +C + A KVF + + NL +W+ +I A S+ K+ EV LF ++
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL-- 673
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P+E +L A + G G H IR G ++ V+ +++ +Y+ CG +
Sbjct: 674 -KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLET 732
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-VEPGLVTWNILIASYN 298
K+F++ WN++I+ +G E+A + F + +EP ++ L+++ +
Sbjct: 733 GMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
Query: 299 QLGRCDIAVDLMRKMES-FGLTP 320
G D + ++ME FG+ P
Sbjct: 793 HSGFIDEGLSYYKQMEEKFGVKP 815
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 9/243 (3%)
Query: 83 KVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEA 139
K+ P IT++ LL + G + H + G NPFV LV MYS CG L
Sbjct: 674 KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG 733
Query: 140 RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGK 198
KVF ++ W+++I A E+ ++LF ++ + + P++ +L AC
Sbjct: 734 MKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSH 793
Query: 199 CGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE-RDSVTWN 256
G ++ G + + G+ I+ + + G++ A + + E + + W
Sbjct: 794 SGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWG 853
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA-SYNQLGRCDIAVDLMRKMES 315
A+++ +GD + ++ + + E +EP ++ I +A +Y LG + AV L + +E
Sbjct: 854 ALLSACNYHGDTKLGKEVAEVLFE--MEPDNASYYISLANTYVGLGGWEEAVRLRKMVED 911
Query: 316 FGL 318
L
Sbjct: 912 NAL 914
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 446 FMKMQDSDSPPNV-------------VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
FM ++++P +V T + L+T Y ++G + LF +++ +
Sbjct: 97 FMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE-----K 151
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIH 552
+V WNS+I Q+G+ A+ +F M +S T+L A ++L +K +H
Sbjct: 152 DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLH 211
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQ 604
C A+ LV + S+ N L++ YAK NL + +F + +DI+SWN ++++
Sbjct: 212 CLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 242/540 (44%), Gaps = 77/540 (14%)
Query: 92 LLQSCIDRDCIEVGRELHAR--IGLVGNVNPFVETKLVSMYSKCGH--LSEARKVFDEMR 147
LQ C+ +E +++HA+ + ++ P + + + + ++ +++
Sbjct: 9 FLQRCV---VLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFN 65
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
+ F+W ++ S+ + ++E VD++ DM G P + +L+ACGK ++ G+
Sbjct: 66 GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
IH+ A+++G+C + V ++ +Y++ G + AKK F + E+++V+WN+++ G+ ++G+
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-------------- 313
+++AR+ FD + E+ V+WN++I+SY + G A L M
Sbjct: 186 LDEARRVFDKIPEKDA----VSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 314 -----------ESFGLTP--DVYTWSSMISG----------------------------- 331
F P + +W +MISG
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 332 --FTQKGRTYHALDLLRKMLL--SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+TQ G+ AL L +ML S ++P+ IT+ + +
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
+ D L SLID+Y K GD A ++F + ++D S++ +I G G +A LF
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFT 421
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
M + PPNVVT+ L++ Y SG + F + KD ++ + + ++ ++
Sbjct: 422 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRA 480
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPA--FANLVAGKKVKEIHCCALRRNLVSEIS 565
G+ ++A ++ + M + PN+ ++L A N V ++ HC L + +S
Sbjct: 481 GRLEEAYELIKSM---PMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLS 537
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 136/341 (39%), Gaps = 63/341 (18%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
D ++W ++ +Q + +D+ M SG+ P+S V IH
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+K L V L+ +YS+ G +E A++ FD + E++ SWN+++ GY +G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK------------------ 482
+A +F K+ + D+ V+WN +I+ Y + G A LF
Sbjct: 188 EARRVFDKIPEKDA----VSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 483 --------RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ------------- 521
R D ++N SW ++I+G+ + G A ++FR M
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 522 -------------FFQ-------IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
F Q I P+ +T+ S++ A + L + +
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 562 SEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ +S LID Y K G+ + ++F L KD +S++ M+
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARI 112
DA + NG DA+ + + E+ S ++P IT +++ + G + + I
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 113 GLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G ++ + T L+ +Y K G ++A K+F + +++ ++SAMI C E
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEAN 417
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
LF M+ P+ +L A G ++ G + H + S ++ +
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDML 477
Query: 232 AKCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIE 269
+ G + A +L KSM + ++ W A++ + ++E
Sbjct: 478 GRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 516
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 487 DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
D ++N SWNSL+ G+L+SG+ D+A ++F ++ ++V+ I+ ++A K
Sbjct: 163 DDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYA-----K 213
Query: 547 KVKEIHCCALRRNLVSEISVS-NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K + C+L + + S NILI Y + +R FD +P K+ +SW M+S
Sbjct: 214 KGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMIS 271
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/570 (25%), Positives = 243/570 (42%), Gaps = 81/570 (14%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRP-----ITYMNLLQSCIDRDCIEVGRELHARI 112
L L S+G L DA L Q S + +LL +C+D G ++HA
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 113 GLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G + + KLV+ YS +EA+ + + + W+ +I + ++ + +EEV+
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
+ MV G PD F P +L+ACG+ D+ GR++H SS+ V N+++++Y
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 232 AKCGEMGFAKKLFKSMDERDSV-----------------------------------TWN 256
+ MG A++LF M ERD+V TWN
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWN 249
Query: 257 AIITGFCQNGD-------IEQARKYFDAMQEEGVEPGLVTW------------------- 290
I G Q G+ I + R + ++ + GL
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS 309
Query: 291 ---------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
N LI Y++ A+ + R+ E L TW+S+ISG+ Q ++ A
Sbjct: 310 SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC----TWNSIISGYAQLNKSEEA 365
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD-VLTGNSLID 400
LLR+ML++G +PNSIT+ E H ++ D + NSL+D
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
+Y+K G + AA+++ D+M +RD ++ ++I GY + G G A LF +M S P+ VT
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
A+++ S + LF +++ + I+ + ++ ++ + ++G KA I M
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+ T+L+ N GK E
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWAAE 575
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 198/474 (41%), Gaps = 79/474 (16%)
Query: 177 MVRHGFLPDEFLLPKIL--QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
+ HG L D F +L Q+ D ++HS A C +R + + V+A C
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSD---DLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
G E SV ++T + +A+ + + + P + WN+LI
Sbjct: 70 ISSGV---------EYHSVLVPKLVTFYSAFNLHNEAQSIIE--NSDILHP--LPWNVLI 116
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
ASY + + + ++M S G+ PD +T+ S++ + LD+ ++ G
Sbjct: 117 ASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE------TLDVAFGRVVHG-- 168
Query: 355 PNSITVXXXXXXXXXXXXXXXXXE-IHGIGVKMSLVD-----DVLTGNSLIDMYSKCGDL 408
SI V + +G+ L D D ++ N++I+ Y+ G
Sbjct: 169 --SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 409 EAAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW--- 461
A +FD M+ E V +WN I GG G A L +M++ + + V
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 462 --------------------------------NALITGYMQSGAEDQALDLFKRIEKDGK 489
N LIT Y + AL +F++ E++
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN-- 344
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
++ +WNS+I+G+ Q + ++A + R M PNS+T+ SILP A + + K
Sbjct: 345 ---SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 550 EIHCCALRRNLVSEIS-VSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
E HC LRR + + + N L+D YAKSG ++ ++++ D + +D +++ ++
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLI 455
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 206/437 (47%), Gaps = 40/437 (9%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
FV T V M+ KC + A KVF+ M ER+ TW+AM+ + ++ LF +M +
Sbjct: 88 FVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLN 147
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD + ++Q+ L+ +H+V IR G+ + V N+ ++ Y KCG++ A
Sbjct: 148 EITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207
Query: 241 KKLFKSMD--ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
K +F+++D +R V+WN++ + G+ A + M E +P L T+ L AS
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267
Query: 299 ----------------QLGR------CDIAVDLMRKME---SFGLTPDVYT------WSS 327
LG + + + K E S L D+ T W+
Sbjct: 268 NPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTV 327
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG----IG 383
MISG+ +KG AL L M+ SG +P+ +T+ I G
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
K D+V+ N+LIDMYSKCG + A+ IFD E+ V +W T+I GY G +A
Sbjct: 388 CKR---DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
+LF KM D D PN +T+ A++ SG+ ++ + F +++ I + ++ ++
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 504 FLQSGQKDKAMQIFRRM 520
+ G+ ++A+++ R M
Sbjct: 505 LGRKGKLEEALELIRNM 521
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 213/508 (41%), Gaps = 80/508 (15%)
Query: 169 EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
E + LF +M R GF P+ F P + +AC + D+ ++H+ I+ S + V + +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
++ KC + +A K+F+ M ERD+ TWNA+++GFCQ+G ++A F M+ + P V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 289 T-----------------------------------WNILIASYNQLGRCDIAVDLMRKM 313
T N I++Y + G D A + +
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
+ T V +W+SM ++ G + A L ML +P+ T
Sbjct: 215 DRGDRT--VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 272
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
IH + + D+ N+ I MYSK D +A+ +FD+M R SW +I GY
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVT------------------W-------------- 461
G +A LF M S P++VT W
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDN 392
Query: 462 ----NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
NALI Y + G+ +A D+F D ++ V +W ++IAG+ +G +A+++F
Sbjct: 393 VMICNALIDMYSKCGSIHEARDIF-----DNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE-IHCCALRRNLVSEISVSNILIDSYAK 576
+M PN +T L++L A A+ + +K E H N+ + + ++D +
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 577 SGNLMYSRRIFDGLPLK-DIISWNIMLS 603
G L + + + K D W +L+
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALLN 535
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 47/420 (11%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---R 111
+A L+ C +G A ++ + +T M L+QS +++ +HA R
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR--ERNLFTWSAMIGACSREKSWEE 169
+G+ +V V +S Y KCG L A+ VF+ + +R + +W++M A S +
Sbjct: 182 LGV--DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
L+ M+R F PD + +C L GRLIHS AI G I N+ ++
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 230 VYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
+Y+K + A+ LF M R V+W +I+G+ + GD+++A F AM + G +P LVT
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 290 WNILIASYNQLGR-----------------------CDIAVDLMRKMES-------FGLT 319
LI+ + G C+ +D+ K S F T
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 320 PD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
P+ V TW++MI+G+ G AL L KM+ +PN IT
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 378 EIHGIGVKMSLVDDVLTG----NSLIDMYSKCGDLEAA-QRIFDMMYERDVYSWNTIIGG 432
E I M V ++ G + ++D+ + G LE A + I +M + D W ++
Sbjct: 480 EYFHI---MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ R++ V W+ I + +L L R+M G EPN+ T
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
+H +K DV G + +DM+ KC ++ A ++F+ M ERD +WN
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT---------------------------- 460
++ G+C +G KA+ LF +M+ ++ P+ VT
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 461 -------WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
N I+ Y + G D A +F+ I++ R V SWNS+ + G+ A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG---DRTVVSWNSMFKAYSVFGEAFDA 240
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
++ M + P+ T +++ + N + + IH A+ +I N I
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 574 YAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
Y+KS + +R +FD + + +SW +M+S
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 241/565 (42%), Gaps = 85/565 (15%)
Query: 51 PKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITY--MNLLQSCIDRDCIEVGREL 108
P+ + S+G L +A L Q + Y +LL +C+ + G++L
Sbjct: 46 PQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 109 HARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
HA G + + KLV+ YS L EA+ + + + W+ +IG+ R K +
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH-SVAIRHGMCSSIRVNNS 226
+E V ++ M+ G DEF P +++AC D GR++H S+ + C+ + V N+
Sbjct: 166 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNA 224
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSV--------------------------------- 253
++++Y + G++ A++LF M ERD+V
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 254 --TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT---------------W------ 290
TWN I G + G+ A M+ V G V W
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 291 ----------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
N LI Y++ A + +++E+ L+ TW+S+ISGF
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAY 400
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG-IGVKMSLVDDVL 393
R+ LL++MLLSG PN IT+ E H I + S D ++
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
NSL+DMY+K G++ AA+R+FD M +RD ++ ++I GY G A F M S
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
P+ VT A+++ S + LF ++E I+ + ++ ++ + ++G DKA
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPA 538
IF + + P+S ++L A
Sbjct: 581 RDIFHTIPY---EPSSAMCATLLKA 602
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 176/402 (43%), Gaps = 67/402 (16%)
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
E DSV ++T + +++A+ + E + P + WN+LI SY + R +V
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITE--NSEILHP--LPWNVLIGSYIRNKRFQESVS 170
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ ++M S G+ D +T+ S+I LD ++ G SI V
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAA------LLDFAYGRVVHG----SIEVSSHRCNLY 220
Query: 369 XXXXXXXXXEIHG-IGVKMSLVD-----DVLTGNSLIDMYSKCGDLEAAQRIFDMMY--- 419
+ G + V L D D ++ N++I+ Y+ L A ++ D MY
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 420 -ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD---------------SPPNVVTW-- 461
E + +WNTI GG AG A + M++ + S + W
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 462 --------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
N+LIT Y + A +F+++E + ++++WNS+I
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN-----SLSTWNSII 395
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
+GF + + ++ + + M PN +T+ SILP FA + + KE HC LRR
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 562 SE-ISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ + + N L+D YAKSG ++ ++R+FD + +D +++ ++
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
LD + I ++ +I + WN LI ++++ + +++ +++RM I + T S++
Sbjct: 134 LDEAQTITENSEILHPLP-WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A A L+ + +H + + V N LI Y + G + +RR+FD + +D +S
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 598 WNIMLS 603
WN +++
Sbjct: 253 WNAIIN 258
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 241/565 (42%), Gaps = 85/565 (15%)
Query: 51 PKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITY--MNLLQSCIDRDCIEVGREL 108
P+ + S+G L +A L Q + Y +LL +C+ + G++L
Sbjct: 46 PQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 109 HARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
HA G + + KLV+ YS L EA+ + + + W+ +IG+ R K +
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH-SVAIRHGMCSSIRVNNS 226
+E V ++ M+ G DEF P +++AC D GR++H S+ + C+ + V N+
Sbjct: 166 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNA 224
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSV--------------------------------- 253
++++Y + G++ A++LF M ERD+V
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 254 --TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT---------------W------ 290
TWN I G + G+ A M+ V G V W
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 291 ----------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
N LI Y++ A + +++E+ L+ TW+S+ISGF
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAY 400
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG-IGVKMSLVDDVL 393
R+ LL++MLLSG PN IT+ E H I + S D ++
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
NSL+DMY+K G++ AA+R+FD M +RD ++ ++I GY G A F M S
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
P+ VT A+++ S + LF ++E I+ + ++ ++ + ++G DKA
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPA 538
IF + + P+S ++L A
Sbjct: 581 RDIFHTIPY---EPSSAMCATLLKA 602
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 176/402 (43%), Gaps = 67/402 (16%)
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
E DSV ++T + +++A+ + E + P + WN+LI SY + R +V
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITE--NSEILHP--LPWNVLIGSYIRNKRFQESVS 170
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ ++M S G+ D +T+ S+I LD ++ G SI V
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAA------LLDFAYGRVVHG----SIEVSSHRCNLY 220
Query: 369 XXXXXXXXXEIHG-IGVKMSLVD-----DVLTGNSLIDMYSKCGDLEAAQRIFDMMY--- 419
+ G + V L D D ++ N++I+ Y+ L A ++ D MY
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 420 -ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD---------------SPPNVVTW-- 461
E + +WNTI GG AG A + M++ + S + W
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 462 --------------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
N+LIT Y + A +F+++E + ++++WNS+I
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN-----SLSTWNSII 395
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
+GF + + ++ + + M PN +T+ SILP FA + + KE HC LRR
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 562 SE-ISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ + + N L+D YAKSG ++ ++R+FD + +D +++ ++
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
LD + I ++ +I + WN LI ++++ + +++ +++RM I + T S++
Sbjct: 134 LDEAQTITENSEILHPLP-WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A A L+ + +H + + V N LI Y + G + +RR+FD + +D +S
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 598 WNIMLS 603
WN +++
Sbjct: 253 WNAIIN 258
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 210/457 (45%), Gaps = 78/457 (17%)
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P++F P +L++C K GD+ GR++H+ ++ G + +++++Y K ++ A K+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 244 FKSMDERDSVTWNAIITGFCQNG--------------------------------DIEQA 271
M ER + NA ++G +NG DIE
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ + G E + L++ Y++ G +A + K+ V T+++ ISG
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPH----KSVVTYNAFISG 204
Query: 332 FTQKG---RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
+ G +L+RK S EPN +T ++HG+ +K
Sbjct: 205 LMENGVMNLVPSVFNLMRK--FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+ + G +LIDMYSKC W + AY +F +
Sbjct: 263 QFETMVGTALIDMYSKC------------------RCWKS-------------AYIVFTE 291
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
++D+ N+++WN++I+G M +G + A++LF++++ +G +K + A+WNSLI+GF Q G
Sbjct: 292 LKDTR---NLISWNSVISGMMINGQHETAVELFEKLDSEG-LKPDSATWNSLISGFSQLG 347
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSN 568
+ +A + F RM + P+ + S+L A +++ K KEIH ++ +I V
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 569 ILIDSYAKSGNLMYSRRIFDGL--PLKDIISWNIMLS 603
LID Y K G ++RRIFD KD + WN+M+S
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 216/473 (45%), Gaps = 45/473 (9%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
++A ++ L NG DA + GS + +T ++L C D IE G +LH
Sbjct: 100 VNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGGMQLHCLAM 156
Query: 114 LVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
G + +V T LVSMYS+CG A ++F+++ +++ T++A I E +V
Sbjct: 157 KSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL-MENGVMNLVP 215
Query: 173 LFYDMVRH--GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
++++R P++ + AC +L+ GR +H + ++ V +++ +
Sbjct: 216 SVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDM 275
Query: 231 YAKCGEMGFAKKLFKSM-DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
Y+KC A +F + D R+ ++WN++I+G N
Sbjct: 276 YSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN------------------------ 311
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
G+ + AV+L K++S GL PD TW+S+ISGF+Q G+ A +ML
Sbjct: 312 -----------GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
+ P+ + EIHG +K + D+ SLIDMY KCG
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 410 AAQRIFDMM--YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
A+RIFD +D WN +I GY G C A E+F +++ P++ T+ A+++
Sbjct: 421 WARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSA 480
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
G ++ +F+ ++++ K + +I +SG+ +A ++ +M
Sbjct: 481 CSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 204/439 (46%), Gaps = 40/439 (9%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM-------- 177
LVS Y K + EAR VF+ M ERN+ +W+AM+ +E E LF+ M
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW 144
Query: 178 -VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN------------ 224
V G L D+ +I +A + ++ S + G+C RV+
Sbjct: 145 TVMFGGLIDD---GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 225 -----NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
+++ Y + + A+KLF+ M E+ V+W +++ G+ +G IE A ++F+ M
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
+ V + N +I + ++G A + ME D TW MI + +KG
Sbjct: 262 MKPV----IACNAMIVGFGEVGEISKARRVFDLMED----RDNATWRGMIKAYERKGFEL 313
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
ALDL +M GV P+ ++ ++H V+ DDV + L+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
MY KCG+L A+ +FD +D+ WN+II GY G +A ++F +M S + PN V
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T A++T +G ++ L++F+ +E + V ++ + ++GQ DKAM++
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 520 MQFFQIAPNSVTVLSILPA 538
M I P++ ++L A
Sbjct: 494 M---TIKPDATVWGALLGA 509
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 201/422 (47%), Gaps = 55/422 (13%)
Query: 213 IRHGMCSSIRVNNSI-MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQA 271
+R +S VN S ++ ++ G++ A+K F S+ + +WN+I++G+ NG ++A
Sbjct: 8 LRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA 67
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASY--NQLGRCDIAVDLMRKMESFGLTPD--VYTWSS 327
R+ FD M E V V+WN L++ Y N++ ++ F L P+ V +W++
Sbjct: 68 RQLFDEMSERNV----VSWNGLVSGYIKNRM--------IVEARNVFELMPERNVVSWTA 115
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
M+ G+ Q+G A L +M E N ++ +++ M
Sbjct: 116 MVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLY----DMM 167
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
V DV+ ++I + G ++ A+ IFD M ER+V +W T+I GY A +LF
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK---------------------RIEK 486
M + V+W +++ GY SG + A + F+ I K
Sbjct: 228 VMPEKTE----VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISK 283
Query: 487 DGKI-----KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
++ R+ A+W +I + + G + +A+ +F +MQ + P+ +++SIL A
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIM 601
L + + +++H +R ++ V+++L+ Y K G L+ ++ +FD KDII WN +
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 602 LS 603
+S
Sbjct: 404 IS 405
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 33/319 (10%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL------------ 108
LC G + +A I D + E+ +T+ ++ + ++V R+L
Sbjct: 182 LCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 109 ------HARIGLVGNVNPFVET----------KLVSMYSKCGHLSEARKVFDEMRERNLF 152
+ G + + F E ++ + + G +S+AR+VFD M +R+
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 153 TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
TW MI A R+ E +DLF M + G P L IL C L+ GR +H+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR 272
+R + V + +M +Y KCGE+ AK +F +D + WN+II+G+ +G E+A
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISG 331
K F M G P VT ++ + + G+ + +++ MES F +TP V +S +
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 332 FTQKGRTYHALDLLRKMLL 350
+ G+ A++L+ M +
Sbjct: 478 LGRAGQVDKAMELIESMTI 496
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 157/379 (41%), Gaps = 44/379 (11%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
+++ + ID I+ R+L+ + + V T ++ + G + EAR +FDEM
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVV---ASTNMIGGLCREGRVDEARLIFDEM 198
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
RERN+ TW+ MI + + LF M E +L G +E
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAE 254
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
V + + N+++ + + GE+ A+++F M++RD+ TW +I + + G
Sbjct: 255 EFFEVMPMKPVIAC----NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 267 DIEQARKYFDAMQEEGVEPGLVTW-NIL-----IAS-------YNQLGRC----DIAV-- 307
+A F MQ++GV P + +IL +AS + L RC D+ V
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 308 ----------DLMRKMESFGL--TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
+L++ F + D+ W+S+ISG+ G AL + +M SG P
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 356 NSITVXXXXXXXXXXXXXXXXXEI-HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
N +T+ EI + K + V + +DM + G ++ A +
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 415 FD-MMYERDVYSWNTIIGG 432
+ M + D W ++G
Sbjct: 491 IESMTIKPDATVWGALLGA 509
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 208/444 (46%), Gaps = 29/444 (6%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
L A +M+E N+F ++A+ ++L+ M+R P + +++A
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
G + + + G +++ +++ Y+ G + A+K+F M ERD + W
Sbjct: 881 SSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAW 938
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
+++ + + D++ A + M E+ T N LI Y LG + A L +M
Sbjct: 939 TTMVSAYRRVLDMDSANSLANQMSEKNE----ATSNCLINGYMGLGNLEQAESLFNQMP- 993
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
D+ +W++MI G++Q R A+ + KM+ G+ P+ +T+
Sbjct: 994 ---VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 1050
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH 435
E+H ++ V DV G++L+DMYSKCG LE A +F + +++++ WN+II G
Sbjct: 1051 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA 1110
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
GF +A ++F KM+ PN VT+ ++ T +G D+ +++ + D I NV
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA 555
+ ++ F ++G +A+++ M+F PN+V ++L C
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNMEF---EPNAVIWGALLDG---------------CR 1212
Query: 556 LRRNLV-SEISVSNILIDSYAKSG 578
+ +NLV +EI+ + +++ SG
Sbjct: 1213 IHKNLVIAEIAFNKLMVLEPMNSG 1236
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L++ Y G+L +A +F++M +++ +W+ MI S+ K + E + +FY M+ G +PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
E + ++ AC G LE G+ +H +++G + + ++++ +Y+KCG + A +F
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
++ +++ WN+II G +G ++A K F M+ E V+P VT+ + + G D
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 306 AVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+ R M + + + +V + M+ F++ G Y AL+L+ M EPN++
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEF---EPNAV 1202
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 23/316 (7%)
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N I + R D+AV M +M+ P+V+ ++++ GF +L+L +ML
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIH----GIGVKMSLVDDVLTGNSLIDMYSKCG 406
V P+S T + H G G + + +LID YS G
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKI------QTTLIDFYSATG 918
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
+ A+++FD M ERD +W T++ Y A L +M S N T N LI
Sbjct: 919 RIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM----SEKNEATSNCLIN 974
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
GYM G +QA LF ++ +++ SW ++I G+ Q+ + +A+ +F +M I
Sbjct: 975 GYMGLGNLEQAESLFNQMPV-----KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
P+ VT+ +++ A A+L + KE+H L+ V ++ + + L+D Y+K G+L + +
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 587 FDGLPLKDIISWNIML 602
F LP K++ WN ++
Sbjct: 1090 FFNLPKKNLFCWNSII 1105
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 141/362 (38%), Gaps = 73/362 (20%)
Query: 105 GRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
G L A I G + ++T L+ YS G + EARKVFDEM ER+ W+ M+ A R
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
V+D+ L + ++ ++ S+ +
Sbjct: 948 ------VLDMD----------------------------SANSLANQMSEKNEATSNCLI 973
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N Y G + A+ LF M +D ++W +I G+ QN +A F M EEG+
Sbjct: 974 NG-----YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT------------------- 324
P VT + +I++ LG +I ++ G DVY
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 325 ------------WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
W+S+I G G AL + KM + V+PN++T
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 373 XXXXXEIHGIGV-KMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTII 430
I+ + S+V +V ++ ++SK G + EA + I +M +E + W ++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 431 GG 432
G
Sbjct: 1209 DG 1210
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIH 552
NV +N+L GF+ ++++++ RM ++P+S T S++ A + A + + +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQ 892
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ + + LID Y+ +G + +R++FD +P +D I+W M+S
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS 943
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RI 112
A + L NG +A+ + QG K+ + ++L +C I G+++HA R
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
++ +V + L+ MY KC L A+ VFD M+++N+ +W+AM+ + EE V
Sbjct: 300 NFQDHI--YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+F DM R G PD + L + + AC LE G H AI G+ + V+NS++ +Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
KCG++ + +LF M+ RD+V+W A+++ + Q G + + FD M + G++P VT
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 293 LIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+I++ ++ G + + M S +G+ P + +S MI F++ GR A+ + M
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/586 (23%), Positives = 244/586 (41%), Gaps = 129/586 (22%)
Query: 99 RDCIEVGRELHARI-----GLVGNVNPFVET----KLVSMYSKCGHLSEARKVFDEMRER 149
+ CI +G +R G + P+ ET +V Y+ + AR+VFD + +
Sbjct: 11 KQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQP 70
Query: 150 NLFTWSAMIGACSR-------EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKC--- 199
NLF+W+ ++ A S+ E ++E++ D D V L + + L ++ A K
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPD--RDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 200 ------------------------GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
G + G+ IH I+ G S + V + ++ +YA G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ AKK+F +D+R++V +N+++ G G IE A + F M+++ V+W +I
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-----VSWAAMIK 243
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
Q G A++ R+M+ GL D Y + S++ G
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG-------------- 289
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
+IH ++ + D + G++LIDMY KC L A+ +F
Sbjct: 290 ---------------------KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN------------------ 457
D M +++V SW ++ GY G +A ++F+ MQ S P+
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 458 -----------------VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
V N+L+T Y + G D + LF + R+ SW ++
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN-----VRDAVSWTAM 443
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAF--ANLVAGKKVKEIHCCALRR 558
++ + Q G+ + +Q+F +M + P+ VT+ ++ A A LV K +
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE-KGQRYFKLMTSEY 502
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL-KDIISWNIMLS 603
+V I + +ID +++SG L + R +G+P D I W +LS
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 207/495 (41%), Gaps = 64/495 (12%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
N F L+ YSK G +SE F+++ +R+ TW+ +I S V + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 179 RHGFLPD--EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
R F + L +L+ G + G+ IH I+ G S + V + ++ +YA G
Sbjct: 131 RD-FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 237 MGFAKKLFKSMD------------------------------ERDSVTWNAIITGFCQNG 266
+ AKK+F +D E+DSV+W A+I G QNG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR---------CDIAVDLMRKMESFG 317
++A + F M+ +G++ + ++ + LG C I + +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 318 LTPDVY----------------------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
D+Y +W++M+ G+ Q GR A+ + M SG++P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
+ T+ + HG + L+ V NSL+ +Y KCGD++ + R+F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+ M RD SW ++ Y G + +LF KM P+ VT +I+ ++G +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
+ FK + + I ++ ++ +I F +SG+ ++AM+ M F A T+LS
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 536 LPAFANLVAGKKVKE 550
NL GK E
Sbjct: 550 CRNKGNLEIGKWAAE 564
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 179/412 (43%), Gaps = 72/412 (17%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDE 145
+T M +L+ + +G+++H ++ +G V + L+ MY+ G +S+A+KVF
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 146 MRERN----------------------LF--------TWSAMIGACSREKSWEEVVDLFY 175
+ +RN LF +W+AMI ++ +E ++ F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
+M G D++ +L ACG G + G+ IH+ IR I V ++++ +Y KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP---------- 285
+ +AK +F M +++ V+W A++ G+ Q G E+A K F MQ G++P
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 286 ---------------------GLVTW----NILIASYNQLGRCDIAVDLMRKMESFGLTP 320
GL+ + N L+ Y + G D + L +M
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN----VR 435
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
D +W++M+S + Q GR + L KM+ G++P+ +T+
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 381 GIGV-KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD-MMYERDVYSWNTII 430
+ + +V + + +ID++S+ G LE A R + M + D W T++
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 239/535 (44%), Gaps = 48/535 (8%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI-- 112
+++ +LC G L++A+ IL+S P Y +LLQ+C G + HA +
Sbjct: 30 QSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVK 89
Query: 113 -GLVGNVNPFVETKLVSMYSKCG-HLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEV 170
GL + N V L+S+Y K G + E R+VFD ++ +W++M+ K +
Sbjct: 90 SGLETDRN--VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKA 147
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+++F +MV G +EF L ++AC + G++ GR H V I HG + +++++ +
Sbjct: 148 LEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYL 207
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE-EGVEPGLVT 289
Y E A+++F M E D + W A+++ F +N E+A F AM +G+ P T
Sbjct: 208 YGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDV--------------------------- 322
+ ++ + L R ++ K+ + G+ +V
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS 327
Query: 323 ----YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
+WS+++ G+ Q G A+++ R+M E + E
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKE 383
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IHG V+ +V+ ++LID+Y K G +++A R++ M R++ +WN ++ G
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+A F M P+ +++ A++T +G D+ + F + K IK ++
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL--PAFANLVAGKKVKEI 551
+I ++G ++A + R + N ++ +L P AN A + + I
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAE----CRNDASLWGVLLGPCAANADASRVAERI 554
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 202/466 (43%), Gaps = 45/466 (9%)
Query: 70 AVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVS 128
A+ + + G T + +++C + + +GR H + G N F+ + L
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 129 MYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEF 187
+Y +AR+VFDEM E ++ W+A++ A S+ +EE + LFY M R G +PD
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
+L ACG L+ G+ IH I +G+ S++ V +S++ +Y KCG + A+++F M
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE-------------------------- 281
+++SV+W+A++ G+CQNG+ E+A + F M+E+
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 282 -----GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
G ++ + LI Y + G D A + KM ++ TW++M+S Q G
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNG 442
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
R A+ M+ G++P+ I+ E V M+ + G
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISF---IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 397 S----LIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
+ID+ + G E A+ + + R D W ++G + E K
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
P +++ L Y G AL++ K + + G K SW
Sbjct: 560 ELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSW 605
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 48/360 (13%)
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
+ G+E N L++ Y +LG + R++ D +W+SM+SG+
Sbjct: 89 KSGLETDRNVGNSLLSLYFKLGP---GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHV 145
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
AL++ +M+ G++ N T+ HG+ + + ++L
Sbjct: 146 KALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC---------------HAG------- 437
+Y + A+R+FD M E DV W ++ + H G
Sbjct: 206 YLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDG 265
Query: 438 --------FCG------KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
CG + E+ K+ + NVV ++L+ Y + G+ +A +F
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF-- 323
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
+G K+N SW++L+ G+ Q+G+ +KA++IFR M+ + ++L A A L
Sbjct: 324 ---NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLA 376
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
A + KEIH +RR + V + LID Y KSG + + R++ + ++++I+WN MLS
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 15/274 (5%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RI 112
A L C NG A+ I + E+ + +L++C + +G+E+H R
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
G GNV VE+ L+ +Y K G + A +V+ +M RN+ TW+AM+ A ++ EE V
Sbjct: 392 GCFGNV--IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVY 231
F DMV+ G PD IL ACG G ++ GR +A +G+ + ++ +
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL 509
Query: 232 AKCGEMGFAKKLFKSMDER-DSVTWNAIITGFCQNGDIEQ-ARKYFDAMQEEGVEPGLVT 289
+ G A+ L + + R D+ W ++ N D + A + M E +EP
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME--LEPKYHM 567
Query: 290 WNILIAS-YNQLGRCDIAVDLMRKMESFGLTPDV 322
+L+++ Y +GR A+++ + M G+ V
Sbjct: 568 SYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 226/464 (48%), Gaps = 66/464 (14%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEV--VDLFYDMVRHGFL-PDEFLLPKI 192
L A K+F++M +RN F+W+ +I S + + + LFY+M+ F+ P+ F P +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF-KSMDERD 251
L+AC K G ++ G+ IH +A+++G V ++++ +Y CG M A+ LF K++ E+D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 252 SVT-------------WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
V WN +I G+ + GD + AR FD M++ V V+WN +I+ Y+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYS 250
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
G AV++ R+M+ + P+ T S++ ++ G +L+L + L +
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG----SLELGEWLHLYAEDS--- 303
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
G++ +DDVL G++LIDMYSKCG +E A +F+ +
Sbjct: 304 ------------------------GIR---IDDVL-GSALIDMYSKCGIIEKAIHVFERL 335
Query: 419 YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQAL 478
+V +W+ +I G+ G G A + F KM+ + P+ V + L+T G ++
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 479 DLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
F ++ ++ + + ++ +SG D+A + M I P+ V ++L A
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGA 452
Query: 539 F---ANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
N+ GK+V I + + + +++SN+ YA GN
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNM----YASQGN 492
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 198/468 (42%), Gaps = 96/468 (20%)
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG----EMGFAKKL 243
L P+I C DL IH+V I+ G I+ A ++ +A K+
Sbjct: 26 LFPQI-NNCRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQA----RKYFDAMQEEGVEPGLVTWNILIASYNQ 299
F M +R+ +WN II GF ++ D ++A +++ M +E VEP T+ ++ + +
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G+ + +G D + S+++ + G A L K + +E + +
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI---IEKDMVV 197
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
+ + +++ N +ID Y + GD +AA+ +FD M
Sbjct: 198 MTD----------------------RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235
Query: 420 ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT------------------W 461
+R V SWNT+I GY GF A E+F +M+ D PN VT W
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295
Query: 462 -----------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
+ALI Y + G ++A+ +F+R+ ++ NV +W+++I GF
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-----NVITWSAMINGF 350
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
GQ A+ F +M+ + P+ V +++L A ++ G V+E RR +
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH---GGLVEE-----GRRYFSQMV 402
Query: 565 SVSNI---------LIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
SV + ++D +SG L + +P+K D + W +L
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 169/394 (42%), Gaps = 86/394 (21%)
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQ-----AR 272
C +IR + I AV+ K G+M RD++ A I FC D+ A
Sbjct: 33 CRTIRDLSQIHAVFIKSGQM------------RDTLA-AAEILRFCATSDLHHRDLDYAH 79
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
K F+ M + + ++W+++I GF
Sbjct: 80 KIFNQMPQR---------------------------------------NCFSWNTIIRGF 100
Query: 333 TQ--KGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
++ + + A+ L +M+ VEPN T +IHG+ +K
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
D ++L+ MY CG ++ A+ +F + II ++ +
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLF----------YKNII-----------EKDMVVMT 199
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
+V WN +I GYM+ G A LF ++ + R+V SWN++I+G+ +G
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ-----RSVVSWNTMISGYSLNGF 254
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNI 569
A+++FR M+ I PN VT++S+LPA + L + + + +H A + + + +
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
LID Y+K G + + +F+ LP +++I+W+ M++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMIN 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
++ Y + G AR +FD+MR+R++ +W+ MI S +++ V++F +M + P+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
L +L A + G LE G +H A G+ + ++++ +Y+KCG + A +F+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
+ + +TW+A+I GF +G A F M++ GV P V + L+ + + G +
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 306 AVDLMRKMESF-GLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+M S GL P + + M+ + G A + + M
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
NG DAV + + + + +T +++L + +E+G LH G ++ +
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ L+ MYSKCG + +A VF+ + N+ TWSAMI + + +D F M + G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P + +L AC G +E GR S + G+ I ++ + + G + A+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 242 KLFKSMDER-DSVTWNAIITGFCQNGDIEQARK 273
+ +M + D V W A++ G++E ++
Sbjct: 432 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A +N +G DA+ + + G + + Y+NLL +C +E GR +++ V
Sbjct: 345 AMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV 404
Query: 116 GNVNPFVETK--LVSMYSKCGHLSEARKVFDEMRER-NLFTWSAMIGACSREKSWE---E 169
+ P +E +V + + G L EA + M + + W A++GAC + + E
Sbjct: 405 DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464
Query: 170 VVDLFYDMVRH 180
V ++ DMV H
Sbjct: 465 VANILMDMVPH 475
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 222/514 (43%), Gaps = 44/514 (8%)
Query: 79 EQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLS 137
E K+ TY L C +R +++G LH + + G + F+ L+ MYSKCG L
Sbjct: 141 EANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLD 200
Query: 138 EARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
+A +FD ER+ +W+++I R + EE ++L M R G + L +L+AC
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC- 259
Query: 198 KC-----GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
C G +E G IH + GM I V +++ +YAK G + A KLF M ++
Sbjct: 260 -CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Query: 253 VTWNAIITGFCQNGDI-----EQARKYFDAMQEEGVEPGLVTWNILI-----ASYNQLGR 302
VT+NA+I+GF Q +I +A K F MQ G+EP T+++++ A + GR
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 303 ------CD--------IAVDLMR----------KMESFGLTP--DVYTWSSMISGFTQKG 336
C I L+ M+ F T D+ +W+SMI Q
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
+ A DL R++ S + P TV +I G +K +
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
S I MY+K G++ A ++F + DV +++ +I G +A +F M+ P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
N + ++ G Q L F+ ++ D +I N + L+ ++G+ A +
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
F +LS + + V GK+V E
Sbjct: 619 ILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAE 652
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 211/479 (44%), Gaps = 69/479 (14%)
Query: 129 MYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFL 188
MY KC L AR++FD M ERN+ +++++I ++ +E+ ++LF + D+F
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
L CG+ DL+ G L+H + + +G+ + + N ++ +Y+KCG++ A LF D
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG------------------VEPGLVTW 290
ERD V+WN++I+G+ + G E+ M +G + G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 291 NILIASYN-QLG-RCDIAV------------DLMRKMESFGLTP--DVYTWSSMISGFTQ 334
+ I Y +LG DI V L ++ F L P +V T+++MISGF Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 335 KGR-----TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
+ A L M G+EP+ T +IH + K +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
D G++LI++Y+ G E + F ++D+ SW ++I + A++LF ++
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 450 QDSDSPPNVVT----------WNALITG-YMQSGAEDQALDLFKRIE--------KDGKI 490
S P T + AL +G +Q A +D F ++ K G +
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 491 -----------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+VA+++++I+ Q G ++A+ IF M+ I PN L +L A
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 218/485 (44%), Gaps = 77/485 (15%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+ Q K G + G+L H I+ + + + N+++ +Y KC E+GFA++LF M ER+
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW--------------------- 290
+++N++I+G+ Q G EQA + F +E ++ T+
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 291 --------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
N+LI Y++ G+ D A+ L + + D +W+S+ISG+ + G
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE----RDQVSWNSLISGYVRVG 228
Query: 337 RTYHALDLLRKMLLSGVEPNSI---TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
L+LL KM G+ + +V IH K+ + D++
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG-----FCGKAYELFMK 448
+L+DMY+K G L+ A ++F +M ++V ++N +I G+ +A++LFM
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 449 MQDSDSPPNVVTWNALITG-----YMQSGAEDQALDLFKRIEKDGKI------------- 490
MQ P+ T++ ++ ++ G + AL + D I
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 491 ------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
K+++ASW S+I +Q+ Q + A +FR++ I P TV ++ A
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 539 FANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISW 598
A+ A ++I A++ + + SV I YAKSGN+ + ++F + D+ ++
Sbjct: 469 CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATY 528
Query: 599 NIMLS 603
+ M+S
Sbjct: 529 SAMIS 533
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 145/295 (49%), Gaps = 7/295 (2%)
Query: 68 SDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKL 126
S+A + + +G + P T+ +L++C +E GR++HA I + F+ + L
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
+ +Y+ G + + F ++++ +W++MI + + E DLF + P+E
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
+ + ++ AC L +G I AI+ G+ + V S +++YAK G M A ++F
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-NILIASYNQLGRCDI 305
+ D T++A+I+ Q+G +A F++M+ G++P + +LIA + G
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG-GLVTQ 578
Query: 306 AVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+ + M++ + + P+ ++ ++ + GR A +L+ L SG + + +T
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLI---LSSGFQDHPVT 630
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 48/336 (14%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSC---IDRDCIEVGRELHARIGLVG-NVNP 120
G + + +L + G + ++L++C ++ IE G +H +G +
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR-----EKSWEEVVDLFY 175
V T L+ MY+K G L EA K+F M +N+ T++AMI + +++ E LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
DM R G P +L+AC LE GR IH++ ++ S + ++++ +YA G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL-- 293
+ F S ++D +W ++I QN +E A F + + P T +++
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 294 ---------------------------------IASYNQLGRCDIAVDLMRKMESFGLTP 320
I+ Y + G +A + ++++ P
Sbjct: 468 ACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN----P 523
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
DV T+S+MIS Q G AL++ M G++PN
Sbjct: 524 DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
F+ TK+V K + A ++F+++ N+F ++++I A + + +V+ ++ ++R
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 181 GF-LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
F LPD F P + ++C G G+ +H + G +
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV------------------ 144
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
VT NA+I + + D+ A K FD M E V ++WN L++ Y +
Sbjct: 145 -------------VTENALIDMYMKFDDLVDAHKVFDEMYERDV----ISWNSLLSGYAR 187
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
LG+ A L M L + +W++MISG+T G A+D R+M L+G+EP+ I+
Sbjct: 188 LGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
+ IH + + N+LI+MYSKCG + A ++F M
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 420 ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALD 479
+DV SW+T+I GY + G A E F +MQ + PN +T+ L++ G + L
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 480 LFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
F + +D +I+ + + LI ++G+ ++A++I + M
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE-PNSITVXXXXXXXXXXXXXXXXX 377
P+V+ ++S+I +T + + +++L E P+ T
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGK 129
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
++HG K V+T N+LIDMY K DL A ++FD MYERDV
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV-------------- 175
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
++WN+L++GY + G +A LF + + + + SW
Sbjct: 176 ---------------------ISWNSLLSGYARLGQMKKAKGLFHLM-----LDKTIVSW 209
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
++I+G+ G +AM FR MQ I P+ ++++S+LP+ A L + + K IH A R
Sbjct: 210 TAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAER 269
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
R + + V N LI+ Y+K G + + ++F + KD+ISW+ M+S
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 14/265 (5%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---ARIGLVGNVNPF 121
G +A+ + G + I+ +++L SC +E+G+ +H R G +
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG-- 277
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V L+ MYSKCG +S+A ++F +M +++ +WS MI + + ++ F +M R
Sbjct: 278 VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK 337
Query: 182 FLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
P+ +L AC G + G R + + + I ++ V A+ G++ A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 241 KKLFKSMDER-DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-YN 298
++ K+M + DS W ++++ G+++ A D + E +EP + +L+A+ Y
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDMGNYVLLANIYA 455
Query: 299 QLGRCDIAVDLMRKM---ESFGLTP 320
LG+ + V +RKM E+ TP
Sbjct: 456 DLGKWE-DVSRLRKMIRNENMKKTP 479
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 210/464 (45%), Gaps = 33/464 (7%)
Query: 105 GRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
GR +H + + G + + + +V MY K + +ARKVFD M E++ W+ MI +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 164 EKSWEEVVDLFYDMVRHGFLP-DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ + E + +F D++ D L IL A + +L G IHS+A + G S
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
V +++Y+KCG++ LF+ + D V +NA+I G+ NG+ E + F + G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 283 VE------------PGLVTWNILIASY----NQLGRCDIAVDL------MRKMES----F 316
G + I Y N L ++ L + ++ES F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 317 GLTPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
+P+ + +W++MISG+TQ G T A+ L R+M S PN +T+
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC 434
+H + + +LI MY+KCG + A+R+FD+M +++ +WNT+I GY
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
G +A +F +M +S P VT+ ++ +G + ++F + + +V
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+ ++ ++G +A+Q M I P S ++L A
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAM---SIEPGSSVWETLLGA 598
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 243/571 (42%), Gaps = 87/571 (15%)
Query: 107 ELHARIGLVGNVNPF-VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
+ HA+I L G N + TKL S G + AR +F ++ ++F ++ ++ S +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 166 SWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
S + +F + + L P+ + A D GR+IH A+ G S + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG-DIEQARKYFDAMQEE-- 281
++I+ +Y K + A+K+F M E+D++ WN +I+G+ +N +E + + D + E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 282 --------GVEPGLVTWNIL-------------------------IASYNQLGRCDIAVD 308
+ P + L I+ Y++ G+ +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
L R+ PD+ +++MI G+T G T +L L ++++LSG S T+
Sbjct: 278 LFREFRK----PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
IHG +K + + +L +YSK ++E+A+++FD E+ + SWN
Sbjct: 334 HLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT------------------W--------- 461
+I GY G A LF +MQ S+ PN VT W
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 462 --------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
ALI Y + G+ +A LF D K+N +WN++I+G+ GQ +A
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLF-----DLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR-NLVSEISVSNILID 572
+ IF M I P VT L +L A ++ K+ EI + R + ++D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIIS-WNIML 602
++G+L + + + + ++ S W +L
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 22/312 (7%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVR--------PITYMNLLQSCIDRDCIEVGR 106
+A ++ SNG ++++ L G+++R P++ +L I C++
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF 350
Query: 107 ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS 166
HA V T L ++YSK + ARK+FDE E++L +W+AMI ++
Sbjct: 351 LSHAS----------VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS 226
E+ + LF +M + F P+ + IL AC + G L G+ +H + SSI V+ +
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
++ +YAKCG + A++LF M +++ VTWN +I+G+ +G ++A F M G+ P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
VT+ ++ + + G ++ M +G P V ++ M+ + G AL +
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 346 RKMLLSGVEPNS 357
M +EP S
Sbjct: 581 EAM---SIEPGS 589
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 209/441 (47%), Gaps = 55/441 (12%)
Query: 102 IEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI 158
+ +G+ LH+ + G+ +V V + L+SMY KCG + ARKVFDEM ERN+ TW+AMI
Sbjct: 62 VVLGKLLHSESIKFGVCSDV--MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMI 119
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGM 217
G LF ++ + ++++ GK ++E R L +
Sbjct: 120 GGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--- 173
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
+++ + ++ VY +M A+K F+ + E+++ W+ +++G+ + GD+ +AR F
Sbjct: 174 LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYR 233
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
+ LV WN LIA Y Q G D A+D M+ G PD T SS++S Q GR
Sbjct: 234 V----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
LD+ R E+H + + + N+
Sbjct: 290 ----LDVGR-------------------------------EVHSLINHRGIELNQFVSNA 314
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
LIDMY+KCGDLE A +F+ + R V N++I G +A E+F M+ D P+
Sbjct: 315 LIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 374
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+T+ A++T + G + L +F + K +K NV + LI +SG+ +A ++
Sbjct: 375 EITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLV 433
Query: 518 RRMQFFQIAPNSVTVLSILPA 538
+ M + PN + ++L A
Sbjct: 434 KEM---HVKPNDTVLGALLGA 451
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 130/286 (45%), Gaps = 66/286 (23%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG- 437
+H +K + DV+ G+SLI MY KCG + +A+++FD M ER+V +WN +IGGY G
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 438 ------------FC-------------------GKAYELF-------------------- 446
C KA ELF
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVY 187
Query: 447 ---MKMQDS-----DSP-PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
KM+D+ D P N W+ +++GY + G +A +F R+ R++ W
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-----FARDLVIW 242
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
N+LIAG+ Q+G D A+ F MQ P++VTV SIL A A +E+H
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
R + VSN LID YAK G+L + +F+ + ++ + N M+S
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMIS 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 5/260 (1%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
NG DA+ ++ +G + +T ++L +C ++VGRE+H+ I G +N FV
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
L+ MY+KCG L A VF+ + R++ ++MI + +E +++F M
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
PDE +L AC G L G I S + +++ ++ + + G++ A +
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 243 LFKSMDERDSVTWNAIITGFCQ-NGDIEQARKYFDAMQEEGVEPGLVTWNILIAS---YN 298
L K M + + T + G C+ + D E A + ++ G + N L + Y
Sbjct: 432 LVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYA 491
Query: 299 QLGRCDIAVDLMRKMESFGL 318
R A L +ME GL
Sbjct: 492 HTERWQTAEALRVEMEKRGL 511
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 201/420 (47%), Gaps = 16/420 (3%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQ 194
L AR++ E + F ++ ++ S V +F +M+R GF+ PD F +++
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 195 ACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVT 254
A L TG +H A++HG+ S + V +++ +Y CG + FA+K+F M + + V
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME 314
WNA+IT + D+ AR+ FD M + +WN+++A Y + G + A + +M
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP 230
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
D +WS+MI G G + R++ +G+ PN +++
Sbjct: 231 H----RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFE 286
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE-RDVYSWNTIIGGY 433
+HG K V N+LIDMYS+CG++ A+ +F+ M E R + SW ++I G
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
G +A LF +M P+ +++ +L+ +G ++ D F +++ I+
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKE 550
+ + ++ + +SG+ KA +M I P ++ T+L + N+ ++VK+
Sbjct: 407 IEHYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 146/286 (51%), Gaps = 11/286 (3%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXE 378
PD + +++++ G+++ ++++ + +M+ G V P+S + +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
+H +K L + G +LI MY CG +E A+++FD M++ ++ +WN +I
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
A E+F KM N +WN ++ GY+++G + A +F + R+ SW+
Sbjct: 188 VAGAREIFDKML----VRNHTSWNVMLAGYIKAGELESAKRIFSEMPH-----RDDVSWS 238
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
++I G +G +++ FR +Q ++PN V++ +L A + + + K +H +
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKD-IISWNIMLS 603
+SV+N LID Y++ GN+ +R +F+G+ K I+SW M++
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 136/264 (51%), Gaps = 5/264 (1%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
+ + ++ +C + + RE+ ++ LV N + +++ Y K G L A+++F EM
Sbjct: 173 VAWNAVITACFRGNDVAGAREIFDKM-LVRNHTSW--NVMLAGYIKAGELESAKRIFSEM 229
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
R+ +WS MI + S+ E F ++ R G P+E L +L AC + G E G+
Sbjct: 230 PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS-VTWNAIITGFCQN 265
++H + G + VNN+++ +Y++CG + A+ +F+ M E+ V+W ++I G +
Sbjct: 290 ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYT 324
G E+A + F+ M GV P +++ L+ + + G + D +M+ + + P++
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 409
Query: 325 WSSMISGFTQKGRTYHALDLLRKM 348
+ M+ + + G+ A D + +M
Sbjct: 410 YGCMVDLYGRSGKLQKAYDFICQM 433
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 378 EIHGIGVKMSL-VDDVLTGNSLIDMYSKCGD-LEAAQRIFDMMYERDVYSWNTIIGGYCH 435
+IHG+ +K + D TG ++ D L A+R+ E D + +NT++ GY
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSE 82
Query: 436 AGFCGKAYELFMKMQDSDSP-PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
+ + +F++M P+ ++ +I + + + K G ++ ++
Sbjct: 83 SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG-LESHL 141
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAF--ANLVAGKKVKEIH 552
+LI + G + A ++F M PN V +++ A N VAG +EI
Sbjct: 142 FVGTTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITACFRGNDVAG--AREIF 195
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
L RN S N+++ Y K+G L ++RIF +P +D +SW+ M+
Sbjct: 196 DKMLVRNHTS----WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMI 241
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 228/501 (45%), Gaps = 104/501 (20%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDE--MRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
+ T +VS Y G ++ AR VF++ + R+ ++AMI S ++LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRL-IHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M GF PD F +L D E + H+ A++ G V+N++++VY+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 236 E----MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE--EGVEPG--L 287
+ A+K+F + E+D +W ++TG+ +NG YFD +E EG++ L
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG-------YFDLGEELLEGMDDNMKL 251
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI-----SGFTQKGRTYHAL 342
V +N +I+ Y G A++++R+M S G+ D +T+ S+I +G Q G+ HA
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMY 402
L R+ S D NSL+ +Y
Sbjct: 312 VLRRE-------------------------------------DFSFHFD----NSLVSLY 330
Query: 403 SKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
KCG + A+ IF+ M +D+ SWN ++ GY +G G+A +F +M++ N+++W
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWM 386
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+I+G ++G ++ L LF ++++G + A +G ++S
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYA-----FSGAIKS--------------- 426
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMY 582
++L A+ N ++ H L+ S +S N LI YAK G +
Sbjct: 427 ----------CAVLGAYCN------GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 583 SRRIFDGLPLKDIISWNIMLS 603
+R++F +P D +SWN +++
Sbjct: 471 ARQVFRTMPCLDSVSWNALIA 491
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 208/533 (39%), Gaps = 86/533 (16%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCI-----DRDCIEV-GREL 108
+A + N A+ + + +G K T+ ++L ++ C++ L
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL 176
Query: 109 HARIGLVGNVNPFVETKLVSMYSKCGH----LSEARKVFDEMRERNLFTWS--------- 155
+ G + +V+ LVS+YSKC L ARKVFDE+ E++ +W+
Sbjct: 177 KSGAGYITSVS----NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 156 -----------------------AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKI 192
AMI ++E +++ MV G DEF P +
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
++AC G L+ G+ +H+ +R S +NS++++Y KCG+
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYYKCGK---------------- 335
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
++AR F+ M + LV+WN L++ Y G A + ++
Sbjct: 336 ---------------FDEARAIFEKMPAKD----LVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M+ ++ +W MISG + G L L M G EP
Sbjct: 377 MKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
+ H +K+ + GN+LI MY+KCG +E A+++F M D SWN +I
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
G +A +++ +M P+ +T ++T +G DQ F +E +I
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+ LI +SG+ A + + F A +LS N+ G
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 176/411 (42%), Gaps = 90/411 (21%)
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
L+ R +H I G + N ++ VY K E+ +A++LF + E D + +++G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+C +GDI AR F+ + V +N +I ++ A++L KM+ G PD
Sbjct: 90 YCASGDITLARGVFE--KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+T++S+++G L++ E + + H
Sbjct: 148 NFTFASVLAGLA---------------LVADDEKQCV-------------------QFHA 173
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGD----LEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
+K N+L+ +YSKC L +A+++FD + E+D SW T++ GY G
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
+ EL M D+ +V +NA+I+GY+ G +AL++ +R+ G I+ + ++
Sbjct: 234 YFDLGEELLEGMDDN---MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-IELDEFTY 289
Query: 498 NSLI-----AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIH 552
S+I AG LQ G K++H
Sbjct: 290 PSVIRACATAGLLQLG----------------------------------------KQVH 309
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
LRR S N L+ Y K G +R IF+ +P KD++SWN +LS
Sbjct: 310 AYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 235/502 (46%), Gaps = 69/502 (13%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHAR-- 111
+ + LN C + +SDAVA++D + E G K T+ L+ G LH +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH----------GLFLHNKAS 205
Query: 112 --IGLVGNV-----NPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMI 158
+ LV + P + T +V+ K G + A + +M E ++ ++ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ K ++ ++LF +M G PD F ++ G + S I +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKY 274
++ ++++ + K G++ A+KL+ M +R D T++++I GFC + +++A+
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
F+ M + P +VT++ LI + + R + ++L R+M GL + T++++I GF Q
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
+A + ++M+ GV PN +LT
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPN-----------------------------------ILT 470
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N L+D K G L A +F+ + E D+Y++N +I G C AG +ELF +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
PNV+ +N +I+G+ + G++++A L K++++DG + N ++N+LI L+ G +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP-NSGTYNTLIRARLRDGDR 589
Query: 511 DKAMQIFRRMQFFQIAPNSVTV 532
+ + ++ + M+ A ++ T+
Sbjct: 590 EASAELIKEMRSCGFAGDASTI 611
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 246/556 (44%), Gaps = 86/556 (15%)
Query: 67 LSDAVAILDSLAEQGS--KVRP----ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVN 119
LSD + + D++ G K RP + + LL + + E+ L ++ +G + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFY 175
+ + ++ + + LS A V +M E ++ T S+++ K + V L
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
MV G+ PD F LIH + + + ++ + + + V C
Sbjct: 178 QMVEMGYKPDTFTFTT---------------LIHGLFLHNKASEAVALVDQM--VQRGC- 219
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ D VT+ ++ G C+ GDI+ A M++ +E +V +N +I
Sbjct: 220 -------------QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
+ D A++L +M++ G+ PDV+T+SS+IS GR A LL M+ + P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
N V+T ++LID + K G L A++++
Sbjct: 327 N-----------------------------------VVTFSALIDAFVKEGKLVEAEKLY 351
Query: 416 DMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
D M +R D+++++++I G+C +A +F M D PNVVT++ LI G+ ++
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
++ ++LF+ + + G + N ++ +LI GF Q+ D A +F++M + PN +T
Sbjct: 412 KRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
+L K + R + +I NI+I+ K+G + +F L
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 592 LK----DIISWNIMLS 603
LK ++I++N M+S
Sbjct: 531 LKGVSPNVIAYNTMIS 546
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 245/551 (44%), Gaps = 28/551 (5%)
Query: 45 IRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQ----GSKVRPITYMNLLQSCIDRD 100
++S P+P + + N+L S + ++ SL EQ G TY + R
Sbjct: 75 VKSRPFPSIV--EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 101 CIEVGRELHARIGLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWS 155
+ + + A++ +G V + L++ Y +S+A + D+M E + FT++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
+I E V L MV+ G PD ++ K GD++ + +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQA 271
+ + + + N+I+ K M A LF MD + D T++++I+ C G A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ M E + P +VT++ LI ++ + G+ A L +M + PD++T+SS+I+G
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
F R A + M+ PN +T E+ + LV +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFM 447
+T +LI + + D + AQ +F M V+ ++N ++ G C G KA +F
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+Q S P++ T+N +I G ++G + +LF + G + NV ++N++I+GF +
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRK 551
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKK------VKEIHCCALRRNLV 561
G K++A + ++M+ PNS T +++ A L G + +KE+ C +
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDAS 609
Query: 562 SEISVSNILID 572
+ V+N+L D
Sbjct: 610 TIGLVTNMLHD 620
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 234/497 (47%), Gaps = 49/497 (9%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG- 116
+N C G +S+AVA++D + E + +T L+ + + L R+ G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVD 172
+ +++ K G+ + A +F +M ERN+ +S +I + ++ S+++ +
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
LF +M G D ++ G + G + I + + ++++ V+
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
K G++ AK+L+ M R D++T+N++I GFC+ + +A + FD M +G EP +V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T++ILI SY + R D + L R++ S GL P+ T+++++ GF Q G+ A +L ++M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+ GV P+ +T +GI L+D G+L
Sbjct: 447 VSRGVPPSVVT--------------------YGI---------------LLDGLCDNGEL 471
Query: 409 EAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
A IF+ M + + +N II G C+A A+ LF + D P+VVT+N +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I G + G+ +A LF+++++DG + ++N LI L ++++ M+
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDF-TYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 525 IAPNSVTVLSILPAFAN 541
+ +S T+ ++ ++
Sbjct: 591 FSADSSTIKMVIDMLSD 607
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 203/463 (43%), Gaps = 40/463 (8%)
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
E +++T + MI R+K + + G+ PD ++
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-------------- 147
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
+G C RV+ ++ V ++ + D VT + +I G C G
Sbjct: 148 -------NGFCLEGRVSEAVALV----------DRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+ +A D M E G +P VT+ ++ + G +A+DL RKME + V +S
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I + G AL L +M + G++ + +T ++ + +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAY 443
++ DV+T ++LID++ K G L A+ +++ M R D ++N++I G+C +A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
++F M P++VT++ LI Y ++ D + LF+ I G I N ++N+L+ G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLG 429
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
F QSG+ + A ++F+ M + P+ VT +L + K EI + +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
I + NI+I + + + +F L K D++++N+M+
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 163/344 (47%), Gaps = 9/344 (2%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+ A F++M + P + +N L ++ + + D+ + + ME G+ D+YT +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
MI+ + +K + A +L + G EP++IT + V+M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAY 443
D++T ++LI+ G + A + D M ++ D ++ ++ C +G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
+LF KM++ + +VV ++ +I + G+ D AL LF +E G IK +V +++SLI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGG 289
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
G+ D ++ R M I P+ VT +++ F + KE++ + R + +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
N LID + K L + ++FD + K DI++++I+++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 48/372 (12%)
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+GF K + + E D T +I +C+ + A + G EP +T++ L+
Sbjct: 90 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+ GR AV L+ +M PD+ T S++I+G KGR AL L+ +M+ G +P+
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
+T +++ K G+ A +F
Sbjct: 210 EVTY-----------------------------------GPVLNRLCKSGNSALALDLFR 234
Query: 417 MMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
M ER+ V ++ +I C G A LF +M+ +VVT+++LI G G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 473 AEDQALDLFKRIEKDGKIKRN----VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
D + + + I RN V ++++LI F++ G+ +A +++ M IAP+
Sbjct: 295 KWDDGAKMLREM-----IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
++T S++ F + ++ + + +I +ILI+SY K+ + R+F
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 589 GLPLKDIISWNI 600
+ K +I I
Sbjct: 410 EISSKGLIPNTI 421
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 44/314 (14%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ G L +A + + + +G ITY +L+ +C
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC-------------- 365
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVV 171
L EA ++FD M E ++ T+S +I + + K ++ +
Sbjct: 366 --------------------LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
LF ++ G +P+ ++ + G L + + + G+ S+ ++
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 232 AKCGEMGFAKKLFKSMDERDSVT-----WNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
GE+ A ++F+ M ++ +T +N II G C ++ A F ++ ++GV+P
Sbjct: 466 CDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+VT+N++I + G A L RKM+ G TPD +T++ +I +++L+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 347 KMLLSGVEPNSITV 360
+M + G +S T+
Sbjct: 585 EMKVCGFSADSSTI 598
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 210/443 (47%), Gaps = 50/443 (11%)
Query: 85 RP--ITYMNLLQSCIDRDC-----IEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLS 137
RP TY L + C D + +G L R+ LV +V+ + M++ CG +
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVH----NASIHMFASCGDME 208
Query: 138 EARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
ARKVFDE R+L +W+ +I + E+ + ++ M G PD+ + ++ +C
Sbjct: 209 NARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
GDL G+ + +G+ +I + N++M +++KCG++ A+++F ++++R V+W
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG 317
+I+G+ + G ++ +RK FD M+E+ V V WN +I Q R A+ L ++M++
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDV----VLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 318 LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
PD T +S +Q G ALD+ G+
Sbjct: 385 TKPDEITMIHCLSACSQLG----ALDV-------GI------------------------ 409
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
IH K SL +V G SL+DMY+KCG++ A +F + R+ ++ IIGG G
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A F +M D+ P+ +T+ L++ G D F +++ + + +
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 498 NSLIAGFLQSGQKDKAMQIFRRM 520
+ ++ ++G ++A ++ M
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESM 552
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 219/526 (41%), Gaps = 84/526 (15%)
Query: 118 VNPFVETKLVSM--YSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
++PF ++L++ S+ +L + K+ + N+F+W+ I S ++ +E L+
Sbjct: 83 LDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYK 142
Query: 176 DMVRHGFL---PDEFLLPKILQACGKCGDLETGRLI--HSVAIRHGMCSSIRVNNSIMAV 230
M+RHG PD F P + + C G +I H + +R + S V+N+ + +
Sbjct: 143 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVS--HVHNASIHM 200
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
+A CG D+E ARK FD E LV+W
Sbjct: 201 FASCG-------------------------------DMENARKVFD----ESPVRDLVSW 225
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N LI Y ++G + A+ + + MES G+ PD T ++S + G + +
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
+G+ V I K ++V + ++I Y++CG L+
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGYARCGLLDV 341
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
++++FD M E+DV WN +IGG A A LF +MQ S++ P+ +T ++ Q
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 471 SGAEDQALDLFKRIEK------------------------------DGKIKRNVASWNSL 500
GA D + + + IEK G RN ++ ++
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN---LVAGKKVKEIHCCALR 557
I G G A+ F M IAP+ +T + +L A + + G+ R
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY--FSQMKSR 519
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
NL ++ +I++D ++G L + R+ + +P++ D W +L
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLV 127
DA+A+ + +K IT ++ L +C ++VG +H I ++N + T LV
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 128 SMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEF 187
MY+KCG++SEA VF ++ RN T++A+IG + + F +M+ G PDE
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 188 LLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
+L AC G ++TGR + R + ++ + ++ + + G + A +L +S
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 247 MD-ERDSVTWNAIITGFCQNGDIEQARK 273
M E D+ W A++ G +G++E K
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEK 579
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS---DSPPNVVTWNAL 464
L+ + +I + +++SWN I G+ + +++ L+ +M +S P+ T+ L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 465 IT----------GYMQSG------------AEDQALDLFK--------RIEKDGKIKRNV 494
G+M G + ++ +F R D R++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
SWN LI G+ + G+ +KA+ +++ M+ + P+ VT++ ++ + + L + KE +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L I + N L+D ++K G++ +RRIFD L + I+SW M+S
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF---QIAPNS 529
+E + LD +I K G N+ SWN I GF +S ++ ++++M + P+
Sbjct: 98 SESRYLDYSVKILK-GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDH 156
Query: 530 VTVLSILPAFANLVAGKKVKEI--HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
T + A+L I H LR LVS V N I +A G++ +R++F
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSH--VHNASIHMFASCGDMENARKVF 214
Query: 588 DGLPLKDIISWNIMLS 603
D P++D++SWN +++
Sbjct: 215 DESPVRDLVSWNCLIN 230
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 249/545 (45%), Gaps = 83/545 (15%)
Query: 93 LQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCG---HLSEARKVFDEMRER 149
L++C D +++ + GL +V+ TKLV+ + G LS A++VF+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTI--TKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 150 -NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
F ++++I + E + LF M+ G PD++ P L AC K G I
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H + ++ G + V NS++ YA+CGE+ A+K+F M ER+ V+W ++I G+ +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 269 EQARK-YFDAMQEEGVEPGLVTWNILIASYNQLG-------------------------- 301
+ A +F +++E V P VT +I++ +L
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 302 ------RCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+C+ A+D+ +++ + +G + ++ ++M S + ++G T AL + M+ SGV
Sbjct: 277 LVDMYMKCN-AIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ I++ HG ++ N+LIDMY KC + A RI
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
FD M S VVTWN+++ GY+++G
Sbjct: 395 FDRM-----------------------------------SNKTVVTWNSIVAGYVENGEV 419
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAPNSVTVL 533
D A + F+ + + +N+ SWN++I+G +Q ++A+++F MQ + + + VT++
Sbjct: 420 DAAWETFETMPE-----KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
SI A +L A K I+ + + ++ + L+D +++ G+ + IF+ L +
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 594 DIISW 598
D+ +W
Sbjct: 535 DVSAW 539
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 233/545 (42%), Gaps = 76/545 (13%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-F 121
S+G ++A+ + + G T+ L +C G ++H I +G F
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-H 180
V+ LV Y++CG L ARKVFDEM ERN+ +W++MI +R ++ VDLF+ MVR
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN----SIMAVYAKCGE 236
P+ + ++ AC K DLETG +++ IR+ S I VN+ +++ +Y KC
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRN---SGIEVNDLMVSALVDMYMKCNA 286
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP----------- 285
+ AK+LF + NA+ + + + G +A F+ M + GV P
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 286 --------------------GLVTW----NILIASYNQLGRCDIAVDLMRKM-------- 313
G +W N LI Y + R D A + +M
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 314 -----------------ESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKML-LSGV 353
E+F P+ + +W+++ISG Q A+++ M GV
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+ +T+ I+ K + DV G +L+DM+S+CGD E+A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
IF+ + RDV +W IG AG +A ELF M + P+ V + +T G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
Q ++F + K + + ++ ++G ++A+Q+ M + PN V
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWN 643
Query: 534 SILPA 538
S+L A
Sbjct: 644 SLLAA 648
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 172/375 (45%), Gaps = 47/375 (12%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG---RCDIAVDLMRKMESFGLTPDVYT 324
I++ + + ++ ++G++ + T L+A +LG A ++ ES+G +
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT---CFM 101
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
++S+I G+ G A+ L +M+ SG+ P+ T +IHG+ V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
KM D+ NSL+ Y++CG+L++A+++FD M ER+V SW ++I GY F A +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 445 LFMKM-QDSDSPPNVVTW-----------------------------------NALITGY 468
LF +M +D + PN VT +AL+ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
M+ A D A LF D N+ N++ + +++ G +A+ +F M + P+
Sbjct: 282 MKCNAIDVAKRLF-----DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
+++LS + + + L K H LR S ++ N LID Y K + RIFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 589 GLPLKDIISWNIMLS 603
+ K +++WN +++
Sbjct: 397 RMSNKTVVTWNSIVA 411
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 203/419 (48%), Gaps = 37/419 (8%)
Query: 106 RELHARIGLVGNVNPFV-ETKLVSMYSKCGHLSEARKVFDEMR--ERNLFTWSAMIGACS 162
+++HA++ + G + V + L + Y + L A F+ + +RN +W+ ++ S
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 163 REKS--WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
+ K+ + +V+ L+ M RH D F L ++AC G LE G LIH +A+++G+
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKD 143
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
V S++ +YA+ G M A+K+F + R+SV W ++ G+ + + + F M++
Sbjct: 144 DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 281 EGVEPGLVTWNILIAS-----YNQLGRC----------------------DIAV-----D 308
G+ +T L+ + ++G+C D+ V D
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
RK+ + +V W+++ISGF + R A DL R+ML + PN T+
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
+HG ++ + D + S IDMY++CG+++ A+ +FDMM ER+V SW++
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSS 383
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKD 487
+I + G +A + F KM+ + PN VT+ +L++ SG + F+ + +D
Sbjct: 384 MINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 137/276 (49%), Gaps = 5/276 (1%)
Query: 77 LAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKC 133
+ + G + +T + L+++C + +VG+ +H R + + + +++ ++ MY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI-DQSDYLQASIIDMYVKC 259
Query: 134 GHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
L ARK+F+ +RN+ W+ +I ++ + E DLF M+R LP++ L IL
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV 253
+C G L G+ +H IR+G+ S + +YA+CG + A+ +F M ER+ +
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
+W+++I F NG E+A F M+ + V P VT+ L+++ + G M
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 314 -ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+G+ P+ ++ M+ + G A + M
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 172/385 (44%), Gaps = 45/385 (11%)
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
A++T Q + ++ + G E +V + L +Y Q R D A SF
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFAT------SSF 62
Query: 317 GLTP----DVYTWSSMISGFTQKGRTYHA--LDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
P + ++W++++SG+++ ++ L L +M +S +
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTII 430
IHG+ +K L D SL++MY++ G +E+AQ++FD + R+ W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI------------------------- 465
GY + + LF M+D+ + +T L+
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 466 --TGYMQSGAED-----QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
+ Y+Q+ D + LD +++ + + RNV W +LI+GF + + +A +FR
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKL-FETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 519 RMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
+M I PN T+ +IL + ++L + + K +H +R + + ID YA+ G
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 579 NLMYSRRIFDGLPLKDIISWNIMLS 603
N+ +R +FD +P +++ISW+ M++
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMIN 386
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 249/545 (45%), Gaps = 83/545 (15%)
Query: 93 LQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCG---HLSEARKVFDEMRER 149
L++C D +++ + GL +V+ TKLV+ + G LS A++VF+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTI--TKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 150 -NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
F ++++I + E + LF M+ G PD++ P L AC K G I
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H + ++ G + V NS++ YA+CGE+ A+K+F M ER+ V+W ++I G+ +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 269 EQARK-YFDAMQEEGVEPGLVTWNILIASYNQLG-------------------------- 301
+ A +F +++E V P VT +I++ +L
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 302 ------RCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+C+ A+D+ +++ + +G + ++ ++M S + ++G T AL + M+ SGV
Sbjct: 277 LVDMYMKCN-AIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ I++ HG ++ N+LIDMY KC + A RI
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 415 FDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
FD M S VVTWN+++ GY+++G
Sbjct: 395 FDRM-----------------------------------SNKTVVTWNSIVAGYVENGEV 419
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAPNSVTVL 533
D A + F+ + + +N+ SWN++I+G +Q ++A+++F MQ + + + VT++
Sbjct: 420 DAAWETFETMPE-----KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
SI A +L A K I+ + + ++ + L+D +++ G+ + IF+ L +
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 594 DIISW 598
D+ +W
Sbjct: 535 DVSAW 539
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 233/545 (42%), Gaps = 76/545 (13%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-F 121
S+G ++A+ + + G T+ L +C G ++H I +G F
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-H 180
V+ LV Y++CG L ARKVFDEM ERN+ +W++MI +R ++ VDLF+ MVR
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN----SIMAVYAKCGE 236
P+ + ++ AC K DLETG +++ IR+ S I VN+ +++ +Y KC
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRN---SGIEVNDLMVSALVDMYMKCNA 286
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP----------- 285
+ AK+LF + NA+ + + + G +A F+ M + GV P
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 286 --------------------GLVTW----NILIASYNQLGRCDIAVDLMRKM-------- 313
G +W N LI Y + R D A + +M
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 314 -----------------ESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKML-LSGV 353
E+F P+ + +W+++ISG Q A+++ M GV
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+ +T+ I+ K + DV G +L+DM+S+CGD E+A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
IF+ + RDV +W IG AG +A ELF M + P+ V + +T G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
Q ++F + K + + ++ ++G ++A+Q+ M + PN V
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWN 643
Query: 534 SILPA 538
S+L A
Sbjct: 644 SLLAA 648
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 172/375 (45%), Gaps = 47/375 (12%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG---RCDIAVDLMRKMESFGLTPDVYT 324
I++ + + ++ ++G++ + T L+A +LG A ++ ES+G +
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT---CFM 101
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
++S+I G+ G A+ L +M+ SG+ P+ T +IHG+ V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
KM D+ NSL+ Y++CG+L++A+++FD M ER+V SW ++I GY F A +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 445 LFMKM-QDSDSPPNVVTW-----------------------------------NALITGY 468
LF +M +D + PN VT +AL+ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
M+ A D A LF D N+ N++ + +++ G +A+ +F M + P+
Sbjct: 282 MKCNAIDVAKRLF-----DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
+++LS + + + L K H LR S ++ N LID Y K + RIFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 589 GLPLKDIISWNIMLS 603
+ K +++WN +++
Sbjct: 397 RMSNKTVVTWNSIVA 411
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 228/521 (43%), Gaps = 50/521 (9%)
Query: 74 LDSLAEQGSKVR-PITYMN-LLQSCIDRDCIEVGRELHARIGLVGNVNPFVE-----TKL 126
L SL + K PI +N LL+ C + + +G +HA + +V N + E L
Sbjct: 17 LASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHL-IVTNQSSRAEDAYQINSL 75
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG-FLPD 185
+++Y KC ARK+FD M ERN+ +W AM+ EV+ LF M G P+
Sbjct: 76 INLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPN 135
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
EF+ + ++C G +E G+ H +++G+ S V N+++ +Y+ C G A ++
Sbjct: 136 EFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLD 195
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL-----IASYNQL 300
+ D +++ ++G+ + G ++ D +++ E WN L + ++ L
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEG---LDVLRKTANED--FVWNNLTYLSSLRLFSNL 250
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA------------------- 341
++A+ + +M FG +V ++I+ + + G+ +A
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 342 ------------LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
L+L KM V PN T +HG+ +K
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
+ V+ GN+L++MY+K G +E A++ F M RD+ +WNT+I G H G +A E F +M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
+ PN +T+ ++ G +Q L F ++ K ++ ++ + ++ ++G
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
A R T+L+ N GKKV E
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE 531
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 155/304 (50%), Gaps = 6/304 (1%)
Query: 48 LPYPKF--MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG 105
LPY + L+ G + + +L A + +TY++ L+ + + +
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 106 RELHARIGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
++H+R+ G N VE L++MY KCG + A++VFD+ +N+F + ++ A +
Sbjct: 257 LQVHSRMVRFG-FNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+KS+EE ++LF M P+E+ +L + + L+ G L+H + ++ G + + V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N+++ +YAK G + A+K F M RD VTWN +I+G +G +A + FD M G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRK-MESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
P +T+ ++ + + +G + + + M+ F + PD+ ++ ++ ++ G A
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 343 DLLR 346
D +R
Sbjct: 496 DFMR 499
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 137/334 (41%), Gaps = 43/334 (12%)
Query: 308 DLMRKMESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXX 364
+ +R + F L P+ V +W +M+ G+ G + L L + M SG PN
Sbjct: 84 ETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY 424
+ HG +K L+ N+L+ MYS C A R+ D + D+
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW----------------------- 461
+++ + GY G + ++ K + D N +T+
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 462 ------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
ALI Y + G A +F D +N+ +++ + Q
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVF-----DDTHAQNIFLNTTIMDAYFQDKS 318
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNI 569
++A+ +F +M ++ PN T +L + A L K+ +H L+ + + V N
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L++ YAKSG++ +R+ F G+ +DI++WN M+S
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMIS 412
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 242/519 (46%), Gaps = 56/519 (10%)
Query: 33 RVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNL 92
+V AN Y +S + P + C+ + A+++L + + G + Y L
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 93 LQSCIDRDCIEVGRELHARIGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERN 150
+ S + + +L + L+G V P ET ++ K ++EA K+ + M R
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 151 L----FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
T+ ++ + + DLFY + + P+ + ++ G L+ +
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAK 373
Query: 207 LIHS-VAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITG 261
+ S + +G+ + NS++ Y K G +G A ++ M + + ++ ++ G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
FC+ G I++A + M +G++P V +N LI+++ + R AV++ R+M G PD
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
VYT++S+ISG + HAL LLR M+ GV N++T
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY--------------------- 532
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAG 437
N+LI+ + + G+++ A+++ + M + D ++N++I G C AG
Sbjct: 533 --------------NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
KA LF KM P+ ++ N LI G +SG ++A++ K + G ++ ++
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTF 637
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
NSLI G ++G+ + + +FR++Q I P++VT +++
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 220/505 (43%), Gaps = 43/505 (8%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
P + + ++S G + R FD + +IG ++ + L M
Sbjct: 88 PLNVSTSMELFSWTGSQNGYRHSFD--------VYQVLIGKLGANGEFKTIDRLLIQMKD 139
Query: 180 HGFLPDEFLLPKILQACGKCG-DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G + E L I++ K G +T RL+ + + + + N ++ +
Sbjct: 140 EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK 199
Query: 239 FAKKLFKSMDERDS----VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
A +F M R T+ ++ FC +I+ A M + G P V + LI
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
S ++ R + A+ L+ +M G PD T++ +I G + R A ++ +ML+ G
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
P+ IT ++ K +++ N+LI + G L+ A+ +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 415 FDMMYER-----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
M DV ++N++I GY G G A E+ M++ PNV ++ L+ G+
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS 529
+ G D+A ++ + DG +K N +N LI+ F + + +A++IFR M P+
Sbjct: 436 KLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 530 VTVLSILPAFANLVAGK-KVKEI-HCCALRRNLVSEISVS-----NILIDSYAKSGNLMY 582
T F +L++G +V EI H L R+++SE V+ N LI+++ + G +
Sbjct: 495 YT-------FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 583 SRR-----IFDGLPLKDIISWNIML 602
+R+ +F G PL D I++N ++
Sbjct: 548 ARKLVNEMVFQGSPL-DEITYNSLI 571
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 203/482 (42%), Gaps = 57/482 (11%)
Query: 139 ARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ 194
A VF +M R LFT+ ++ A + + L DM +HG +P+ + ++
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 195 ACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER---- 250
+ KC + + G N ++ K + A K+ M R
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
D +T+ ++ G C+ G ++ A+ F + + P +V +N LI + GR D A ++
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 311 RKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
M S+G+ PDV T++S+I G+ ++G AL++L M G +PN
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN------------- 423
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYS 425
V + L+D + K G ++ A + + M + +
Sbjct: 424 ----------------------VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+N +I +C +A E+F +M P+V T+N+LI+G + AL L + +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+G + N ++N+LI FL+ G+ +A ++ M F + +T S++
Sbjct: 522 SEGVVA-NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIM 601
K + + LR NILI+ +SG + + + L+ DI+++N +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 602 LS 603
++
Sbjct: 641 IN 642
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 155/359 (43%), Gaps = 47/359 (13%)
Query: 48 LPYPKFM--DAQLNQLCSNGPLSDAVAIL-DSLAEQGSKVRPITYMNLLQSCIDRDCIEV 104
+P P+ + + ++ ++G L DA A+L D + G TY +L+ + +
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 105 GRE-LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIG 159
E LH N + T LV + K G + EA V +EM + N ++ +I
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 160 ACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS 219
A +E E V++F +M R G PD + ++ + +++ + I G+ +
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSM----DERDSVTWNAII---------------- 259
+ N+++ + + GE+ A+KL M D +T+N++I
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 260 -------------------TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
G C++G +E+A ++ M G P +VT+N LI +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
GR + + + RK+++ G+ PD T+++++S + G Y A LL + + G PN T
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 214/463 (46%), Gaps = 40/463 (8%)
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
NL+T++ +I R + L M++ G+ P L +L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL--------------- 162
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
+G C R+++++ A+ + EMG+ D++T+ +I G +
Sbjct: 163 ------NGYCHGKRISDAV-ALVDQMVEMGY---------RPDTITFTTLIHGLFLHNKA 206
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
+A D M + G +P LVT+ +++ + G D+A +L+ KME+ + +V +S++
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
I + AL+L +M GV PN IT + ++ +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYE 444
+V+T N+LID + K G L A++++D M +R D+++++++I G+C +A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 445 LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
+F M D PNVVT+N LI G+ ++ D+ ++LF+ + + G + N ++ +LI GF
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTYTTLIHGF 445
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
Q+ D A +F++M + PN +T ++L +K + R + I
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
NI+I+ K+G + +F L LK D+I +N M+S
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 208/451 (46%), Gaps = 50/451 (11%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+ + LN C +SDAVA++D + E G + IT+ L+ + L R+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 114 LVGNVNPFVETKLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G P + T V + C G + A + ++M E N+ +S +I + + +
Sbjct: 218 QRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G P+ ++ + S I + ++ N++
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G++ A+KL+ M +R D T++++I GFC + +++A+ F+ M +
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + R D V+L R+M GL + T++++I GF Q +A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV PN ++T N+L+D
Sbjct: 457 VFKQMVSDGVHPN-----------------------------------IMTYNTLLDGLC 481
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K G LE A +F+ + E +Y++N +I G C AG ++LF + P+V+
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
+N +I+G+ + G +++A LF+++ +DG +
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 9/311 (2%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVG 116
++ LC DA+ + + +G + ITY +L+ C + R L I
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVD 172
N N L+ + K G L EA K++DEM +R ++FT+S++I +E
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+F M+ P+ ++ K ++ G + + G+ + +++ +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 233 KCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ + A+ +FK M + +T+N ++ G C+NG +E+A F+ +Q +EP +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+NI+I + G+ + DL + G+ PDV +++MISGF +KG A L RKM
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 349 LLSGVEPNSIT 359
G P+S T
Sbjct: 567 REDGPLPDSGT 577
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 148/328 (45%), Gaps = 32/328 (9%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
++ A F M + P + +N L+++ ++ + D+ + L KM+ G++ ++YT++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I+ F ++ + AL LL KM+ G EP+ +T+ S
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLS-------------------------S 160
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
L++ G + D + ++ +M Y D ++ T+I G +A L
Sbjct: 161 LLNGYCHGKRISDAVA------LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M PN+VT+ ++ G + G D A +L ++E KI+ NV ++++I +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEANVVIYSTVIDSLCKY 273
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS 567
+D A+ +F M+ + PN +T S++ N + + R + +
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDI 595
N LID++ K G L+ + +++D + + I
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSI 361
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 222/453 (49%), Gaps = 24/453 (5%)
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
KS +E DL Y + ++++ + ++ I +A HG +
Sbjct: 121 KSLQETYDLCYSTSS--------VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSY 172
Query: 225 NSIM-AVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
N+++ A + FA+ +FK M E + T+N +I GFC G+I+ A FD M+
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
+G P +VT+N LI Y +L + D L+R M GL P++ +++ +I+G ++GR
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
+L +M G + +T +H ++ L V+T SLI
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 400 DMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
K G++ A D M R + ++ T++ G+ G+ +AY + +M D+
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
P+VVT+NALI G+ +G + A+ + + +++ G + +V S++++++GF +S D+A++
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYA 575
+ R M I P+++T S++ F K+ +++ LR L + LI++Y
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 576 KSGNL-----MYSRRIFDGLPLKDIISWNIMLS 603
G+L +++ + G+ L D+++++++++
Sbjct: 532 MEGDLEKALQLHNEMVEKGV-LPDVVTYSVLIN 563
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 234/525 (44%), Gaps = 47/525 (8%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
C G + A+ + D + +G +TY L+ I+ G +L + L G + P
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG-LEP 273
Query: 121 FVETKLVSMYSKC--GHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLF 174
+ + V + C G + E V EM R T++ +I +E ++ + + +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
+M+RHG P ++ + K G++ + + +R G+C + R +++ +++
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQ 392
Query: 234 CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G M A ++ + M++ VT+NA+I G C G +E A + M+E+G+ P +V+
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
++ +++ + + D A+ + R+M G+ PD T+SS+I GF ++ RT A DL +ML
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
G+ P+ T ++H V+ ++ DV+T + LI+ +K
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 410 AAQR-IFDMMYERDVYS---WNT---------------IIGGYCHAGFCGKAYELFMKMQ 450
A+R + + YE V S ++T +I G+C G +A ++F M
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA--------------- 495
+ P+ +N +I G+ ++G +A L+K + K G + V
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
NS+I L+S + +A Q ++ N VL +L A
Sbjct: 693 ELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMA 737
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+A +N C G + DA+A+L+ + E+G ++Y +L
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL--------------------- 457
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEV 170
S + + + EA +V EM E+ + T+S++I ++ +E
Sbjct: 458 -------------SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
DL+ +M+R G PDEF ++ A GDLE +H+ + G+ + + ++
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 231 YAKCGEMGFAKKLFKSMDERDS----VTWN---------------AIITGFCQNGDIEQA 271
K AK+L + +S VT++ ++I GFC G + +A
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ F++M + +P +NI+I + + G A L ++M G T +++
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 332 FTQKGR 337
++G+
Sbjct: 685 LHKEGK 690
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 223/522 (42%), Gaps = 84/522 (16%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI-- 112
+A + NG + + + G + ++ +L+SC + + R+LH +
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 113 -GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
G GNV+ +ET +V +Y KC +S+AR+VFDE+ + +W+ ++ +E V
Sbjct: 191 YGYSGNVD--LETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
+F+ M+ P + ++ AC + LE G++IH++A++ + + V+ S+ +Y
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
KC + A+++F +D +W + ++G+ +G +AR+ FD M E + V+WN
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWN 364
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
++ Y D A+D L L+R+ + +
Sbjct: 365 AMLGGYVHAHEWDEALDF--------------------------------LTLMRQEIEN 392
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
+++T+ + HG + +V+ N+L+DMY KCG L++A
Sbjct: 393 ---IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Query: 412 QRIFDMMYE-RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP-------------- 456
F M E RD SWN ++ G G +A F MQ P
Sbjct: 450 NIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANI 509
Query: 457 --------------------NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
+VV A++ Y + D A+++FK R++
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE-----AATRDLIL 564
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
WNS+I G ++G+ + ++F ++ + P+ VT L IL A
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 207/511 (40%), Gaps = 104/511 (20%)
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
+L ++ ++C + R + S + I + N + Y KCG + A++LF+
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS---------Y 297
M ERD +WNA+IT QNG ++ + F M +GV ++ ++ S
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 298 NQL-----------------------GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
QL G+C + D R + + P +W+ ++ + +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIVRRYLE 240
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G A+ + KML V P + TV IH I VK+S+V D +
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
S+ DMY KC LE+A+R+FD +D+ SW + + GY +G +A ELF M +
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER-- 358
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKD--------------------------- 487
N+V+WNA++ GY+ + D+ALD + ++
Sbjct: 359 --NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 488 --GKIKRNVASWNSLIA----------GFLQS---------------------------G 508
G I R+ N ++A G LQS G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSN 568
+ ++A+ F MQ + P+ T+ ++L AN+ A K IH +R ++ +
Sbjct: 477 RSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 569 ILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
++D Y+K Y+ +F +D+I WN
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWN 566
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 4/271 (1%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLV 127
+A+ L + ++ + +T + +L C +++G++ H I G + N V L+
Sbjct: 378 EALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALL 437
Query: 128 SMYSKCGHLSEARKVFDEMRE-RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
MY KCG L A F +M E R+ +W+A++ +R E+ + F M P +
Sbjct: 438 DMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSK 496
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
+ L +L C L G+ IH IR G + + +++ +Y+KC +A ++FK
Sbjct: 497 YTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 247 MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
RD + WN+II G C+NG ++ + F ++ EGV+P VT+ ++ + + G ++
Sbjct: 557 AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Query: 307 VDLMRKMES-FGLTPDVYTWSSMISGFTQKG 336
M + + ++P V + MI + + G
Sbjct: 617 FQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
V S + + N I+ Y KCG ++ A+ +F+ M ERD SWN +I G + +
Sbjct: 88 VTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVF 147
Query: 444 ELFMKMQDSDSPPNVVTWNAL-------------------ITGYMQSG---AEDQALDLF 481
+F +M ++ + + Y SG E +D++
Sbjct: 148 RMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVY 207
Query: 482 K--RIEKDGK------IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
R+ D + + + SWN ++ +L+ G D+A+ +F +M + P + TV
Sbjct: 208 GKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVS 267
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
S++ A + +A + K IH A++ ++V++ VS + D Y K L +RR+FD K
Sbjct: 268 SVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 594 DIISWNIMLS 603
D+ SW +S
Sbjct: 328 DLKSWTSAMS 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 454 SP-PNVVTWNALITGYMQSGAEDQALDLFKRI-EKDGKIKRNVASWNSLIAGFLQSGQKD 511
SP P + N I Y + G D A +LF+ + E+DG SWN++I Q+G D
Sbjct: 91 SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDG------GSWNAVITACAQNGVSD 144
Query: 512 KAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILI 571
+ ++FRRM + + +L + ++ + ++++HC ++ + + ++
Sbjct: 145 EVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 572 DSYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQ 604
D Y K + +RR+FD + +SWN+++ +
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRR 237
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 210/438 (47%), Gaps = 47/438 (10%)
Query: 92 LLQSCIDR--DCIEVG--RELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE--ARKVFD 144
L+ S I + DCI + +++H + G + + ++ TKL+ +K G + AR+V +
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
++ RN F W+A+I + E ++E + ++ M + P F +L+ACG DL
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 205 GRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
GR H+ R G C + V N+++ +Y KC + A+K+F M ERD ++W +I +
Sbjct: 168 GRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ G++E A + F+++ + +V W ++ + Q + A++ +ME G+ D
Sbjct: 227 RVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEV 282
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
T + IS Q G + +A ++ SG P+
Sbjct: 283 TVAGYISACAQLGASKYADRAVQIAQKSGYSPS--------------------------- 315
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
D V+ G++LIDMYSKCG++E A +F M ++V++++++I G G +A
Sbjct: 316 ------DHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEAL 369
Query: 444 ELFMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
LF M ++ PN VT+ + SG DQ +F + + ++ + ++
Sbjct: 370 HLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 503 GFLQSGQKDKAMQIFRRM 520
++G+ +A+++ + M
Sbjct: 430 LLGRTGRLQEALELIKTM 447
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHAR-IGLVGNVNPFVE 123
G +A+A+ + ++ T+ LL++C + +GR+ HA+ L G +V
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG 187
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWE--------------- 168
++ MY KC + ARKVFDEM ER++ +W+ +I A +R + E
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 169 ----------------EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
E ++ F M + G DE + + AC + G + +A
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 213 IRHGMCSS--IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQ 270
+ G S + + ++++ +Y+KCG + A +F SM+ ++ T++++I G +G ++
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 271 ARKYFDAM-QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSM 328
A F M + ++P VT+ + + + G D + M ++FG+ P ++ M
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+ + GR AL+L++ M VEP+
Sbjct: 428 VDLLGRTGRLQEALELIKTM---SVEPH 452
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 129/316 (40%), Gaps = 56/316 (17%)
Query: 303 CDIAVDLMRKMESFGLTPDVYT--------------WSSMISGFTQKGRTYHALDLLRKM 348
C I L+R + G+ D Y W+++I G+ +G+ A+ + M
Sbjct: 81 CYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM 140
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+ P S T + H ++ V GN++IDMY KC +
Sbjct: 141 RKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESI 200
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
+ A+++FD M ERDV ++W LI Y
Sbjct: 201 DCARKVFDEMPERDV-----------------------------------ISWTELIAAY 225
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ G + A +LF+ + +++ +W +++ GF Q+ + +A++ F RM+ I +
Sbjct: 226 ARVGNMECAAELFESLPT-----KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNL--VSEISVSNILIDSYAKSGNLMYSRRI 586
VTV + A A L A K A + + + + LID Y+K GN+ + +
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 587 FDGLPLKDIISWNIML 602
F + K++ +++ M+
Sbjct: 341 FMSMNNKNVFTYSSMI 356
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEI 551
RN W ++I G+ G+ D+A+ ++ M+ +I P S T ++L A + ++
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 552 HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
H R + V N +ID Y K ++ +R++FD +P +D+ISW +++
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIA 223
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 176/336 (52%), Gaps = 8/336 (2%)
Query: 17 SIPSYSASQFEFIAST---RVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAI 73
S S S S F A+T R+ A + + + +D L LC G L +AV +
Sbjct: 39 SQTSASGSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL 98
Query: 74 LDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSK 132
L S G +V P TY LLQ C R G+ +HA++ +VG +N +++ KL+ +Y+
Sbjct: 99 LWS---SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYAL 155
Query: 133 CGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKI 192
G L A +F ++ R+L W+AMI ++ +E + ++YDM ++ +PD++ +
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
+AC LE G+ H+V I+ + S+I V+++++ +Y KC ++F + R+
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
+TW ++I+G+ +G + + K F+ M+EEG P VT+ +++ + N G D +
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYS 335
Query: 313 ME-SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
M+ +G+ P+ +++M+ + GR A + + K
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
D+ W++MISG+ QKG L + M + + P+ T H
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 232
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+ +K + +++ ++L+DMY KC R+FD + R+V +W ++I GY + G
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVS 292
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+ + F KM++ PN VT+ ++T G D+ + F +++D I+ + ++
Sbjct: 293 EVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAM 352
Query: 501 IAGFLQSGQKDKAMQI 516
+ ++G+ +A +
Sbjct: 353 VDTLGRAGRLQEAYEF 368
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+LQ C + + G+ IH+ G + + ++ +YA G++ A LF+S+ RD
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA----- 306
+ WNA+I+G+ Q G ++ + M++ + P T+ + + + L R +
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 307 -----------------VDLMRKMESFG---------LTPDVYTWSSMISGFTQKGRTYH 340
VD+ K SF T +V TW+S+ISG+ G+
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 341 ALDLLRKMLLSGVEPNSIT 359
L KM G PN +T
Sbjct: 294 VLKCFEKMKEEGCRPNPVT 312
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
L+ Y SG A LF+ + KI R++ WN++I+G++Q G + + + I+ M+
Sbjct: 149 LLILYALSGDLQTAGILFRSL----KI-RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN 203
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+I P+ T S+ A + L + K H ++R + S I V + L+D Y K +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 584 RRIFDGLPLKDIISWNIMLS 603
R+FD L +++I+W ++S
Sbjct: 264 HRVFDQLSTRNVITWTSLIS 283
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 204/459 (44%), Gaps = 42/459 (9%)
Query: 111 RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERN-LFTWSAMIGACSREKSWEE 169
R + NV F TK + + + + ARK+FD+ +R+ F ++MI A + + +
Sbjct: 3 RHAIETNVQIF--TKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 170 VVDLFYDMVRHG-FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
L+ D+ + F PD F + ++C + G +HS R G C+ + V+ ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ--------- 279
+YAK G+MG A+ F M R V+W A+I+G+ + G+++ A K FD M
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 280 -------------------EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
+E ++TW +I Y + D A L M L
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV- 239
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKM-LLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
+W++MI G+ Q + + L ++M + ++P+ +T+
Sbjct: 240 ---SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H + L V +++DMYSKCG++E A+RIFD M E+ V SWN +I GY G
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
A +LF+ M + P+ +T A+IT G ++ F + + G + + +
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMG-LNAKIEHYGC 414
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++ ++G +A + M F PN + + S L A
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPF---EPNGIILSSFLSA 450
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 184/395 (46%), Gaps = 54/395 (13%)
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD-SVTWNAIITGFCQNGDIEQA 271
+RH + +++++ + + A +G+A+KLF +RD S N++I + + +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 272 RK-YFDAMQEEGVEPGLVTWNILIASYNQLGRCDI-AVDLMRKMESFGLTPDVYTWSSMI 329
Y D +E P T+ L S + L C + L ++ FG D+Y + ++
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCS-LSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
+ + G+ A + +M P+ V
Sbjct: 121 DMYAKFGKMGCARNAFDEM------PHRSEV----------------------------- 145
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+ +LI Y +CG+L+ A ++FD M + +DV +N ++ G+ +G A LF +
Sbjct: 146 ----SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
M + V+TW +I GY D A LF D +RN+ SWN++I G+ Q+
Sbjct: 202 M----THKTVITWTTMIHGYCNIKDIDAARKLF-----DAMPERNLVSWNTMIGGYCQNK 252
Query: 509 QKDKAMQIFRRMQ-FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS 567
Q + +++F+ MQ + P+ VT+LS+LPA ++ A + HC R+ L ++ V
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
++D Y+K G + ++RIFD +P K + SWN M+
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 16/459 (3%)
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMC 218
R+ + +DLF DMV+ P ++L A K + G+ + + IR+ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+ V N + + K+ K E D VT +++ GFC+ + A D M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
E G +P +V +N +I S + R + A D +++E G+ P+V T++++++G R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
A LL M+ + PN IT E+ V+MS+ D++T +SL
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 399 IDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
I+ ++ A ++FD+M + DV S+NT+I G+C A +LF +M
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
N VT+N LI G+ Q+G D+A + F +++ G I ++ ++N L+ G +G+ +KA+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKAL 420
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
IF MQ ++ + VT +++ ++ + C + L +I ++
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 575 AKSGNL-----MYSRRIFDGLPLKD--IISWNIMLSQEI 606
G L +Y++ +GL D + +I LS E+
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 15/314 (4%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDR---DCIEVGRELHARIG 113
+N C +SDAV+++D + E G K + Y ++ S C + D + +E+ R G
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKG 220
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEE 169
+ NV + T LV+ S+A ++ +M ++ N+ T+SA++ A + E
Sbjct: 221 IRPNVVTY--TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
+LF +MVR PD ++ ++ + + + G + + N+++
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 230 VYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+ K + KLF+ M +R ++VT+N +I GF Q GD+++A+++F M G+ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+ T+NIL+ G + A+ + M+ + D+ T++++I G + G+ A L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 346 RKMLLSGVEPNSIT 359
+ L G++P+ +T
Sbjct: 459 CSLSLKGLKPDIVT 472
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 145/315 (46%), Gaps = 9/315 (2%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIG 113
+A ++ LC ++DA + +G + +TY L+ C + R L I
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEE 169
N + L+ + K G + EA+++F+EM + ++ T+S++I +E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
+F MV G L D ++ K +E G + + G+ S+ N+++
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 230 VYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+ + G++ A++ F MD D T+N ++ G C NG++E+A F+ MQ+ ++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+VT+ +I + G+ + A L + GL PD+ T+++M+SG KG + L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 346 RKMLLSGVEPNSITV 360
KM G+ N T+
Sbjct: 494 TKMKQEGLMKNDCTL 508
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 224/495 (45%), Gaps = 74/495 (14%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
++F+W+++I +R E + F M + P P ++AC D+ +G+ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
A G S I V+++++ +Y+ CG++ A+K+F + +R+ V+W ++I G+ NG+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 270 QARKYF-----------DAM------------------------------QEEGVEPGLV 288
A F DAM + G + G+
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
N L+ +Y + G +AV RK+ + D +++S++S + Q G + A ++ R++
Sbjct: 220 VGNTLLDAYAKGGEGGVAV--ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 349 LLSGVEP-NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
+ + V N+IT+ IH ++M L DDV+ G S+IDMY KCG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
+E A++ FD M ++V SW +I GY G KA ELF M DS PN +T+ +++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI-----AGFLQSGQKDKAMQIFRRMQF 522
+G + F ++ ++ + + ++ AGFLQ KA + +RM
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ-----KAYDLIQRM-- 450
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL-VSEISVSNILIDSYAKSGNLM 581
++ P+S+ S+L A C + +N+ ++EISV+ + + G M
Sbjct: 451 -KMKPDSIIWSSLLAA---------------CRIHKNVELAEISVARLFELDSSNCGYYM 494
Query: 582 YSRRIF-DGLPLKDI 595
I+ D KD+
Sbjct: 495 LLSHIYADAGRWKDV 509
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 45/325 (13%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
DV++W+S+I+ + G + AL M + P + + H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
D+ ++LI MYS CG LE A+++FD + +R++ SW ++I GY G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 441 KAYELFMKM-----QDSDS------------------PPNVVT----------------- 460
A LF + D D+ P +T
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 461 -WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
N L+ Y + G A+ R D + ++ S+NS+++ + QSG ++A ++FRR
Sbjct: 220 VGNTLLDAYAKGGEGGVAV---ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 520 MQFFQIAP-NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
+ ++ N++T+ ++L A ++ A + K IH +R L ++ V +ID Y K G
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 579 NLMYSRRIFDGLPLKDIISWNIMLS 603
+ +R+ FD + K++ SW M++
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIA 361
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
K +V SWNS+IA +SG +A+ F M+ + P + + A ++L K+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
H A S+I VS+ LI Y+ G L +R++FD +P ++I+SW M+
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 236/543 (43%), Gaps = 51/543 (9%)
Query: 41 VSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID-R 99
++MS+ P + L L + +A+ L QG T +L+S R
Sbjct: 1 MNMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLR 60
Query: 100 DCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI 158
IE G ++H G + +V L+ MY+ G + KVFDEM +R++ +W+ +I
Sbjct: 61 KVIE-GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLP-DEFLLPKILQACGKCGDLETGRLIHSVAIRHGM 217
+ +E+ + +F M + L DE + L AC +LE G I+ +
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-F 178
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
S+R+ N A++ FC+ G +++AR FD+
Sbjct: 179 EMSVRIGN-------------------------------ALVDMFCKCGCLDKARAVFDS 207
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
M+++ V+ W ++ Y GR D A L + DV W++M++G+ Q R
Sbjct: 208 MRDKNVK----CWTSMVFGYVSTGRIDEARVLFERSP----VKDVVLWTAMMNGYVQFNR 259
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
AL+L R M +G+ P++ + IHG + + D + G +
Sbjct: 260 FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA 319
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
L+DMY+KCG +E A +F + ERD SW ++I G G G+A +L+ +M++ +
Sbjct: 320 LVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLD 379
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+T+ A++T G + +F + + ++ + LI ++G D+A ++
Sbjct: 380 AITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Query: 518 RRMQFFQ---IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
+M+ + P ++LS + N+ ++V E L + VS+ S +L Y
Sbjct: 440 DKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE----KLEKVEVSDSSAHTLLASVY 495
Query: 575 AKS 577
A +
Sbjct: 496 ASA 498
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 181/456 (39%), Gaps = 116/456 (25%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
+L ++ M+ + + KS+ +V+ LF ++ G PD F LP +L++ G+ + G +H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
A++ G+ E DS N+++ + G IE
Sbjct: 70 GYAVKAGL-------------------------------EFDSYVSNSLMGMYASLGKIE 98
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
K FD M + DV +W+ +I
Sbjct: 99 ITHKVFDEMPQR---------------------------------------DVVSWNGLI 119
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
S + GR A+ + ++M E N L
Sbjct: 120 SSYVGNGRFEDAIGVFKRM---SQESN-------------------------------LK 145
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMM---YERDVYSWNTIIGGYCHAGFCGKAYELF 446
D T S + S +LE +RI+ + +E V N ++ +C G KA +F
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
M+D NV W +++ GY+ +G D+A LF+R ++V W +++ G++Q
Sbjct: 206 DSMRD----KNVKCWTSMVFGYVSTGRIDEARVLFER-----SPVKDVVLWTAMMNGYVQ 256
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISV 566
+ D+A+++FR MQ I P++ ++S+L A A ++ K IH + + V
Sbjct: 257 FNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV 316
Query: 567 SNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
L+D YAK G + + +F + +D SW ++
Sbjct: 317 GTALVDMYAKCGCIETALEVFYEIKERDTASWTSLI 352
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 80 QGSKVRPITYM--NLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHL 136
Q + +RP ++ +LL C +E G+ +H I V+ V T LV MY+KCG +
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC 196
A +VF E++ER+ +W+++I + +DL+Y+M G D +L AC
Sbjct: 331 ETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC 390
Query: 197 GKCGDLETGRLI-HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM----DERD 251
G + GR I HS+ RH + + ++ + + G + A++L M DE
Sbjct: 391 NHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETL 450
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-YNQLGRCDIAVDLM 310
+ ++++ G+++ A + + + E VE + + L+AS Y R + ++
Sbjct: 451 VPVYCSLLSAARNYGNVKIAERVAEKL--EKVEVSDSSAHTLLASVYASANRWEDVTNVR 508
Query: 311 RKMESFGL 318
RKM+ G+
Sbjct: 509 RKMKDLGI 516
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
+N ++ K + +F ++ + P++ T+ +L + L + +++H A+
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQEI 606
+ L + VSN L+ YA G + + ++FD +P +D++SWN ++S +
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 211/449 (46%), Gaps = 41/449 (9%)
Query: 77 LAEQGSKVRPITYM-NLLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSK 132
L + S + P Y+ LQ I+ + G+++HA I G ++N + KL+ ++ K
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLN--ISIKLLILHLK 81
Query: 133 CGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKI 192
CG LS AR+VFDE+ + L ++ MI + +E++ L M G D + L +
Sbjct: 82 CGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMV 141
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
L+A G ++ + +C + ++ K E D
Sbjct: 142 LKASNSRGS--------TMILPRSLCRLVHA------------------RIIKCDVELDD 175
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
V A++ + ++G +E AR F+ M++E V V +I+ Y G + A ++
Sbjct: 176 VLITALVDTYVKSGKLESARTVFETMKDENV----VCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTY-HALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
+ D+ +++M+ GF++ G T ++D+ M +G PN T
Sbjct: 232 TK----VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIG 431
++H +K + + G+SL+DMY+KCG + A+R+FD M E++V+SW ++I
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
GY G +A ELF +M++ PN VT+ ++ SG D+ ++F+ +++D +K
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ + ++ ++G +KA + R M
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 171/402 (42%), Gaps = 108/402 (26%)
Query: 203 ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
+ G+ IH+ I+ G + ++ ++ ++ KCG + +A+++F
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVF------------------ 92
Query: 263 CQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDV 322
+E +P L +N +I+ Y + G + L+++M G D
Sbjct: 93 -----------------DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADG 135
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
YT S ++ +G T M+L P S+ +H
Sbjct: 136 YTLSMVLKASNSRGST---------MIL----PRSLCRL-----------------VHAR 165
Query: 383 GVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+K + +DDVL +L+D Y K G LE+A+ +F+ M +
Sbjct: 166 IIKCDVELDDVLI-TALVDTYVKSGKLESARTVFETMKDE-------------------- 204
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
NVV ++I+GYM G + A ++F K+K ++ +N+++
Sbjct: 205 ---------------NVVCCTSMISGYMNQGFVEDAEEIFNTT----KVK-DIVVYNAMV 244
Query: 502 AGFLQSGQKDK-AMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
GF +SG+ K ++ ++ MQ PN T S++ A + L + + +++H ++ +
Sbjct: 245 EGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGV 304
Query: 561 VSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ I + + L+D YAK G + +RR+FD + K++ SW M+
Sbjct: 305 YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 202/424 (47%), Gaps = 52/424 (12%)
Query: 133 CGHLSEARKVFDEMRE-------RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
C E K FD + E N+ ++ +I C ++ E+ DLF++M + G + +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
E ++ K G + G ++ G+ ++ N +M K G A ++F
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 246 SMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
M ER + VT+N +I G C+ + +A K D M+ +G+ P L+T+N LI + +G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
+ A+ L R ++S GL+P + T++ ++SGF +KG T A ++++M G++P+ +T
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE- 420
LID +++ ++E A ++ M E
Sbjct: 413 I-----------------------------------LIDTFARSDNMEKAIQLRLSMEEL 437
Query: 421 ---RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA 477
DV++++ +I G+C G +A LF M + + PN V +N +I GY + G+ +A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
L L K +E + ++ NVAS+ +I + + +A ++ +M I P S ++LS++
Sbjct: 498 LKLLKEME-EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP-STSILSLIS 555
Query: 538 AFAN 541
N
Sbjct: 556 RAKN 559
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 40/348 (11%)
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
D ++ +I G C+ G+IE++ + E G P +V + LI + G + A DL
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 311 RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
+M GL + T++ +I+G + G ++ KM GV PN
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN-------------- 267
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSW 426
+ T N +++ K G + A ++FD M ER ++ ++
Sbjct: 268 ---------------------LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
NT+IGG C +A ++ +M+ PN++T+N LI G+ G +AL L + ++
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 487 DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
G + ++ ++N L++GF + G A ++ + M+ I P+ VT ++ FA +
Sbjct: 367 RG-LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKD 594
K ++ LV ++ ++LI + G + + R+F + K+
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 150/309 (48%), Gaps = 15/309 (4%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NP 120
C G + + +L L E G + Y L+ C + IE ++L +G +G V N
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYD 176
T L++ K G + +++++M+E NL+T++ ++ ++ ++ +F +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDL---ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
M G + ++ G C ++ E +++ + G+ ++ N+++ +
Sbjct: 294 MRERGVSCNIVTYNTLIG--GLCREMKLNEANKVVDQMK-SDGINPNLITYNTLIDGFCG 350
Query: 234 CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G++G A L + + R VT+N +++GFC+ GD A K M+E G++P VT
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+ ILI ++ + + A+ L ME GL PDV+T+S +I GF KG+ A L + M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 350 LSGVEPNSI 358
EPN +
Sbjct: 471 EKNCEPNEV 479
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+NQLC +G DA + D + E+G +TY L+ + RE+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG--------LCREM--------- 317
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMI-GACSREKSWEEVVD 172
L+EA KV D+M+ NL T++ +I G C K + +
Sbjct: 318 -----------------KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK-LGKALS 359
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
L D+ G P ++ + GD + G+ S ++ +A
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 233 KCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ M A +L SM+E D T++ +I GFC G + +A + F +M E+ EP V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+N +I Y + G A+ L+++ME L P+V ++ MI ++ ++ A L+ KM
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 349 LLSGVEPNS 357
+ SG++P++
Sbjct: 540 IDSGIDPST 548
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 207/464 (44%), Gaps = 35/464 (7%)
Query: 92 LLQSCIDRDCIEVGRELHARI--GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER 149
LL++ I + +GR +HARI L PF+ L++MYSK H AR V R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
N+ +W+++I ++ + + F++M R G +P++F P +A TG+ IH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
++A++ G + V S +Y K A+KLF + ER+ TWNA I+ +G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIAS-----YNQLGR-----------------CDIAV 307
+A + F + P +T+ + + + LG C+ +
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 308 DLMRKMESFGLTPDVYT---------WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
D K + + ++T W S+++ + Q A L + VE +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
+ IH VK + + G++L+DMY KCG +E +++ FD M
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 419 YERDVYSWNTIIGGYCHAGFCGKAYELFMKM--QDSDSPPNVVTWNALITGYMQSGAEDQ 476
E+++ + N++IGGY H G A LF +M + PN +T+ +L++ ++GA +
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ +F + I+ ++ ++ ++G ++A + ++M
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 155/344 (45%), Gaps = 38/344 (11%)
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKM 348
N LI Y++L + A ++R LTP +V +W+S+ISG Q G AL +M
Sbjct: 46 NYLINMYSKLDHPESARLVLR------LTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
GV PN T +IH + VK + DV G S DMY K
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG- 467
+ A+++FD + ER++ +WN I G +A E F++ + D PN +T+ A +
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 468 ----YMQSGAEDQALDLFKRIEKD-----------GKIK--------------RNVASWN 498
++ G + L L + D GK K +N SW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
SL+A ++Q+ + +KA ++ R + + + + S+L A A + + + IH A++
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ I V + L+D Y K G + S + FD +P K++++ N ++
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 131/266 (49%), Gaps = 4/266 (1%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDE 145
IT+ L +C D + +G +LH + G + + V L+ Y KC + + +F E
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 269
Query: 146 MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
M +N +W +++ A + E+ L+ + +F++ +L AC LE G
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
R IH+ A++ + +I V ++++ +Y KCG + +++ F M E++ VT N++I G+
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 266 GDIEQARKYFDAMQEEGV--EPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDV 322
G ++ A F+ M G P +T+ L+++ ++ G + + + M S +G+ P
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKM 348
+S ++ + G A + ++KM
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKM 475
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 181/474 (38%), Gaps = 83/474 (17%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
++ L NG S A+ + +G T+ ++ G+++HA G
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 118 V-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
+ + FV MY K +ARK+FDE+ ERNL TW+A I + E ++ F +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
R P+ L AC L G +H + +R G + + V N ++ Y KC +
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE------------ 284
+ ++ +F M +++V+W +++ + QN + E+A + +++ VE
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 285 ----PGL--------------VTWNILIAS--YNQLGRCDIAVDLMRKMESFGLTPD--V 322
GL V I + S + G+C D ++F P+ +
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIED---SEQAFDEMPEKNL 376
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
T +S+I G+ +G+ AL L +M G P
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP------------------------- 411
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-----YERDVYSWNTIIGGYCHAG 437
+ +T SL+ S+ G +E +IFD M E ++ I+ AG
Sbjct: 412 --------NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQAL----DLFKRIEKD 487
+AYE KM P + W AL G L +LFK KD
Sbjct: 464 MVERAYEFIKKMPIQ---PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKD 514
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
DSPP N LI Y + + A L R+ RNV SW SLI+G Q+G
Sbjct: 37 DSPPPPFLANYLINMYSKLDHPESA-RLVLRLTP----ARNVVSWTSLISGLAQNGHFST 91
Query: 513 AMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
A+ F M+ + PN T A A+L K+IH A++ + ++ V D
Sbjct: 92 ALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQEI 606
Y K+ +R++FD +P +++ +WN +S +
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 212/469 (45%), Gaps = 52/469 (11%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLVSM---YSKCGHLSEARKVFDE 145
M+ LQ C ++ + +++HAR+ G + + + TK +S + L A+ VFD
Sbjct: 18 MSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 146 MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
+ F W+ MI S E + L+ M+ + + P +L+AC E
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
IH A+ ++G+ E D N++I +
Sbjct: 135 TQIH----------------------AQITKLGY---------ENDVYAVNSLINSYAVT 163
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G+ + A FD + E P V+WN +I Y + G+ DIA+ L RKM + +W
Sbjct: 164 GNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLFRKMAE----KNAISW 215
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MISG+ Q AL L +M S VEP+++++ IH K
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
+ D + G LIDMY+KCG++E A +F + ++ V +W +I GY + G +A
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
FM+MQ PNV+T+ A++T +G ++ +F +E+D +K + + ++
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKEI 551
++G D+A + + M + PN+V ++L A N+ G+++ EI
Sbjct: 396 RAGLLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PD + W+ MI GF+ +L L ++ML S N+ T +I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H +I + YE DVY+ N++I Y G
Sbjct: 138 HA-------------------------------QITKLGYENDVYAVNSLINSYAVTGNF 166
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
A+ LF D P+ V+WN++I GY+++G D AL LF+++ + +N SW +
Sbjct: 167 KLAHLLF----DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE-----KNAISWTT 217
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
+I+G++Q+ +A+Q+F MQ + P++V++ + L A A L A ++ K IH +
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ + + +LID YAK G + + +F + K + +W ++S
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 192/493 (38%), Gaps = 118/493 (23%)
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
E NL+ + + CS++ EE+ + M++ G + D + + K L C
Sbjct: 11 EHNLYETMSCLQRCSKQ---EELKQIHARMLKTGLMQDSYAITKFLSFC----------- 56
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGD 267
I +S YA+ +F D D+ WN +I GF + +
Sbjct: 57 -------------ISSTSSDFLPYAQI--------VFDGFDRPDTFLWNLMIRGFSCSDE 95
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
E++ + M T+ L+ + + L + + ++ G DVY +S
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNS 155
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I+ + G A L ++ EP
Sbjct: 156 LINSYAVTGNFKLAHLLFDRI----PEP-------------------------------- 179
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
DDV + NS+I Y K G ++ A +F M E++ SW T+I GY A +A +LF
Sbjct: 180 --DDV-SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 448 KMQDSD-SPPNVVTWNAL----------------------------------ITGYMQSG 472
+MQ+SD P NV NAL I Y + G
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
++AL++FK I+K ++V +W +LI+G+ G +A+ F MQ I PN +T
Sbjct: 297 EMEEALEVFKNIKK-----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 533 LSILPA--FANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
++L A + LV K+ + NL I ++D ++G L ++R +
Sbjct: 352 TAVLTACSYTGLVEEGKLI-FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 591 PLK-DIISWNIML 602
PLK + + W +L
Sbjct: 411 PLKPNAVIWGALL 423
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 44/308 (14%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVG------NVNPFVET----------------- 124
T+ +LL++C + E ++HA+I +G VN + +
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 125 ---------KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
++ Y K G + A +F +M E+N +W+ MI + +E + LF+
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV----Y 231
+M PD L L AC + G LE G+ IHS + + IR+++ + V Y
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK----TRIRMDSVLGCVLIDMY 292
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
AKCGEM A ++FK++ ++ W A+I+G+ +G +A F MQ+ G++P ++T+
Sbjct: 293 AKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFT 352
Query: 292 ILIASYNQLGRCDIAVDLMRKME-SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
++ + + G + + ME + L P + + ++ + G A +++M L
Sbjct: 353 AVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 412
Query: 351 SGVEPNSI 358
+PN++
Sbjct: 413 ---KPNAV 417
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 272/599 (45%), Gaps = 86/599 (14%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI---GL 114
L L +G + AV++ S + + Y L Q+C ++ + G LH +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQ--AYAALFQACAEQRNLLDGINLHHHMLSHPY 90
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
+ N + L++MY+KCG++ AR+VFD M ERN+ +W+A+I + + +E LF
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M+ H F P+EF L +L +C E G+ +H +A++ G+ SI V N+++++Y +C
Sbjct: 151 SSMLSHCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 235 GEMGFAKK---LFKSMDERDSVTWNAIITGF--CQNGDIEQARKYFDAMQEEGVEPGLVT 289
+ A + +F+++ ++ VTWN++I F C G ++A F M +GV T
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLG--KKAIGVFMRMHSDGVGFDRAT 263
Query: 290 -WNILIASY-------NQLGRC-----------------DIAVDLMR----KMESF---- 316
NI + Y N++ +C ++A L++ +E +
Sbjct: 264 LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCY 323
Query: 317 ------GLTPDVYTWSSMISGFT--QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
D+ W+ +I+ F R H LR+ LS P+ T
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLS---PDWYTFSSVLKACA 380
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
IH +K + D + NSLI Y+KCG L+ R+FD M RDV SWN+
Sbjct: 381 GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNS 440
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
++ Y G +F KM D P+ T+ AL++ +G ++ L +F+ + +
Sbjct: 441 MLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKP 497
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAG 545
+ + + +I ++ + +A ++ ++M + P++V +++L + N G
Sbjct: 498 ETLPQLNHYACVIDMLSRAERFAEAEEVIKQM---PMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 546 K----KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNI 600
K K+KE+ N +S I +SNI Y G+ + L +K++ +W +
Sbjct: 555 KLAADKLKEL---VEPTNSMSYIQMSNI----YNAEGSFNEA-----NLSIKEMETWRV 601
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 165/365 (45%), Gaps = 56/365 (15%)
Query: 284 EPGLVTWNILIASY--NQLGRCDIAVDLMRKMESFGLTPD--VYTWSSMISGFTQKGRTY 339
P + N+++A++ N +C +++ + F P+ V +W+++I+G+ Q G
Sbjct: 88 HPYCYSQNVILANFLINMYAKCG---NILYARQVFDTMPERNVVSWTALITGYVQAGNEQ 144
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
L ML S PN T+ ++HG+ +K+ L + N++I
Sbjct: 145 EGFCLFSSML-SHCFPNEFTLSSVLTSCRYEPGK----QVHGLALKLGLHCSIYVANAVI 199
Query: 400 DMYSKCGDLEAAQR---IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM------- 449
MY +C D AA +F+ + +++ +WN++I + KA +FM+M
Sbjct: 200 SMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259
Query: 450 -------------QDSDSPPN-----------------VVTWNALITGYMQSGAE--DQA 477
+ SD PN +VT + T ++ +E +
Sbjct: 260 DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDY 319
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
D +K + R++ +WN +I F ++A+ +F +++ +++P+ T S+L
Sbjct: 320 TDCYKLFMEMSHC-RDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A A LV + IH ++ +++ ++N LI +YAK G+L R+FD + +D++S
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 598 WNIML 602
WN ML
Sbjct: 438 WNSML 442
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
NV+ N LI Y + G L+ R D +RNV SW +LI G++Q+G + + +
Sbjct: 95 NVILANFLINMYAKCGN-----ILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCL 149
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
F M PN T+ S+L + + K++H AL+ L I V+N +I Y +
Sbjct: 150 FSSM-LSHCFPNEFTLSSVLTS----CRYEPGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 577 --SGNLMYSR-RIFDGLPLKDIISWNIMLS 603
G Y +F+ + K++++WN M++
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 222/493 (45%), Gaps = 51/493 (10%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+ + LN C +SDAVA++D + E G + IT+ L+ + L R+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 114 LVGNVNPFVETKLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G P + T V + C G A + ++M E ++ ++ +I + + +
Sbjct: 218 QRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G P+ ++ G + S I + ++ N++
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G+ A+KL+ M +R D T+N+++ GFC + +++A++ F+ M +
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + R + +L R+M GL D T++++I G G +A
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV P D++T + L+D
Sbjct: 457 VFKQMVSDGVPP-----------------------------------DIMTYSILLDGLC 481
Query: 404 KCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
G LE A +FD M + D+Y + T+I G C AG ++LF + PNVV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+N +I+G +A L K++++DG + N ++N+LI L+ G K + ++ R
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLP-NSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 520 MQFFQIAPNSVTV 532
M+ + ++ T+
Sbjct: 601 MRSCRFVGDASTI 613
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 211/470 (44%), Gaps = 58/470 (12%)
Query: 151 LFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHS 210
L+T++ +I R + L M++ G+ P L +L G C R+ +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN--GYC---HGKRISDA 174
Query: 211 VAIRHGMCS------SIRVNNSIMAVYA--KCGE-MGFAKKLFKSMDERDSVTWNAIITG 261
VA+ M +I I ++ K E + ++ + + + VT+ ++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
C+ GD + A + M+ +E +V +N +I S + D A++L ++ME+ G+ P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V T+SS+IS GR A LL M+ + PN +T
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF--------------------- 333
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAG 437
N+LID + K G A++++D M +R D++++N+++ G+C
Sbjct: 334 --------------NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
KA ++F M D P+VVT+N LI G+ +S + +LF+ + G + V ++
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TY 438
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
+LI G G D A ++F++M + P+ +T +L N +K E+ +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
+ +I + +I+ K+G + +F L LK +++++N M+S
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 167/356 (46%), Gaps = 9/356 (2%)
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME 314
+ I+ + ++ A F M + P +V +N L+++ ++ + D+ + L KM+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
+ +YT++ +I+ F ++ + AL LL KM+ G EP+ +T+
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTII 430
+ V+M D +T +LI A + D M +R ++ ++ ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
G C G A L KM+ + +VV +N +I + D AL+LFK +E G I
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-I 291
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+ NV +++SLI+ G+ A Q+ M +I PN VT +++ AF + ++
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
++ ++R++ +I N L++ + L ++++F+ + K D++++N ++
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 13/345 (3%)
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
V +N +++ + + + MQ + GL T+NILI + + + +A+ L+ K
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M G P + T SS+++G+ R A+ L+ +M+ G P++IT
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNT 428
+ V+ +++T +++ K GD + A + + M E DV +NT
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA-EDQALDLFKRIEKD 487
II C A LF +M+ PNVVT+++LI+ G D + L IEK
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK- 324
Query: 488 GKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKK 547
KI N+ ++N+LI F++ G+ +A +++ M I P+ T S++ F K
Sbjct: 325 -KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 548 VKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
K++ + ++ ++ N LI + K S+R+ DG L
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCK------SKRVEDGTEL 422
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 224/492 (45%), Gaps = 44/492 (8%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
+KL+S +K + ++M+ N +T+S +I R + + M++
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G+ P+ L +L +G C S R++ ++ V
Sbjct: 145 LGYEPNIVTLSSLL---------------------NGYCHSKRISEAVALV--------- 174
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
++F + + ++VT+N +I G + +A D M +G +P LVT+ +++ +
Sbjct: 175 -DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G D+A +L+ KME L P V ++++I G + AL+L ++M G+ PN +T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
+ ++ + DV T ++LID + K G L A++++D M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 420 ER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+R + +++++I G+C +A ++F M P+VVT+N LI G+ + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
+ +++F+ + + G + N ++N LI G Q+G D A +IF+ M + PN +T ++
Sbjct: 414 EGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 536 LPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-- 593
L +K + R + I NI+I+ K+G + +F L LK
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 594 --DIISWNIMLS 603
D++++N M+S
Sbjct: 533 KPDVVAYNTMIS 544
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 228/493 (46%), Gaps = 51/493 (10%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+ + LN C + +S+AVA++D + G + +T+ L+ + L R+
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 114 LVGNVNPFVETKLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G P + T V + C G A + ++M E + ++ +I + K
Sbjct: 214 AKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G P+ ++ G + S I + + +++
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDS----VTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G++ A+KL+ M +R VT++++I GFC + +++A++ F+ M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + R + +++ R+M GL + T++ +I G Q G A +
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV PN ++T N+L+D
Sbjct: 453 IFKEMVSDGVPPN-----------------------------------IMTYNTLLDGLC 477
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K G LE A +F+ + E +Y++N +I G C AG ++LF + P+VV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
+N +I+G+ + G++++A LFK +++DG + N +N+LI L+ G ++ + ++ +
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKE 596
Query: 520 MQFFQIAPNSVTV 532
M+ A ++ T+
Sbjct: 597 MRSCGFAGDASTI 609
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 206/460 (44%), Gaps = 52/460 (11%)
Query: 68 SDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP--FVETK 125
S+A+A++D + +G + +TY ++ R ++ L ++ G + P +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNT 261
Query: 126 LVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
++ K H+ +A +F EM + N+ T+S++I W + L DM+
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
PD F ++ A K G L ++ ++ + SI +S++ + + AK
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 242 KLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
++F+ M + D VT+N +I GFC+ +E+ + F M + G+ VT+NILI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
Q G CD+A ++ ++M S G+ P++ T+++++ G + G+ A+ + + S +EP
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT- 500
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
+ T N +I+ K G +E +F
Sbjct: 501 ----------------------------------IYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 418 M----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
+ + DV ++NT+I G+C G +A LF +M++ + PN +N LI ++ G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
+ + +L K + G AS L+ L G+ DK+
Sbjct: 587 REASAELIKEMRSCGFAGD--ASTIGLVTNMLHDGRLDKS 624
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 160/354 (45%), Gaps = 45/354 (12%)
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
S D R+ ++ N + ++ A F M + P ++ ++ L+++ ++ + D+
Sbjct: 45 SYDYREKLSRNGL-----SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 99
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
+ L +M++ G+ + YT+S +I+ F ++ + AL +L KM+ G EPN +T+
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL----- 154
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YER 421
+SL++ Y + A + D M Y+
Sbjct: 155 ------------------------------SSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
+ ++NT+I G +A L +M P++VT+ ++ G + G D A +L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
++E+ GK++ V +N++I G + D A+ +F+ M+ I PN VT S++ N
Sbjct: 245 NKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
+ + R + ++ + LID++ K G L+ + +++D + + I
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 190/417 (45%), Gaps = 37/417 (8%)
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL--FYDMVRHGFLPDEFLLPKILQAC 196
AR++ +++ ++ W ++IG S + + + M R+G +P P +L+A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
K D + H+ ++ G+ S V NS+++ Y+ G FA +LF +++D VTW
Sbjct: 115 FKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGV-------------------------------EP 285
A+I GF +NG +A YF M++ GV E
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 286 GLVTWNILIAS--YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
G V ++ I S + G+C D + + + +V TW+++I+G+ Q +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQSRCFDKGML 292
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ +ML S V PN T+ +H +K S+ + G +LID+Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 404 KCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
KCG LE A +F+ ++E++VY+W +I G+ G+ A++LF M S PN VT+ A
Sbjct: 353 KCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMA 412
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+++ G ++ LF ++ ++ + ++ F + G ++A + RM
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 151/306 (49%), Gaps = 6/306 (1%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ NG S+A+ + + G +T +++L++ + + GR +H
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 116 GNV--NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
G V + F+ + LV MY KC +A+KVFDEM RN+ TW+A+I + + +++ + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F +M++ P+E L +L AC G L GR +H I++ + + +++ +Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
CG + A +F+ + E++ TW A+I GF +G A F M V P VT+ +
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 294 IASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
+++ G + L M+ F + P ++ M+ F +KG A L+ +M +
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPM-- 471
Query: 353 VEPNSI 358
EP ++
Sbjct: 472 -EPTNV 476
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 183/432 (42%), Gaps = 48/432 (11%)
Query: 107 ELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
+ HA I G + +PFV L+S YS G A ++FD ++++ TW+AMI R
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVN 224
S E + F +M + G +E + +L+A GK D+ GR +H + + G + +
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+S++ +Y KC A+K+F M R+ VTW A+I G+ Q+ ++ F+ M + V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 285 PGLVTWNILIASYNQLG--------RCDIAVDLMRKMESFGLT----------------- 319
P T + ++++ +G C + + + + G T
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 320 ------PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
+VYTW++MI+GF G A DL ML S V PN +T
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 374 XXXXEIH-GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGG 432
+ + + ++ ++D++ + G LE A+ + + M + N + G
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM---PMEPTNVVWGA 480
Query: 433 YCHAGFCGKAYEL-------FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+ K YEL +K+Q P + + L Y +S D+ + K+++
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQ----PSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 486 KDGKIKRNVASW 497
+K SW
Sbjct: 537 DQQVVKSPGFSW 548
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 52/352 (14%)
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G++ N LI+ Y+ G D A L E DV TW++MI GF + G A
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED----KDVVTWTAMIDGFVRNGSASEA 188
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLID 400
+ +M +GV N +TV +HG+ ++ V DV G+SL+D
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
MY KC + AQ++FD M R+V +W +I GY + K +F +M SD PN T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 461 WNALITG-----------------------------------YMQSGAEDQALDLFKRIE 485
+++++ Y++ G ++A+ +F+R+
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+ +NV +W ++I GF G A +F M ++PN VT +++L A A+ G
Sbjct: 369 E-----KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH---G 420
Query: 546 KKVKEIHCCAL----RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
V+E L R N+ + ++D + + G L ++ + + +P++
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPME 472
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 134/323 (41%), Gaps = 44/323 (13%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLL--RKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
T + W S+I F+ L L R M +GV P+ T
Sbjct: 64 TLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF 123
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
+ H VK L D NSLI YS G + A R+FD ++DV +W +I G+
Sbjct: 124 -QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 437 GFCGKAYELFMKMQDSDSPPNVVT------------------------------------ 460
G +A F++M+ + N +T
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
++L+ Y + D A +F D RNV +W +LIAG++QS DK M +F M
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVF-----DEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+APN T+ S+L A A++ A + + +HC ++ ++ + LID Y K G L
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 581 MYSRRIFDGLPLKDIISWNIMLS 603
+ +F+ L K++ +W M++
Sbjct: 358 EEAILVFERLHEKNVYTWTAMIN 380
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 227/494 (45%), Gaps = 64/494 (12%)
Query: 85 RPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCG---HLSE 138
+PI ++ L++C R +E+ +LH + ++ NV P ++L+ + C +LS
Sbjct: 7 KPI--LSQLENC--RSLVEL-NQLHGLMIKSSVIRNVIPL--SRLIDFCTTCPETMNLSY 59
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
AR VF+ + +++ W++MI S + ++ + + +M+R G+ PD F P +L+AC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
D++ G +H ++ G ++ V+ ++ +Y CGE+ + ++F+ + + + V W ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPG-LVTWNILIASYNQLGRC-DIAVD--LMRKME 314
I+GF N A + F MQ GV+ + ++L+A GRC DI ++
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC----GRCKDIVTGKWFHGFLQ 235
Query: 315 SFGLTP-----------------DVY----------------------TWSSMISGFTQK 335
G P D+Y +W+S+I+G++Q
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
G AL + ML G+ P+ +T IH K V D
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD-SDS 454
+L++MY+K GD E+A++ F+ + ++D +W +I G G +A +F +MQ+ ++
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNA 415
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
P+ +T+ ++ G ++ F + ++ V + ++ ++G+ ++A
Sbjct: 416 TPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAE 475
Query: 515 QIFRRMQFFQIAPN 528
++ + M + PN
Sbjct: 476 RLVKTM---PVKPN 486
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 201/493 (40%), Gaps = 87/493 (17%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE---MGFAKKLFKSMD 248
IL C L +H + I+ + ++ + ++ C E + +A+ +F+S+D
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN-----QLGRC 303
WN++I G+ + + ++A ++ M +G P T+ ++ + + Q G C
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 304 DIAVDLMRKME-------------------SFGLTP-------DVYTWSSMISGFTQKGR 337
+ E ++GL +V W S+ISGF R
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD------- 390
A++ R+M +GV+ N + HG +
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 391 -DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
+V+ SLIDMY+KCGDL A+ +FD M ER + SWN+II GY G +A +F+ M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI------------------- 490
D P+ VT+ ++I M G + + K G +
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 491 -----------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA-PNSVTVLSILPA 538
K++ +W +I G G ++A+ IF+RMQ A P+ +T L +L A
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Query: 539 FANL---VAGKK----VKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
+++ G++ ++++H L + ++D +++G + R+ +P
Sbjct: 429 CSHIGLVEEGQRYFAEMRDLH------GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 592 LKDIIS-WNIMLS 603
+K ++ W +L+
Sbjct: 483 VKPNVNIWGALLN 495
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFV 122
NG +A+ + + + G +T+++++++ + + C ++G+ +HA + G V + +
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG- 181
LV+MY+K G A+K F+++ +++ W+ +I + E + +F M G
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 182 FLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD +L AC G +E G R + HG+ ++ ++ + ++ G A
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 241 KKLFKSMDERDSVT-WNAIITGFCQNGDIEQARKYFDAMQEEGVEP---GLVTWNILIAS 296
++L K+M + +V W A++ G C DI + + D ++ EP G + +L
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNG-C---DIHENLELTDRIRSMVAEPEELGSGIYVLLSNI 530
Query: 297 YNQLGR 302
Y + GR
Sbjct: 531 YAKAGR 536
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 213/456 (46%), Gaps = 53/456 (11%)
Query: 92 LLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDE--M 146
LL+ C R + G+ELHA + GL ++ L Y+ G + A+K+FDE +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
E++ W+ ++ + SR + LF +M R D+ + + C K DL +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
H VA++ G+ +S++V N++M +Y KCG + K++F+ ++E+ V+W ++ +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME-SFGLTPDVYTW 325
+E+ R+ F M E V W +++A Y G ++L+ +M G + T
Sbjct: 192 GLERGREVFHEMPERNA----VAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 326 SSMISGFTQK-----GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
SM+S Q GR H L ++M++ G E +
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMM-GEEAS------------------------ 282
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
DDV+ G +L+DMY+KCG+++++ +F +M +R+V +WN + G G
Sbjct: 283 --------YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGR 334
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
++F +M + P+ +T+ A+++ SG D+ F + G ++ V + +
Sbjct: 335 MVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG-LEPKVDHYACM 392
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
+ ++G ++A + R M + PN V + S+L
Sbjct: 393 VDLLGRAGLIEEAEILMREM---PVPPNEVVLGSLL 425
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 54/294 (18%)
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
D W++++S F++ G +++ L +M VE + ++V + H
Sbjct: 75 DNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGH 134
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
G+ VKM ++ V N+L+DMY KCG + +RIF+ + E+ V SW ++
Sbjct: 135 GVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL---------- 184
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
VV W L ++ ++F + + RN +W +
Sbjct: 185 ---------------DTVVKWEGL----------ERGREVFHEMPE-----RNAVAWTVM 214
Query: 501 IAGFLQSGQKDKAMQIFRRMQF-FQIAPNSVTVLSILPAFA---NLVAGKKVKEIHCCAL 556
+AG+L +G + +++ M F N VT+ S+L A A NLV G+ V H AL
Sbjct: 215 VAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWV---HVYAL 271
Query: 557 RRNLV-------SEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ ++ ++ V L+D YAK GN+ S +F + +++++WN + S
Sbjct: 272 KKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFS 325
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 19/261 (7%)
Query: 73 ILDSLAEQ----GSKVRPITYMNLLQSCIDRDCIEVGRELHA----RIGLVGNVNPF--- 121
+L+ LAE G + +T ++L +C + VGR +H + ++G +
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 122 -VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V T LV MY+KCG++ + VF MR+RN+ TW+A+ + V+D+F M+R
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE 346
Query: 181 GFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
PD+ +L AC G ++ G R HS+ +G+ + ++ + + G +
Sbjct: 347 -VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 240 AKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-Y 297
A+ L + M + V +++ +G +E A + + + + PG + IL+++ Y
Sbjct: 405 AEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ--MSPGNTEYQILMSNMY 462
Query: 298 NQLGRCDIAVDLMRKMESFGL 318
GR DIA L + G+
Sbjct: 463 VAEGRSDIADGLRGSLRKRGI 483
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRI---EKDGKIKRNVAS 496
GK + P NAL Y SG A LF I EKD
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDN------VD 78
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
W +L++ F + G +M++F M+ ++ + V+V+ + A L ++ H A+
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ +++ + V N L+D Y K G + +RIF+ L K ++SW ++L
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 214/490 (43%), Gaps = 49/490 (10%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
++ +LC L A+ +DSL G TY L++ CI + G + +
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90
Query: 116 GNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
G+ P F+ L++MY K L++A ++FD+M +RN+ +W+ MI A S+ K ++ ++L
Sbjct: 91 GH-RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
M+R P+ + +L++C D+ R++H I+ G+ S + V ++++ V+AK
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG----------- 282
GE A +F M D++ WN+II GF QN + A + F M+ G
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 283 ---------VEPG-------------LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
+E G L+ N L+ Y + G + A+ + +M+
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKE----R 322
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
DV TWS+MISG Q G + AL L +M SG +PN IT+
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 381 GIGVKMSLVDDVLTG-NSLIDMYSKCGDLEAAQRIFDMMY-ERDVYSWNTIIGGYCHAGF 438
K+ +D V +ID+ K G L+ A ++ + M E D +W T++G C
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQR 441
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW- 497
E K + P + T+ L Y S D ++ R+ G K SW
Sbjct: 442 NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Query: 498 --NSLIAGFL 505
N I F+
Sbjct: 502 EVNKQIHAFI 511
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 181/414 (43%), Gaps = 56/414 (13%)
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
HG D ++++ C + G LI +G + + N ++ +Y K +
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN- 298
A +LF M +R+ ++W +I+ + + ++A + M + V P + T++ ++ S N
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 299 -------------------------------QLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+LG + A+ + +M +T D W+S
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNS 230
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I GF Q R+ AL+L ++M +G T+ + H VK
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
D++ N+L+DMY KCG LE A R+F+ M ERDV +W+T+I G G+ +A +LF
Sbjct: 291 --QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M+ S + PN +T ++ +G + F+ ++K I + +I ++
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
G+ D A+++ M + P++VT ++L A C ++RN+V
Sbjct: 409 GKLDDAVKLLNEM---ECEPDAVTWRTLLGA---------------CRVQRNMV 444
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
N LI+MY K L A ++FD M +R+V SW T+I Y KA EL + M +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 456 PNVVTWNALI-------------TGYMQSGAEDQA------LDLFKRIEK--------DG 488
PNV T+++++ G ++ G E +D+F ++ + D
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+ + WNS+I GF Q+ + D A+++F+RM+ T+ S+L A L +
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ H ++ + ++ ++N L+D Y K G+L + R+F+ + +D+I+W+ M+S
Sbjct: 280 MQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
P + N LI Y++ + A LF D +RNV SW ++I+ + + KA++
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLF-----DQMPQRNVISWTTMISAYSKCKIHQKALE 148
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYA 575
+ M + PN T S+L + + V+ +HC ++ L S++ V + LID +A
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 576 KSGNLMYSRRIFDGLPLKDIISWN 599
K G + +FD + D I WN
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWN 229
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 222/493 (45%), Gaps = 52/493 (10%)
Query: 126 LVSMYSKCGHLSEA----RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
+++ + +C LS A K+ E + ++ ++ E E ++L MV G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P L ++ G + ++ + G + ++ V K G+ A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 242 KLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
+L + M+ER D+V ++ II G C++G ++ A F+ M+ +G + ++T+N LI +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
GR D L+R M ++P+V T+S +I F ++G+ A LL++M+ G+ PN+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
IT NSLID + K LE A ++ D+
Sbjct: 369 ITY-----------------------------------NSLIDGFCKENRLEEAIQMVDL 393
Query: 418 MYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
M + D+ ++N +I GYC A ELF +M N VT+N L+ G+ QSG
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
+ A LF+ + +++ ++ S+ L+ G +G+ +KA++IF +++ ++ + +
Sbjct: 454 LEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
I+ N ++ C + + + NI+I + +L + +F + +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 594 ----DIISWNIML 602
D +++NI++
Sbjct: 573 GHAPDELTYNILI 585
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 209/463 (45%), Gaps = 40/463 (8%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
+++T S MI R + +++ G+ PD + +L
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL---------------- 165
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
+G+C RV+ ++ V + EMG L +T N ++ G C NG +
Sbjct: 166 -----NGLCLECRVSEALELV-DRMVEMGHKPTL---------ITLNTLVNGLCLNGKVS 210
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
A D M E G +P VT+ ++ + G+ +A++L+RKME + D +S +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
G + G +A +L +M + G + + IT ++ +K +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYEL 445
+V+T + LID + K G L A ++ M +R + ++N++I G+C +A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
M P+++T+N LI GY ++ D L+LF+ + G I N ++N+L+ GF
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFC 449
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEIS 565
QSG+ + A ++F+ M ++ P+ V+ +L + +K EI + + +I
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 566 VSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLSQ 604
+ I+I + + + +F LPLK D ++NIM+S+
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 218/480 (45%), Gaps = 19/480 (3%)
Query: 49 PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRE 107
P + LN LC +S+A+ ++D + E G K IT L+ C++ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 108 LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSR 163
+ + N ++++ K G + A ++ +M ERN+ +S +I +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+ S + +LF +M GF D ++ G + G + I+ + ++
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
+ ++ + K G++ A +L K M +R +++T+N++I GFC+ +E+A + D M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
+G +P ++T+NILI Y + R D ++L R+M G+ + T+++++ GF Q G+
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
A L ++M+ V P+ ++ EI G K + D+ G +I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI--GIYMI 513
Query: 400 DMYSKCG--DLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
++ C ++ A +F + + D ++N +I C KA LF KM +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
P+ +T+N LI ++ A +L + ++ G +V++ ++ L SG+ DK+
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTV-KMVINMLSSGELDKS 631
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 194/446 (43%), Gaps = 46/446 (10%)
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ VDLF DM++ LP ++ A K E
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL----------------------- 106
Query: 228 MAVYAKCGEM---GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
V A C +M G A ++ T + +I FC+ + A + + G E
Sbjct: 107 --VLALCKQMESKGIAHSIY---------TLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
P V +N L+ R A++L+ +M G P + T +++++G G+ A+ L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+ +M+ +G +PN +T E+ + ++ D + + +ID K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 405 CGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
G L+ A +F+ M ++ D+ ++NT+IGG+C+AG +L M PNVVT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
++ LI +++ G +A L K + + G I N ++NSLI GF + + ++A+Q+ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
P+ +T ++ + E+ R +++ N L+ + +SG L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 581 MYSRRIFDGLPLK----DIISWNIML 602
++++F + + DI+S+ I+L
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 176/378 (46%), Gaps = 15/378 (3%)
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
C E GF+ +++ RD ++ + + A F M + P ++ +N L
Sbjct: 41 CCERGFSTFSDRNLSYRDKLSSGLV------GIKADDAVDLFRDMIQSRPLPTVIDFNRL 94
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
++ + + ++ + L ++MES G+ +YT S MI+ F + + +A + K++ G
Sbjct: 95 FSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGY 154
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
EP+++ E+ V+M ++T N+L++ G + A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 414 IFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
+ D M E + ++ ++ C +G A EL KM++ + + V ++ +I G
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS 529
+ G+ D A +LF +E G K ++ ++N+LI GF +G+ D ++ R M +I+PN
Sbjct: 275 KDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 530 VTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDG 589
VT ++ +F ++ ++ ++R + N LID + K L + ++ D
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 590 LPLK----DIISWNIMLS 603
+ K DI+++NI+++
Sbjct: 394 MISKGCDPDIMTFNILIN 411
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 44/300 (14%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
++ ++ C L +A+ ++D + +G +T+ L+ + I+ G EL + L
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 115 VGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEE 169
G + N LV + + G L A+K+F EM R ++ ++ ++ E+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
+++F + + +L+ G I+ + I HGMC++ +V++
Sbjct: 492 ALEIFGKIEKSKM------------------ELDIG--IYMIII-HGMCNASKVDD---- 526
Query: 230 VYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
A LF S+ + D+ +N +I+ C+ + +A F M EEG P
Sbjct: 527 ----------AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+T+NILI ++ A +L+ +M+S G DV T +I+ + LD+L
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/538 (23%), Positives = 234/538 (43%), Gaps = 88/538 (16%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKV-RPITYMNLLQSCIDRDCIEVGR 106
+P+ +F+ + L + L +AV ++++ + S + P Y +LL +CI +
Sbjct: 92 IPWRQFVFTKPLGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACIS------AK 145
Query: 107 ELHARIGLVGNV--------NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFT---WS 155
LH I + + NP + +KL++++S C L ARK+FD++ + +L T W+
Sbjct: 146 SLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWA 205
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
AM SR S + + ++ DM+ P F + L+AC DL GR IH+
Sbjct: 206 AMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHA----- 260
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF 275
++ K ++ D V +N ++ + ++G + ARK F
Sbjct: 261 --------------------------QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVF 294
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
D M E +V TW+S+IS ++K
Sbjct: 295 DGMSER---------------------------------------NVVTWNSLISVLSKK 315
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
R + +L RKM + + T+ EIH +K DV
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
NSL+DMY KCG++E ++R+FD+M +D+ SWN ++ Y G + LF M +S
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
P+ +T+ AL++G +G + L LF+R++ + ++ + + L+ ++G+ +A++
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
+ M F A ++L+ N+ G+ + N + + VSNI D+
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYS---WNTIIGGYCHAGFCGKAYELFMKMQDS 452
+ LI ++S C L+ A++IFD + + + + W + GY G A +++ M S
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 453 DSPP-----------------------------------NVVTWNALITGYMQSGAEDQA 477
P + V +N L+ YM+SG D A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
+F DG +RNV +WNSLI+ + + + +FR+MQ I + T+ +ILP
Sbjct: 291 RKVF-----DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 345
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
A + + A KEIH L+ ++ + N L+D Y K G + YSRR+FD + KD+ S
Sbjct: 346 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 598 WNIMLS 603
WNIML+
Sbjct: 406 WNIMLN 411
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 221/530 (41%), Gaps = 78/530 (14%)
Query: 51 PKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA 110
P + ++ L G + +A + DS + + + RD ++ E+
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 111 RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEV 170
R N LVS Y K G + EARKVFD M ERN+ +W+A++ +
Sbjct: 77 R-------NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 171 VDLFYDMVRH----------GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
LF+ M GFL D +I AC + I ++ HG+C
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQD----GRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
RV+ A+++F M ER +TW ++TG+ QN ++ ARK FD M E
Sbjct: 186 GRVDE--------------AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR--- 337
+ V+W ++ Y Q GR + A +L E + P V ++MISG QKG
Sbjct: 232 KTE----VSWTSMLMGYVQNGRIEDAEELF---EVMPVKP-VIACNAMISGLGQKGEIAK 283
Query: 338 ----------------------------TYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
ALDL M GV P T+
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
++H V+ DV + L+ MY KCG+L ++ IFD +D+ WN+I
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDS-PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
I GY G +A ++F +M S S PN VT+ A ++ +G ++ L +++ +E
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+K A + ++ ++G+ ++AM++ M + P++ S+L A
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGA 510
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 191/400 (47%), Gaps = 50/400 (12%)
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
++ G++ A+KLF S D + +WN+++ G+ N ARK FD M + + ++WN
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWN 83
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPD--VYTWSSMISGFTQKGRTYHALDLLRKML 349
L++ Y + G D A RK+ F L P+ V +W++++ G+ G+ A L KM
Sbjct: 84 GLVSGYMKNGEIDEA----RKV--FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM- 136
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
E N ++ +++ +M D + S+I K G ++
Sbjct: 137 ---PEKNKVSWTVMLIGFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 410 AAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
A+ IFD M ER V +W T++ GY A ++F M + V+W +++ GY+
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYV 245
Query: 470 QSGAEDQALDLFK---------------------RIEK-----DGKIKRNVASWNSLIAG 503
Q+G + A +LF+ I K D +RN ASW ++I
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
++G + +A+ +F MQ + P T++SIL A+L + K++H +R +
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ V+++L+ Y K G L+ S+ IFD P KDII WN ++S
Sbjct: 366 VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 108/211 (51%), Gaps = 19/211 (9%)
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
T N I S+ G + A+++FD + + SWN+++ GY A +LF +M D
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
N+++WN L++GYM++G D+A +F D +RNV SW +L+ G++ +G+ D A
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVF-----DLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNI-LID 572
+F +M N V+ +L F + ++ + C L + + +++ +I
Sbjct: 130 ESLFWKMP----EKNKVSWTVMLIGF---LQDGRIDD--ACKLYEMIPDKDNIARTSMIH 180
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
K G + +R IFD + + +I+W M++
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVT 211
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
++ + + T ++ K G + EAR++FDEM ER++ TW+ M+ + ++ +
Sbjct: 166 MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKI 225
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM-CSSIRVNNSIMAVYA 232
F +P++ ++ G ++ GR+ + + M + N++++
Sbjct: 226 F------DVMPEK---TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLG 276
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-N 291
+ GE+ A+++F SM ER+ +W +I +NG +A F MQ++GV P T +
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 292 IL-----IAS-------YNQLGRCDIAVD----------------LMRKMESFGLTP--D 321
IL +AS + QL RC VD L++ F P D
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+ W+S+ISG+ G AL + +M LSG +PN +T +I+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 381 GIGVKMSLVDDVLTGNS-LIDMYSKCGDLEAAQRIFD-MMYERDVYSWNTIIGGYCH--- 435
+ V + + ++DM + G A + D M E D W +++G C
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA-CRTHS 515
Query: 436 ----AGFCGK 441
A FC K
Sbjct: 516 QLDVAEFCAK 525
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 229/520 (44%), Gaps = 65/520 (12%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
T + LQ C R G+++H R G + + +P T LV+MY+KCG + A VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDD-SPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
ER++F ++A+I S + ++ + +M +G LPD++ P +L+ +L
Sbjct: 121 G-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSD 178
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD-SVTWNAIITGFC 263
+ +H +A + G S V + ++ Y+K + A+K+F + +RD SV WNA++ G+
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 264 QNGDIEQARKYFDAMQEEGVE-----------------------------------PGLV 288
Q E A F M+EEGV +V
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
N LI Y + + A + M+ D++TW+S++ G L L +M
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDE----RDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD----DVLTGNSLIDMYSK 404
L SG+ P+ +T+ EIHG + L++ + NSL+DMY K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK-AYELFMKMQDSDSPPNVVTWNA 463
CGDL A+ +FD M +D SWN +I GY CG+ A ++F M + P+ +T+
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGY-GVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
L+ SG ++ + ++E I + +I G+ DK + +
Sbjct: 474 LLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDML---GRADKLEEAYELAISK 530
Query: 524 QIAPNSVTVLSILPA---FAN----LVAGKKVKEI---HC 553
I N V SIL + N LVAGK++ E+ HC
Sbjct: 531 PICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHC 570
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 50/347 (14%)
Query: 298 NQLGRCDIAVDLMRKMESFGLTP-DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
N +C + + R + FG + DV+ ++++ISGF G A++ R+M +G+ P+
Sbjct: 104 NMYAKCGL---MRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPD 160
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
T ++HG+ K+ D G+ L+ YSK +E AQ++FD
Sbjct: 161 KYTFPSLLKGSDAMELSDVK-KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFD 219
Query: 417 MMYERD-VYSWNTIIGGYCHAGFCGKAYELFMKMQD------------------------ 451
+ +RD WN ++ GY A +F KM++
Sbjct: 220 ELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDID 279
Query: 452 -----------SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+ S ++V NALI Y +S ++A +F+ +++ R++ +WNS+
Sbjct: 280 NGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDE-----RDLFTWNSV 334
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
+ G D + +F RM I P+ VT+ ++LP L + ++ +EIH + L
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 561 VSEIS----VSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ S + N L+D Y K G+L +R +FD + +KD SWNIM++
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMIN 441
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 67 LSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV-ETK 125
DA+ + + E+G V T ++L + I+ GR +H G+ + V
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ MY K L EA +F+ M ER+LFTW++++ + + LF M+ G PD
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGM----CSSIRVNNSIMAVYAKCGEMGFAK 241
L +L CG+ L GR IH I G+ S+ ++NS+M +Y KCG++ A+
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
+F SM +DS +WN +I G+ E A F M GV+P +T+ L+ + + G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 302 RCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDL 344
+ + + +ME+ + + P ++ +I + + A +L
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYEL 526
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 42/344 (12%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG--RELHARI 112
+A ++ NG DA+ + G T+ +LL+ D +E+ +++H
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG---SDAMELSDVKKVHGLA 186
Query: 113 GLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERN-LFTWSAMIGACSREKSWEEV 170
+G + + +V + LV+ YSK + +A+KVFDE+ +R+ W+A++ S+ +E+
Sbjct: 187 FKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ +F M G + +L A GD++ GR IH +A++ G S I V+N+++ +
Sbjct: 247 LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 231 YAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
Y K + A +F++MDERD TWN+++ GD + F+ M G+ P +VT
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTL 366
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGL-------------------------------- 318
++ + +L ++ M GL
Sbjct: 367 TTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD 426
Query: 319 ---TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
D +W+ MI+G+ + ALD+ M +GV+P+ IT
Sbjct: 427 SMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
D P T +L+ Y + G +A+ +F G +R+V +N+LI+GF+ +G
Sbjct: 93 DDSPRAGT--SLVNMYAKCGLMRRAVLVF------GGSERDVFGYNALISGFVVNGSPLD 144
Query: 513 AMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
AM+ +R M+ I P+ T S+L ++ + VK++H A + S+ V + L+
Sbjct: 145 AMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVT 203
Query: 573 SYAKSGNLMYSRRIFDGLPLK-DIISWNIMLS 603
SY+K ++ ++++FD LP + D + WN +++
Sbjct: 204 SYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 231/517 (44%), Gaps = 77/517 (14%)
Query: 92 LLQSCIDRDCIEVGRELHA-RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERN 150
LL+S +RD G+ LHA + + + ++ V++YSKCG LS AR F E N
Sbjct: 15 LLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 151 LFTWSAMIGACSREK------------------SWEEVVD-------------LFYDMVR 179
+F+++ ++ A +++ S+ ++ LF M +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
GF D F L ++ AC C ++ + +H ++ G S VNN+ + Y+K G +
Sbjct: 134 LGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 240 AKKLFKSMDE-RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW-------- 290
A +F MDE RD V+WN++I + Q+ + +A + M +G + + T
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 291 ---------------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ LI Y++ G CD D + + L+PD+
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLV 310
Query: 324 TWSSMISGFTQKGR-TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
W++MISG++ + A+ R+M G P+ + +IHG+
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 383 GVKMSLVDDVLT-GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+K + + ++ N+LI +Y K G+L+ A+ +FD M E + S+N +I GY G +
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A L+ +M DS PN +T+ A+++ G D+ + F +++ KI+ ++ +I
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++G+ ++A + M + P SV ++L A
Sbjct: 491 DLLGRAGKLEEAERFIDAMPY---KPGSVAWAALLGA 524
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 209/509 (41%), Gaps = 116/509 (22%)
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
DL TG+ +H++ ++ + SS ++N + +Y+KCG + +A+ F S +E + ++N I+
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY----------------NQLG--- 301
+ ++ I AR+ FD E +P V++N LI+ Y +LG
Sbjct: 83 AYAKDSKIHIARQLFD----EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV 138
Query: 302 ----------RCDIAVDLMRKMESFGLTP------------------------------- 320
C VDL++++ F ++
Sbjct: 139 DGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 321 -----DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
D +W+SMI + Q AL L ++M+ G + + T+
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA---AQRIFDMMYERDVYSWNTIIGG 432
+ HG +K + G+ LID YSKCG + ++++F + D+ WNT+I G
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 433 YC-HAGFCGKAYELFMKMQ-----------------------------------DSDSPP 456
Y + +A + F +MQ S P
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 457 NVVTWN-ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
N ++ N ALI+ Y +SG A +F R+ + N S+N +I G+ Q G +A+
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPE-----LNAVSFNCMIKGYAQHGHGTEALL 433
Query: 516 IFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE-IHCCALRRNLVSEISVSNILIDSY 574
+++RM IAPN +T +++L A A+ + +E + + E + +ID
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 575 AKSGNLMYSRRIFDGLPLK-DIISWNIML 602
++G L + R D +P K ++W +L
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 187/441 (42%), Gaps = 55/441 (12%)
Query: 70 AVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF--VETKLV 127
A+ + + + G +V T L+ +C DR +++ ++LH + G + + V V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHC-FSVSGGFDSYSSVNNAFV 180
Query: 128 SMYSKCGHLSEARKVFDEMRE-RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
+ YSK G L EA VF M E R+ +W++MI A + K + + L+ +M+ GF D
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG---EMGFAKKL 243
F L +L A L GR H I+ G + V + ++ Y+KCG M ++K+
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 244 FKSMDERDSVTWNAIITGFCQNGDI-EQARKYFDAMQEEGVEPGLVTW------------ 290
F+ + D V WN +I+G+ N ++ E+A K F MQ G P ++
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 291 ------------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
N LI+ Y + G A + +M + +++
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL----NAVSFN 416
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVK 385
MI G+ Q G AL L ++ML SG+ PN IT E + +
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGG---YCHAGFCGK 441
+ + + +ID+ + G LE A+R D M Y+ +W ++G + + +
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 536
Query: 442 AYELFMKMQDSDSPPNVVTWN 462
A M MQ + P V+ N
Sbjct: 537 AANELMVMQPLAATPYVMLAN 557
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 48/253 (18%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
+V + N ++ Y+K + A+++FD + + D S+NT+I GY A A LF +M+
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 451 -------------------------------------DSDSPPNVVTWNALITGYMQSGA 473
DS S N NA +T Y + G
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGL 188
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
+A+ +F +++ R+ SWNS+I + Q + KA+ +++ M F + T+
Sbjct: 189 LREAVSVFYGMDE----LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLA 244
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL--MY-SRRIFDGL 590
S+L A +L ++ H ++ V + LID Y+K G MY S ++F +
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 591 PLKDIISWNIMLS 603
D++ WN M+S
Sbjct: 305 LSPDLVVWNTMIS 317
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/547 (23%), Positives = 229/547 (41%), Gaps = 85/547 (15%)
Query: 93 LQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL 151
L+ C + G + A + G + N F+ ++SMY LS+A KVFDEM ERN+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 152 FTWSAMIGACSREKSWEEVVDLFYDMV-RHGFLPDEFLLPKILQACGKCGDLETGRLIHS 210
TW+ M+ + + + ++L+ M+ +EF+ +L+ACG GD++ G L++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 211 VAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQ 270
+ + + + NS++ +Y K G + A FK + S +WN +I+G+C+ G +++
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 271 ARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMIS 330
A F M +P +V+WN L IS
Sbjct: 192 AVTLFHRMP----QPNVVSWNCL-----------------------------------IS 212
Query: 331 GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD 390
GF KG AL+ L +M G+ + + ++H VK L
Sbjct: 213 GFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLES 271
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIF---DMMYERDVYSWNTIIGGYC------------- 434
++LIDMYS CG L A +F + V WN+++ G+
Sbjct: 272 SPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLL 331
Query: 435 ---HAGFCGKAYELFMKMQDSDSPPNV-------------------VTWNALITGYMQSG 472
+ C +Y L ++ + N+ + + L+ + G
Sbjct: 332 QIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVG 391
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
A LF R+ +++ +++ LI G ++SG A +FR + + + V
Sbjct: 392 NIQDAHKLFHRLP-----NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
+IL ++L + K+IH +++ SE + L+D Y K G + +FDG+
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 593 KDIISWN 599
+D++SW
Sbjct: 507 RDVVSWT 513
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 201/447 (44%), Gaps = 38/447 (8%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+S Y K G + EA +F M + N+ +W+ +I +K ++ M R G + D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRALEFLVRMQREGLVLD 237
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF- 244
F LP L+AC G L G+ +H ++ G+ SS ++++ +Y+ CG + +A +F
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 245 --KSMDERDSVTWNAIITGFCQNGD----------IEQARKYFDAMQEEG---------- 282
K WN++++GF N + I Q+ FD+ G
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 283 VEPGLVTWNILIASYNQLGRC--DIAVDLMRKMES-------FGLTP--DVYTWSSMISG 331
+ GL ++++ S +L I VDL + + F P D+ +S +I G
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ G A L R+++ G++ + V +IHG+ +K +
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
+T +L+DMY KCG+++ +FD M ERDV SW II G+ G +A+ F KM +
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
PN VT+ L++ SG ++A + ++ + ++ + + ++ Q+G
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 512 KAMQIFRRMQFFQIAPNSVTVLSILPA 538
+A ++ +M + P+ S+L A
Sbjct: 598 EANELINKM---PLEPDKTIWTSLLTA 621
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 141/271 (52%), Gaps = 5/271 (1%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
T L+ CI+ + +G ++H+ + + G ++ V + LV +++ G++ +A K+F +
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
+++ +S +I C + LF ++++ G D+F++ IL+ C L G+
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGK 463
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
IH + I+ G S +++ +Y KCGE+ LF M ERD V+W II GF QNG
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTW 325
+E+A +YF M G+EP VT+ L+++ G + A + M+S +GL P + +
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHY 583
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
++ Q G A +L+ KM L EP+
Sbjct: 584 YCVVDLLGQAGLFQEANELINKMPL---EPD 611
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 405 CGDLEAAQR-------IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
CG ++A +R + ++V+ N +I Y A+++F D S N
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF----DEMSERN 70
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+VTW +++GY G ++A++L++R+ + N +++++ G + ++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS-NILIDSYAK 576
R+ + + V + S++ + K + I + + ++ S S N LI Y K
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYV-----KNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
+G + + +F +P +++SWN ++S
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLIS 212
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 202/438 (46%), Gaps = 52/438 (11%)
Query: 107 ELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK 165
++HAR+ GN + +L+ S+ G S ++ + + L+ + + A
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSS 97
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
S ++ + ++D++R GF+PD + ++ K +++G++ H AI+HG + V N
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
S+M +Y CG + AKKLF + +RD V+WN+II G +NGD+ A K FD M ++ +
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNI-- 215
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI-----SGFTQKGRTYH 340
++WNI+I++Y +++ L R+M G + T ++ S ++GR+ H
Sbjct: 216 --ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A L+R L S V+ +LID
Sbjct: 274 A-SLIRTFLNS---------------------------------------SVVIDTALID 293
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
MY KC ++ A+RIFD + R+ +WN +I +C G ELF M + P+ VT
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVT 353
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ ++ G ++G Q + + + +IK N + + +G ++A + + +
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNL 413
Query: 521 QFFQIAPNSVTVLSILPA 538
+ P S ++L +
Sbjct: 414 PDEDVTPESTKWANLLSS 431
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 47/315 (14%)
Query: 289 TWNI-LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
+W I L+ S ++ G V + R + +Y + + + AL
Sbjct: 55 SWAIRLLKSSSRFGDSSYTVSIYRSIGK------LYCANPVFKAYLVSSSPKQALGFYFD 108
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
+L G P+S T HG +K + NSL+ MY+ CG
Sbjct: 109 ILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGA 168
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
L+ A+++F + +RD+ V+WN++I G
Sbjct: 169 LDLAKKLFVEIPKRDI-----------------------------------VSWNSIIAG 193
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
+++G A LF D +N+ SWN +I+ +L + ++ +FR M
Sbjct: 194 MVRNGDVLAAHKLF-----DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
N T++ +L A K+ + +H +R L S + + LID Y K + +RRIF
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 588 DGLPLKDIISWNIML 602
D L +++ ++WN+M+
Sbjct: 309 DSLSIRNKVTWNVMI 323
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 208/468 (44%), Gaps = 53/468 (11%)
Query: 85 RPITYMNLLQSCIDRDCIEVGRELHARI-GLVGNVNPFVETKLVSMYSKCGHLSEARKVF 143
R T +++L+SC + I +HA+I + + FV +L+ + S + A VF
Sbjct: 28 RRKTLISVLRSCKN---IAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVF 84
Query: 144 DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLE 203
+ N++ ++AMI + V L++ M+ + LPD +++ +L+AC DL+
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLK 140
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFC 263
R IH+ ++ G SS V +M +Y K GE+ AKK+F M +RD V +I +
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ G I++A + F D+ + D
Sbjct: 201 ECGFIKEALELFQ---------------------------DVKI------------KDTV 221
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
W++MI G + AL+L R+M + V N T +H
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
+ GN+LI+MYS+CGD+ A+R+F +M ++DV S+NT+I G G +A
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
F M + PN VT AL+ G D L++F +++ ++ + + ++
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKV 548
+ G+ ++A +R ++ I P+ + T+LS N+ G+K+
Sbjct: 402 LGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 446
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 26 FEFI--ASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSK 83
FE I ST + Y S S P A ++ S+G +D V++ + +
Sbjct: 65 FELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIH--NS 122
Query: 84 VRPITYM--NLLQSCIDRDCIEVGRELHARIGLVG------------------------- 116
V P Y+ ++L++C + C RE+HA++ +G
Sbjct: 123 VLPDNYVITSVLKACDLKVC----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAK 178
Query: 117 -------NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
+ + T +++ YS+CG + EA ++F +++ ++ W+AMI R K +
Sbjct: 179 KMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK 238
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
++LF +M +EF +L AC G LE GR +HS M S V N+++
Sbjct: 239 ALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALIN 298
Query: 230 VYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
+Y++CG++ A+++F+ M ++D +++N +I+G +G +A F M G P VT
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 290 WNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
L+ + + G DI +++ M+ F + P + + ++ + GR A + +
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Query: 349 LLSGVEPNSI 358
+EP+ I
Sbjct: 419 ---PIEPDHI 425
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 44/298 (14%)
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
+VD + S+ P+VY +++MI GF GR+ + L +M+ + V P++ +
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
EIH +K+ G ++++Y K G+L A+++FD M +RD +
Sbjct: 136 ACDLKVCR----EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 191
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+I Y CG F+K +AL+LF+
Sbjct: 192 ATVMINCYSE---CG-----FIK---------------------------EALELFQ--- 213
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
D KIK V W ++I G +++ + +KA+++FR MQ ++ N T + +L A ++L A
Sbjct: 214 -DVKIKDTVC-WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGAL 271
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ + +H + + V N LI+ Y++ G++ +RR+F + KD+IS+N M+S
Sbjct: 272 ELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 58/472 (12%)
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
NL+T++ MI R + + M++ G+ P L +L G C R+
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN--GFC---HGNRIS 152
Query: 209 HSVAIRHGMCS------SIRVNNSIMAVYA--KCGE-MGFAKKLFKSMDERDSVTWNAII 259
+VA+ M ++ + ++ K E + +++ + D VT+ A+I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
G C+ G+ + A + M++ +E +V ++ +I S + D A++L +M++ G+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PDV+T+SS+IS GR A LL ML + PN
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN----------------------- 309
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCH 435
V+T NSLID ++K G L A+++FD M +R ++ ++N++I G+C
Sbjct: 310 ------------VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
+A ++F M D P+VVT+N LI G+ ++ ++LF+ + + G + N
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG-NTV 416
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA 555
++ +LI GF Q+ D A +F++M + PN +T ++L +K +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 556 LRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
+ + +I NI+ + K+G + +F L LK D+I++N M+S
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 223/474 (47%), Gaps = 17/474 (3%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+++ LN C +S+AVA++D + E G + +T+ L+ + L R+
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM- 196
Query: 114 LVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
+V P + T +++ K G A + ++M E ++ +S +I + + +
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G PD F ++ G + S + + ++ NS+
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ +AK G++ A+KLF M +R + VT+N++I GFC + +++A++ F M +
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + + ++L R M GL + T++++I GF Q +A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV PN +T + K + D+ T N + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K G +E +F + + DV ++NT+I G+C G +AY LF+KM++ P+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
T+N LI +++ G + + +L K + + + + +++ L+ L G+ DK
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 168/358 (46%), Gaps = 41/358 (11%)
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
R+ ++ NA++ + +++A F M + P +V ++ L+++ ++ + D+ +
Sbjct: 33 REKLSRNALL-----HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISF 87
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
KME G++ ++YT++ MI+ ++ + AL +L KM+ G P+ +T+
Sbjct: 88 GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN-------- 139
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
SL++ GN + + + ++ +M Y+ D ++ T+
Sbjct: 140 -----------------SLLNGFCHGNRISEAVA------LVDQMVEMGYQPDTVTFTTL 176
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGK 489
+ G +A L +M P++VT+ A+I G + G D AL+L ++EK GK
Sbjct: 177 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GK 235
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
I+ +V ++++I + D A+ +F M I P+ T S++ N
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 550 EIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
+ L R + + N LID++AK G L+ + ++FD + + +I+++N +++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 255/570 (44%), Gaps = 60/570 (10%)
Query: 55 DAQLNQLC--SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI 112
+ +L LC SN L +AV++ + GS + NL+ + E+ + ++
Sbjct: 40 ETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKM 98
Query: 113 GLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSW 167
FV + L+ Y + A V M +R N++ + ++ R
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLEC 158
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+ V L +M R+ +PD F +++ + +LE + + G S+ +
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 228 MAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G+M A K M E D V + ++I GFC G++++ + FD + E G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +T+N LI + +LG+ A ++ M G+ P+VYT++ +I G G+T AL
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
LL M+ EPN++T N +I+
Sbjct: 339 LLNLMIEKDEEPNAVTY-----------------------------------NIIINKLC 363
Query: 404 KCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYE-LFMKMQDSD-SPPN 457
K G + A I ++M +R D ++N ++GG C G +A + L++ ++DS + P+
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 458 VVTWNALITGYMQSGAEDQALDLFK-RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
V+++NALI G + QALD++ +EK G R + N L+ L++G +KAM++
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR--VTTNILLNSTLKAGDVNKAMEL 481
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
++++ +I NS T +++ F K + C L + N L+ S K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 577 SGNLMYSRRIFDGLP----LKDIISWNIML 602
G+L + R+F+ + D++S+NIM+
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 219/503 (43%), Gaps = 51/503 (10%)
Query: 135 HLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLP 190
L +A ++ +EM+ +L TW +I A + +E + +M G D +
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
+++ CG+L+ G+ + + G N+++ + K G++ A ++F+ M ER
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 251 ----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA 306
+ T+ +I G C G ++A + + M E+ EP VT+NI+I + G A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 307 VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL--SGVEPNSITVXXXX 364
V+++ M+ PD T++ ++ G KG A LL ML S +P+ I+
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA----QRIFDMMYE 420
+I+ + V+ D +T N L++ K GD+ A ++I D
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 421 RDVYSWNTIIGGYCHAGFCG-----------------------------------KAYEL 445
R+ ++ +I G+C G +A+ L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F +MQ ++ P+VV++N +I G +++G A L + + G + ++ +++ LI FL
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG-LSPDLFTYSKLINRFL 610
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEIS 565
+ G D+A+ F +M P++ S+L + K+ E+ + +++V +
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Query: 566 VSNILIDSYAK-SGNLMYSRRIF 587
++ ++D S N+ ++R+
Sbjct: 671 LTCTVMDYMCNSSANMDLAKRLL 693
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 137/305 (44%), Gaps = 34/305 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVG 116
+N+LC +G ++DAV I++ + ++ ++ ITY LL C D E + L+ +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
+P ++ +++A+I +E + +D++
Sbjct: 419 YTDP-----------------------------DVISYNALIHGLCKENRLHQALDIYDL 449
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
+V D +L + K GD+ + + + +++ + K G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 237 MGFAKKLFKSM---DERDSV-TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
+ AK L M + + SV +N +++ C+ G ++QA + F+ MQ + P +V++NI
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
+I + G A L+ M GL+PD++T+S +I+ F + G A+ KM+ SG
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 353 VEPNS 357
EP++
Sbjct: 630 FEPDA 634
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
DV+S+NT+I G+C KA EL +M+ S ++VTW LI + ++G D+A+
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
K ++ G ++ ++ + SLI GF G+ D+ +F + +P ++T +++ F
Sbjct: 236 KEMKFMG-LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKD----IIS 597
L K+ EI + R + + LID G + ++ + + KD ++
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 598 WNIMLSQ 604
+NI++++
Sbjct: 355 YNIIINK 361
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 226/493 (45%), Gaps = 47/493 (9%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN-VNPFV 122
+G +V + + + G + + +L C D ++ G+++H+ + G + V
Sbjct: 168 SGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSV 226
Query: 123 ETKLVSMYSKCGHLSEARKVFDE--MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
L++MY C + +A VF+E + R+ T++ +I + K E ++ +F M+
Sbjct: 227 VNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEA 285
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
P + ++ G C G +H +AI+ G V+N+ M +Y+ + G A
Sbjct: 286 SLRPTDLTFVSVM---GSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW---------- 290
K+F+S++E+D VTWN +I+ + Q + A + M GV+P T+
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 291 ----------------------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
N LI++Y++ G+ + A L + L ++ +W+++
Sbjct: 403 DVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER----SLRKNLISWNAI 458
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVE--PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
ISGF G + L+ +L S V P++ T+ + H ++
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
+ L GN+LI+MYS+CG ++ + +F+ M E+DV SWN++I Y G A +
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 447 MKMQDSDSP-PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
MQD P+ T++A+++ +G ++ L++F + + + RNV ++ L+
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 506 QSGQKDKAMQIFR 518
++G D+A + +
Sbjct: 639 RAGHLDEAESLVK 651
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 210/484 (43%), Gaps = 79/484 (16%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERN-LFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
T L+S K G + A +VFD+M ER+ + W+AMI C E V+LF +M + G
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
D+F IL C G L+ G+ +HS+ I+ G + V N+++ +Y C + A
Sbjct: 187 RHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL 245
Query: 243 LFKSMD--ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN-- 298
+F+ D RD VT+N +I G +++ F M E + P +T+ ++ S +
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA 304
Query: 299 QLGR-----------------CDIAVDLMRKMESFGLTPDVY---------TWSSMISGF 332
+G + + + E FG V+ TW++MIS +
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 333 TQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
Q A+ + ++M + GV+P+ T + +K L +
Sbjct: 365 NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKI 421
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
N+LI YSK G +E A +F+ +++ SWN II G+ H GF + E F + +S
Sbjct: 422 EISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
Query: 453 DSP--PNVVTW-----------------------------------NALITGYMQSGAED 475
+ P+ T NALI Y Q G
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ-FFQIAPNSVTVLS 534
+L++F ++ +++V SWNSLI+ + + G+ + A+ ++ MQ ++ P++ T +
Sbjct: 542 NSLEVFNQMS-----EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSA 596
Query: 535 ILPA 538
+L A
Sbjct: 597 VLSA 600
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/547 (23%), Positives = 223/547 (40%), Gaps = 120/547 (21%)
Query: 162 SREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
+R + LF D+ R L PD++ + + D G +H AIR G+
Sbjct: 32 TRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCH 91
Query: 221 IRVNNSIMAVYA-------------------------------KCGEMGFAKKLFKSMDE 249
V+N+++++Y K G++ +A ++F M E
Sbjct: 92 SHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE 151
Query: 250 RDSVT-WNAIITGFCQNGDIEQARKYFDAMQEEGVEP---GLVTW--------------- 290
RD V WNA+ITG ++G E + + F M + GV G T
Sbjct: 152 RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQV 211
Query: 291 ----------------NILIASYNQLGRCDIAVDLMRKMESFGLT-PDVYTWSSMISGFT 333
N LI Y C + VD E + D T++ +I G
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFN---CQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
R +L + RKML + + P +T ++HG+ +K L
Sbjct: 269 GFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGH---QVHGLAIKTGYEKYTL 324
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
N+ + MYS D AA ++F+ + E+D+ +WNT+I Y A A ++ +M
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 454 SPPNVVTW--------------------------------NALITGYMQSGAEDQALDLF 481
P+ T+ NALI+ Y ++G ++A LF
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLF 444
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM--QFFQIAPNSVTV---LSIL 536
+R +++N+ SWN++I+GF +G + ++ F + +I P++ T+ LSI
Sbjct: 445 ER-----SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 537 PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDII 596
+ ++L+ G + H LR E + N LI+ Y++ G + S +F+ + KD++
Sbjct: 500 VSTSSLMLGSQT---HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVV 556
Query: 597 SWNIMLS 603
SWN ++S
Sbjct: 557 SWNSLIS 563
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 329 ISGFTQKGRTYHALDLLRKM-LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
++G T+ G +AL L + + + P+ +V ++H ++
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
L+ N+L+ +Y + G+L + ++ FD + E DVYSW T++ G A+E+F
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
KM + D +V WNA+ITG +SG + +++LF+ + K G
Sbjct: 148 KMPERD---DVAIWNAMITGCKESGYHETSVELFREMHKLG 185
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 221/493 (44%), Gaps = 51/493 (10%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+ + LN C +SDAVA++D + E G + IT+ L+ + L R+
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142
Query: 114 LVGNVNPFVETKLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G P + T V + C G + A + ++M E ++ ++ +I + + +
Sbjct: 143 QRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G P+ ++ G + S I + ++ N++
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G+ A+KL M +R D T+N++I GFC + +++A++ F+ M +
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P L T+N LI + + R + +L R+M GL D T++++I G G +A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV P D++T + L+D
Sbjct: 382 VFKQMVSDGVPP-----------------------------------DIMTYSILLDGLC 406
Query: 404 KCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
G LE A +FD M + D+Y + T+I G C AG ++LF + PNVV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+N +I+G +A L K++++DG + + ++N+LI L+ G K + ++ R
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 520 MQFFQIAPNSVTV 532
M+ + ++ T+
Sbjct: 526 MRSCRFVGDASTI 538
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 19/390 (4%)
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
NL+T++ +I R + L M++ G+ P L +L G C R+
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN--GYC---HGKRIS 97
Query: 209 HSVAIRHGMCS------SIRVNNSIMAVYA--KCGE-MGFAKKLFKSMDERDSVTWNAII 259
+VA+ M +I I ++ K E + ++ + + + VT+ ++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
G C+ GDI+ A + M+ +E +V +N +I S + D A++L ++ME+ G+
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
P+V T+SS+IS GR A LL M+ + PN +T ++
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY----SWNTIIGGYCH 435
H +K S+ D+ T NSLI+ + L+ A+++F+ M +D + ++NT+I G+C
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
+ ELF +M + VT+ LI G G D A +FK++ DG + ++
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIM 396
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
+++ L+ G +G+ +KA+++F MQ +I
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 161/362 (44%), Gaps = 19/362 (5%)
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
T+N +I FC+ I A M + G EP +VT + L+ Y R AV L+ +M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
G PD T++++I G + A+ L+ +M+ G +PN +T
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTI 429
+ + DV+ N++ID K ++ A +F M + +V +++++
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG----AEDQALDLFKRIE 485
I C G A +L M + PN+VT+NALI +++ G AE D+ KR
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-- 284
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
I ++ ++NSLI GF + DKA Q+F M P+ T +++ F
Sbjct: 285 ---SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF-----DGLPLKDIISWNI 600
+ E+ R LV + LI G+ ++++F DG+P DI++++I
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSI 400
Query: 601 ML 602
+L
Sbjct: 401 LL 402
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 153/314 (48%), Gaps = 5/314 (1%)
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
P + +N L+++ ++ + D+ + L KM+ G++ ++YT++ +I+ F ++ + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
L KM+ G EP+ +T+ + V+M D +T +LI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 405 CGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
A + D M +R ++ ++ ++ G C G A+ L KM+ + +VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+N +I + D AL+LFK +E G I+ NV +++SLI+ G+ A Q+ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+I PN VT +++ AF + +++H ++R++ +I N LI+ + L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 581 MYSRRIFDGLPLKD 594
++++F+ + KD
Sbjct: 307 DKAKQMFEFMVSKD 320
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 207/423 (48%), Gaps = 14/423 (3%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
TKL++ + G EA +F+ + E +L T++ ++ A +R+K + ++ L + +
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
+G PD L I+ A + G+L+ I G + N+++ Y K G++
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 240 AKKLFKSM--DER---DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
+ +L M DE + T N ++ +C IE+A MQ GV+P +VT+N L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 295 ASYNQLGRCDIAVDLM-RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
+Y ++G A D++ +M + P+V T ++++G+ ++G+ AL +M GV
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
PN E+ + + + DV+T ++L++ +S GD++ +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 414 IFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
I+ M E D+++++ + GY AG KA ++ +M+ PNVV + +I+G+
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS 529
+G +A+ ++K++ + N+ ++ +LI GF ++ Q KA ++ + M+ + P
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742
Query: 530 VTV 532
T+
Sbjct: 743 KTM 745
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 205/451 (45%), Gaps = 65/451 (14%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N L G +A +I ++L E+G K ITY L+ + + + H+ + L+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ------KHFHSLLSLISK 379
Query: 118 V-------NPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKS 166
V + + +++ S+ G+L +A K+F++M+E T++ +I +
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 167 WEEVVDLFYDMVRHGFL-PDEFLLPKILQA-CGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
EE L M+R L P++ ++QA C + E +++ + +G+ +
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ-SYGVKPDVVTF 498
Query: 225 NSIMAVYAKCGEMGFAK-----KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
N++ YA+ G A+ ++ + + + T I+ G+C+ G +E+A ++F M+
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
E GV P L +N LI + + D +++ ME FG+ PDV T+S++++ ++ G
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
++ ML G++P +IH + L
Sbjct: 619 RCEEIYTDMLEGGIDP----------------------DIHAFSI-------------LA 643
Query: 400 DMYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQD-SDS 454
Y++ G+ E A++I + M + +V + II G+C AG KA +++ KM
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
PN+ T+ LI G+ ++ +A +L K +E
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 15/348 (4%)
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
D + ++ G + G ++A F+ + EEG +P L+T+ L+ + + + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 311 RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
K+E GL PD ++++I+ ++ G A+ + KM SG +P + T
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 371 XXXXXXXEIHGIGVKMSLVDDVL-----TGNSLIDMYSKCGDLEAAQRIFDMM----YER 421
+ + M L D++L T N L+ + +E A I M +
Sbjct: 438 GKLEESSRL----LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFM-KMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
DV ++NT+ Y G A ++ + +M + PNV T ++ GY + G ++AL
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
F R+++ G + N+ +NSLI GFL D ++ M+ F + P+ VT +++ A++
Sbjct: 554 FYRMKELG-VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
++ K+ +EI+ L + +I +IL YA++G + +I +
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
DV S ++ G G +A+ +F + + P+++T+ L+T + L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
++EK+G +K + +N++I +SG D+AM+IF +M+ P + T +++ +
Sbjct: 378 SKVEKNG-LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVS-NILIDSYA------KSGNLMYSRRIFDGLPLKD 594
+ ++ + LR ++ + NIL+ ++ ++ N++Y + + P D
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP--D 494
Query: 595 IISWNIM 601
++++N +
Sbjct: 495 VVTFNTL 501
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 224/491 (45%), Gaps = 37/491 (7%)
Query: 138 EARKVFDEM-RER---NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
+A +F EM R R L +S + +R K ++ V+DL M G + + L ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 194 QACGKCGDLE-----TGRLIHS---------VAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
C +C L G++I + +G+C RV+ ++ V + EMG
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV-DRMVEMGH 173
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
L +T NA++ G C NG + A D M E G +P VT+ ++ +
Sbjct: 174 KPTL---------ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G+ +A++L+RKME + D +S +I G + G +A +L +M + G + + I
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
++ +K + DV+ ++LID + K G L A+ + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 420 ER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+R D ++ ++I G+C KA + M PN+ T+N LI GY ++ D
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
L+LF+++ G + V ++N+LI GF + G+ + A ++F+ M ++ P+ V+ +
Sbjct: 405 DGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 536 LPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-- 593
L + +K EI + + +I + NI+I + + + +F LPLK
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 594 --DIISWNIML 602
D+ ++NIM+
Sbjct: 524 KPDVKTYNIMI 534
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 223/505 (44%), Gaps = 82/505 (16%)
Query: 49 PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL 108
P ++A +N LC NG +SDAV ++D + E G + +TY +L+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK-------------- 220
Query: 109 HARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSRE 164
+ K G + A ++ +M ER + +S +I ++
Sbjct: 221 --------------------VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
S + +LF +M GF D + +++ G + G + I+ + +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
++++ + K G++ A++L K M +R D+VT+ ++I GFC+ +++A D M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
+G P + T+NILI Y + D ++L RKM G+ D T++++I GF + G+
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A +L ++M+ V P D+++ L+D
Sbjct: 441 AKELFQEMVSRRVRP-----------------------------------DIVSYKILLD 465
Query: 401 MYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
G+ E A IF+ + E D+ +N II G C+A A++LF + P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+V T+N +I G + G+ +A LF+++E+DG N ++N LI L G K+ ++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 517 FRRMQFFQIAPNSVTVLSILPAFAN 541
++ + ++ TV ++ ++
Sbjct: 585 IEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 127/563 (22%), Positives = 236/563 (41%), Gaps = 51/563 (9%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLV 127
DAV + + + R I + L ++ +L ++ L G N + + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 128 SMYSKCGHLSEA----RKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
+ +C LS A K+ E + T+S +I E E ++L MV G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P L ++ G + L+ + G + ++ V K G+ A +L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 244 FKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
+ M+ER D+V ++ II G C++G ++ A F+ M+ +G + ++ + LI +
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
GR D L+R M +TPDV +S++I F ++G+ A +L ++M+ G+ P+++T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
+ + V ++ T N LI+ Y K ++ +F M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 420 ER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
R D ++NT+I G+C G A ELF +M P++V++ L+ G +G +
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 476 QALDLFKRIEKDG----------------------------------KIKRNVASWNSLI 501
+AL++F++IEK +K +V ++N +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN----LVAGKKVKEIHCCALR 557
G + G +A +FR+M+ +PN T ++ A + K ++EI C
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 558 RNLVSEISVSNILIDSYAKSGNL 580
+ + V ++L D K L
Sbjct: 595 VDASTVKMVVDMLSDGRLKKSFL 617
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 136/325 (41%), Gaps = 50/325 (15%)
Query: 31 STRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYM 90
+ +H +S ++ Y +D C L A +LD + +G T+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDG----FCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 91 NLLQSCIDRDCIEVGRELHARIGLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRER 149
L+ + I+ G EL ++ L G V V L+ + + G L A+++F EM R
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 150 ----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
++ ++ ++ E+ +++F + + +L+ G
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM------------------ELDIG 493
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITG 261
I+++ I HGMC++ +V++ A LF S+ + D T+N +I G
Sbjct: 494 --IYNIII-HGMCNASKVDD--------------AWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
C+ G + +A F M+E+G P T+NILI ++ G + L+ +++ G + D
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 322 VYTWSSMISGFTQKGRTYHA-LDLL 345
T M+ GR + LD+L
Sbjct: 597 ASTV-KMVVDMLSDGRLKKSFLDML 620
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 228/521 (43%), Gaps = 80/521 (15%)
Query: 90 MNLLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSE-ARKVFDE 145
+++L SC D + ++H R+ G++ N N L S+ +L++ AR VF E
Sbjct: 16 IHVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHE 72
Query: 146 MRE--------RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
+ F W+A+I + S K + + L M+ +G D+F L +L+AC
Sbjct: 73 YHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 132
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
+ G ++ G IH + G+ S + + N ++ +Y KCG +G ++++F M +RDSV++N+
Sbjct: 133 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 192
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR-CDIAVDLMRKMES- 315
+I G+ + G I AR+ FD M E L++WN +I+ Y Q DIA L M
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 316 ------------------------FGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKM- 348
F + P DV TW++MI G+ + G +HA L +M
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 349 -------------------------LLSGVE------PNSITVXXXXXXXXXXXXXXXXX 377
+ S +E P+ T+
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
++H V+ G +LIDMYSKCG ++ A +F+ + + + WN +IGG G
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A+++ ++++ P+ +T+ ++ SG + L F+ + + KI+ + +
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++ +SG + A + M + PN V + L A
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEM---PVEPNDVIWRTFLTA 528
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 192/423 (45%), Gaps = 28/423 (6%)
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI-----------MAVYAKCGEMGFAK 241
+ G C + IH I+ G+ + + I +A +A+C +
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
F + D WNA+I D QA M E GV + ++++ + ++LG
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
+ + ++ GL D++ + +I + + G L L R+M + +S++
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCG----CLGLSRQMFDRMPKRDSVSYN 191
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD-LEAAQRIFDMMYE 420
E+ + + M + ++++ NS+I Y++ D ++ A ++F M E
Sbjct: 192 SMIDGYVKCGLIVSARELFDL-MPMEM-KNLISWNSMISGYAQTSDGVDIASKLFADMPE 249
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
+D+ SWN++I GY G A LF M D VVTW +I GY + G A L
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRD----VVTWATMIDGYAKLGFVHHAKTL 305
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF-FQIAPNSVTVLSILPAF 539
F ++ R+V ++NS++AG++Q+ +A++IF M+ + P+ T++ +LPA
Sbjct: 306 FDQMPH-----RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 540 ANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
A L K ++H + + + LID Y+K G++ ++ +F+G+ K I WN
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 600 IML 602
M+
Sbjct: 421 AMI 423
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 55/294 (18%)
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
SFG D + W+++I + AL LL ML +GV + ++
Sbjct: 79 SFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVK 138
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC 434
+IHG K L D+ N LI +Y KCG L ++++FD M +RD S+N++I GY
Sbjct: 139 GGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 198
Query: 435 HAGFCGKAYELF----MKMQDSDSPPNVVTWNALITGYMQ-SGAEDQALDLFKRIEKDGK 489
G A ELF M+M+ N+++WN++I+GY Q S D A LF + +
Sbjct: 199 KCGLIVSARELFDLMPMEMK------NLISWNSMISGYAQTSDGVDIASKLFADMPE--- 249
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
+++ SWNS+I G+++ G+ + A +F ++P
Sbjct: 250 --KDLISWNSMIDGYVKHGRIEDAKGLF----------------DVMP------------ 279
Query: 550 EIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
RR++V+ + +ID YAK G + +++ +FD +P +D++++N M++
Sbjct: 280 -------RRDVVTWAT----MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ MYSKCG + A VF+ + +++ W+AMIG + E D+ + R PD
Sbjct: 391 LIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 450
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+ +L AC G ++ G L + R H + ++ ++ + ++ G + AK L
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 510
Query: 245 KSMD-ERDSVTWNAIITGFCQNGDIEQAR 272
+ M E + V W +T + + E
Sbjct: 511 EEMPVEPNDVIWRTFLTACSHHKEFETGE 539
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 197/421 (46%), Gaps = 47/421 (11%)
Query: 106 RELHARIGLVG--NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
+++H I + G ++ ++ LV Y + G+ A KVF M ++ +++ MI ++
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG--MCSSI 221
+ E + L++ MV G PDE+ + +L CG D+ G+ +H R G S++
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
++N+++ +Y KC E G AK+ F DAM+++
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAF-------------------------------DAMKKK 298
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG---RT 338
+ +WN ++ + +LG + A + +M D+ +W+S++ G+++KG RT
Sbjct: 299 DMR----SWNTMVVGFVRLGDMEAAQAVFDQMPK----RDLVSWNSLLFGYSKKGCDQRT 350
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
L ++ V+P+ +T+ +HG+ +++ L D ++L
Sbjct: 351 VREL-FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 399 IDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNV 458
IDMY KCG +E A +F E+DV W ++I G G +A +LF +MQ+ PN
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
VT A++T SG ++ L +F ++ + SL+ ++G+ ++A I +
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 519 R 519
+
Sbjct: 530 K 530
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETK 125
+A+ + + G + T ++LL C I +G+ +H R G V + N +
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNA 274
Query: 126 LVSMYSKC-------------------------------GHLSEARKVFDEMRERNLFTW 154
L+ MY KC G + A+ VFD+M +R+L +W
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSW 334
Query: 155 SAMIGACSREKSWEEVV-DLFYDM-VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
++++ S++ + V +LFY+M + PD + ++ G+L GR +H +
Sbjct: 335 NSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV 394
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR 272
IR + ++++++ +Y KCG + A +FK+ E+D W ++ITG +G+ +QA
Sbjct: 395 IRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQAL 454
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISG 331
+ F MQEEGV P VT ++ + + G + + + M + FG P+ + S++
Sbjct: 455 QLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDL 514
Query: 332 FTQKGRTYHALDLLRKML 349
+ GR A D+++K +
Sbjct: 515 LCRAGRVEEAKDIVQKKM 532
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 140/324 (43%), Gaps = 81/324 (25%)
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
G WN L+ Y +LG +A + +M PDV +++ MI G+ ++G + AL L
Sbjct: 165 GNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAKQGFSLEALKLY 220
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV--DDVLTGNSLIDMYS 403
KM+ G+EP+ TV +HG + V +++ N+L+DMY
Sbjct: 221 FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYF 280
Query: 404 KC-------------------------------GDLEAAQRIFDMMYERDVYSWNTIIGG 432
KC GD+EAAQ +FD M +RD+ SWN+++ G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 433 YCHAGFCGK--AYELFMKMQDSDS-PPNVVTWNALITG---------------------- 467
Y G C + ELF +M + P+ VT +LI+G
Sbjct: 341 YSKKG-CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 468 -------------YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
Y + G ++A +FK +++VA W S+I G G +A+
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKT-----ATEKDVALWTSMITGLAFHGNGQQAL 454
Query: 515 QIFRRMQFFQIAPNSVTVLSILPA 538
Q+F RMQ + PN+VT+L++L A
Sbjct: 455 QLFGRMQEEGVTPNNVTLLAVLTA 478
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 212/444 (47%), Gaps = 54/444 (12%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
++SM K G +S A +F+ ++E ++++++++I A + + E V++F M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 182 FLPDEFLLPKILQACGKCGDL--ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P IL GK G + L+ + G+ N+++ +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMK-SDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 240 AKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
A ++F+ M D VT+NA++ + ++ ++A K + M G P +VT+N LI+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
+Y + G D A++L +M G PDV+T+++++SGF + G+ A+ + +M +G +P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
N + T N+ I MY G +IF
Sbjct: 418 N-----------------------------------ICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 416 DMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
D + D+ +WNT++ + G + +F +M+ + P T+N LI+ Y +
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G+ +QA+ +++R+ D + +++++N+++A + G +++ ++ M+ + PN +T
Sbjct: 503 GSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 532 VLSILPAFANLVAGKKVKEIHCCA 555
S+L A+AN GK++ +H A
Sbjct: 562 YCSLLHAYAN---GKEIGLMHSLA 582
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 231/502 (46%), Gaps = 42/502 (8%)
Query: 66 PLSDAVAILDSLAEQGSKVRPITYMNLLQSC----IDRDCIEVGRELHARIGLVGNVNPF 121
P + ++++ + G TY L+ C + ++ +V E+ A G + +
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGF--SYDKV 315
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
L+ +Y K EA KV +EM ++ T++++I A +R+ +E ++L M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 178 VRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEM 237
G PD F +L + G +E+ I G +I N+ + +Y G+
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 238 GFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
K+F ++ D VTWN ++ F QNG + F M+ G P T+N L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
I++Y++ G + A+ + R+M G+TPD+ T++++++ + G + +L +M
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG---------NSLIDMYSK 404
+PN +T IG+ SL ++V +G +L+ + SK
Sbjct: 556 KPNELTYCSLLHAYANGKE---------IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 405 CGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
C L A+R F + ER D+ + N+++ Y KA + M++ P++ T
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 461 WNALITGYMQSGAED--QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
+N+L+ YM S + D ++ ++ + I G IK ++ S+N++I + ++ + A +IF
Sbjct: 667 YNSLM--YMHSRSADFGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 519 RMQFFQIAPNSVTVLSILPAFA 540
M+ I P+ +T + + ++A
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYA 745
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 203/468 (43%), Gaps = 59/468 (12%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI---GLVGNVNP 120
+G L +A+ + + +AE+G+K TY LL +E + + G N+
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYD 176
F + MY G +E K+FDE+ ++ TW+ ++ + EV +F +
Sbjct: 422 F--NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M R GF+P+ ++ A +CG E ++ + G+ + N+++A A+ G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 237 MGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
++K+ M++ + +T+ +++ + +I + + +EP V
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 293 LIASYNQLGRCDIAVDLMR---KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
L+ +CD+ + R +++ G +PD+ T +SM+S + ++ A +L M
Sbjct: 600 LVLV---CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
G P+ + T NSL+ M+S+ D
Sbjct: 657 ERGFTPS-----------------------------------MATYNSLMYMHSRSADFG 681
Query: 410 AAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
++ I + + D+ S+NT+I YC A +F +M++S P+V+T+N I
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
Y ++A+ + + + K G + N ++NS++ G+ + +KD+A
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHG-CRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 52/409 (12%)
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFD-AMQEEGVEPGL--VTWNILIASYNQL 300
FK E S A + G + + A + FD M+++ + L I+I+ +
Sbjct: 127 FKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKE 186
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
GR A ++ ++ G + DVY+++S+IS F GR A+++ +KM G +P IT
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMS---LVDDVLTGNSLI------------------ 399
+I + KM + D T N+LI
Sbjct: 247 --NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 400 -----------------DMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGF 438
D+Y K + A ++ + M + + ++N++I Y G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+A EL +M + + P+V T+ L++G+ ++G + A+ +F+ + G K N+ ++N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFN 423
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
+ I + G+ + M+IF + ++P+ VT ++L F +V + R
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 559 NLVSEISVSNILIDSYAKSGNLMYS----RRIFDGLPLKDIISWNIMLS 603
V E N LI +Y++ G+ + RR+ D D+ ++N +L+
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 220/519 (42%), Gaps = 79/519 (15%)
Query: 105 GRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
++LHA+ +++ + ++S+Y+ L EA +F ++ + W ++I + +
Sbjct: 24 AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
+ + + F +M G PD + P +L++C DL G +H +R GM +
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 225 NSIMAVYAKCGEMGF------------------------------------AKKLFKSMD 248
N++M +YAK MG +++F+ M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
+D V++N II G+ Q+G E A + M ++P T + ++ +++ VD
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY------VD 257
Query: 309 LMRKMESFG------LTPDVY-------------------------------TWSSMISG 331
+++ E G + DVY +W+S+++G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ Q GR AL L R+M+ + V+P ++ ++HG ++ +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
+ ++L+DMYSKCG+++AA++IFD M D SW II G+ G +A LF +M+
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
PN V + A++T G D+A F + K + + + + ++ ++G+ +
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 512 KAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+A +M T+LS NL +KV E
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 66/350 (18%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
+P V W S+I FT + AL +M SG P+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSK-----------------------CGD-------- 407
+HG V++ + D+ TGN+L++MY+K GD
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 408 -----LEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
+++ +R+F++M +DV S+NTII GY +G A + +M +D P+ T +
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 463 AL---------------ITGYMQSGAEDQ-------ALDLFK---RIEKDGKIK-----R 492
++ I GY+ D +D++ RIE ++ R
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIH 552
+ SWNSL+AG++Q+G+ ++A+++FR+M ++ P +V S++PA A+L K++H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
LR S I +++ L+D Y+K GN+ +R+IFD + + D +SW ++
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 229/485 (47%), Gaps = 15/485 (3%)
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEVVDL 173
+N + +V+ K G + + +++E+ ++ T++ +I A S + EE +L
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
M GF P + ++ K G E + + + +R G+ S++ K
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 234 CGEMGFAKKLFKSMDERDSVT----WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G++ +K+F M RD V ++++++ F ++G++++A YF++++E G+ P V
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+ ILI Y + G +A++L +M G DV T+++++ G ++ A L +M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
+ P+S T+ E+ + + DV+T N+L+D + K GD++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 410 AAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
A+ I+ M +++ S++ ++ C G +A+ ++ +M + P V+ N++I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ- 524
GY +SG +++ +G + + S+N+LI GF++ KA + ++M+ Q
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVP-DCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 525 -IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+ P+ T SIL F K+ + + + R + + S +I+ + NL +
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 584 RRIFD 588
RI D
Sbjct: 712 FRIHD 716
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 202/435 (46%), Gaps = 50/435 (11%)
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQA 271
G SI N+++ + G + A +++ + + T N ++ C++G +E+
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ +QE+GV P +VT+N LI++Y+ G + A +LM M G +P VYT++++I+G
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ G+ A ++ +ML SG+ P+S T ++ +V D
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYER------------------------------ 421
++ +S++ ++++ G+L+ A F+ + E
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 422 ---------DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
DV ++NTI+ G C G+A +LF +M + P+ T LI G+ + G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
A++LF+++ K+ +I+ +V ++N+L+ GF + G D A +I+ M +I P ++
Sbjct: 495 NLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL-----MYSRRIF 587
++ A + + + + +N+ + + N +I Y +SGN + I
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 588 DGLPLKDIISWNIML 602
+G + D IS+N ++
Sbjct: 614 EGF-VPDCISYNTLI 627
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 222/519 (42%), Gaps = 49/519 (9%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
++ +N LC +G + L + E+G +TY
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY------------------------ 273
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEE 169
L+S YS G + EA ++ + M + ++T++ +I + +E
Sbjct: 274 ----------NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 170 VVDLFYDMVRHGFLPDEFLLPKIL-QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
++F +M+R G PD +L +AC K +ET ++ + R + + +S+M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD-VVPDLVCFSSMM 382
Query: 229 AVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+++ + G + A F S+ E D+V + +I G+C+ G I A + M ++G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
+VT+N ++ + A L +M L PD YT + +I G + G +A++L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+KM + + +T EI V ++ ++ + L++
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 405 CGDLEAAQRIFDMMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
G L A R++D M ++ V N++I GYC +G KM P+ ++
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKD-GKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
+N LI G+++ +A L K++E++ G + +V ++NS++ GF + Q +A + R+
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
M + P+ T ++ F + + IH L+R
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 138/306 (45%), Gaps = 11/306 (3%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI-EVGRELHARIGLVGNVNP 120
C G +S A+ + + + +QG + +TY +L R + E + + +
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYD 176
+ T L+ + K G+L A ++F +M+E+ ++ T++ ++ + + +++ D
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
MV LP ++ A G L + I + ++ + NS++ Y + G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 237 MG----FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE--GVEPGLVTW 290
F +K+ D +++N +I GF + ++ +A M+EE G+ P + T+
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N ++ + + + A ++RKM G+ PD T++ MI+GF + A + +ML
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 351 SGVEPN 356
G P+
Sbjct: 721 RGFSPD 726
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 90/203 (44%), Gaps = 5/203 (2%)
Query: 398 LIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
LI Y + L A F ++ + + + N +IG G+ A+ ++ ++ S
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
NV T N ++ + G ++ ++++ G + ++ ++N+LI+ + G ++A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-VYPDIVTYNTLISAYSSKGLMEEA 289
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
++ M +P T +++ ++ KE+ LR L + + L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 574 YAKSGNLMYSRRIFDGLPLKDII 596
K G+++ + ++F + +D++
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVV 372
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/558 (22%), Positives = 237/558 (42%), Gaps = 79/558 (14%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
N ++S + K G +S AR +FD M +R + TW+ ++G +R ++E LF M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 179 RHG--FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS--IRVNNSIMAVYAKC 234
R LPD +L C +H+ A++ G ++ + V+N ++ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 235 GEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
+ A LF+ + E+DSVT+N +ITG+ ++G ++ F M++ G +P T++ ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 295 ASY---------NQLGRCDIAVDLMRK-----------------MES---FGLTP--DVY 323
+ QL + R +E+ F P D
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
+++ +IS ++Q + +L R+M G + + ++H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 384 VKMSLVDDVL-TGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
+ ++ D +L GNSL+DMY+KC E A+ IF + +R SW +I GY G G
Sbjct: 378 L-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 443 YELFMKMQDSD-----------------------------------SPPNVVTWNALITG 467
+LF KM+ S+ + NV + + L+
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
Y + G+ A+ +F+ + RN SWN+LI+ +G + A+ F +M + P
Sbjct: 497 YAKCGSIKDAVQVFEEMP-----DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 528 NSVTVLSILPAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
+SV++L +L A ++ + + + + + ++D ++G + ++
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL 611
Query: 587 FDGLPLK-DIISWNIMLS 603
D +P + D I W+ +L+
Sbjct: 612 MDEMPFEPDEIMWSSVLN 629
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/555 (23%), Positives = 240/555 (43%), Gaps = 47/555 (8%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHA-RIGLVGNVNP 120
N +A + + S P +T+ LL C D ++HA + L + NP
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 121 F--VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
F V L+ Y + L A +F+E+ E++ T++ +I ++ + E + LF M
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
+ G P +F +L+A D G+ +H++++ G V N I+ Y+K +
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA--- 295
+ LF M E D V++N +I+ + Q E + +F MQ G + + +++
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA 362
Query: 296 --SYNQLGR---C--------------DIAVDLMRKMESFGLTPDVY---------TWSS 327
S Q+GR C + VD+ K E F ++ +W++
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTA 422
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+ISG+ QKG L L KM S + + T ++H ++
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
+++V +G+ L+DMY+KCG ++ A ++F+ M +R+ SWN +I + G A F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
KM +S P+ V+ ++T G +Q + F+ + I + ++ ++
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA----NLVAGKKVKEIHCCALRRNLVSE 563
G+ +A ++ M F P+ + S+L A +A + +++ R+ +
Sbjct: 603 GRFAEAEKLMDEMPF---EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 564 ISVSNILIDSYAKSG 578
+S+SNI YA +G
Sbjct: 660 VSMSNI----YAAAG 670
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 191/432 (44%), Gaps = 73/432 (16%)
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
R + + I+ G + +N I+ + G++ A+K++ M +++V+ N +I+G +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM--ESFGLTPDVY 323
GD+ AR FDAM + V VTW IL+ Y + D A L R+M S PD
Sbjct: 93 GDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
T+++++ G V N++ ++H
Sbjct: 149 TFTTLLPGCND-----------------AVPQNAV------------------GQVHAFA 173
Query: 384 VKMSL-VDDVLT-GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
VK+ + LT N L+ Y + L+ A +F+ + E+D ++NT+I GY G +
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 442 AYELFMKMQDSDSPPNVVTWNALI---------------------TGYMQSGA-EDQALD 479
+ LF+KM+ S P+ T++ ++ TG+ + + +Q LD
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD 293
Query: 480 LFKRIEK--------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
+ + ++ D + + S+N +I+ + Q+ Q + ++ FR MQ +
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
++L ANL + + +++HC AL S + V N L+D YAK + IF LP
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 592 LKDIISWNIMLS 603
+ +SW ++S
Sbjct: 414 QRTTVSWTALIS 425
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 12/354 (3%)
Query: 81 GSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF--VETKLVSMYSKCGHLSE 138
G R + +L + +++GR+LH + L+ + V LV MY+KC E
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQMGRQLHCQ-ALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
A +F + +R +W+A+I ++ + LF M D+ +L+A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
L G+ +H+ IR G ++ + ++ +YAKCG + A ++F+ M +R++V+WNA+
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FG 317
I+ NGD E A F M E G++P V+ ++ + + G + + + M +G
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 318 LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
+TP ++ M+ + GR A L+ +M EP+ I
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF---EPDEIMWSSVLNACRIHKNQSLAE 641
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV-----YSW 426
M + D S+ ++Y+ G+ E + + M ER + YSW
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 204/477 (42%), Gaps = 52/477 (10%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
+G ++++ + + + G + T+ +L++ + +G++LHA G + + V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+++ YSK + E R +FDEM E + +++ +I + S+ +E + F +M GF
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
F +L L+ GR +H A+ S + V NS++ +YAKC A+
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI---ASYNQ 299
+FKS+ +R +V+W A+I+G+ Q G K F M+ + T+ ++ AS+
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 300 --LGRCDIA-----------------VDLMRK-------MESFGLTPD--VYTWSSMISG 331
LG+ A VD+ K ++ F PD +W+++IS
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-------IHGIGV 384
G A+ KM+ SG++P+S+++ E I+GI
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGG---YCHAGFCG 440
K ++D+ + G A+++ D M +E D W++++ + +
Sbjct: 588 KKKHY------ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
+A E M+ V+ + + Y +G ++ D+ K + + G K SW
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNI---YAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 211/456 (46%), Gaps = 51/456 (11%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSM------YSKCGHL-SEARKV 142
+ LLQSC +++ R L+ +V FV ++L+++ ++K +L A +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDV--FVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 143 FDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDL 202
F +++ NLF ++ +I S + + M++ PD P +++A + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 203 ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
G HS +R G + + V NS++ +YA CG + A ++F M RD V+W +++ G+
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 263 CQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDV 322
C+ G +E AR+ FD M L TW+I+I Y + + A+DL M+ G+ +
Sbjct: 194 CKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
S+IS G AL+ + +
Sbjct: 250 TVMVSVISSCAHLG----ALEFGERA-------------------------------YEY 274
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
VK + +++ G +L+DM+ +CGD+E A +F+ + E D SW++II G G KA
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
F +M P VT+ A+++ G ++ L++++ ++KD I+ + + ++
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++G+ +A +M + PN+ + ++L A
Sbjct: 395 MLGRAGKLAEAENFILKM---HVKPNAPILGALLGA 427
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 38/311 (12%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-FVETKLVSMYS------- 131
S++ P IT+ L+++ + +C+ VG + H++I G N +VE LV MY+
Sbjct: 111 SRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAA 170
Query: 132 ------------------------KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
KCG + AR++FDEM RNLFTWS MI ++ +
Sbjct: 171 AGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCF 230
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
E+ +DLF M R G + +E ++ ++ +C G LE G + ++ M ++ + ++
Sbjct: 231 EKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTAL 290
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
+ ++ +CG++ A +F+ + E DS++W++II G +G +A YF M G P
Sbjct: 291 VDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD 350
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
VT+ ++++ + G + +++ M+ G+ P + + ++ + G+ A + +
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFIL 410
Query: 347 KMLLSGVEPNS 357
KM V+PN+
Sbjct: 411 KM---HVKPNA 418
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 81/391 (20%)
Query: 187 FLLPKI--LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK-------CGEM 237
F PK+ LQ+C DL ++IH +R + S + V + ++A+ +
Sbjct: 11 FKHPKLALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL 67
Query: 238 GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
G+A +F + + +N +I F + +A ++ M + + P +T+ LI +
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
+++ + ++ FG DVY +S++ + G A + +M
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM--------- 178
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
G + DV++ S++ Y KCG +E A+ +FD
Sbjct: 179 -------------------------GFR-----DVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 418 MYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED-- 475
M R++++W+ +I GY KA +LF M+ N ++I+ GA +
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 476 --------------------QALDLFKR---IEK-----DGKIKRNVASWNSLIAGFLQS 507
+D+F R IEK +G + + SW+S+I G
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
G KAM F +M P VT ++L A
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
P+++ ++ +I F+ A +ML S + P++IT
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS----------- 127
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
S ++ VL G + +I ++ DVY N+++ Y + GF
Sbjct: 128 --------SEMECVLVGE------------QTHSQIVRFGFQNDVYVENSLVHMYANCGF 167
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
A +F +M D VV+W +++ GY + G + A ++F D RN+ +W+
Sbjct: 168 IAAAGRIFGQMGFRD----VVSWTSMVAGYCKCGMVENAREMF-----DEMPHRNLFTWS 218
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
+I G+ ++ +KA+ +F M+ + N ++S++ + A+L A + + + ++
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
++ + + L+D + + G++ + +F+GLP D +SW+
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG-RELHARIGLVG 116
+N N A+ + + + +G ++++ SC +E G R +
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYD 176
VN + T LV M+ +CG + +A VF+ + E + +WS++I + + + F
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQ 340
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIH-SVAIRHGMCSSIRVNNSIMAVYAKCG 235
M+ GF+P + +L AC G +E G I+ ++ HG+ + I+ + + G
Sbjct: 341 MISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAG 400
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
++ A+ M + + + G C+
Sbjct: 401 KLAEAENFILKMHVKPNAPILGALLGACK 429
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 212/485 (43%), Gaps = 71/485 (14%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-FVETKLVSMYSKCGHLS--EARKVFD 144
T++ +L +C+ +G ++H I G +N FV L+S+Y K S + K+FD
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFD 242
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEFLLPKILQACGKCGDLE 203
E+ +R++ +W+ ++ + +E + DLFY+M R GF D F L +L +C L
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 204 TGRLIHSVAIRHGMCSSIRVNNSIMAVYAK--------------------------CGEM 237
GR +H AIR G+ + VNN+++ Y+K M
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 238 GF-----AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP------- 285
F A ++F ++ E++++T+NA++ GFC+NG +A K F M + GVE
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTS 422
Query: 286 -----GLVTWN--------------------ILIASYNQLGRCDIAVDLMRKMESFGLTP 320
GLV+ I A + RC+ D + +
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 321 D-VYTWSSMISGFTQKGRTYHALDLLRKMLLS-GVEPNSITVXXXXXXXXXXXXXXXXXE 378
D +S+I G+ + G A+ L + L + + +++ +
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IH +K D+ GNSLI MY+KC D + A +IF+ M E DV SWN++I Y
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITG--YMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
+A L+ +M + + P+++T +I+ Y +S DLF ++ I+
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 497 WNSLI 501
+ + +
Sbjct: 663 YTAFV 667
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 150/305 (49%), Gaps = 15/305 (4%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+A + C NG A+ + + ++G ++ + + + +C +V ++H
Sbjct: 386 NALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIK 445
Query: 115 VGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSA---MIGACSREKSWEEV 170
G NP ++T L+ M ++C +++A ++FD+ NL + A +IG +R ++
Sbjct: 446 FGTAFNPCIQTALLDMCTRCERMADAEEMFDQW-PSNLDSSKATTSIIGGYARNGLPDKA 504
Query: 171 VDLFY-DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
V LF+ + DE L IL CG G E G IH A++ G S I + NS+++
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 230 VYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
+YAKC + A K+F +M E D ++WN++I+ + + ++A + M E+ ++P ++T
Sbjct: 565 MYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIIT 624
Query: 290 WNILIASY-----NQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALD 343
++I+++ N+L C DL M++ + + P +++ + G A D
Sbjct: 625 LTLVISAFRYTESNKLSSCR---DLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAED 681
Query: 344 LLRKM 348
+ M
Sbjct: 682 TINSM 686
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 216/511 (42%), Gaps = 100/511 (19%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+L+ + D+E + +H+ ++ R+ N++++ Y K G A +F S+
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 252 SVTWNAIITGFCQ-NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD-- 308
V++ A+I+GF + N +IE + +F + V+P T+ ++ + ++ R + +
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 309 -LMRK----------------------------MESFGLTP--DVYTWSSMISGFTQKGR 337
L+ K ++ F P DV +W++++S ++G+
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGK 264
Query: 338 TYHALDLLRKM-LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
++ A DL +M + G +S T+ E+HG +++ L+ ++ N
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 397 SLIDMYSKCGDLEAAQRIFDMMY-------------------------------ERDVYS 425
+LI YSK D++ + +++MM E++ +
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSD------SPPNVVTWNALIT---------GY-M 469
+N ++ G+C G KA +LF M S + V L++ G+ +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 470 QSGA------EDQALDLFKRIEKDGKIKRNVASW----------NSLIAGFLQSGQKDKA 513
+ G + LD+ R E+ + W S+I G+ ++G DKA
Sbjct: 445 KFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKA 504
Query: 514 MQIFRRMQFFQ-IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
+ +F R Q + + V++ IL L + +IHC AL+ S+IS+ N LI
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
YAK + + +IF+ + D+ISWN ++S
Sbjct: 565 MYAKCCDSDDAIKIFNTMREHDVISWNSLIS 595
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 78/353 (22%)
Query: 80 QGSKVRPITYMNLLQSCIDRDCIEVGRELHAR---IGL----------VGNVNPF----- 121
+G V T LL SC D + GRELH R IGL +G + F
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 122 VE--------------TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW 167
VE T++++ Y G + A ++F + E+N T++A++ R
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+ + LF DM++ G +F L + ACG + + IH I+ G + + ++
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 228 MAVYAKCGEMGFAKKLF----KSMDERDSVTWNAIITGFCQNGDIEQARKYFD------- 276
+ + +C M A+++F ++D + T +II G+ +NG ++A F
Sbjct: 459 LDMCTRCERMADAEEMFDQWPSNLDSSKATT--SIIGGYARNGLPDKAVSLFHRTLCEQK 516
Query: 277 ------------------AMQEEGVE-----------PGLVTWNILIASYNQLGRCDIAV 307
+E G + + N LI+ Y + D A+
Sbjct: 517 LFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAI 576
Query: 308 DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
+ M DV +W+S+IS + + AL L +M ++P+ IT+
Sbjct: 577 KIFNTMREH----DVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITL 625
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 97/373 (26%)
Query: 247 MDERDSVTWNAIITGF-------CQNGDIEQARKY---FDAMQEEGVEPGLVTWNILIAS 296
D+ ++ ++I GF Q D+E + F ++EE G N LI++
Sbjct: 68 FDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLG----NALIST 123
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEP 355
Y +LG A+ + + S P V +++++ISGF++ AL + +M +G V+P
Sbjct: 124 YLKLGFPREAILVFVSLSS----PTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK-----CGDLEA 410
N T +IHG+ VK ++ V NSL+ +Y K C D+
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV-- 237
Query: 411 AQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
++FD + +RDV S WN +++ ++
Sbjct: 238 -LKLFDEIPQRDVAS-----------------------------------WNTVVSSLVK 261
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
G +A DLF + + + GF +S
Sbjct: 262 EGKSHKAFDLFYEMNR--------------VEGF---------------------GVDSF 286
Query: 531 TVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
T+ ++L + + + +E+H A+R L+ E+SV+N LI Y+K ++ +++ +
Sbjct: 287 TLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
Query: 591 PLKDIISWNIMLS 603
+D +++ M++
Sbjct: 347 MAQDAVTFTEMIT 359
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 247/557 (44%), Gaps = 40/557 (7%)
Query: 45 IRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITY----MNLLQSCIDRD 100
++S P P + + N+L S + ++ SL E+ +R I+Y N+L +C R
Sbjct: 72 VQSRPLPSIV--EFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILINCFCRR 128
Query: 101 CIEVGRELHARIGLVGNV-----NPFVET--KLVSMYSKCGHLSEARKVFDEM----RER 149
+L + ++G + P + T L++ Y +SEA + D+M +
Sbjct: 129 -----SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
N T++ +I E V L MV G PD F ++ K GD++ +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQN 265
+ + + + + +I+ + A LF MD + + VT+N++I C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G A + M E + P +VT++ LI ++ + G+ A L +M + PD++T+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
SS+I+GF R A + M+ PN +T E+ +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGK 441
LV + +T N+LI + GD + AQ+IF M D+ +++ ++ G C G K
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A +F +Q S P++ T+N +I G ++G + DLF + G +K NV + ++I
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMI 542
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKK------VKEIHCCA 555
+GF + G K++A +FR M+ PNS T +++ A L G K +KE+ C
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR--ARLRDGDKAASAELIKEMRSCG 600
Query: 556 LRRNLVSEISVSNILID 572
+ + V N+L D
Sbjct: 601 FVGDASTISMVINMLHD 617
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 210/462 (45%), Gaps = 40/462 (8%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
+L++++ +I R + + M++ G+ PD L +L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL---------------- 157
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
+G C R++ ++ V ++F + ++VT+N +I G +
Sbjct: 158 -----NGYCHGKRISEAVALV----------DQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
+A D M G +P L T+ ++ + G D+A+ L++KME + DV ++++I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
AL+L +M G+ PN +T + ++ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYEL 445
+V+T ++LID + K G L A++++D M +R D+++++++I G+C +A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F M D PNVVT+N LI G+ ++ ++ ++LF+ + + G + N ++N+LI G
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLF 441
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEIS 565
Q+G D A +IF++M + P+ +T +L +K + + + +I
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 566 VSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
NI+I+ K+G + +F L LK ++I + M+S
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 170/365 (46%), Gaps = 14/365 (3%)
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
S D R+ ++ N ++ + ++ A F M + P +V +N L+++ ++ + D+
Sbjct: 44 SYDYREKLSRNVLL-----DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL 98
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
+ L +M++ ++ D+Y+++ +I+ F ++ + AL +L KM+ G EP+ +T+
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 158
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER---- 421
+ M + +T N+LI A + D M R
Sbjct: 159 GYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 218
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
D++++ T++ G C G A L KM+ +VV + +I + AL+LF
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
++ G I+ NV ++NSLI G+ A ++ M +I PN VT +++ AF
Sbjct: 279 TEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKD----IIS 597
+ ++++ ++R++ +I + LI+ + L ++ +F+ + KD +++
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 598 WNIML 602
+N ++
Sbjct: 398 YNTLI 402
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 219/455 (48%), Gaps = 34/455 (7%)
Query: 37 NSNYVSMSI-RSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQG-SKVRPITYMNLLQ 94
N+ + S+S + P P ++ Q L + L++ A++G S P + +LL+
Sbjct: 41 NNGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLE 100
Query: 95 SCIDRDCIEVGRELHARIG--LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL- 151
+C I+ G +H I L+ N N + +KLV +Y+ CG+ A +VFD M +R+
Sbjct: 101 TCYSLRAIDHGVRVHHLIPPYLLRN-NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSS 159
Query: 152 -FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHS 210
F W+++I + +E+ + L++ M G PD F P++L+ACG G ++ G IH
Sbjct: 160 PFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHR 219
Query: 211 VAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQ 270
++ G + V N+++ +YAKCG++ A+ +F + +D V+WN+++TG+ +G + +
Sbjct: 220 DLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHE 279
Query: 271 ARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF----GLTPDVYTWS 326
A F M + G+EP V + ++A ++ R++ + G+ ++ +
Sbjct: 280 ALDIFRLMVQNGIEPDKVAISSVLARV-------LSFKHGRQLHGWVIRRGMEWELSVAN 332
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVK 385
++I ++++G+ A + +ML E ++++ E +H K
Sbjct: 333 ALIVLYSKRGQLGQACFIFDQML----ERDTVSWNAIISAHSKNSNGLKYFEQMHRANAK 388
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-----DVYSWNTIIGGYCHAGFCG 440
D +T S++ + + G +E +R+F +M + + + ++ Y AG
Sbjct: 389 ----PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+AY + ++ ++ P V W AL+ G D
Sbjct: 445 EAYSMIVQEMGLEAGPTV--WGALLYACYLHGNTD 477
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 50/266 (18%)
Query: 380 HGIGVKMSLVDDVLTGN-----SLIDMYSKCGDLEAAQRIFDMMYERDV--YSWNTIIGG 432
HG+ V + +L N L+ +Y+ CG E A +FD M +RD ++WN++I G
Sbjct: 110 HGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISG 169
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTW------------------------------- 461
Y G A L+ +M + P+ T+
Sbjct: 170 YAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYD 229
Query: 462 ----NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
NAL+ Y + G +A ++F I ++ SWNS++ G+L G +A+ IF
Sbjct: 230 VYVLNALVVMYAKCGDIVKARNVFDMIPH-----KDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKS 577
R M I P+ V + S+L A +++ K +++H +RR + E+SV+N LI Y+K
Sbjct: 285 RLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKR 341
Query: 578 GNLMYSRRIFDGLPLKDIISWNIMLS 603
G L + IFD + +D +SWN ++S
Sbjct: 342 GQLGQACFIFDQMLERDTVSWNAIIS 367
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 47/296 (15%)
Query: 283 VEPGLVTWNILIAS-----YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
+ P L+ N+ I+S Y G ++A ++ +M +P + W+S+ISG+ + G+
Sbjct: 118 IPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQ 175
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
A+ L +M GV+P+ T IH VK DV N+
Sbjct: 176 YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNA 235
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
L+ MY+KCGD+ A+ +FDM+ +D SWN+++ GY H G +A ++F M + P+
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 458 VVT-------------------W-------------NALITGYMQSGAEDQALDLFKRIE 485
V W NALI Y + G QA +F
Sbjct: 296 KVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIF---- 351
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
D ++R+ SWN++I+ + ++ F +M P+ +T +S+L AN
Sbjct: 352 -DQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 208/470 (44%), Gaps = 74/470 (15%)
Query: 86 PITYMNLLQSCIDRDCIEVGRELHARIGLVGN-----------VNPFVE----------- 123
IT +L++C + + ++ G+++HA+I L+G VN + +
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQI-LIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 124 -----------TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
+ L+S Y+ CG ++E+R +FD R + W++MI E +
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
LF +M R+ D L ++ AC G LETG+ +H A + G+ I V ++++ +Y+
Sbjct: 306 LFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
KCG A KLF ++ D++ N++I + G I+ A++ F+ ++ + L++WN
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENK----SLISWN- 419
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
SM +GF+Q G T L+ +M
Sbjct: 420 ----------------------------------SMTNGFSQNGCTVETLEYFHQMHKLD 445
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
+ + +++ ++ + L D + +SLID+Y KCG +E +
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
R+FD M + D WN++I GY G +A +LF KM + P +T+ ++T G
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCG 565
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
++ LF+ ++ D + ++ ++ ++G ++A+ + M F
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 214/478 (44%), Gaps = 83/478 (17%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
+VS ++K G LS AR++F+ M E+++ T ++++ EE + LF ++ F D
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSAD 186
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
L +L+AC + L+ G+ IH+ + G+ ++N+S++ VYAKCG++ A + +
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
+ E D + +A+I+G+ G + ++R FD + RC
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFD---------------------RKSNRC-- 283
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXX 365
V W+SMISG+ AL L +M + +S T+
Sbjct: 284 ----------------VILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVIN 326
Query: 366 XXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS 425
++H K L+DD++ ++L+DMYSKCG A ++F + D
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
N++I Y G A +F ++++ ++++WN++ G+ Q+G + L+ F ++
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIEN----KSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
K + + V++ S++ A A++ +
Sbjct: 443 K------------------------------------LDLPTDEVSLSSVISACASISSL 466
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ +++ A L S+ VS+ LID Y K G + + RR+FD + D + WN M+S
Sbjct: 467 ELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIR-VNNSIMAVYAKCGEMGFAKKLFKSMDE 249
++LQ+C R + + ++ G SSI V N ++ +Y++ G+MG A+ LF M +
Sbjct: 31 RLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD 90
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
R+ +WN +I G+ +G+ + ++FD M E +WN++++ + + G +A L
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDG----YSWNVVVSGFAKAGELSVARRL 146
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
M DV T +S++ G+ G AL L +++ S ++IT+
Sbjct: 147 FNAMPE----KDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAE 199
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTI 429
+IH + + D +SL+++Y+KCGDL A + + + E D +S + +
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGK 489
I GY + G ++ LF D S V+ WN++I+GY+ + + +AL LF + + +
Sbjct: 260 ISGYANCGRVNESRGLF----DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR 315
Query: 490 -IKRNVAS-WNSLIA-GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
R +A+ N+ I GFL++G
Sbjct: 316 EDSRTLAAVINACIGLGFLETG-------------------------------------- 337
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
K++HC A + L+ +I V++ L+D Y+K G+ M + ++F + D I N M+
Sbjct: 338 --KQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 120/213 (56%), Gaps = 14/213 (6%)
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
V+ N L+ MYS+ G + A+ +FD M +R+ +SWNT+I GY ++G G + F M +
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRI-EKDGKIKRNVASWNSLIAGFLQSGQK 510
D +WN +++G+ ++G A LF + EKD V + NSL+ G++ +G
Sbjct: 122 RDG----YSWNVVVSGFAKAGELSVARRLFNAMPEKD------VVTLNSLLHGYILNGYA 171
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
++A+++F+ + F + +++T+ ++L A A L A K K+IH L + + +++ L
Sbjct: 172 EEALRLFKELNF---SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
++ YAK G+L + + + + D S + ++S
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
++ N NG + + + + ++ +++ +C +E+G ++ AR +
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 115 VG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
VG + + V + L+ +Y KCG + R+VFD M + + W++MI + E +DL
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYA 232
F M G P + +L AC CG +E GR L S+ + HG + ++ + A
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 233 KCGEMGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+ G + A L + M + D W++I+ G NG +K + + E +EP
Sbjct: 599 RAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE--LEP 650
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 52/475 (10%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
P + KL Y+ G + + +F + + +LF ++A I S ++ L+ ++
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P+EF +L++C ++G+LIH+ ++ G+ V ++ VYAK G++
Sbjct: 124 SEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A+K+F M ER V+ A+IT + + G++E AR FD+M E + V+WN++I Y Q
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI----VSWNVMIDGYAQ 235
Query: 300 LGRCDIAVDLMRKMESFGL-TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
G + A+ L +K+ + G PD T + +S +Q G AL+ R
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG----ALETGR------------ 279
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLIDMYSKCGDLEAAQRIFDM 417
IH + VK S + +V LIDMYSKCG LE A +F+
Sbjct: 280 -------------------WIH-VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 418 MYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD-SDSPPNVVTWNALITGYMQSGAEDQ 476
+D+ +WN +I GY G+ A LF +MQ + P +T+ + +G ++
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
+ +F+ + ++ IK + + L++ ++GQ +A + + M + +VL
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 537 PAFANLVAGKKVKEIHCCALRRN-----LVSEISVSNILIDSYAKSGNLMYSRRI 586
+ V GK++ E +N L+S I S + AK NLM + I
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 51/407 (12%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A +N NG A + L T+ +LL+SC + G+ +H +
Sbjct: 100 AAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKF 155
Query: 116 G-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF 174
G ++P+V T LV +Y+K G + A+KVFD M ER+L + +AMI +++ + E LF
Sbjct: 156 GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 175 YDM---------------VRHGF-----------------LPDEFLLPKILQACGKCGDL 202
M +HGF PDE + L AC + G L
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 203 ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGF 262
ETGR IH + +++V ++ +Y+KCG + A +F +D V WNA+I G+
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 263 CQNGDIEQARKYFDAMQE-EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTP 320
+G + A + F+ MQ G++P +T+ + + G + + + M + +G+ P
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+ + ++S + G+ A + ++ M ++ +S+ EI
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 381 ----GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
G+ +K S + +L+ ++Y+ GD E ++ ++M E+ +
Sbjct: 453 EYLIGLNIKNSGIYVLLS-----NIYASVGDYEGVAKVRNLMKEKGI 494
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 43/286 (15%)
Query: 318 LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
+ PD++ +++ I+ + G A L ++L S + PN T
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL--- 147
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
IH +K L D L+D+Y+K GD+ +AQ++FD M ER + S +I Y G
Sbjct: 148 -IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A LF M + D +V+WN +I GY Q G + AL LF+++ +GK K
Sbjct: 207 NVEAARALFDSMCERD----IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK------ 256
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
P+ +TV++ L A + + A + + IH
Sbjct: 257 -----------------------------PDEITVVAALSACSQIGALETGRWIHVFVKS 287
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+ + V LID Y+K G+L + +F+ P KDI++WN M++
Sbjct: 288 SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 149/369 (40%), Gaps = 78/369 (21%)
Query: 208 IHSVAIRHGMCSSIR---VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
IH+ +RH + R +N + YA G++ + LF + D + A I
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
NG +QA + + + P T++ L+ S + I +++ FGL D Y
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLK----FGLGIDPYV 163
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+ ++ + + G A + +M
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRM-----------------------------------P 188
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYE 444
+ SLV + ++I Y+K G++EAA+ +FD M ERD+ SWN +I GY GF A
Sbjct: 189 ERSLV----SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 445 LFMKMQDSDSP-PNVVTWNALITGYMQSGAEDQA--LDLF---KRIEKDGKI-------- 490
LF K+ P P+ +T A ++ Q GA + + +F RI + K+
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 491 -----------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAPNSVTV 532
++++ +WN++IAG+ G A+++F MQ + P +T
Sbjct: 305 SKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF 364
Query: 533 LSILPAFAN 541
+ L A A+
Sbjct: 365 IGTLQACAH 373
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFL-----------QSGQKDKAMQIFRRMQFFQIA 526
L L + GKI+ ++A ++ I L +G KD+A ++ ++ +I
Sbjct: 68 LKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEIN 127
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
PN T S+L + + K K IH L+ L + V+ L+D YAK G+++ ++++
Sbjct: 128 PNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKV 183
Query: 587 FDGLPLKDIISWNIMLS 603
FD +P + ++S M++
Sbjct: 184 FDRMPERSLVSSTAMIT 200
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 228/501 (45%), Gaps = 62/501 (12%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
+KL+S +K + ++M+ NL+T+S +I R + + M++
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS------SIRVNNSIMAVYA- 232
G+ PD L +L G C R+ +V++ M S N I ++
Sbjct: 145 LGYEPDIVTLNSLLN--GFC---HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 233 -KCGE-MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
+ E + ++ + D VT+ ++ G C+ GDI+ A M++ +EPG+V +
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N +I + + A++L +M++ G+ P+V T++S+I GR A LL M+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
+ PN V+T ++LID + K G L
Sbjct: 320 RKINPN-----------------------------------VVTFSALIDAFVKEGKLVE 344
Query: 411 AQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
A++++D M +R D+++++++I G+C +A +F M D PNVVT+N LI
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
G+ ++ D+ ++LF+ + + G + N ++ +LI GF Q+ + D A +F++M +
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRI 586
P+ +T +L N + + R + +I NI+I+ K+G + +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 587 FDGLPLK----DIISWNIMLS 603
F L LK +++++ M+S
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMS 544
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 135/601 (22%), Positives = 260/601 (43%), Gaps = 37/601 (6%)
Query: 3 KCLIILPTKSRPPLSIPSYSASQFEF-------IASTRVHANSNYVSMSIRSLPYPKFMD 55
KC P+ S + +S ++++ + ++ N ++S P+P +
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIV- 82
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQ----GSKVRPITYMNLLQSCIDRDCIEVGRELHAR 111
+ ++L S + ++ SL EQ G TY L+ R + + + A+
Sbjct: 83 -EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 112 IGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREK 165
+ +G P + T L++ + +S+A + +M E FT++ +I R
Sbjct: 142 MMKLG-YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
E V L MV G PD ++ K GD++ + + + + + N
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+I+ + A LF MD + + VT+N++I C G A + M E
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
+ P +VT++ LI ++ + G+ A L +M + PD++T+SS+I+GF R A
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
+ M+ PN +T E+ + LV + +T +LI
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 402 YSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
+ + + + AQ +F M D+ +++ ++ G C+ G A +F +Q S P+
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+ T+N +I G ++G + DLF + G +K NV ++ ++++GF + G K++A +F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 518 RRMQFFQIAPNSVTVLSILPAFANLVAGKK------VKEIHCCALRRNLVSEISVSNILI 571
R M+ P+S T +++ A+L G K ++E+ C + + V+N+L
Sbjct: 560 REMKEEGPLPDSGTYNTLIR--AHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617
Query: 572 D 572
D
Sbjct: 618 D 618
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 214/474 (45%), Gaps = 17/474 (3%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+++ LN C +SDAV+++ + E G + T+ L+ + L R+
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM- 212
Query: 114 LVGNVNPFVETKLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
+V P + T + + C G + A + +M E + ++ +I A K+
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+ ++LF +M G P+ +++ G + S I + ++ +++
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G++ A+KL+ M +R D T++++I GFC + +++A+ F+ M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + R D ++L R+M GL + T++++I GF Q +A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV P+ +T + + + D+ T N +I+
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K G +E +F + + +V ++ T++ G+C G +A LF +M++ P+
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
T+N LI +++ G + + +L + + + AS L+ L G+ DK+
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVTNMLHDGRLDKS 624
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 211/464 (45%), Gaps = 21/464 (4%)
Query: 160 ACSREKSWEEVVD--------LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSV 211
C RE+ +VD LF +M+R LP + A +
Sbjct: 54 VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 212 AIRHGMCSSIRVNNSIMAVYAKCGEMGFA----KKLFKSMDERDSVTWNAIITGFCQNGD 267
+G+ +I N ++ + +C + FA K+ K E D+ T+N +I G G
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
+ +A D M E G +P +VT+N ++ + G +A+DL+RKME + DV+T+S+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I + G A+ L ++M G++ + +T + V
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAY 443
+V +V+T N L+D++ K G L+ A ++ M R ++ ++NT++ GYC +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
+ M + P++VT+ +LI GY D + +F+ I K G + N +++ L+ G
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA-NAVTYSILVQG 412
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
F QSG+ A ++F+ M + P+ +T +L + +K EI + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
I + +I+ K G + + +F LP K +++++ +M+S
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 194/469 (41%), Gaps = 82/469 (17%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET 124
G +S+AV ++D + E G + +TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTY----------------------------------N 197
Query: 125 KLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V+ + G S A + +M ERN+ FT+S +I + R+ + + LF +M
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G +++ K G G L+ + + ++ N ++ V+ K G++ A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 241 KKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+L+K M R + +T+N ++ G+C + +A D M P +VT+ LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
Y + R D + + R + GL + T+S ++ GF Q G+ A +L ++M+ GV P
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP- 436
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
DV+T L+D G LE A IF+
Sbjct: 437 ----------------------------------DVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 417 MMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
+ + + + TII G C G A+ LF + PNV+T+ +I+G + G
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
+ +A L +++E+DG N ++N+LI L+ G + ++ M+
Sbjct: 523 SLSEANILLRKMEEDGNAP-NDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 210/473 (44%), Gaps = 46/473 (9%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
N++T + MI R + +++ G+ PD +++ G + ++
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQN 265
+ +G + NSI+ + G+ A L + M+ER D T++ II C++
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G I+ A F M+ +G++ +VT+N L+ + G+ + L++ M S + P+V T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
+ ++ F ++G+ A +L ++M+ G+ PN IT + + V+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGK 441
D++T SLI Y ++ ++F + +R + +++ ++ G+C +G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKD-------------- 487
A ELF +M P+V+T+ L+ G +G ++AL++F+ ++K
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 488 -----GKI---------------KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
GK+ K NV ++ +I+G + G +A + R+M+ AP
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 528 NSVTVLSILPAF---ANLVAGKK-VKEIHCCALRRNLVSEISVSNILIDSYAK 576
N T +++ A +L A K ++E+ C + S V ++L+ + +
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 154/314 (49%), Gaps = 15/314 (4%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID----RDCIEVGRELHARIG 113
++ LC +G + A+++ + +G K +TY +L++ D + +++ +R
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-E 293
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEE 169
+V NV F L+ ++ K G L EA +++ EM R N+ T++ ++ + E
Sbjct: 294 IVPNVITF--NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
++ MVR+ PD +++ ++ G + + G+ ++ + ++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 230 VYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+ + G++ A++LF+ M D +T+ ++ G C NG +E+A + F+ +Q+ ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
G+V + +I + G+ + A +L + G+ P+V T++ MISG +KG A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 346 RKMLLSGVEPNSIT 359
RKM G PN T
Sbjct: 532 RKMEEDGNAPNDCT 545
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
LC G +D +L + + IT+ LL + ++ EL+ + + ++P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM-ITRGISP 331
Query: 121 FVET--KLVSMYSKCGHLSEARKVFDEM-RER---NLFTWSAMIGACSREKSWEEVVDLF 174
+ T L+ Y LSEA + D M R + ++ T++++I K ++ + +F
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
++ + G + + ++Q + G ++ + + HG+ + ++
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 235 GEMGFAKKLFKSMDERDS----VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G++ A ++F+ + + V + II G C+ G +E A F ++ +GV+P ++T+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
++I+ + G A L+RKME G P+ T++++I + G + L+ +M
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 351 SGVEPNSITV 360
G ++ ++
Sbjct: 572 CGFSADASSI 581
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 182/357 (50%), Gaps = 48/357 (13%)
Query: 38 SNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCI 97
+NYV +I LP ++QLCSNG L +A L +A G ++ Y LL +C+
Sbjct: 17 TNYVLQTI--LP--------ISQLCSNGRLQEA---LLEMAMLGPEMGFHGYDALLNACL 63
Query: 98 DRDCIEVGRELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWS 155
D+ + G+ +HA + + P ++ T+L+ Y KC L +ARKV DEM E+N+ +W+
Sbjct: 64 DKRALRDGQRVHAHM-IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
AMI S+ E + +F +M+R P+EF +L +C + L G+ IH + ++
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF 275
S I V +S++ +YAK G++ A+++F+ + ERD V+ AII G+ Q G E+A + F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD-----LMRKMESFGLTP----DVY--- 323
+ EG+ P VT+ L+ + + L D L R++ + + D+Y
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 324 -------------------TWSSMISGFTQKGRTYHALDLLRKML-LSGVEPNSITV 360
+W++M+ G+++ G L+L R M V+P+++T+
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 308 DLMRKME-SFGLTPDVYTWSSM--ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
+LMR + SF +P Y ++ IS GR AL +M + G E
Sbjct: 3 NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALL 59
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY 424
+H +K + L+ Y KC LE A+++ D M E++V
Sbjct: 60 NACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV 119
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS-----GAEDQAL- 478
SW +I Y G +A +F +M SD PN T+ ++T +++ G + L
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 479 -------------DLFKRIEKDGKIK-----------RNVASWNSLIAGFLQSGQKDKAM 514
L K G+IK R+V S ++IAG+ Q G ++A+
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
++F R+ ++PN VT S+L A + L K+ HC LRR L + N LID Y
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 575 AKSGNLMYSRRIFDGLPLKDIISWNIML 602
+K GNL Y+RR+FD +P + ISWN ML
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAML 327
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 157/363 (43%), Gaps = 35/363 (9%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+L AC L G+ +H+ I+ + + ++ Y KC + A+K+ M E++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG------------------------- 286
V+W A+I+ + Q G +A F M +P
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 287 -LVTWN----ILIASYNQLGRCDIAVDLMRKMESFGLTP--DVYTWSSMISGFTQKGRTY 339
+V WN I + S + L A + E F P DV + +++I+G+ Q G
Sbjct: 178 LIVKWNYDSHIFVGS-SLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
AL++ ++ G+ PN +T + H ++ L + NSLI
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS-PPNV 458
DMYSKCG+L A+R+FD M ER SWN ++ GY G + ELF M+D P+
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 459 VTWNALITGYMQSGAEDQALDLFK-RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
VT A+++G ED L++F + + K + ++ ++G+ D+A +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 518 RRM 520
+RM
Sbjct: 417 KRM 419
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 154/300 (51%), Gaps = 10/300 (3%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A +++ G S+A+ + + K T+ +L SCI + +G+++H GL+
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH---GLI 179
Query: 116 GNVNP----FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVV 171
N FV + L+ MY+K G + EAR++F+ + ER++ + +A+I ++ EE +
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
++F+ + G P+ +L A L+ G+ H +R + + NS++ +Y
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-VEPGLVTW 290
+KCG + +A++LF +M ER +++WNA++ G+ ++G + + F M++E V+P VT
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 291 NILIASYNQLGRCDIAVDLMRKMES--FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+++ + D +++ M + +G P + ++ + GR A + +++M
Sbjct: 360 LAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 58/356 (16%)
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFD 276
+CS+ R+ +++ + EMGF ++A++ + ++
Sbjct: 30 LCSNGRLQEALLEMAMLGPEMGFH-------------GYDALLNACLDKRALRDGQRVHA 76
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
M + P L+ Y G+CD D + ++ +V +W++MIS ++Q G
Sbjct: 77 HMIKTRYLPATYLRTRLLIFY---GKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQTG 132
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
+ AL + +M+ S +PN T +IHG+ VK + + G+
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
SL+DMY+K G ++ A+ IF+ + ERDV S II GY G +A E+F ++ P
Sbjct: 193 SLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSP 252
Query: 457 NVVTW-----------------------------------NALITGYMQSGAEDQALDLF 481
N VT+ N+LI Y + G A LF
Sbjct: 253 NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ-FFQIAPNSVTVLSIL 536
D +R SWN+++ G+ + G + +++FR M+ ++ P++VT+L++L
Sbjct: 313 -----DNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%)
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
++NV SW ++I+ + Q+G +A+ +F M PN T ++L + K+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
IH ++ N S I V + L+D YAK+G + +R IF+ LP +D++S +++
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 206/446 (46%), Gaps = 63/446 (14%)
Query: 88 TYMNLLQSCIDRDCIEVG--RELHARIGLVGNVNPFVETKLVSMYSKCGHLSE---ARKV 142
TY+ L ID C + +++HA + G ++ V V + C S+ A V
Sbjct: 26 TYLRL----IDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC-CASPSDMNYAYLV 80
Query: 143 FDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV--RHGFLPDEFLLPKILQACGKCG 200
F + +N F W+ +I SR E + +F DM+ P P + +A G+ G
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
GR +H + I+ G+ + N+++ +Y CG + A ++F M D V WN++I
Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIM 200
Query: 261 GFCQNGDIEQARKYFDAM-QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
GF + G I+QA+ FD M Q GV +WN +I+ + + GR A+D+ R+M+ +
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 320 PDVYTWSSMIS-----GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
PD +T S+++ G +++GR H + + E NSI V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF-----ELNSIVV-------------- 296
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC 434
+LIDMY KCG +E +F+ ++ + WN++I G
Sbjct: 297 ---------------------TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
+ GF +A +LF +++ S P+ V++ ++T SG +A + F+ +++ I+ ++
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ ++ +G ++A + + M
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSG--VEPNSITVXXXXXXXXXXXXXXXXXEIH 380
+ W+++I GF++ A+ + ML S V+P +T ++H
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
G+ +K L DD N+++ MY CG L + +W +G GF
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCL--------------IEAWRIFLG---MIGF-- 190
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+VV WN++I G+ + G DQA +LF D +RN SWNS+
Sbjct: 191 ----------------DVVAWNSMIMGFAKCGLIDQAQNLF-----DEMPQRNGVSWNSM 229
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
I+GF+++G+ A+ +FR MQ + P+ T++S+L A A L A ++ + IH +R
Sbjct: 230 ISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF 289
Query: 561 VSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
V LID Y K G + +F+ P K + WN M+
Sbjct: 290 ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 188/441 (42%), Gaps = 74/441 (16%)
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY-AKCGEMGFAKKLFKSMDERDSVTWN 256
+C + + IH+ I+ G+ S + ++A A +M +A +F ++ ++ WN
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 257 AIITGFCQNGDIEQARKYFDAM--QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME 314
II GF ++ E A F M V+P +T+ + +Y +LG+ L +
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
GL D + ++M+ + G A + M
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM-------------------------- 187
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYC 434
IG DV+ NS+I ++KCG ++ AQ +FD M +R+ SWN++I G+
Sbjct: 188 -------IGF------DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFV 234
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA----------------- 477
G A ++F +MQ+ D P+ T +L+ GA +Q
Sbjct: 235 RNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSI 294
Query: 478 -----LDLFKR---IEKDGKI-----KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+D++ + IE+ + K+ ++ WNS+I G +G +++AM +F ++
Sbjct: 295 VVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSG 354
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS-EISVSNILIDSYAKSGNLMYS 583
+ P+SV+ + +L A A+ + E + ++ I ++++ +G L +
Sbjct: 355 LEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEA 414
Query: 584 RRIFDGLPL-KDIISWNIMLS 603
+ +P+ +D + W+ +LS
Sbjct: 415 EALIKNMPVEEDTVIWSSLLS 435
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 205/463 (44%), Gaps = 53/463 (11%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLE-TGRLIHSVA 212
W + EE +DLF M++ LP K+L K + + L H +
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFA----KKLFKSMDERDSVTWNAIITGFCQNGDI 268
+ G+ + N ++ +C A K+ K E D VT +++I GFCQ +
Sbjct: 97 V-CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
A M+E G P +V +N +I ++G + AV+L +ME G+ D T++S+
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
++G GR A L+R M++ + PN
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPN-------------------------------- 243
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYE 444
V+T ++ID++ K G A ++++ M R DV+++N++I G C G +A +
Sbjct: 244 ---VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 445 LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
+ M P+VVT+N LI G+ +S D+ LF+ + + G + + ++N++I G+
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI-TYNTIIQGY 359
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
Q+G+ D A +IF RM PN T +L +K + + + +I
Sbjct: 360 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
+ NI+I K GN+ + +F L K D++S+ M+S
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 14/304 (4%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS--CIDR--DCIEVGRELHARIGLVGN 117
C G ++DAV + D + G + +TY +L+ C R D + R++ R +V N
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPN 243
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDL 173
V F T ++ ++ K G SEA K+++EM R ++FT++++I +E +
Sbjct: 244 VITF--TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
MV G LPD ++ K ++ G + + G+ N+I+ Y +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 234 CGEMGFAKKLFKSMDERDSV-TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
G A+++F MD R ++ T++ ++ G C N +E+A F+ MQ+ +E + T+NI
Sbjct: 362 AGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL-RKMLLS 351
+I ++G + A DL R + GL PDV ++++MISGF +K R + DLL RKM
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK-RQWDKSDLLYRKMQED 480
Query: 352 GVEP 355
G+ P
Sbjct: 481 GLLP 484
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 24/365 (6%)
Query: 112 IGLVGNVNPF-VETKLVSMYSKCGHLSEARKVFD---------EMRER-NLFTWSAMIGA 160
+ +VG + F E +V++ S + +VFD EM R ++ ++ +I
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 161 CSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDL-ETGRLIHSVAIRHGMCS 219
+ + V+LF M R G D ++ G + RL+ + +R +
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD-IVP 242
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYF 275
++ +++ V+ K G+ A KL++ M R D T+N++I G C +G +++A++
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
D M +G P +VT+N LI + + R D L R+M GL D T++++I G+ Q
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
GR A ++ +M PN T + K + D+ T
Sbjct: 363 GRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 396 NSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
N +I K G++E A +F + + DV S+ T+I G+C K+ L+ KMQ+
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 452 SDSPP 456
P
Sbjct: 480 DGLLP 484
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 45/239 (18%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---AR 111
++ +N LC +G + +A +LD + +G +TY L+ ++ G +L A+
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER-NLFTWSAMIGACSREKSWEEV 170
GLVG+ + ++ Y + G A+++F M R N+ T+S ++ E+
Sbjct: 343 RGLVGDTITY--NTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ LF +M + ++E +++ I HGMC
Sbjct: 401 LVLFENMQK--------------------SEIELDITTYNIVI-HGMC------------ 427
Query: 231 YAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
K G + A LF+S+ + D V++ +I+GFC+ +++ + MQE+G+ P
Sbjct: 428 --KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 192/425 (45%), Gaps = 45/425 (10%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
P V ++ + H + + ++ +W++ I +R E F DM
Sbjct: 5 PVVGITSPALITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTL 64
Query: 180 HGFLPDEFLLPKILQACG--KCGDLETGRLIHSVAIRHGM-CSSIRVNNSIMAVYAKCGE 236
G P+ +L CG G G L+H A + G+ + + V +I+ +Y+K G
Sbjct: 65 AGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR 124
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
A+ +F M++++SVTWN +I G+ ++G ++ A K FD M E L++W +I
Sbjct: 125 FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMING 180
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+ + G + A+ R+M+ G+ PD + ++ T G L + R +L + N
Sbjct: 181 FVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN 240
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
V NSLID+Y +CG +E A+++F
Sbjct: 241 -----------------------------------VRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 417 MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQ 476
M +R V SWN++I G+ G ++ F KMQ+ P+ VT+ +T G ++
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
L F+ ++ D +I + + L+ + ++G+ + A+++ + M + PN V + S+L
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLL 382
Query: 537 PAFAN 541
A +N
Sbjct: 383 AACSN 387
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 169/342 (49%), Gaps = 41/342 (11%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID--RDCIEVGRELHA--- 110
+++N L NG L++A + G + IT++ LL C D +G LH
Sbjct: 41 SRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYAC 100
Query: 111 RIGLVGNVNPFVETKLVSMYSKCGHLSEAR------------------------------ 140
++GL N + V T ++ MYSK G +AR
Sbjct: 101 KLGLDRN-HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNA 159
Query: 141 -KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKC 199
K+FD+M ER+L +W+AMI ++ EE + F +M G PD + L AC
Sbjct: 160 AKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNL 219
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
G L G +H + +++RV+NS++ +Y +CG + FA+++F +M++R V+WN++I
Sbjct: 220 GALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVI 279
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME-SFGL 318
GF NG+ ++ YF MQE+G +P VT+ + + + +G + + + M+ + +
Sbjct: 280 VGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
+P + + ++ +++ GR AL L++ M + +PN + +
Sbjct: 340 SPRIEHYGCLVDLYSRAGRLEDALKLVQSMPM---KPNEVVI 378
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 43/279 (15%)
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE--IHG 381
+W+S I+ T+ GR A M L+GVEPN IT +HG
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 382 IGVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
K+ L + V+ G ++I MYSK G + A+ +FD
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDY----------------------- 134
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
M+D +S VTWN +I GYM+SG D A +F ++ + R++ SW ++
Sbjct: 135 --------MEDKNS----VTWNTMIDGYMRSGQVDNAAKMFDKMPE-----RDLISWTAM 177
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
I GF++ G +++A+ FR MQ + P+ V +++ L A NL A +H L ++
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 561 VSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWN 599
+ + VSN LID Y + G + ++R++F + + ++SWN
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 210/467 (44%), Gaps = 76/467 (16%)
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
L H AI+ G S I V+N I+ Y K G +G+A LF M +RDSV+WN +I+G+ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA-------------------- 306
+E A F M+ G + +++ L+ + R D+
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 307 --VDLMRK-------MESFG--LTPDVYTWSSMISGFTQKGRTYHALDLLRKM-LLSGVE 354
VD+ K E+F P+ +W+++I+GF Q A LL M + + V
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
++ T ++H +K+ L ++ N++I Y+ CG + A+R+
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 415 FD-MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW------------ 461
FD + +D+ SWN++I G+ A+ELF++MQ ++ T+
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 462 -----------------------NALITGYMQ--SGAEDQALDLFKRIEKDGKIKRNVAS 496
NALI+ Y+Q +G + AL LF+ ++ +++ S
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-----SKDLIS 375
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
WNS+I GF Q G + A++ F ++ +I + ++L + ++L + ++IH A
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
+ VS V + LI Y+K G + +R+ F + K ++WN M+
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 219/499 (43%), Gaps = 45/499 (9%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
S G L DA + + GS V ++ LL+ ++G ++H + G N +
Sbjct: 78 SCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM-VRH 180
V + LV MY+KC + +A + F E+ E N +W+A+I + + + L M ++
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
D +L + +H+ ++ G+ I + N++++ YA CG + A
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 241 KKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW--------- 290
K++F + +D ++WN++I GF ++ E A + F MQ VE + T+
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG 317
Query: 291 --------------------------NILIASYNQL--GRCDIAVDLMRKMESFGLTPDV 322
N LI+ Y Q G + A+ L ++S D+
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS----KDL 373
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
+W+S+I+GF QKG + A+ + S ++ + +IH +
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGYCHAGFCGK 441
K V + +SLI MYSKCG +E+A++ F + + +WN +I GY G
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
+ +LF +M + + + VT+ A++T +G + L+L +E KI+ + + + +
Sbjct: 494 SLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAV 553
Query: 502 AGFLQSGQKDKAMQIFRRM 520
++G +KA ++ M
Sbjct: 554 DLLGRAGLVNKAKELIESM 572
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 202/491 (41%), Gaps = 80/491 (16%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V +++ Y K G L A +FDEM +R+ +W+ MI + E+ LF M R
Sbjct: 36 YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRS 95
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G D + ++L+ + G +H + I+ G ++ V +S++ +YAKC + A
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE------------------- 281
+ FK + E +SV+WNA+I GF Q DI+ A M+ +
Sbjct: 156 FEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDD 215
Query: 282 -----------------GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
G++ + N +I+SY C D R + G + D+ +
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSY---ADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+SMI+GF++ A +L +M VE + T +HG+ +
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 385 KMSLVDDVLTGNSLIDMYSK--CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKA 442
K L N+LI MY + G +E A +F+ + +D+ SWN+II G+ G A
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 443 YELFMKMQDSDSP-----------------------------------PNVVTWNALITG 467
+ F ++ S+ N ++LI
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
Y + G + A F++I K + +WN++I G+ Q G ++ +F +M +
Sbjct: 453 YSKCGIIESARKCFQQISS----KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 528 NSVTVLSILPA 538
+ VT +IL A
Sbjct: 509 DHVTFTAILTA 519
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 119/266 (44%), Gaps = 52/266 (19%)
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H +K + D+ N ++D Y K G L A +FD M +RD SWNT+I GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 440 GKAYELFMKMQDSDSPP-----------------------------------NVVTWNAL 464
A+ LF M+ S S NV ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ Y + + A + FK I + N SWN+LIAGF+Q A + M+
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEP-----NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 525 I----APNSVTVLSIL--PAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
A +L++L P F NL+ K++H L+ L EI++ N +I SYA G
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLL-----KQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 579 NLMYSRRIFDGL-PLKDIISWNIMLS 603
++ ++R+FDGL KD+ISWN M++
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIA 278
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETK-LVSMYSK--CGHLSEARKVFD 144
TY LL +C + G+ LH + G T L+SMY + G + +A +F+
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
++ ++L +W+++I +++ E+ V F + D++ +L++C L+
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS-VTWNAIITGFC 263
G+ IH++A + G S+ V +S++ +Y+KCG + A+K F+ + + S V WNA+I G+
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDV 322
Q+G + + F M + V+ VT+ ++ + + G ++L+ ME + + P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRM 546
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGI 382
+++ + + G A +L+ M L+ P+ + + ++
Sbjct: 547 EHYAAAVDLLGRAGLVNKAKELIESMPLN---PDPMVLKTFLGVCRACGEIEMATQVANH 603
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV-----YSWNTI 429
+++ +D T SL MYS E + MM ER V +SW I
Sbjct: 604 LLEIE-PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 8/267 (2%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVE 123
G DAV L KV + LL+SC D +++G+++HA G V N FV
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERN-LFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ L+ MYSKCG + ARK F ++ ++ W+AMI ++ + +DLF M
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 183 LPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
D IL AC G ++ G L++ + + + + + + + + G + AK
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 242 KLFKSMDERDSVTWNAIITGFCQN-GDIEQARKYFDAMQEEGVEP-GLVTWNILIASYNQ 299
+L +SM G C+ G+IE A + + + E +EP T+ L Y+
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE--IEPEDHFTYVSLSHMYSD 624
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWS 326
L + + + + M+ G+ V WS
Sbjct: 625 LKKWEEKASVKKMMKERGVKK-VPGWS 650
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+K+ HC A++ +S+I VSN ++DSY K G L Y+ +FD +P +D +SWN M+S
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 213/483 (44%), Gaps = 64/483 (13%)
Query: 106 RELHARIGLVGNVNPFVETKLVSMYSKCGHLSE------ARKVFDEMRERNLFTWSAMIG 159
R++HA++ + G + + LV + K LS+ A ++ D + LF ++MI
Sbjct: 23 RQIHAKLYVDGTLK---DDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 160 ACSREKSWEEVVDLFYDMVRHG--FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM 217
A + E+ D + ++ G PD + + ++QAC ETG +H + IR G
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
+ V ++++YA+ G + K+F S+ D V A++T + GD+ ARK F+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
M E D W++MISG+ Q G
Sbjct: 200 MPER---------------------------------------DPIAWNAMISGYAQVGE 220
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
+ AL++ M L GV+ N + + H + + V +
Sbjct: 221 SREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATT 280
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
L+D+Y+KCGD+E A +F M E++VY+W++ + G GF K ELF M+ PN
Sbjct: 281 LVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPN 340
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
VT+ +++ G G D+ F + + I+ + + L+ + ++G+ + A+ I
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSII 400
Query: 518 RRMQFFQIAPNSVTVLSILPA---FANL----VAGKKVKEIHCCALRRNLVSEISVSNIL 570
++M + P++ S+L A + NL +A KK+ E+ N + + +SNI
Sbjct: 401 QQM---PMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETA----NHGAYVLLSNIY 453
Query: 571 IDS 573
DS
Sbjct: 454 ADS 456
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 81 GSKVRPITYMN--LLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYS------ 131
G+ ++P Y L+Q+C E G ++H G + +P V+T L+S+Y+
Sbjct: 101 GNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLD 160
Query: 132 -------------------------KCGHLSEARKVFDEMRERNLFTWSAMIGACSREKS 166
+CG + ARK+F+ M ER+ W+AMI ++
Sbjct: 161 SCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGE 220
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNS 226
E +++F+ M G + + +L AC + G L+ GR HS R+ + ++R+ +
Sbjct: 221 SREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATT 280
Query: 227 IMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
++ +YAKCG+M A ++F M+E++ TW++ + G NG E+ + F M+++GV P
Sbjct: 281 LVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPN 340
Query: 287 LVTWNILIASYNQLGRCDIA---VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
VT+ ++ + +G D D MR FG+ P + + ++ + + GR A+
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQRHFDSMRN--EFGIEPQLEHYGCLVDLYARAGRLEDAVS 398
Query: 344 LLRKM 348
++++M
Sbjct: 399 IIQQM 403
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 66/339 (19%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG--VEPNSITVXXXXXXXXXXXXXXXXX 377
P ++ +SMI + + D R++L SG ++P++ TV
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYS-------------------------------KCG 406
++HG+ ++ +D LI +Y+ +CG
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
D+ A+++F+ M ERD +WN +I GY G +A +F MQ N V ++++
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 467 GYMQSGAEDQA----------------------LDLFKR---IEKD-----GKIKRNVAS 496
Q GA DQ +DL+ + +EK G ++NV +
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
W+S + G +G +K +++F M+ + PN+VT +S+L ++V + H ++
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG-CSVVGFVDEGQRHFDSM 367
Query: 557 RRNLVSEISVSNI--LIDSYAKSGNLMYSRRIFDGLPLK 593
R E + + L+D YA++G L + I +P+K
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 232/487 (47%), Gaps = 23/487 (4%)
Query: 136 LSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
+SEA +F +R ++ + + ++ + K + +++F +++ F P +F+ K
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER- 250
+QA K D+ G + + + S+ + N ++ K M A++LF M R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 251 ---DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV 307
+T+N +I G+C+ G+ E++ K + M+ + +EP L+T+N L+ + G + A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 308 DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXX 367
+++++M+ G PD +T+S + G++ + AL + + SGV+ N+ T
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DV 423
EI G + LV + + N++ID Y + GDL A+ + M ++ D
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
++N +I +C G A + KM+ P+V T+N LI GY + D+ D+ K
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
+E +G + NV S+ +LI + + +A + R M+ ++P V + ++L
Sbjct: 485 MEDNGTMP-NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK-VRIYNML--IDGCC 540
Query: 544 AGKKVKEIHCCA---LRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DII 596
+ K+++ + L++ + + N LID + +G L + + + K D+
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 597 SWNIMLS 603
++N ++S
Sbjct: 601 TYNSLIS 607
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 190/418 (45%), Gaps = 48/418 (11%)
Query: 126 LVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ Y K G+ ++ KV + M+ E +L T++ ++ + E+ ++ +M G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F+PD F + E ++ A+ G+ + + ++ K G++ A+
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 242 KLF-KSMDE---RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
++ + M + + V +N +I G+C+ GD+ AR +AM+++G++P + +N LI +
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
+LG + A + KM+ G++P V T++ +I G+ +K D+L++M +G PN
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN- 493
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
V++ +LI+ K L AQ +
Sbjct: 494 ----------------------------------VVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 418 MYERDVYS----WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
M +R V +N +I G C G A+ +M N+VT+N LI G +G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
+A DL I + G +K +V ++NSLI+G+ +G + + ++ M+ I P T
Sbjct: 580 LSEAEDLLLEISRKG-LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 197/473 (41%), Gaps = 45/473 (9%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVG 116
LN LC G + A IL +G + Y ++ C D + ++ A
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVD 172
+ L+ + + G + A K ++M+ + ++ T++ +IG R+ +++ D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+ +M +G +P+ ++ K L +++ G+ +R+
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI--------- 531
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
+N +I G C G IE A ++ M ++G+E LVT+N
Sbjct: 532 ----------------------YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI + G+ A DL+ ++ GL PDV+T++S+ISG+ G + L +M SG
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
++P ++ + G +MSL D+L N ++ Y+ GD+E A
Sbjct: 630 IKP-TLKTYHLLISLCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 413 RIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
+ M E+ D ++N++I G G + L +M + P T+N ++ G+
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
+ A ++ +++ G + +V N L++G + + +A + M
Sbjct: 746 CEVKDYMSAYVWYREMQEKGFL-LDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 46/308 (14%)
Query: 49 PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL 108
P + + ++ CS G + DA + ++G ++ +TY L+
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID-------------- 572
Query: 109 HARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSRE 164
GL S G LSEA + E+ + L FT++++I
Sbjct: 573 ----GL----------------SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
+ + + L+ +M R G P ++ C K G T RL ++++ + V
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK----PDLLVY 668
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
N ++ YA G+M A L K M E+ D T+N++I G + G + + R D M
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
+EP T+NI++ + ++ A R+M+ G DV + ++SG ++ R+
Sbjct: 729 REMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKE 788
Query: 341 ALDLLRKM 348
A ++ +M
Sbjct: 789 AEIVISEM 796
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 41/362 (11%)
Query: 125 KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLF-YDMVRHGFL 183
+L+S+ S G A VF++++ + FTW+ MI + S E + LF M+ H
Sbjct: 57 QLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQ 116
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
D+F P +++AC + G +H +AI+ G + + N++M +Y KCG+ +K+
Sbjct: 117 FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRC 303
F M R V+W ++ G N ++ A F+ M
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP------------------------ 212
Query: 304 DIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXX 363
MR +V +W++MI+ + + R A L R+M + V+PN T+
Sbjct: 213 ------MR---------NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV 423
+H K V D G +LIDMYSKCG L+ A+++FD+M + +
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDS-PPNVVTWNALITGYMQSGAEDQALDLFK 482
+WN++I G +A LF +M++ S P+ +T+ +++ +G L F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 483 RI 484
R+
Sbjct: 378 RM 379
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 45/312 (14%)
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI+ + G A + +++S P +TW+ MI + + AL L M++S
Sbjct: 58 LISVSSSFGETQYASLVFNQLQS----PSTFTWNLMIRSLSVNHKPREALLLFILMMISH 113
Query: 353 -VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
+ + T ++HG+ +K +DV N+L+D+Y KCG ++
Sbjct: 114 QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSG 173
Query: 412 QRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
+++FD M R ++V+W ++ G + +
Sbjct: 174 RKVFDKMPGR-----------------------------------SIVSWTTMLYGLVSN 198
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
D A +F ++ RNV SW ++I ++++ + D+A Q+FRRMQ + PN T
Sbjct: 199 SQLDSAEIVFNQMPM-----RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
++++L A L + + +H A + V + + LID Y+K G+L +R++FD +
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 592 LKDIISWNIMLS 603
K + +WN M++
Sbjct: 314 GKSLATWNSMIT 325
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 82 SKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSE 138
S+ T+ ++++C+ I +G ++H + G +V F + L+ +Y KCG
Sbjct: 115 SQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDV--FFQNTLMDLYFKCGKPDS 172
Query: 139 ARKVFDEMRE-------------------------------RNLFTWSAMIGACSREKSW 167
RKVFD+M RN+ +W+AMI A + +
Sbjct: 173 GRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRP 232
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+E LF M P+EF + +LQA + G L GR +H A ++G + ++
Sbjct: 233 DEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTAL 292
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-VEPG 286
+ +Y+KCG + A+K+F M + TWN++IT +G E+A F+ M+EE VEP
Sbjct: 293 IDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPD 352
Query: 287 LVTW-NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+T+ +L A N D R ++ +G++P + MI Q A +L+
Sbjct: 353 AITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLV 412
Query: 346 RKM 348
M
Sbjct: 413 ESM 415
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 5/174 (2%)
Query: 80 QGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLVSMYSKCGHL 136
Q V+P T +NLLQ+ + +GR +H G V + F+ T L+ MYSKCG L
Sbjct: 243 QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQA 195
+ARKVFD M+ ++L TW++MI + EE + LF +M + PD +L A
Sbjct: 303 QDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM-AVYAKCGEMGFAKKLFKSMD 248
C G+++ G + I+ S IR +N+ M + + E+ A L +SMD
Sbjct: 363 CANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMD 416
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 237/542 (43%), Gaps = 116/542 (21%)
Query: 101 CIEVGRELHARIGLVGNVNPFVET-KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIG 159
C++ G H R G+ V + +LV++YSK G L EAR VFDEM ERN+++W+A+I
Sbjct: 3 CLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 160 ACSREKSWEEVVDLF-----------YDMVRHGFLP------------------------ 184
A + + +E +LF Y+ + GF
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 185 -DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
D+F + +++ K ++ G +H V ++ G + +S++ +Y+KCG+ +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 244 FKS--MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
F ++ DSV NA+I +C+ GDI++A F E ++WN LIA Y Q G
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNG 239
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
+ A+ + ME GL D +++ ++++ +LS ++ I
Sbjct: 240 YEEEALKMAVSMEENGLKWDEHSFGAVLN------------------VLSSLKSLKI--- 278
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER 421
E+H +K + + ++D+Y KCG+++ A+ +
Sbjct: 279 --------------GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
++YS +++I GY G +A LF DS S N+V W A+ GY+ D L+L
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLF----DSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
+ + IA + P+S+ ++S+L A +
Sbjct: 381 R----------------AFIANETNT-------------------PDSLVMVSVLGACSL 405
Query: 542 LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIM 601
+ KEIH +LR ++ + + +D Y+K GN+ Y+ RIFD +D + +N M
Sbjct: 406 QAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAM 465
Query: 602 LS 603
++
Sbjct: 466 IA 467
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 221/521 (42%), Gaps = 84/521 (16%)
Query: 105 GRELHARIGLVGN-VNPFVETKLVSMYSKCGHLSEARKVFDEM----------------- 146
G +LH + GN F + L+ MYSKCG E +F+
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 147 -RERNL----------------FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLL 189
RE ++ +W+ +I ++ EE + + M +G DE
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 190 PKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE 249
+L L+ G+ +H+ +++G S+ V++ I+ VY KCG M +A+
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
+ + +++I G+ G + +A++ FD++ E+ LV W + Y L + D ++L
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKN----LVVWTAMFLGYLNLRQPDSVLEL 379
Query: 310 MRK-MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
R + + TPD S++ + L + +EP
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACS---------------LQAYMEPGK----------- 413
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
EIHG ++ ++ D + +DMYSKCG++E A+RIFD +ERD +N
Sbjct: 414 ---------EIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I G H G K+++ F M + P+ +T+ AL++ G + FK + +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I + +I + ++ + DKA+++ + Q+ ++V IL AF N + K
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGID--QVEKDAV----ILGAFLNACSWNKN 578
Query: 549 KEIHCCALRRNLVSEISVSNILI---DSYAKSGNLMYSRRI 586
E+ + LV E S + I ++YA SG +RI
Sbjct: 579 TELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRI 619
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 184/442 (41%), Gaps = 116/442 (26%)
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNA 257
KC L+ G L H +I+ G + +N ++ +Y+K G + A+ +F M ER+ +WNA
Sbjct: 2 KC--LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNA 59
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI-AVDL---MRKM 313
+I + + ++++AR+ F++ + E L+T+N L++ + + C+ A+++ M +
Sbjct: 60 VIAAYVKFNNVKEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRK 116
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
E + D +T ++M+ + ++
Sbjct: 117 EKDDIWIDDFTVTTMVKLSAKLTNVFYG-------------------------------- 144
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD--MMYERDVYSWNTIIG 431
++HG+ VK +SLI MYSKCG + IF+ + D + N +I
Sbjct: 145 ---EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIA 201
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
YC G KA +F + + + + ++WN LI GY Q+G E++AL + +E++G
Sbjct: 202 AYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENG--- 255
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEI 551
W+ G VL++L + +L G KE+
Sbjct: 256 ---LKWDEHSFG---------------------------AVLNVLSSLKSLKIG---KEV 282
Query: 552 HCCALRRNLVSEISVSNILIDSYAKSGNLMY----------------------------- 582
H L+ S VS+ ++D Y K GN+ Y
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 583 --SRRIFDGLPLKDIISWNIML 602
++R+FD L K+++ W M
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMF 364
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 145/268 (54%), Gaps = 6/268 (2%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
T+ +LL++C +E GR+LH ++GL NV +V L++MY++C + AR VFD
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV--YVCPTLINMYTECEDVDSARCVFD 188
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
+ E + ++AMI +R E + LF +M P+E L +L +C G L+
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
G+ IH A +H C ++VN +++ ++AKCG + A +F+ M +D+ W+A+I +
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYAN 308
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVY 323
+G E++ F+ M+ E V+P +T+ L+ + + GR + +M S FG+ P +
Sbjct: 309 HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLS 351
+ SM+ ++ G A + + K+ +S
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 139/319 (43%), Gaps = 40/319 (12%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
+S AR +F+ M E ++ +++M SR + EV LF +++ G LPD + P +L+A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
C LE GR +H ++++ G+ ++ V +++ +Y +C ++ A+ +F + E V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT------------------W------- 290
NA+ITG+ + +A F MQ + ++P +T W
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 291 ----------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
LI + + G D AV + KM D WS+MI + G+
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR----YKDTQAWSAMIVAYANHGKAEK 314
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV-KMSLVDDVLTGNSLI 399
++ + +M V+P+ IT + V K +V + S++
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 400 DMYSKCGDLEAAQRIFDMM 418
D+ S+ G+LE A D +
Sbjct: 375 DLLSRAGNLEDAYEFIDKL 393
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 146/321 (45%), Gaps = 42/321 (13%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PD+ ++SM G+++ L ++L G+ P++ T ++
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H + +K+ L D+V +LI+MY++C D+++A+ +FD + E V +N +I GY
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 440 GKAYELFMKMQDSDSPPNVVT------------------W-----------------NAL 464
+A LF +MQ PN +T W AL
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I + + G+ D A+ +F+++ ++ +W+++I + G+ +K+M +F RM+
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRY-----KDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR-NLVSEISVSNILIDSYAKSGNLMYS 583
+ P+ +T L +L A ++ ++ ++ + + +V I ++D +++GNL +
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 584 RRIFDGLPLKDI-ISWNIMLS 603
D LP+ + W I+L+
Sbjct: 387 YEFIDKLPISPTPMLWRILLA 407
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 152/348 (43%), Gaps = 37/348 (10%)
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL--- 293
M +A+ LF++M E D V +N++ G+ + + + F + E+G+ P T+ L
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 294 --IASYNQLGR-----------------CDIAVDLMRKMESFG---------LTPDVYTW 325
+A + GR C +++ + E + P V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MI+G+ ++ R AL L R+M ++PN IT+ IH K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
S V +LIDM++KCG L+ A IF+ M +D +W+ +I Y + G K+ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F +M+ + P+ +T+ L+ +G ++ F ++ I ++ + S++
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKE 550
++G + A + ++ I+P + +L+ + NL +KV E
Sbjct: 379 RAGNLEDAYEFIDKL---PISPTPMLWRILLAACSSHNNLDLAEKVSE 423
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/553 (22%), Positives = 240/553 (43%), Gaps = 83/553 (15%)
Query: 67 LSDAVAILDSLAEQGS--KVRP----ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVN 119
LSD + + D++ G K RP + + LL + + E+ L ++ +G + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFY 175
+ + ++ + + LS A V +M E ++ T S+++ K + V L
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
MV G+ PD F ++ G +H+ A
Sbjct: 178 QMVEMGYKPDTFTFTTLIH----------GLFLHNKASE--------------------- 206
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ ++ + + D VT+ ++ G C+ GDI+ A + M+ ++ +V +N +I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
S + ++AVDL +ME+ G+ P+V T++S+I+ GR A LL ML + P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
N V+T N+LID + K G L A+++
Sbjct: 327 N-----------------------------------VVTFNALIDAFFKEGKLVEAEKLH 351
Query: 416 DMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
+ M +R D ++N +I G+C +A ++F M D PN+ T+N LI G+ +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
+ ++LF+ + + G + N ++ ++I GF Q+G D A +F++M ++ + +T
Sbjct: 412 KRVEDGVELFREMSQRGLVG-NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
+L + I + + I + N +I+ K+G + + +F L
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 592 LK-DIISWNIMLS 603
+K D++++N M+S
Sbjct: 531 IKPDVVTYNTMIS 543
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 218/480 (45%), Gaps = 32/480 (6%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHAR-- 111
+ + LN C + +SDAVA++D + E G K T+ L+ G LH +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH----------GLFLHNKAS 205
Query: 112 --IGLVGNV-----NPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMI 158
+ LV + P + T +V+ K G + A + ++M + N+ ++ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ + + E VDLF +M G P+ ++ G + S + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKY 274
++ N+++ + K G++ A+KL + M +R D++T+N +I GFC + +++A++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
F M + P + T+N LI + + R + V+L R+M GL + T++++I GF Q
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G A + ++M+ + V + +T I K + ++
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 395 GNSLIDMYSKCGDLEAAQRIF-DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
N++I+ K G + A +F + + DV ++NT+I G C +A +LF KM++
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
+ PN T+N LI ++ + +L K + G + AS SL+ L G+ DK+
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD--ASTISLVTNMLHDGRLDKS 623
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 225/511 (44%), Gaps = 23/511 (4%)
Query: 45 IRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQ----GSKVRPITYMNLLQSCIDRD 100
++S P+P + + N+L S + ++ SL EQ G TY + R
Sbjct: 75 VKSRPFPSIV--EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 101 CIEVGRELHARIGLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWS 155
+ + + A++ +G V + L++ Y +S+A + D+M E + FT++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
+I E V L MV+ G PD ++ K GD++ + +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQA 271
+ +++ + N+I+ K + A LF M+ + + VT+N++I C G A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ M E+ + P +VT+N LI ++ + G+ A L +M + PD T++ +I+G
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
F R A + + M+ PN T E+ + LV +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFM 447
+T ++I + + GD ++AQ +F M D+ +++ ++ G C G A +F
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+Q S+ N+ +N +I G ++G +A DLF + IK +V ++N++I+G
Sbjct: 493 YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS----IKPDVVTYNTMISGLCSK 548
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+A +FR+M+ PNS T +++ A
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/548 (22%), Positives = 237/548 (43%), Gaps = 48/548 (8%)
Query: 5 LIILPTKSRPPLSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDA--QLNQLC 62
L+++ S+ S + A +FE ++S ++N N S+ S + +++ L Q+
Sbjct: 54 LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMV 113
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVGNVNPF 121
G L + L+++ G+ I L++ C + + L G +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMR-ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
++S Y K G ++ A V D M ++ T++ ++ + ++ +++ M++
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD +++A C D +G A
Sbjct: 234 DCYPDVITYTILIEA--TCRD---------------------------------SGVGHA 258
Query: 241 KKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
KL M +R D VT+N ++ G C+ G +++A K+ + M G +P ++T NI++ S
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
GR A L+ M G +P V T++ +I+ +KG A+D+L KM G +PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
S++ E V D++T N+++ K G +E A I +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 417 MMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
+ + + ++NT+I G AG GKA +L +M+ D P+ +T+++L+ G + G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
D+A+ F E+ G I+ N ++NS++ G +S Q D+A+ M PN +
Sbjct: 499 KVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 533 LSILPAFA 540
++ A
Sbjct: 558 TILIEGLA 565
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 178/389 (45%), Gaps = 30/389 (7%)
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
+N+ + + GE+ K ++M + D + +I GFC+ G +A K + ++
Sbjct: 105 SNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
G P ++T+N++I+ Y + G + A+ ++ +M ++PDV T+++++ G+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD--------- 390
A+++L +ML P+ IT G+G M L+D
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDS---------GVGHAMKLLDEMRDRGCTP 272
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELF 446
DV+T N L++ K G L+ A + + M + +V + N I+ C G A +L
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
M P+VVT+N LI + G +A+D+ +++ + G + N S+N L+ GF +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCK 391
Query: 507 SGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISV 566
+ D+A++ RM P+ VT ++L A + EI + +
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 567 SNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
N +ID AK+G + ++ D + KD+
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 204/456 (44%), Gaps = 56/456 (12%)
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMC 218
R ++ +DLF+ MV+ LP ++L A K + + + I H +C
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 219 SSIRVNNSIMAVYAKCGEMG----FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKY 274
+ N ++ + +C ++ F K+ K E VT+ +++ GFC+ + A
Sbjct: 118 TC----NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
FD M G +P +V +N +I + + D A+DL+ +ME G+ PDV T++S+ISG
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
GR A ++ M + P DV T
Sbjct: 234 SGRWSDATRMVSCMTKREIYP-----------------------------------DVFT 258
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N+LID K G + A+ ++ M R D+ +++ +I G C +A E+F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
P+VVT++ LI GY +S + + LF + + G + RN ++ LI G+ ++G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG-VVRNTVTYTILIQGYCRAGKL 377
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
+ A +IFRRM F + PN +T +L + +K I + + ++I NI+
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 571 IDSYAKSGNLMYSRRIFDGLP----LKDIISWNIML 602
I K+G + + I+ L + DI ++ M+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 170/375 (45%), Gaps = 12/375 (3%)
Query: 126 LVSMYSKCGHLSEARKVFDEM----RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L++ + +C LS A +M E ++ T+ +++ R + + +F MV G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
+ P+ + I+ K ++ + + + G+ + NS+++ G A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 242 KLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
++ M +R D T+NA+I + G + +A ++++ M ++P +VT+++LI
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
R D A ++ M S G PDV T+S +I+G+ + + H + L +M GV N+
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
+T EI V + +++T N L+ G +E A I
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 418 M----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
M + D+ ++N II G C AG A++++ + P++ T+ ++ G + G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 474 EDQALDLFKRIEKDG 488
+A LF+++++DG
Sbjct: 482 RREADALFRKMKEDG 496
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVG 116
++ LC + + +A+ +L+ + + G +TY +L+ C + R +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVD 172
+ F L+ K G +SEA + ++EM R+L T+S +I +E +
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+F MV G PD ++ K +E G + + G+ + ++ Y
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 233 KCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ G++ A+++F+ M + +T+N ++ G C NG IE+A MQ+ G++ +V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+NI+I + G A D+ + GL PD++T+++M+ G +KG A L RKM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 349 LLSGVEPNSITV 360
G+ PN V
Sbjct: 493 KEDGILPNECYV 504
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 174/414 (42%), Gaps = 85/414 (20%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
LN C + DA+ + D + G K + Y ++ ++ +L R+ G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG- 216
Query: 118 VNPFVET--KLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVV 171
+ P V T L+S G S+A ++ M +R ++FT++A+I AC +E E
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
+ + +M+R PD ++ + +G+C R++
Sbjct: 277 EFYEEMIRRSLDPD---------------------IVTYSLLIYGLCMYSRLDE------ 309
Query: 232 AKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
A+++F M + D VT++ +I G+C++ +E K F M + GV
Sbjct: 310 --------AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
VT+ ILI Y + G+ ++A ++ R+M G+ P++ T++ ++ G G+ AL +L
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
M +G++ D++T N +I K G+
Sbjct: 422 MQKNGMDA-----------------------------------DIVTYNIIIRGMCKAGE 446
Query: 408 LEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
+ A I+ + + D++++ T++ G G +A LF KM++ PN
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 227/502 (45%), Gaps = 59/502 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N LC G +S+A+ ++D + E G K IT L+ C+ G+E A + +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL----CLS-GKEAEAMLLIDKM 219
Query: 118 V------NPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSW 167
V N ++++ K G + A ++ +M ERN+ +S +I + S
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+ +LF +M G + ++ G + G + I+ + ++ + +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G++ A++L K M R D++T+ ++I GFC+ +++A + D M +G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
+P + T+NILI Y + R D ++L RKM G+ D T++++I GF + G+ A +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
L ++M+ V PN ++T L+D
Sbjct: 460 LFQEMVSRKVPPN-----------------------------------IVTYKILLDGLC 484
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
G+ E A IF+ + E D+ +N II G C+A A++LF + P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+N +I G + G +A LF+++E+DG + ++N LI L G K++++
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP-DGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 520 MQFFQIAPNSVTVLSILPAFAN 541
++ + ++ T+ ++ ++
Sbjct: 604 LKRCGFSVDASTIKMVIDMLSD 625
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 213/472 (45%), Gaps = 35/472 (7%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDL----------- 202
+S + A ++ K ++ V+ L M G + + L ++ +C L
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 203 ----ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
E + S I +G+C RV+ ++ V + EMG + D +T N +
Sbjct: 151 KLGYEPNTITFSTLI-NGLCLEGRVSEALELV-DRMVEMGH---------KPDLITINTL 199
Query: 259 ITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL 318
+ G C +G +A D M E G +P VT+ ++ + G+ +A++L+RKME +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE 378
D +S +I G + G +A +L +M + G+ N IT +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYC 434
+ +K + +V+T + LID + K G L A+ + M R D ++ ++I G+C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 435 HAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNV 494
KA ++ M PN+ T+N LI GY ++ D L+LF+++ G + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
++N+LI GF + G+ + A ++F+ M ++ PN VT +L + +K EI
Sbjct: 440 -TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
+ + +I + NI+I + + + +F LPLK + ++NIM+
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 50/325 (15%)
Query: 31 STRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYM 90
+ +H + ++ ++ Y +D C L A ++D + +G T+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDG----FCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 91 NLLQSCIDRDCIEVGRELHARIGLVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRER 149
L+ + I+ G EL ++ L G V V L+ + + G L+ A+++F EM R
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 150 ----NLFTWSAMI-GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
N+ T+ ++ G C +S E+ +++F + + +L+
Sbjct: 468 KVPPNIVTYKILLDGLCDNGES-EKALEIFEKIEKSKM------------------ELDI 508
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIIT 260
G I+++ I HGMC++ +V++ A LF S+ + T+N +I
Sbjct: 509 G--IYNIII-HGMCNASKVDD--------------AWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
G C+ G + +A F M+E+G P T+NILI ++ G +V L+ +++ G +
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Query: 321 DVYTWSSMISGFTQKGRTYHALDLL 345
D T +I + LD+L
Sbjct: 612 DASTIKMVIDMLSDGRLKKSFLDML 636
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/569 (23%), Positives = 248/569 (43%), Gaps = 52/569 (9%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
++ ++ C G LS A+++L + + + +TY ++ + + + + +
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188
Query: 114 LVGNVNPFVE-TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
+G + V L+ + K G+ A+ + DE+ E NL T + ++ + + EE
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA-- 246
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI------------------------ 208
+ DMV GF PD I+ K G + G L+
Sbjct: 247 -YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 209 ------HSVA-----IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV---- 253
H++A + G+ + V +M K G++ A+K FK + E + V
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
T+ A++ G C+ GD+ A M E+ V P +VT++ +I Y + G + AV L+RKM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
E + P+ +T+ ++I G + G+ A++L ++M L GVE N+ +
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTI 429
+ V + D + SLID++ K GD EAA + M ER DV S+N +
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGK 489
I G G G + + M++ P++ T+N ++ + G + L L+ +++ G
Sbjct: 546 ISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG- 603
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVK 549
IK ++ S N ++ ++G+ ++A+ I +M +I PN T L + +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 550 EIHCCALRRNLVSEISVSNILIDSYAKSG 578
+ H L + V N LI + K G
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 224/472 (47%), Gaps = 53/472 (11%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDL-ETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M G +PD L ++ G + + LI+S I G+ + N ++ + K G
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 236 EMGFAKKLFKS-MDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
+ FA L ++ + D+VT+N +I+G C++G ++A ++ M + G+ P V++N LI
Sbjct: 144 RLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 295 ASYNQLG---RCDIAVDLM-------------------------RKMESFGLTPDVYTWS 326
+ ++G R VD + R M G PDV T+S
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 263
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
S+I+ + G+ LLR+M V PN +T ++ V
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKA 442
+ D++ L+D K GDL A++ F M+ E +V ++ ++ G C AG A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 443 YELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIA 502
+ +M + PNVVT++++I GY++ G ++A+ L +++E D + N ++ ++I
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME-DQNVVPNGFTYGTVID 442
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN-LVAGKKVKEIHCCALRRNLV 561
G ++G+++ A+++ + M+ + N+ IL A N L ++KE+ L +++V
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNY----ILDALVNHLKRIGRIKEVK--GLVKDMV 496
Query: 562 SE-ISVSNI----LIDSYAKSGNLMYSRRIFD-----GLPLKDIISWNIMLS 603
S+ +++ I LID + K G+ + + G+P D++S+N+++S
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW-DVVSYNVLIS 547
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/579 (22%), Positives = 242/579 (41%), Gaps = 61/579 (10%)
Query: 28 FIASTRVHANSNYVSMSIRSLP-----YPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGS 82
F A+ HA + Y M +R +P Y MD L G L +A L E
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDG----LFKAGDLREAEKTFKMLLEDNQ 360
Query: 83 KVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET--KLVSMYSKCGHLSEAR 140
+TY L+ + + ++ L +V P V T +++ Y K G L EA
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQM-LEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 141 KVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC 196
+ +M ++N+ FT+ +I + E ++L +M G + ++L ++
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DS 252
+ G ++ + + + G+ S++ V+ K G+ A + M ER D
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
V++N +I+G + G + A + M+E+G+EP + T+NI++ S + G + + L K
Sbjct: 540 VSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M+S G+ P + + + ++ + G+ A+ +L +M+L + PN T
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 373 XXXXXEIH----GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNT 428
+ H G+K+S R VY NT
Sbjct: 659 ADAIFKTHETLLSYGIKLS---------------------------------RQVY--NT 683
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I C G KA + M+ P+ VT+N+L+ GY +AL + + + G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I NVA++N++I G +G + + M+ + P+ T +++ A + K
Sbjct: 744 -ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
I+C + LV + S N+LI +A G ++ +R +
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELL 841
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/497 (20%), Positives = 206/497 (41%), Gaps = 55/497 (11%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYD 176
F L+ + K G LS A + +R R + T++ +I +E +
Sbjct: 130 FALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSE 186
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
MV+ G LPD N+++ + K G
Sbjct: 187 MVKMGILPDTVSY-----------------------------------NTLIDGFCKVGN 211
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
AK L + E + +T +++ + IE+A + M G +P +VT++ +I
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINR 268
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+ G+ L+R+ME + P+ T+++++ + HAL L +M++ G+ +
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
+ + + ++ + V +V+T +L+D K GDL +A+ I
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 417 MMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
M E+ +V +++++I GY G +A L KM+D + PN T+ +I G ++G
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
E+ A++L K + G ++ N ++L+ + G+ + + + M + + +
Sbjct: 449 KEEMAIELSKEMRLIG-VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
S++ F + R + ++ N+LI K G + + + G+
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMRE 566
Query: 593 K----DIISWNIMLSQE 605
K DI ++NIM++ +
Sbjct: 567 KGIEPDIATFNIMMNSQ 583
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 208/535 (38%), Gaps = 85/535 (15%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
A ++ LC G LS A I+ + E+ +TY +++ + + +E L ++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 116 GNV-NPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEV 170
V N F ++ K G A ++ EMR E N + A++ R +EV
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
L DMV G D+ ++ K GD E GM + N +++
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 548
Query: 231 YAKCGEMGFAKKLFKSMDER----DSVTWNA----------------------------- 257
K G++G A +K M E+ D T+N
Sbjct: 549 MLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS 607
Query: 258 -----IITG-FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
I+ G C+NG +E+A + M + P L T+ I + + ++ R D
Sbjct: 608 LMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHE 667
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
+ S+G+ ++++I+ + G T A ++ M G P+++T
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF----------- 716
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWN 427
NSL+ Y + A + +M E +V ++N
Sbjct: 717 ------------------------NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKD 487
TII G AG + + +M+ P+ T+NALI+G + G ++ ++ + D
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 488 GKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL 542
G + + +++N LI+ F G+ +A ++ + M ++PN+ T +++ L
Sbjct: 813 GLVPKT-STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 120/314 (38%), Gaps = 64/314 (20%)
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL-RKMLLSGVEPNSITVXXXX 364
A + M +FG+ PD W+S+I F G + + L+ KM+ GV P
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSP--------- 127
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF-DMMYERDV 423
DV N LI + K G L A + + + D
Sbjct: 128 --------------------------DVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT 161
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
++NT+I G C G +AY+ +M P+ V++N LI G+ + G +A L
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 484 IEKDGKIKR---------------------------NVASWNSLIAGFLQSGQKDKAMQI 516
I + I +V +++S+I + G+ + +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
R M+ + PN VT +++ + + ++ + R + ++ V +L+D K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 577 SGNLMYSRRIFDGL 590
+G+L + + F L
Sbjct: 342 AGDLREAEKTFKML 355
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 191/448 (42%), Gaps = 37/448 (8%)
Query: 153 TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
T++ +I A R + + DM +G +PDE ++Q + GDL+ I
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR 272
+ G CS +V+ N I+ GFC+ G +E A
Sbjct: 251 VEFG-CS------------------------------WSNVSVNVIVHGFCKEGRVEDAL 279
Query: 273 KYFDAM-QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
+ M ++G P T+N L+ + G A+++M M G PDVYT++S+ISG
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ G A+++L +M+ PN++T E+ + ++ D
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFM 447
V T NSLI + A +F+ M E D +++N +I C G +A +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M+ S +V+T+N LI G+ ++ +A ++F +E G + RN ++N+LI G +S
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG-VSRNSVTYNTLIDGLCKS 518
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVS 567
+ + A Q+ +M P+ T S+L F KK +I +I
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDI 595
LI K+G + + ++ + +K I
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 164/338 (48%), Gaps = 26/338 (7%)
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G++P + T+N+LI + + + A+ ++ M S+GL PD T+++++ G+ ++G A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVKMSLVDDVLTGNSLID 400
L + +M+ G ++++V I + + D T N+L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 401 MYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
K G ++ A I D+M Y+ DVY++N++I G C G +A E+ +M D P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
N VT+N LI+ + ++A +L + + G I +V ++NSLI G + AM++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGK--------KVKEIHCCALRRNLVSEISVSN 568
F M+ P+ T ++ + + GK K E+ CA R++++ N
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCS--KGKLDEALNMLKQMELSGCA--RSVIT----YN 474
Query: 569 ILIDSYAKSGNLMYSRRIFDGLPL----KDIISWNIML 602
LID + K+ + IFD + + ++ +++N ++
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 145/321 (45%), Gaps = 41/321 (12%)
Query: 251 DSVTWNAIITGFC-----------------------------------QNGDIEQARKYF 275
D T+N +I C + GD++ A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF-GLTPDVYTWSSMISGFTQ 334
+ M E G V+ N+++ + + GR + A++ +++M + G PD YT++++++G +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G HA++++ ML G +P+ T E+ + + +T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N+LI K +E A + ++ + DV ++N++I G C A ELF +M+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
P+ T+N LI G D+AL++ K++E G R+V ++N+LI GF ++ +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CARSVITYNTLIDGFCKANKT 486
Query: 511 DKAMQIFRRMQFFQIAPNSVT 531
+A +IF M+ ++ NSVT
Sbjct: 487 REAEEIFDEMEVHGVSRNSVT 507
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 190/485 (39%), Gaps = 100/485 (20%)
Query: 28 FIASTRVHANSNYV-SMSIRSLPYPK--FMDAQLNQLCSNGPLSDAVAILDSLAEQGSKV 84
F RV N++ MS + +P + +N LC G + A+ I+D + ++G
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 85 RPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
TY ++S K G + EA +V D
Sbjct: 329 DVYTY----------------------------------NSVISGLCKLGEVKEAVEVLD 354
Query: 145 EMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
+M R N T++ +I +E EE +L + G LPD ++Q G C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ--GLCL 412
Query: 201 DLETGRLIHSVAI------RHGMCSSIRVN-NSIMAVYAKCGEMGFAKKLFKSMD----E 249
H VA+ R C N ++ G++ A + K M+
Sbjct: 413 TRN-----HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
R +T+N +I GFC+ +A + FD M+ GV VT+N LI + R + A L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
M +M G PD YT++S+++ F + G A D+++ M +G EP
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP-------------- 573
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV----YS 425
D++T +LI K G +E A ++ + + + ++
Sbjct: 574 ---------------------DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 426 WNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGYMQSGAE-DQALDLFKR 483
+N +I G +A LF +M + +++PP+ V++ + G G +A+D
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 484 IEKDG 488
+ + G
Sbjct: 673 LLEKG 677
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 162/360 (45%), Gaps = 15/360 (4%)
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM- 313
+ I+ ++G + +K + M+ E G T+ ILI SY Q D + ++ M
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR-KMLLSGVEPNSITVXXXXXXXXXXXX 372
+ FGL PD + ++ M++ G + +++ KM + G++P+ T
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSW-----N 427
+ LV D T +++ Y + GDL+ A RI + M E SW N
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVN 263
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDS-PPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
I+ G+C G A +M + D P+ T+N L+ G ++G A+++ + +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 487 DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
+G +V ++NS+I+G + G+ +A+++ +M +PN+VT +++ +
Sbjct: 324 EG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
+ E+ + ++ ++ N LI + N + +F+ + K D ++N+++
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/566 (22%), Positives = 241/566 (42%), Gaps = 52/566 (9%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET 124
G + +AV + + + + +Y ++ +D + +++ R+ G + P V +
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-ITPDVYS 148
Query: 125 KLVSMYSKC--GHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
+ M S C A ++ + M E N+ + ++G E E +LF M+
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G K+L+ K GD++ + I+ G+ ++ N + + GE+
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 239 FAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
A ++ + E+ D +T+N +I G C+N ++A Y M EG+EP T+N LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
A Y + G +A ++ G PD +T+ S+I G +G T AL L + L G++
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 355 PNSI-------------TVXXXXXXXXXXXXXXXXXEIHGIGV------KMSLVD----- 390
PN I + E+ + KM V
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 391 -----------DVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCH 435
D+ T N LI YS +E A I D+M + DVY++N+++ G C
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
E + M + PN+ T+N L+ + D+AL L + + K+ + +
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM-KNKSVNPDAV 567
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRM-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
++ +LI GF ++G D A +FR+M + ++++ ++ T I+ AF + +++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNL 580
+ R L + +++D + K+GN+
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNV 653
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 214/498 (42%), Gaps = 31/498 (6%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
L LC G + + +LD + ++G TY +Q R EL + +VG
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG------ELDGAVRMVGC 276
Query: 118 V-----NPFVETKLVSMYSKCGH--LSEAR----KVFDEMRERNLFTWSAMIGACSREKS 166
+ P V T +Y C + EA K+ +E E + +T++ +I +
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR--LIHSVAIRHGMCSSIRVN 224
+ + D V +GF+PD+F ++ G C + ET R + + A+ G+ ++ +
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIITGFCQNGDIEQARKYFDAMQE 280
N+++ + G + A +L M E+ + T+N ++ G C+ G + A M
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
+G P + T+NILI Y+ + + A++++ M G+ PDVYT++S+++G + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
++ + M+ G PN T + S+ D +T +LID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 401 MYSKCGDLEAAQRIFDMMYE-----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
+ K GDL+ A +F M E ++N II + A +LF +M D
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
P+ T+ ++ G+ ++G + + ++G I ++ + +I + +A
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP-SLTTLGRVINCLCVEDRVYEAAG 693
Query: 516 IFRRMQFFQIAPNSVTVL 533
I RM + P +V +
Sbjct: 694 IIHRMVQKGLVPEAVNTI 711
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 195/438 (44%), Gaps = 30/438 (6%)
Query: 188 LLPKILQACGKCGD--LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
LLPK + A KC ++ + +S+ G ++ S++ ++G+ K F+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIE------KLGYYGK-FE 57
Query: 246 SMDE-----RDSV-------TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
+M+E R++V + + + + G +++A F+ M EP + ++N +
Sbjct: 58 AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
++ G D A + +M G+TPDVY+++ + F + R + AL LL M G
Sbjct: 118 MSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
E N + E+ G + + + T N L+ + K GD++ ++
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 414 IFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
+ D + +R V +++N I G C G A + + + P+V+T+N LI G
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS 529
++ +A ++ +G ++ + ++N+LIAG+ + G A +I F P+
Sbjct: 298 KNSKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 530 VTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDG 589
T S++ + + + AL + + + + N LI + G ++ + ++ +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 590 LPLKDII----SWNIMLS 603
+ K +I ++NI+++
Sbjct: 417 MSEKGLIPEVQTFNILVN 434
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 12/285 (4%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+P + + +N LC G +SDA ++ + +G T+ L+ + +E E
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 108 LHARIGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGAC 161
+ + L V+P V T L++ K + + + M E+ NLFT++ ++ +
Sbjct: 483 I-LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSS 220
R + +E + L +M PD ++ K GDL+ L + + + SS
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFD 276
N I+ + + + A+KLF+ M +R D T+ ++ GFC+ G++ K+
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
M E G P L T +I R A ++ +M GL P+
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 198/450 (44%), Gaps = 72/450 (16%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREK-SWEEVVDLFYDMV 178
+ L+S Y + G EA VF+ M+E NL T++A+I AC + +++V F +M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R+G PD +L C + G E R + + + N+++ K G+M
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 239 FAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
A ++ M + + V+++ +I GF + G ++A F M+ G+ V++N L+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
+ Y ++GR + A+D++R+M S G+ DV T+++++ G+ ++G+ + +M V
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRI 414
PN +LT ++LID YSK G + A I
Sbjct: 512 PN-----------------------------------LLTYSTLIDGYSKGGLYKEAMEI 536
Query: 415 FDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQ 470
F DV ++ +I C G G A L +M PNVVT+N++I + +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 471 SGAEDQALD-------------LFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD--KAMQ 515
S D++ D L E +G R + + L KD + MQ
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSALTETEG--NRVIQLFGQLTTESNNRTTKDCEEGMQ 654
Query: 516 -------IFRRMQFFQIAPNSVTVLSILPA 538
+FR+M +I PN VT +IL A
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 182/363 (50%), Gaps = 12/363 (3%)
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
L ++ G+ G + + I A G +++ +++++ Y + G A +F SM
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 248 DER----DSVTWNAIITGFCQNGDIE--QARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
E + VT+NA+I C G +E Q K+FD MQ GV+P +T+N L+A ++ G
Sbjct: 295 KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
+ A +L +M + + DV+++++++ + G+ A ++L +M + + PN ++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM--- 418
+ G + + D ++ N+L+ +Y+K G E A I M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 419 -YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA 477
++DV ++N ++GGY G + ++F +M+ PN++T++ LI GY + G +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
+++F+ + G ++ +V +++LI ++G A+ + M I+PN VT SI+
Sbjct: 534 MEIFREFKSAG-LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 538 AFA 540
AF
Sbjct: 593 AFG 595
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 184/373 (49%), Gaps = 8/373 (2%)
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
FA K + +E+ + +A+I+ + G + A++ F+ G + ++ LI++Y
Sbjct: 221 FAVKRERRKNEQGKLA-SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYG 279
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL-DLLRKMLLSGVEPNS 357
+ G + A+ + M+ +GL P++ T++++I + G + + +M +GV+P+
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDM 417
IT + + DV + N+L+D K G ++ A I
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 418 MYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
M + +V S++T+I G+ AG +A LF +M+ + V++N L++ Y + G
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
++ALD+ + + G IK++V ++N+L+ G+ + G+ D+ ++F M+ + PN +T
Sbjct: 460 SEEALDILREMASVG-IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
+++ ++ K+ EI L +++ + + LID+ K+G + + + D + K
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-TK 577
Query: 594 DIISWNIMLSQEI 606
+ IS N++ I
Sbjct: 578 EGISPNVVTYNSI 590
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 184/419 (43%), Gaps = 34/419 (8%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID-----RDCIEVGRELHARIGLVGNV 118
+G +A+++ +S+ E G + +TY ++ +C + + E+ R G+ +
Sbjct: 281 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDR 339
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLF 174
F L+++ S+ G AR +FDEM E+++F+++ ++ A + + ++
Sbjct: 340 ITF--NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
M +P+ ++ K G + + G+ N+++++Y K
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 235 GEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G A + + M ++D VT+NA++ G+ + G ++ +K F M+ E V P L+T+
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
+ LI Y++ G A+++ R+ +S GL DV +S++I + G A+ L+ +M
Sbjct: 518 STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
G+ PN +T + G M D G SL S L
Sbjct: 578 EGISPNVVTY-------------NSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE 624
Query: 411 AQ--RIFDMMYERDVYSWNTIIGGYCHAGFCGKA--YELFMKMQDSDSPPNVVTWNALI 465
+ R+ + + S N C G + E+F KM + PNVVT++A++
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKD-CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 61 LCSNGPLSDAVA-ILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVN 119
+CS G L +A + D + + + +Y LL + +++ E+ A++ V +
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-VKRIM 406
Query: 120 PFV--ETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDL 173
P V + ++ ++K G EA +F EMR + +++ ++ ++ EE +D+
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
+M G D +L GK G + + + + R + ++ ++++ Y+K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 234 CGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G A ++F+ D V ++A+I C+NG + A D M +EG+ P +VT
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 290 WNILIASYNQLGRCDIAVD 308
+N +I ++ + D + D
Sbjct: 587 YNSIIDAFGRSATMDRSAD 605
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 209/453 (46%), Gaps = 18/453 (3%)
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNN 225
+ E +DLF MV LP K+L K + L + I G+ + N
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM-GVSHDLYTCN 111
Query: 226 SIMAVYAKCGE----MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+M + + + F K+ K E D VT+ ++I GFC +E+A + M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G++P +V + +I S + G + A+ L +ME++G+ PDV ++S+++G GR A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
LLR M ++P+ IT E++ ++MS+ ++ T SLI+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 402 YSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
+ G ++ A+++F +M + DV ++ ++I G+C A ++F +M N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+T+ LI G+ Q G + A ++F + G + N+ ++N L+ +G+ KA+ IF
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 518 RRMQFFQ---IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
MQ + +APN T +L +K + +R + I I+I
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 575 AKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
K+G + + +F LP K +++++ M+S
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 175/385 (45%), Gaps = 12/385 (3%)
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
E ++ T++++I EE + + MV G PD + I+ + K G +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFC 263
+ +G+ + + S++ G A L + M +R D +T+NA+I F
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ G A + ++ M + P + T+ LI + G D A + ME+ G PDV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
++S+I+GF + + A+ + +M G+ N+IT E+
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD-------VYSWNTIIGGYCHA 436
V + ++ T N L+ G ++ A IF+ M +R+ ++++N ++ G C+
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
G KA +F M+ + ++T+ +I G ++G A++LF + G +K NV +
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVT 497
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQ 521
+ ++I+G + G K +A +FR+M+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMK 522
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 194/447 (43%), Gaps = 51/447 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVG 116
+N C + A + L + + G + +T+ +L+ C+ E ++ + +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVD 172
+ + T ++ K GH++ A +FD+M ++ +++++ W +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
L M + PD ++ A K G +++ IR + +I S++ +
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
G + A+++F M+ + D V + ++I GFC+ ++ A K F M ++G+ +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL---L 345
T+ LI + Q+G+ ++A ++ M S G+ P++ T++ ++ G+ AL + +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+K + GV PN + T N L+
Sbjct: 414 QKREMDGVAPN-----------------------------------IWTYNVLLHGLCYN 438
Query: 406 GDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
G LE A +F+ M +R++ ++ II G C AG A LF + PNVVT+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDG 488
+I+G + G + +A LF+++++DG
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 163/375 (43%), Gaps = 11/375 (2%)
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+ F++ L S R + I+ + +A F M E P ++ + L+
Sbjct: 22 LSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNV 81
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
++ + D+ ++L ++ G++ D+YT + +++ F Q + Y A L KM+ G EP+
Sbjct: 82 IAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPD 141
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
+T + V+M + DV+ ++ID K G + A +FD
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 417 MM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
M DV + +++ G C++G A L M P+V+T+NALI +++ G
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
A +L+ + + I N+ ++ SLI GF G D+A Q+F M+ P+ V
Sbjct: 262 KFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 533 LSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD---- 588
S++ F +I ++ L LI + + G ++ +F
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 589 -GLPLKDIISWNIML 602
G+P +I ++N++L
Sbjct: 381 RGVP-PNIRTYNVLL 394
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 157/310 (50%), Gaps = 16/310 (5%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---ARIGL 114
+N LC++G DA ++L + ++ K IT+ L+ + + EL+ R+ +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEV 170
N+ F T L++ + G + EAR++F M + F ++++I + K ++
Sbjct: 279 APNI--FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ +FY+M + G + ++Q G+ G + + S + G+ +IR N ++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 231 YAKCGEMGFAKKLFKSMDER--DSV-----TWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
G++ A +F+ M +R D V T+N ++ G C NG +E+A F+ M++ +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
+ G++T+ I+I + G+ AV+L + S G+ P+V T+++MISG ++G + A
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 344 LLRKMLLSGV 353
L RKM GV
Sbjct: 517 LFRKMKEDGV 526
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 240/567 (42%), Gaps = 39/567 (6%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+P D ++ LC L DA ++L + G + TY L+ D + GR
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI------DGLLKGRN 327
Query: 108 LHARIGLVG-------NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSA 156
A GLV N+ P++ + + SK G + +A+ +FD M L +++
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 157 MIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG 216
+I REK+ + +L +M + + + +++ GDL+ I I G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQAR 272
++ + +++ + + G A ++ K M E+ D +N++I G + +++AR
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
+ M E G++P T+ I+ Y + A +++M G+ P+ + +I+ +
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 333 TQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
+KG+ A R M+ G+ ++ T EI + DV
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMK 448
+ LI+ +SK G+++ A IFD M E +V +N ++GG+C +G KA EL +
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
M PN VT+ +I GY +SG +A LF ++ G + + + +L+ G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLN 746
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEIS--- 565
++A+ IF + + + A N V E+ L R +
Sbjct: 747 DVERAITIFGTNK-----KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 566 -----VSNILIDSYAKSGNLMYSRRIF 587
NI+ID K GNL ++ +F
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELF 828
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 226/536 (42%), Gaps = 65/536 (12%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDR----DCIEVGRELHARIGLVG 116
+CS+G L A I+ + G + + Y L+++ + D + V +E+ + G+
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAP 485
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVD 172
++ F L+ SK + EAR EM E N FT+ A I +
Sbjct: 486 DI--FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+M G LP++ L ++ K G + + + G+ + +M
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
K ++ A+++F+ M + D ++ +I GF + G++++A FD M EEG+ P ++
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+N+L+ + + G + A +L+ +M GL P+ T+ ++I G+ + G A L +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
L G+ P+S I G K N+LI+ K G
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT 782
Query: 409 E----AAQRIFDMMYER-----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
E R+ D ++R DV ++N +I C G A ELF +MQ+++ P V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 460 TWNALITGY-----------------------------------MQSGAEDQAL----DL 480
T+ +L+ GY ++ G +AL +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
F + D K ++++ +L++GF + G+ + A ++ M Q P+S TV+ ++
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 211/487 (43%), Gaps = 56/487 (11%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ K L +A+ + EM + T+S +I + ++ + L ++MV HG
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
++ + K G +E + + I G+ + S++ Y + +
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 242 KLFKSMDERDSV----TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
+L M +R+ V T+ ++ G C +GD++ A M G P +V + LI ++
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
Q R A+ ++++M+ G+ PD++ ++S+I G ++ R A L +M+ +G++PN+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 358 IT----VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
T + E+ GV L + VL LI+ Y K G + A
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGV---LPNKVLC-TGLINEYCKKGKVIEACS 578
Query: 414 IFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
+ M ++ D ++ ++ G A E+F +M+ P+V ++ LI G+
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNS 529
+ G +A +F + ++G + NV +N L+ GF +SG+ +KA ++ M + PN+
Sbjct: 639 KLGNMQKASSIFDEMVEEG-LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 530 VTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDG 589
VT +I ID Y KSG+L + R+FD
Sbjct: 698 VTYCTI-----------------------------------IDGYCKSGDLAEAFRLFDE 722
Query: 590 LPLKDII 596
+ LK ++
Sbjct: 723 MKLKGLV 729
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 208/476 (43%), Gaps = 53/476 (11%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLF 174
N + T L+ + + +A +V EM+E+ ++F ++++I S+ K +E
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
+MV +G P+ F + + + + G+ + + ++ Y K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 235 GEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G++ A ++SM ++ D+ T+ ++ G +N ++ A + F M+ +G+ P + ++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
+LI +++LG A + +M GLTP+V ++ ++ GF + G A +LL +M +
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEA 410
G+ PN++T ++ID Y K GDL
Sbjct: 691 KGLHPNAVTYC-----------------------------------TIIDGYCKSGDLAE 715
Query: 411 AQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
A R+FD M + D + + T++ G C +A +F + +NALI
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALIN 774
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKR----NVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+ G + ++ R+ DG R N ++N +I + G + A ++F +MQ
Sbjct: 775 WVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
+ P +T S+L + + ++ + A+ + + + +++I+++ K G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 218/507 (42%), Gaps = 54/507 (10%)
Query: 134 GHLSEARKVFDEMRERN---LFTWSAMIGACSRE---KSWEEVV--DLFYDMVRHGFLPD 185
G +A V + M ERN WS+++ CS+E KS + V+ LF + G++ +
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIV-RCSQEFVGKSDDGVLFGILFDGYIAKGYIEE 169
Query: 186 EF----------LLPKI------LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
L+P++ L A + L+ ++ + + ++ + ++
Sbjct: 170 AVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLII 229
Query: 230 VYAKCGEMGFAKK-LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ + G + K LFK+ E + T N ++ A K ++M +G+ P
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLN-----------VDGALKLKESMICKGLVPLKY 278
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+++LI ++ R + A L+ +M+S G++ D +T+S +I G + A L+ +M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+ G+ + + L+ SLI+ Y + ++
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 409 EAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
+ M +R++ Y++ T++ G C +G AY + +M S PNVV + L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I ++Q+ A+ + K +++ G I ++ +NSLI G ++ + D+A M
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 525 IAPNSVTVLSILPAFAN----LVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+ PN+ T + + + A K VKE+ C + N V + LI+ Y K G +
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----LCTGLINEYCKKGKV 573
Query: 581 MYS----RRIFDGLPLKDIISWNIMLS 603
+ + R + D L D ++ ++++
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMN 600
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 202/438 (46%), Gaps = 19/438 (4%)
Query: 39 NYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID 98
+Y+ S P ++ +N +N + + + S+ + G + T+ +L++C
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 99 RDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAM 157
++G +LH+ + G N + T L+S+YS G L++A K+FDE+ +R++ TW+A+
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 158 IGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM 217
+ E +DLF MV G PD + + ++L AC GDL++G I M
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
+ V +++ +YAKCG+M A+ +F SM E+D VTW+ +I G+ N ++ + F
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
M +E ++P + ++S LG D+ + ++ +++ +++I + + G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
++ ++M E + + + + G K+ + D G++
Sbjct: 364 MARGFEVFKEM----KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD---GST 416
Query: 398 LIDMYSKC---GDLEAAQRIFDMM-----YERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
+ + C G ++ R F+ + +R V + ++ + AG AY L M
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 476
Query: 450 QDSDSPPNVVTWNALITG 467
PN + W AL++G
Sbjct: 477 P---MRPNAIVWGALLSG 491
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 201/505 (39%), Gaps = 124/505 (24%)
Query: 142 VFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
+F + N+F ++++I + E +DLF + +HG F P +L+AC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
+ G +HS+ + KCG D ++++
Sbjct: 127 RKLGIDLHSLVV-------------------KCGF------------NHDVAAMTSLLSI 155
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+ +G + A K FD + PD
Sbjct: 156 YSGSGRLNDAHKLFDEI-----------------------------------------PD 174
Query: 322 --VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
V TW+++ SG+T GR A+DL +KM+ GV+P+S + I
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
+M + + +L+++Y+KCG +E A+ +FD M E+D+ +W+T+I GY F
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 440 GKAYELFMKMQDSDSPP-----------------------------------NVVTWNAL 464
+ ELF++M + P N+ NAL
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
I Y + GA + ++FK ++ ++++ N+ I+G ++G + +F + +
Sbjct: 355 IDMYAKCGAMARGFEVFKEMK-----EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 525 IAPNSVTVLSILPA--FANLVAG--KKVKEIHCC-ALRRNLVSEISVSNILIDSYAKSGN 579
I+P+ T L +L A L+ + I C AL+R + ++D + ++G
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT----VEHYGCMVDLWGRAGM 465
Query: 580 LMYSRRIFDGLPLK-DIISWNIMLS 603
L + R+ +P++ + I W +LS
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLS 490
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 221/511 (43%), Gaps = 41/511 (8%)
Query: 39 NYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID 98
+YV S+P ++ L+ L + L DA + D + ++G V + L++ +
Sbjct: 158 DYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN 217
Query: 99 RDCIEVGREL-HARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAM 157
+EVGR+L R G N ++ Y K G + A VF E++ +
Sbjct: 218 EGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK-------- 269
Query: 158 IGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGRLIHSVAIRHG 216
GF+P ++ K GD + + RL+ V R
Sbjct: 270 -----------------------GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKK---LFKSMDERDSVTWNAIITGFCQNGDIEQARK 273
S +NN I A Y ++ A+ + + + D T+N +I C+ G E A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 274 YFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFT 333
+ D ++G+ P +++ LI +Y + DIA L+ +M G PD+ T+ +I G
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 334 QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
G A+++ K++ GV P++ + + +++ D
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKM 449
+LID + + GD + A+++F + E+ DV N +I G+C +G +A +M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
+ P+ T++ +I GY++ A+ +F+ +EK+ K K NV ++ SLI GF G
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN-KCKPNVVTYTSLINGFCCQGD 605
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
A + F+ MQ + PN VT +++ + A
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 195/440 (44%), Gaps = 10/440 (2%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
N F S+ + +R + + E+ D+ ++ L +L A + G L I+
Sbjct: 98 NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157
Query: 210 SVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQ 264
+ + + NS++++ K +G A+K++ M +R D+ + ++ G C
Sbjct: 158 DYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN 217
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
G +E RK + +G P +V +N +I Y +LG + A + ++++ G P + T
Sbjct: 218 EGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLET 277
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+ +MI+GF ++G + LL ++ G+ + + E G +
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCG 440
DV T N LI+ K G E A D ++ + S+ +I YC +
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
A +L ++M + P++VT+ LI G + SG D A+++ ++ G + + A +N L
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG-VSPDAAIYNML 456
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL 560
++G ++G+ A +F M I P++ +++ F + +++ ++ + +
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 561 VSEISVSNILIDSYAKSGNL 580
++ N +I + +SG L
Sbjct: 517 KVDVVHHNAMIKGFCRSGML 536
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/553 (22%), Positives = 219/553 (39%), Gaps = 67/553 (12%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+P + +N C G + +L + E+G +V + ++N + R +V
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS-VWFLNNIIDAKYRHGYKVDPA 330
Query: 108 LHARIGLVGNVNPFVETK--LVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGAC 161
+ + P V T L++ K G A DE ++ L +++ +I A
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSI 221
+ K ++ L M G PD ++ G ++ + I G+
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDA 277
+ N +M+ K G AK LF M +R D+ + +I GF ++GD ++ARK F
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
E+GV+ +V N +I + + G D A+ M +M L PD +T+S++I G+ ++
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
A+ + R M + +PN V+T S
Sbjct: 571 MATAIKIFRYMEKNKCKPN-----------------------------------VVTYTS 595
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERD----VYSWNTIIGGYC-HAGFCGKAYELFMKMQDS 452
LI+ + GD + A+ F M RD V ++ T+I + KA + M +
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 453 DSPPNVVTWNALITGYMQS--------------GAEDQALDLFKRIEKDGKIKRNVASWN 498
PN VT+N L+ G+++ G + F R++ DG + A++N
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG-WSDHAAAYN 714
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL-R 557
S + G A +M +P+ V+ +IL F + K+ + + C L
Sbjct: 715 SALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGE 774
Query: 558 RNLVSEISVSNIL 570
+ L + S +L
Sbjct: 775 KGLEVAVRYSQVL 787
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 188/388 (48%), Gaps = 13/388 (3%)
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM---DERDSV-TW 255
G LE S R + R N ++ +AK G+ K+ FK M R +V T+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
N +I C+ GD+E AR F+ M+ G+ P VT+N +I + ++GR D V +M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
PDV T++++I+ F + G+ L+ R+M +G++PN ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY----ERDVYSWNTIIG 431
+ + ++ LV + T SLID K G+L A R+ + M E +V ++ +I
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 432 GYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
G C A +A ELF KM + PN+ ++NALI G++++ D+AL+L ++ G IK
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IK 504
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEI 551
++ + + I G + + A + M+ I NS+ +++ A+ +G + +
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY--FKSGNPTEGL 562
Query: 552 HCCALRRNLVSEISVSN--ILIDSYAKS 577
H + L E++V +LID K+
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 193/458 (42%), Gaps = 47/458 (10%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L S+ G L EA + F +M+ +F + + ++ ++ ++V F DM+ G
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P F ++ K GD+E R + G+ NS++ + K G +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 242 KLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
F+ M E D +T+NA+I FC+ G + +++ M+ G++P +V+++ L+ ++
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
+ G A+ M GL P+ YT++S+I + G A L +ML GVE N
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL--------- 408
+T E+ G ++ ++ + N+LI + K ++
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 409 --------------------------EAAQRIFDMMYERDVYS----WNTIIGGYCHAGF 438
EAA+ + + M E + + + T++ Y +G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+ L +M++ D VVT+ LI G ++ +A+D F RI D ++ N A +
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
++I G + Q + A +F +M + P+ S++
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/533 (20%), Positives = 216/533 (40%), Gaps = 17/533 (3%)
Query: 45 IRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDC-IE 103
R P + + L++ G D + G++ TY N++ C+ ++ +E
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY-NIMIDCMCKEGDVE 279
Query: 104 VGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMI 158
R L + G V + ++ + K G L + F+EM+ E ++ T++A+I
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
+ ++ + +M +G P+ ++ A K G ++ + R G+
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKY 274
+ S++ K G + A +L M E + VT+ A+I G C +++A +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
F M GV P L ++N LI + + D A++L+ +++ G+ PD+ + + I G
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
+ A ++ +M G++ NS+ + ++ + V+T
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 395 GNSLIDMYSKCGDLEAAQRIF-----DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
LID K + A F D + + + +I G C A LF +M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
P+ + +L+ G + G +AL L ++ + G +K ++ ++ SL+ G Q
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG-MKLDLLAYTSLVWGLSHCNQ 698
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS 562
KA M I P+ V +S+L L + E+ ++ L++
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 751
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 163/385 (42%), Gaps = 48/385 (12%)
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
++A+ + G +E+A + F M+ V P + N L+ + +LG+ D + M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
G P V+T++ MI ++G A L +M G+ P+++T
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTI 429
M DV+T N+LI+ + K G L + M + +V S++T+
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 430 IGGYCHAGFCGKAYELFMKMQDSDSPP--------------------------------- 456
+ +C G +A + ++ M+ P
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 457 --NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
NVVT+ ALI G + +A +LF +++ G I N+AS+N+LI GF+++ D+A+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP-NLASYNALIHGFVKAKNMDRAL 492
Query: 515 QIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKV-KEIHCCALRRNLVSEISVSNIL 570
++ ++ I P+ + T + L + + A K V E+ C ++ N + + L
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL----IYTTL 548
Query: 571 IDSYAKSGNLMYSRRIFDGLPLKDI 595
+D+Y KSGN + D + DI
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDI 573
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 40/258 (15%)
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
PG ++ L + LG + A+ KM+ F + P + + ++ F + G+T
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+ M+ +G P V T N +ID K
Sbjct: 250 FKDMIGAGARPT-----------------------------------VFTYNIMIDCMCK 274
Query: 405 CGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
GD+EAA+ +F+ M R D ++N++I G+ G F +M+D P+V+T
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+NALI + + G L+ ++ ++ +G +K NV S+++L+ F + G +A++ + M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 521 QFFQIAPNSVTVLSILPA 538
+ + PN T S++ A
Sbjct: 394 RRVGLVPNEYTYTSLIDA 411
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 189/410 (46%), Gaps = 33/410 (8%)
Query: 142 VFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKILQACGKCG 200
VF+ + + W+ +I S + + E V + M+R G PDE+ P +++ C G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
+ G +H + +R G + V S + Y KC ++ A+K+F M ER++V+W A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 261 GFCQNGDIEQARKYFDAMQEEG-----------VEPG----------------LVTWNIL 293
+ ++G++E+A+ FD M E V+ G ++++ +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
I Y + G A DL E+ G+ DV WS++I G+ Q G+ A + +M V
Sbjct: 245 IDGYAKGGDMVSARDLFE--EARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHG-IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
+P+ + ++ + +M+ +LIDM +KCG ++ A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
++F+ M +RD+ S+ +++ G G +A LF KM D P+ V + ++ QS
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
++ L F+ + K I + ++ ++ ++G+ +A ++ + M F
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 32/312 (10%)
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV-EPNSITVXXXXXXXXXXXXXXXXX 377
+P Y W+ +I G++ K + + +L +M+ +G+ P+ T
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAG 437
+HG+ +++ DV+ G S +D Y KC DL +A+++F M ER+ SW ++ Y +G
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK----------D 487
+A +F M + N+ +WNAL+ G ++SG A LF + K D
Sbjct: 191 ELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMID 246
Query: 488 GKIKR----------------NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G K +V +W++LI G+ Q+GQ ++A ++F M + P+
Sbjct: 247 GYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFI 306
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRR-NLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
++ ++ A + + + +++ +R N S V LID AK G++ + ++F+ +
Sbjct: 307 MVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEM 366
Query: 591 PLKDIISWNIML 602
P +D++S+ M+
Sbjct: 367 PQRDLVSYCSMM 378
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 168/404 (41%), Gaps = 52/404 (12%)
Query: 69 DAVAILDSLAEQG-SKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVET 124
+ V+IL + G ++ T+ +++ C + + VG +H RIG +V V T
Sbjct: 92 ETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV--VVGT 149
Query: 125 KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLP 184
V Y KC L ARKVF EM ERN +W+A++ A + EE +F +P
Sbjct: 150 SFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF------DLMP 203
Query: 185 DEFL--LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
+ L ++ K GDL + + + + S S++ YAK G+M A+
Sbjct: 204 ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY----TSMIDGYAKGGDMVSARD 259
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
LF+ D W+A+I G+ QNG +A K F M + V+P L+++ +Q+G
Sbjct: 260 LFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGC 319
Query: 303 CDIAVDL-------MRKMESFGLTP-------------------------DVYTWSSMIS 330
++ + M K S + P D+ ++ SM+
Sbjct: 320 FELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMME 379
Query: 331 GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXE-IHGIGVKMSLV 389
G G A+ L KM+ G+ P+ + + K S++
Sbjct: 380 GMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSIL 439
Query: 390 DDVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTIIGG 432
+ ++++ S+ G L EA + I M +E +W +++GG
Sbjct: 440 ASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIE----VGRELHARIGLVGNVN 119
NG ++A + + + K + L+ +C C E V LH R+ +
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS-- 339
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
+V L+ M +KCGH+ A K+F+EM +R+L ++ +M+ + E + LF MV
Sbjct: 340 HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 180 HGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G +PDE IL+ CG+ +E G R + ++ + +S + I+ + ++ G++
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 239 FAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS- 296
A +L KSM E + W +++ G +G+ E A + E +EP +L+++
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE--LEPQSAGSYVLLSNI 517
Query: 297 YNQLGRCDIAVDLMRKMESFGLT 319
Y L R L KM G+T
Sbjct: 518 YAALDRWTDVAHLRDKMNENGIT 540
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 70/220 (31%)
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD-SPPNVVTWNALI-----TG 467
+F+ + Y WN +I GY + + + M+M + + P+ T+ ++ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 468 YMQSGAEDQALDLFKRIEKD-----------GKIK--------------RNVASWNSLIA 502
++ G+ L L +KD GK K RN SW +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 503 GFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVS 562
+++SG+ ++A +F ++P RNL S
Sbjct: 185 AYVKSGELEEAKSMF----------------DLMP-------------------ERNLGS 209
Query: 563 EISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
N L+D KSG+L+ ++++FD +P +DIIS+ M+
Sbjct: 210 ----WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMI 245
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 141/611 (23%), Positives = 246/611 (40%), Gaps = 99/611 (16%)
Query: 13 RPPLSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVA 72
RP L++ F+ + T S+ P+ D L G L +A
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSD-----------PRVFDVFFQVLVDFGLLREARR 196
Query: 73 ILDSLAEQGSKVRPITYMNLLQSCIDRDC------IEVGRELHARIGLVGNVNPFVETKL 126
+ + + G V + N+ + + +DC I V RE +G+ NV + +
Sbjct: 197 VFEKMLNYGL-VLSVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVGVCWNVASY--NIV 252
Query: 127 VSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ + G + EA + M + ++ ++S ++ R ++V L M R G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
P+ ++ I+ + L S IR G+ V +++ + K G++ A K
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 243 LFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
F M RD +T+ AII+GFCQ GD+ +A K F M +G+EP VT+ LI Y
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+ G A + M G +P+V T++++I G ++G A +LL +M G++PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-- 490
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
+ T NS+++ K G++E A ++
Sbjct: 491 ---------------------------------IFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 419 ----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
D ++ T++ YC +G KA E+ +M P +VT+N L+ G+ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLS 534
+ L + G I N ++NSL+ + A I++ M + P+ T
Sbjct: 578 EDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT--- 633
Query: 535 ILPAFANLVAGKKVKEIHCCALRRNLVS---------------EISVSNILIDSYAKSGN 579
+ NLV G HC A RN+ +S ++LI + K
Sbjct: 634 ----YENLVKG------HCKA--RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 580 LMYSRRIFDGL 590
+ +R +FD +
Sbjct: 682 FLEAREVFDQM 692
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 193/434 (44%), Gaps = 13/434 (2%)
Query: 174 FYDMVRHGFL---PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
F+D++ + + D + Q G L R + + +G+ S+ N +
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 231 YAK-CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+K C + A +F+ E + ++N +I CQ G I++A M+ +G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+++++ ++ Y + G D L+ M+ GL P+ Y + S+I + + A +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+M+ G+ P+++ + + DVLT ++I + +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 406 GDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
GD+ A ++F M+ E D ++ +I GYC AG A+ + M + PNVVT+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
LI G + G D A +L + K G ++ N+ ++NS++ G +SG ++A+++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 522 FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLM 581
+ ++VT +++ A+ K +EI L + L I N+L++ + G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 582 YSRRIFDGLPLKDI 595
++ + + K I
Sbjct: 579 DGEKLLNWMLAKGI 592
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 141/611 (23%), Positives = 246/611 (40%), Gaps = 99/611 (16%)
Query: 13 RPPLSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVA 72
RP L++ F+ + T S+ P+ D L G L +A
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSD-----------PRVFDVFFQVLVDFGLLREARR 196
Query: 73 ILDSLAEQGSKVRPITYMNLLQSCIDRDC------IEVGRELHARIGLVGNVNPFVETKL 126
+ + + G V + N+ + + +DC I V RE +G+ NV + +
Sbjct: 197 VFEKMLNYGL-VLSVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVGVCWNVASY--NIV 252
Query: 127 VSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ + G + EA + M + ++ ++S ++ R ++V L M R G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
P+ ++ I+ + L S IR G+ V +++ + K G++ A K
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 243 LFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
F M RD +T+ AII+GFCQ GD+ +A K F M +G+EP VT+ LI Y
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+ G A + M G +P+V T++++I G ++G A +LL +M G++PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-- 490
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
+ T NS+++ K G++E A ++
Sbjct: 491 ---------------------------------IFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 419 ----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE 474
D ++ T++ YC +G KA E+ +M P +VT+N L+ G+ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLS 534
+ L + G I N ++NSL+ + A I++ M + P+ T
Sbjct: 578 EDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT--- 633
Query: 535 ILPAFANLVAGKKVKEIHCCALRRNLVS---------------EISVSNILIDSYAKSGN 579
+ NLV G HC A RN+ +S ++LI + K
Sbjct: 634 ----YENLVKG------HCKA--RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 580 LMYSRRIFDGL 590
+ +R +FD +
Sbjct: 682 FLEAREVFDQM 692
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 193/434 (44%), Gaps = 13/434 (2%)
Query: 174 FYDMVRHGFL---PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
F+D++ + + D + Q G L R + + +G+ S+ N +
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 231 YAK-CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
+K C + A +F+ E + ++N +I CQ G I++A M+ +G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+++++ ++ Y + G D L+ M+ GL P+ Y + S+I + + A +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
+M+ G+ P+++ + + DVLT ++I + +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 406 GDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
GD+ A ++F M+ E D ++ +I GYC AG A+ + M + PNVVT+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
LI G + G D A +L + K G ++ N+ ++NS++ G +SG ++A+++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 522 FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLM 581
+ ++VT +++ A+ K +EI L + L I N+L++ + G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 582 YSRRIFDGLPLKDI 595
++ + + K I
Sbjct: 579 DGEKLLNWMLAKGI 592
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 183/382 (47%), Gaps = 10/382 (2%)
Query: 160 ACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCS 219
A +E +V ++ +M+R P+ F ++ A K G + R + +G
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 220 SIRVNNSIMAVYAKCG---EMGFAKKLFKSMDERDS----VTWNAIITGFCQNGDIEQAR 272
++ N+++ Y K G +M A + K M E D T+N +I GF ++ ++ +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
K F M ++ V+P ++++N LI G+ A+ + KM S G+ P++ T++++I+GF
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 333 TQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV 392
+ ALD+ + G P + + + +V DV
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 393 LTGNSLIDMYSKCGDLEAAQRIFDMMYER---DVYSWNTIIGGYCHAGFCGKAYELFMKM 449
T N LI + G++EAA+++FD + + D+ +++ ++ GYC G KA L +M
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
P +T+N ++ GY + G A ++ ++EK+ +++ NVAS+N L+ G+ Q G+
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 510 KDKAMQIFRRMQFFQIAPNSVT 531
+ A + M + PN +T
Sbjct: 557 LEDANMLLNEMLEKGLVPNRIT 578
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 182/415 (43%), Gaps = 93/415 (22%)
Query: 208 IHSVAIRHGMCSSIRVNNSI--MAVYAKCG----EMGFAKKLFKSMD----ERDSVTWNA 257
+HS+ MC ++ VN+ I M V A E+GF + FK + +++
Sbjct: 136 VHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGF--EAFKRSGYYGYKLSALSCKP 193
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG 317
++ + + M ++P + T+N++I + + G+ + A D+M M+ +G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 318 LTPDVYTWSSMISGFTQ---KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
+P+V +++++I G+ + G+ Y A +L++M+ + V PN
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN------------------ 295
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDV----YSWNTII 430
+ T N LID + K +L + ++F M ++DV S+N++I
Sbjct: 296 -----------------LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
G C+ G +A + KM + PN++T+NALI G+ ++ +ALD+F ++ G +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+N LI + + G+ D + M+
Sbjct: 399 P-TTRMYNMLIDAYCKLGKIDDGFALKEEME----------------------------- 428
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP---LKDIISWNIML 602
R +V ++ N LI ++GN+ ++++FD L L D+++++I++
Sbjct: 429 ------REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILM 477
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 154/349 (44%), Gaps = 47/349 (13%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNL-------------------LQSCID 98
+N LC G ++ A +++ + G ++Y L L+ ++
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
Query: 99 RDCIEVGRELHARI-------GLVGNVNPFVE-------------TKLVSMYSKCGHLSE 138
D + I L G++ F E L++ G +SE
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 139 ARKVFDEM----RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ 194
A + D+M + NL T++A+I + +E +D+F + G +P + ++
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 195 ACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER---D 251
A K G ++ G + R G+ + N ++A + G + AKKLF + + D
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD 469
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
VT++ ++ G+C+ G+ +A M + G++P +T+NI++ Y + G A ++
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 312 KME-SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+ME L +V +++ ++ G++QKG+ A LL +ML G+ PN IT
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 169/370 (45%), Gaps = 39/370 (10%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMI-GACS---------RE 164
N F +++ K G +++AR V ++M+ N+ +++ +I G C +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 165 KSWEEVVD-------LFYDMVRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHG 216
+E+V+ ++++ GF D+ L P ++ + D + +I ++ +G
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNL-PGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFD 276
+C+ +++ +I K+ + + + +T+NA+I GFC+N +++A F
Sbjct: 341 LCNGGKISEAI----------SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
+++ +G P +N+LI +Y +LG+ D L +ME G+ PDV T++ +I+G + G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
A L ++ G+ P+ +T + KM L LT N
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYER-----DVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
++ Y K G+L+AA + M + +V S+N ++ GY G A L +M +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 452 SDSPPNVVTW 461
PN +T+
Sbjct: 570 KGLVPNRITY 579
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 58/317 (18%)
Query: 60 QLCSNGPLSDAVAILDSLAEQGSKVRP-ITYMNLLQSCIDRD-----CIEVGRELHARIG 113
+L NG + A A+L + E + V P +T N+L +D ++V +E+
Sbjct: 270 KLGGNGKMYKADAVLKEMVE--NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM----- 322
Query: 114 LVGNVNPFV--ETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
L +V P V L++ G +SEA + D+M + NL T++A+I +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+E +D+F + G +P + ++ A K G ++ G + R G+ + N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 228 MAVYAKCGEMGFAKKLFKSMDER---DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+A + G + AKKLF + + D VT++ ++ G+C+ G+ +A M + G++
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 285 PGLVTWNI------------------------------------LIASYNQLGRCDIAVD 308
P +T+NI L+ Y+Q G+ + A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 309 LMRKMESFGLTPDVYTW 325
L+ +M GL P+ T+
Sbjct: 563 LLNEMLEKGLVPNRITY 579
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
++ +N LC+ G +S+A+++ D + G + ITY L+ D ++ ++ +
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 115 VGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEE 169
G V + L+ Y K G + + + +EM + T++ +I R + E
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
LF + G LPD +++ + G+ ++ + G+ N +M
Sbjct: 455 AKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 230 VYAKCGEMGFAKKLFKSMDER-----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
Y K G + A + M++ + ++N ++ G+ Q G +E A + M E+G+
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 285 PGLVTWNIL 293
P +T+ I+
Sbjct: 574 PNRITYEIV 582
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 227/530 (42%), Gaps = 37/530 (6%)
Query: 34 VHANSNYVSMSIRSLPYPKFMD--AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMN 91
V + YVS + + P F + + C L A + + + +G + + Y +
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 92 LLQS-CIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCG--HLSEARKVFDEMRE 148
L+ C+ R I+ +L ++ P V T V + S CG SEA + EM E
Sbjct: 294 LIHGLCVARR-IDEAMDLFVKMK-DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 149 R----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
N+ T++ +I + + +E+ +L M+ G +P+ ++ K G +E
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG---EMGFAKKLFKSMDERDSVTWNAIITG 261
+ + + + R N ++ Y K MG K+ + D VT+N++I G
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
C++G+ + A + M + G+ P T+ +I S + R + A DL +E G+ P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V ++++I G+ + G+ A +L KML PNS+T +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAG 437
VK+ L V T LI K GD + A F M + D +++ T I YC G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A ++ KM+++ P++ T+++LI GY G + A D+ KR+ +D + + ++
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTF 710
Query: 498 NSLIAGFL------QSGQK------------DKAMQIFRRMQFFQIAPNS 529
SLI L Q G + D +++ +M + PN+
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 198/440 (45%), Gaps = 28/440 (6%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMI-GACSREKSWEEVVDL 173
N + K+V+ Y K G++ EA + ++ E L FT++++I G C R K + +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR-KDLDSAFKV 275
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHS-----VAIRHGMC-SSIRVNNSI 227
F +M G +E ++ G C R I V ++ C ++R +
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIH--GLC----VARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ A L K M+E + T+ +I C E+AR+ M E+G+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P ++T+N LI Y + G + AVD++ MES L+P+ T++ +I G+ K + A+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMG 448
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+L KML V P+ +T + + LV D T S+ID
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 404 KCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K +E A +FD + ++ +V + +I GYC AG +A+ + KM + PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+NALI G G +A L +++ K G ++ V++ LI L+ G D A F++
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 520 MQFFQIAPNSVTVLSILPAF 539
M P++ T + + +
Sbjct: 628 MLSSGTKPDAHTYTTFIQTY 647
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 192/444 (43%), Gaps = 90/444 (20%)
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSV-----TWNAIITGFCQNGDIEQARKYFDAMQ 279
N+++ A+ G + K+++ M E D V T+N ++ G+C+ G++E+A +Y +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLE-DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 280 EEGVEPGLVTWNILIASYNQLG-----------------------------------RCD 304
E G++P T+ LI Y Q R D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
A+DL KM+ P V T++ +I R AL+L+++M +G++PN T
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER--- 421
E+ G ++ L+ +V+T N+LI+ Y K G +E A + ++M R
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 422 -DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED----- 475
+ ++N +I GYC + KA + KM + P+VVT+N+LI G +SG D
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 476 ------------------------------QALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
+A DLF +E+ G + NV + +LI G+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVMYTALIDGYC 543
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE---IHCCALRRNLVS 562
++G+ D+A + +M PNS+T +++ L A K+KE + ++ L
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG---LCADGKLKEATLLEEKMVKIGLQP 600
Query: 563 EISVSNILIDSYAKSGNL--MYSR 584
+S ILI K G+ YSR
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSR 624
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 40/362 (11%)
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME 314
+N ++ + G +++ ++ + M E+ V P + T+N ++ Y +LG + A + K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXX 374
GL PD +T++S+I G+ Q+ A + +M L G N +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL----------- 294
Query: 375 XXXEIHGIGVK----------MSLVDD-----VLTGNSLIDMYSKCGD------LEAAQR 413
IHG+ V + + DD V T LI S CG L +
Sbjct: 295 ----IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK--SLCGSERKSEALNLVKE 348
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
+ + + +++++ +I C KA EL +M + PNV+T+NALI GY + G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 474 EDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVL 533
+ A+D+ + +E K+ N ++N LI G+ +S KAM + +M ++ P+ VT
Sbjct: 409 IEDAVDVVELMESR-KLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYN 466
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
S++ + R LV + +IDS KS + + +FD L K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 594 DI 595
+
Sbjct: 527 GV 528
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 193/523 (36%), Gaps = 119/523 (22%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+A +N C G + DAV +++ + + TY L++ + +H +G+
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-------VHKAMGV 449
Query: 115 VGN-----VNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSR 163
+ V P V T L+ + G+ A ++ M +R L +T+++MI + +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSV------------ 211
K EE DLF + + G P+ + ++ K G ++ L+
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 212 --AIRHGMCS---------------------SIRVNNSIMAVYAKCGEMGFAKKLFKSM- 247
A+ HG+C+ ++ + ++ K G+ A F+ M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 248 ---DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD 304
+ D+ T+ I +C+ G + A M+E GV P L T++ LI Y LG+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGF------TQKGRTYH------------ALDLLR 346
A D++++M G P +T+ S+I QKG ++LL
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 347 KMLLSGVEPNS---------------ITVXXXXXXXXXXXXXXXXXEI------------ 379
KM+ V PN+ + V E+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 380 --HGIGVKMSLVDDVLTGNSLIDMYS---------KCGDLEAAQRIFDMM----YERDVY 424
H K +VDD++ L + S K G+ E +F + Y D
Sbjct: 810 KKHNEAAK--VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
+W II G G YELF M+ + + T++ LI G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
C + +R F++ Y+ + +NT++ G + +++M+M + PN+ T+N +
Sbjct: 166 CRKMNKDER-FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ GY + G ++A +I + G + + ++ SLI G+ Q D A ++F M
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAG-LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 525 IAPNSVTVLSILPAFANLVAG 545
N V A+ +L+ G
Sbjct: 284 CRRNEV-------AYTHLIHG 297
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 50/356 (14%)
Query: 43 MSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI 102
+S LP +A ++ LC++G L +A + + + + G LQ + D I
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG-----------LQPTVSTDTI 607
Query: 103 EVGREL------HA----RIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRER- 149
+ R L HA + L P T + Y + G L +A + +MRE
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 150 ---NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEF----LLPKILQA------- 195
+LFT+S++I D+ M G P + L+ +L+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 196 -----CGKCGDLETGRLIHSVA--IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
C +E ++ + + H + + + ++ + G + A+K+F M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 249 ERDSVT-----WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRC 303
+ ++ +NA+++ C+ +A K D M G P L + +LI + G
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 304 DIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+ + + + G D W +I G ++G +L M +G + +S T
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 187/420 (44%), Gaps = 9/420 (2%)
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMCSSIR 222
+ + +DLF MV LP ++L K + + + I +C+
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
V + + C F K+ K E D VT+ +++ G+C IE A FD + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
+P +VT+ LI + + AV+L +M + G P+V T++++++G + GR A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMY 402
LLR M+ +EPN IT E++ + ++MS+ DV T SLI+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 403 SKCGDLEAAQRIFDMMYERDVYS----WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNV 458
G L+ A+++F +M Y + T+I G+C + ++F +M N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
+T+ LI GY G D A ++F ++ + ++ ++N L+ G +G+ +KA+ IF
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 519 RMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSG 578
M+ ++ N VT I+ L + ++ C + + + +I + + G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 9/360 (2%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M++ GF PD +L +E + + G ++ +++ K
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 237 MGFAKKLFKSMDERDS----VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
+ A +LF M S VT+NA++TG C+ G A M + +EP ++T+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI ++ ++G+ A +L M + PDV+T+ S+I+G G A + M +G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
PN + +I + +V + +T LI Y G + AQ
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 413 RIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
+F+ M R D+ ++N ++ G C G KA +F M+ + N+VT+ +I G
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ G + A DLF + G +K NV ++ ++I+GF + G +A +F++M+ PN
Sbjct: 444 CKLGKVEDAFDLFCSLFSKG-MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 153/308 (49%), Gaps = 15/308 (4%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID----RDCIEVGRELHARIGLVG 116
LC N L+ AV + + + GS+ +TY L+ + D + R++ R +
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEP 256
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVD 172
NV F T L+ + K G L EA+++++ M + ++FT+ ++I +E
Sbjct: 257 NVITF--TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+FY M R+G P+E + ++ K +E G I + G+ ++ ++ Y
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
G A+++F M R D T+N ++ G C NG +E+A F+ M++ ++ +V
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+ I+I +LG+ + A DL + S G+ P+V T+++MISGF ++G + A L +KM
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 349 LLSGVEPN 356
G PN
Sbjct: 495 KEDGFLPN 502
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 156/349 (44%), Gaps = 8/349 (2%)
Query: 148 ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL 207
E +L T+++++ E+ + LF ++ GF P+ +++ K L
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 208 IHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFC 263
+ + +G ++ N+++ + G G A L + M +R + +T+ A+I F
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
+ G + +A++ ++ M + V P + T+ LI G D A + ME G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
++++I GF + R + + +M GV N+IT E+
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD----VYSWNTIIGGYCHAGFC 439
D+ T N L+D G +E A IF+ M +R+ + ++ II G C G
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
A++LF + PNV+T+ +I+G+ + G +A LFK++++DG
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 175/413 (42%), Gaps = 48/413 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARI-GLVG 116
++ +C + A L + + G + +T+ +LL + IE L +I G+
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 117 NVNPFVETKLVSMYSKCGHLSEARKVFDEM----RERNLFTWSAMIGACSREKSWEEVVD 172
N T L+ K HL+ A ++F++M N+ T++A++ W +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
L DM++ P+ ++ A K G L + +++V I+ + + S++
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
G + A+++F M+ + V + +I GFC++ +E K F M ++GV +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+ +LI Y +GR D+A ++ +M S PD+ T++ ++ G G+ AL + M
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
++ N ++T +I K G +
Sbjct: 425 RKREMDIN-----------------------------------IVTYTIIIQGMCKLGKV 449
Query: 409 EAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
E A +F ++ + +V ++ T+I G+C G +A LF KM++ PN
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 149/361 (41%), Gaps = 9/361 (2%)
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
R ++ I+ N A F M P ++ + L++ ++ R D+ + L
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
+M+ G+ P + T + ++ + A L KM+ G EP+ +T
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYS 425
+ + M +V+T +LI K L A +F+ M +V +
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+N ++ G C G G A L M PNV+T+ ALI +++ G +A +L+ +
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN-VM 284
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+ +V ++ SLI G G D+A Q+F M+ PN V +++ F
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIM 601
+ +I ++ +V+ +LI Y G ++ +F+ + + DI ++N++
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 602 L 602
L
Sbjct: 405 L 405
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 60/472 (12%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N LC G + +A A+++ + +G + +TY ++ + L +++ +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET-H 291
Query: 118 VNP--FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMI-GACSREKSWEEV 170
+ P + + ++ K GH S+A+ +F EM E+ N+FT++ MI G CS + W +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR-WSDA 350
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
L DM+ PD + N++++
Sbjct: 351 QRLLRDMIEREINPD-----------------------------------VLTFNALISA 375
Query: 231 YAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
K G++ A+KL M R D+VT+N++I GFC++ + A+ FD M P
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPD 431
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+VT+N +I Y + R D + L+R++ GL + T++++I GF + A DL +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLIDMYSKC 405
+M+ GV P++IT E+ + ++MS +D D + N +I K
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEV-IQMSKIDLDTVAYNIIIHGMCKG 550
Query: 406 GDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
++ A +F + E DV ++N +I G+C A LF KM+D+ P+ T+
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
N LI G +++G D++++L + +G A ++A + G+ DK+
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNG--FSGDAFTIKMVADLITDGRLDKS 660
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 198/442 (44%), Gaps = 34/442 (7%)
Query: 126 LVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ + C LS + F ++ + ++ T++ ++ E E + LF MV G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 182 FLPDEFLLPKILQA----------------CGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
FL L ++++ C + LE L++ + + G+ +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVTYG 265
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+I+ K G+ A L M+E D V ++AII C++G A+ F M E+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G+ P + T+N +I + GR A L+R M + PDV T++++IS ++G+ + A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
L +ML + P+++T + + DV+T N++ID+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 402 YSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
Y + ++ ++ + R + ++NT+I G+C A +LF +M P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+T N L+ G+ ++ ++AL+LF+ I+ KI + ++N +I G + + D+A +F
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 518 RRMQFFQIAPNSVTVLSILPAF 539
+ + P+ T ++ F
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGF 582
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 23/318 (7%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA----R 111
A +++LC +G SDA + + E+G TY +C+ GR A R
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY-----NCMIDGFCSFGRWSDAQRLLR 355
Query: 112 IGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREK 165
+ +NP V T L+S K G L EA K+ DEM R +F T+++MI +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
+++ +F M PD I+ + ++ G + R G+ ++ N
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+++ + + + A+ LF+ M D++T N ++ GFC+N +E+A + F+ +Q
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
++ V +NI+I + + D A DL + G+ PDV T++ MISGF K A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 342 LDLLRKMLLSGVEPNSIT 359
L KM +G EP++ T
Sbjct: 592 NVLFHKMKDNGHEPDNST 609
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 24/356 (6%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
++ A +FD M V N +I + ++ R D+A+ L RKME + ++Y+++
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I F + +L K+ G +P+ +T + G V+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 388 LVDD---------------VLTGNSLIDMYSKCGD-LEAAQRIFDMM---YERDVYSWNT 428
++ V+T N+LI+ G LEAA + M+ DV ++ T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
I+ G C G A L KM+++ P+VV ++A+I + G A LF + + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I NV ++N +I GF G+ A ++ R M +I P+ +T +++ A++ GK
Sbjct: 327 -IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS--ASVKEGKLF 383
Query: 549 KEIHCC--ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ C L R + + N +I + K ++ +FD + D++++N ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 145/312 (46%), Gaps = 7/312 (2%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+ ++ CS G SDA +L + E+ +T+ L+ + + + +L + L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-L 393
Query: 115 VGNVNPFVETKLVSMYSKCGH--LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
+ P T +Y C H +A+ +FD M ++ T++ +I R K +E +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
L ++ R G + + ++ + +L + + I HG+C N ++ +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 233 KCGEMGFAKKLFK----SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ ++ A +LF+ S + D+V +N II G C+ +++A F ++ GVEP +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+N++I+ + A L KM+ G PD T++++I G + G +++L+ +M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 349 LLSGVEPNSITV 360
+G ++ T+
Sbjct: 634 RSNGFSGDAFTI 645
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 215/494 (43%), Gaps = 39/494 (7%)
Query: 90 MNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
+N L+SC RD +EV R +H + G + + F +KL++ +S + A +F+ +
Sbjct: 32 INDLRSC--RDTVEVSR-IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSN 87
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
NLF ++ MI S E +F + G D F L++C + + G +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER-DSVTWNAIITGFCQNGD 267
H +A+R G + N+++ Y CG++ A+K+F M + D+VT++ ++ G+ Q
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD-----------IAVDL------- 309
A F M++ V + T +++ + LG I +DL
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 310 -------------MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
R++ + DV TW+ MI + + G + LLR+M ++PN
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
S T + + + + D + G +L+DMY+K G LE A IF+
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 417 MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP--PNVVTWNALITGYMQSGAE 474
M ++DV SW +I GY G +A LF KM++ + PN +T+ ++ G
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLS 534
+ + FKR+ + V + ++ ++GQ ++A ++ R + + +L+
Sbjct: 448 MEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLA 507
Query: 535 ILPAFANLVAGKKV 548
+ N G+ V
Sbjct: 508 ACRVYGNADLGESV 521
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 45/330 (13%)
Query: 70 AVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETK--LV 127
A ++ + L +G + +++ L+SC C+ +G LH I L F + + L+
Sbjct: 109 AFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHG-IALRSGFMVFTDLRNALI 167
Query: 128 SMYSKCGHLSEARKVFDEMRER-NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDE 186
Y CG +S+ARKVFDEM + + T+S ++ + +DLF M + + +
Sbjct: 168 HFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNV 227
Query: 187 FLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS 246
L L A GDL H + I+ G+ + + +++ +Y K G + A+++F
Sbjct: 228 STLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDC 287
Query: 247 MDERDSVTWNAIITGFCQNGDIEQ-----------------------------------A 271
+D VTWN +I + + G +E+
Sbjct: 288 AIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG 347
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
R D ++EE + + L+ Y ++G + AV++ +M+ DV +W++MISG
Sbjct: 348 RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD----KDVKSWTAMISG 403
Query: 332 FTQKGRTYHALDLLRKMLLSG--VEPNSIT 359
+ G A+ L KM V PN IT
Sbjct: 404 YGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 127/265 (47%), Gaps = 5/265 (1%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
+++++ + D E L +IGL +++ + T L+ MY K G +S AR++FD
Sbjct: 231 LSFLSAISDLGDLSGAESAHVLCIKIGL--DLDLHLITALIGMYGKTGGISSARRIFDCA 288
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
+++ TW+ MI ++ EE V L M P+ +L +C GR
Sbjct: 289 IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
+ + + + +++ +YAK G + A ++F M ++D +W A+I+G+ +G
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 267 DIEQARKYFDAMQEEG--VEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVY 323
+A F+ M+EE V P +T+ +++ + + G + ++M E++ TP V
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVE 468
Query: 324 TWSSMISGFTQKGRTYHALDLLRKM 348
+ ++ + G+ A +L+R +
Sbjct: 469 HYGCVVDLLGRAGQLEEAYELIRNL 493
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 41/320 (12%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
+++ +++MI G++ A + ++ G+ + + +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTIIGGYCHAGF 438
HGI ++ + N+LI Y CG + A+++FD M + D +++T++ GY
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 439 CGKAYELFMKMQDSDSPPNVVTW-----------------------------------NA 463
A +LF M+ S+ NV T A
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
LI Y ++G A +F D I+++V +WN +I + ++G ++ + + R+M++
Sbjct: 268 LIGMYGKTGGISSARRIF-----DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
++ PNS T + +L + A A + + + + + L+D YAK G L +
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 584 RRIFDGLPLKDIISWNIMLS 603
IF+ + KD+ SW M+S
Sbjct: 383 VEIFNRMKDKDVKSWTAMIS 402
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
IHG VK L D + L+ +S D+ A IF+ + +++ +NT+I GY +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 439 CGKAYELFMKMQDS----DSPPNVVTW-------------------------------NA 463
+A+ +F +++ D + T NA
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
LI Y G A +F + + + ++++L+ G+LQ +K A+ +FR M+
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQ----SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
++ N T+LS L A ++L + H ++ L ++ + LI Y K+G + +
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 584 RRIFDGLPLKDIISWNIMLSQ 604
RRIFD KD+++WN M+ Q
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQ 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL-----H 109
+ ++Q G L + V +L + + K T++ LL SC + VGR +
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 110 ARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
RI L + + T LV MY+K G L +A ++F+ M+++++ +W+AMI E
Sbjct: 357 ERIAL----DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLARE 412
Query: 170 VVDLFYDMVRHG--FLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNS 226
V LF M P+E +L AC G + G R + + +
Sbjct: 413 AVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGC 472
Query: 227 IMAVYAKCGEMGFAKKLFKSMD-ERDSVTWNAIITG 261
++ + + G++ A +L +++ DS W A++
Sbjct: 473 VVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 214/500 (42%), Gaps = 54/500 (10%)
Query: 41 VSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPIT---YMNLLQSCI 97
+S + SLP P D++ L P +D + S +GS + P Y LL+ C
Sbjct: 15 LSRRLNSLPAPVSEDSEDESL--KFPSNDLLLRTSSNDLEGSYI-PADRRFYNTLLKKCT 71
Query: 98 DRDCIEVGRELHARI-GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSA 156
+ GR +HA I + + + L++MY+KCG L EARKVF++M +R+ TW+
Sbjct: 72 VFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTT 131
Query: 157 MIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG 216
+I S+ + + F M+R G+ P+EF L +++A G +H ++ G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFD 276
S++ V ++++ +Y + G M A+ +F +++ R+ V+WNA+I G + E+A + F
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 277 AMQEEGVEPGLVTW-----------------------------------NILIASYNQLG 301
M +G P ++ N L+ Y + G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVX 361
A + ++ DV +W+S+++ + Q G A+ +M G+ PN I+
Sbjct: 312 SIHDARKIFDRLAK----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 362 XXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR-IFDMMYE 420
+ + K +V + +++D+ + GDL A R I +M E
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 421 RDVYSWNTIIGG---YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA 477
W ++ + + A E ++ D P+V+ +N +G G + A
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG----GRWNDA 483
Query: 478 LDLFKRIEKDGKIKRNVASW 497
+ K++++ G K SW
Sbjct: 484 ARVRKKMKESGVKKEPACSW 503
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 180/391 (46%), Gaps = 40/391 (10%)
Query: 182 FLP-DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
++P D +L+ C L GR++H+ ++ I + N+++ +YAKCG + A
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI--ASYN 298
+K+F+ M +RD VTW +I+G+ Q+ A +F+ M G P T + +I A+
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 299 QLGRC-----------------DIAVDLMRKMESFGLTPDV------------YTWSSMI 329
+ G C + L+ +GL D +W+++I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
+G ++ T AL+L + ML G P+ + +H +K
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
GN+L+DMY+K G + A++IFD + +RDV SWN+++ Y GF +A F +M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN--SLIAGFLQS 507
+ PN +++ +++T SG D+ ++ ++KDG + +W+ +++ ++
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE---AWHYVTVVDLLGRA 411
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
G ++A++ M I P + ++L A
Sbjct: 412 GDLNRALRFIEEM---PIEPTAAIWKALLNA 439
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 39/350 (11%)
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+V N L+ Y + G + A + KM D TW+++ISG++Q R AL
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQ----RDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
+ML G PN T+ ++HG VK +V G++L+D+Y++ G
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 407 DLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI- 465
++ AQ +FD + R+ SWN +I G+ KA ELF M P+ ++ +L
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 466 ----TGYMQSG-----------------AEDQALDLFKR---IEKDGKI-----KRNVAS 496
TG+++ G A + LD++ + I KI KR+V S
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
WNSL+ + Q G +A+ F M+ I PN ++ LS+L A ++ +G + H L
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH--SGLLDEGWHYYEL 388
Query: 557 RRN--LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS-WNIMLS 603
+ +V E ++D ++G+L + R + +P++ + W +L+
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
++V N L+ Y + G+ ++A +F+++ + R+ +W +LI+G+ Q + A+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQ-----RDFVTWTTLISGYSQHDRPCDALLF 148
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
F +M F +PN T+ S++ A A G ++H ++ S + V + L+D Y +
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
G + ++ +FD L ++ +SWN +++
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIA 235
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 140/259 (54%), Gaps = 11/259 (4%)
Query: 104 VGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA 160
+G+ELH+ R+G VG+ F E+ +++Y K G ARKVFDE ER L +W+A+IG
Sbjct: 135 LGKELHSVAVRLGFVGD--EFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG 192
Query: 161 CSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM--C 218
+ E V++F DM R G PD+F + + +CG GDL +H ++
Sbjct: 193 LNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK 252
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
S I + NS++ +Y KCG M A +F+ M +R+ V+W+++I G+ NG+ +A + F M
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGR 337
+E GV P +T+ ++++ G + M+S F L P + + ++ ++ G+
Sbjct: 313 REFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 338 TYHALDLLRKMLLSGVEPN 356
A ++ +M + +PN
Sbjct: 373 LKEAKKVVEEMPM---KPN 388
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 79/404 (19%)
Query: 126 LVSMYSKCGHLSEARKVF-DEMRERNL------FTWSAMIGACSREKSWEEVVDLFYDMV 178
L ++ S C L+ R++ D R R L F W+ ++ + R +S + + ++ MV
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R LPD + LP +++A + D G+ +HSVA+R G
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVG------------------- 150
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
D + IT +C+ G+ E ARK FD E
Sbjct: 151 ------------DEFCESGFITLYCKAGEFENARKVFDENPE------------------ 180
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
RK+ S W+++I G GR A+++ M SG+EP+
Sbjct: 181 ------------RKLGS---------WNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDF 219
Query: 359 TVXXXXXXXXXXXXXXXXXEIHG--IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
T+ ++H + K D++ NSLIDMY KCG ++ A IF+
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 417 MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQ 476
M +R+V SW+++I GY G +A E F +M++ PN +T+ +++ + G ++
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
F ++ + +++ ++ + ++ + GQ +A ++ M
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 149/325 (45%), Gaps = 50/325 (15%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
P + W++++ + + A+ + M+ S V P+ ++ E+
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H + V++ V D + I +Y K G+ E A+++FD ER + SWN IIGG HAG
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 440 GKAYELFMKMQDSDSPPN-------------------------------------VVTWN 462
+A E+F+ M+ S P+ ++ N
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+LI Y + G D A +F+ + + RNV SW+S+I G+ +G +A++ FR+M+
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQ-----RNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKE--IHCCALRRNLVSEISVSNI--LIDSYAKSG 578
F + PN +T + +L A V G V+E + ++ E +S+ ++D ++ G
Sbjct: 315 FGVRPNKITFVGVLSA---CVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDG 371
Query: 579 NLMYSRRIFDGLPLK-DIISWNIML 602
L ++++ + +P+K +++ W ++
Sbjct: 372 QLKEAKKVVEEMPMKPNVMVWGCLM 396
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 207/447 (46%), Gaps = 58/447 (12%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N LC G + +A A+++ + +G + +TY ++ + L +++ +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET-H 291
Query: 118 VNP--FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMI-GACSREKSWEEV 170
+ P + + ++ K GH S+A+ +F EM E+ N+FT++ MI G CS + W +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR-WSDA 350
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
L DM+ PD + N++++
Sbjct: 351 QRLLRDMIEREINPD-----------------------------------VLTFNALISA 375
Query: 231 YAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
K G++ A+KL M R D+VT+N++I GFC++ + A+ FD M P
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPD 431
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+VT+N +I Y + R D + L+R++ GL + T++++I GF + A DL +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLIDMYSKC 405
+M+ GV P++IT E+ + ++MS +D D + N +I K
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEV-IQMSKIDLDTVAYNIIIHGMCKG 550
Query: 406 GDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
++ A +F + E DV ++N +I G+C A LF KM+D+ P+ T+
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDG 488
N LI G +++G D++++L + +G
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 198/442 (44%), Gaps = 34/442 (7%)
Query: 126 LVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ + C LS + F ++ + ++ T++ ++ E E + LF MV G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 182 FLPDEFLLPKILQA----------------CGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
FL L ++++ C + LE L++ + + G+ +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVTYG 265
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+I+ K G+ A L M+E D V ++AII C++G A+ F M E+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
G+ P + T+N +I + GR A L+R M + PDV T++++IS ++G+ + A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
L +ML + P+++T + + DV+T N++ID+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 402 YSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
Y + ++ ++ + R + ++NT+I G+C A +LF +M P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 458 VVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+T N L+ G+ ++ ++AL+LF+ I+ KI + ++N +I G + + D+A +F
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 518 RRMQFFQIAPNSVTVLSILPAF 539
+ + P+ T ++ F
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGF 582
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 23/318 (7%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA----R 111
A +++LC +G SDA + + E+G TY +C+ GR A R
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY-----NCMIDGFCSFGRWSDAQRLLR 355
Query: 112 IGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREK 165
+ +NP V T L+S K G L EA K+ DEM R +F T+++MI +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 166 SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN 225
+++ +F M PD I+ + ++ G + R G+ ++ N
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+++ + + + A+ LF+ M D++T N ++ GFC+N +E+A + F+ +Q
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
++ V +NI+I + + D A DL + G+ PDV T++ MISGF K A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 342 LDLLRKMLLSGVEPNSIT 359
L KM +G EP++ T
Sbjct: 592 NVLFHKMKDNGHEPDNST 609
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 24/356 (6%)
Query: 268 IEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
++ A +FD M V N +I + ++ R D+A+ L RKME + ++Y+++
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
+I F + +L K+ G +P+ +T + G V+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 388 LVDD---------------VLTGNSLIDMYSKCGD-LEAAQRIFDMM---YERDVYSWNT 428
++ V+T N+LI+ G LEAA + M+ DV ++ T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
I+ G C G A L KM+++ P+VV ++A+I + G A LF + + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
I NV ++N +I GF G+ A ++ R M +I P+ +T +++ A++ GK
Sbjct: 327 -IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS--ASVKEGKLF 383
Query: 549 KEIHCC--ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ C L R + + N +I + K ++ +FD + D++++N ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 145/312 (46%), Gaps = 7/312 (2%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+ ++ CS G SDA +L + E+ +T+ L+ + + + +L + L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-L 393
Query: 115 VGNVNPFVETKLVSMYSKCGH--LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
+ P T +Y C H +A+ +FD M ++ T++ +I R K +E +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
L ++ R G + + ++ + +L + + I HG+C N ++ +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 233 KCGEMGFAKKLFK----SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ ++ A +LF+ S + D+V +N II G C+ +++A F ++ GVEP +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+N++I+ + A L KM+ G PD T++++I G + G +++L+ +M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 349 LLSGVEPNSITV 360
+G ++ T+
Sbjct: 634 RSNGFSGDAFTI 645
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 180/382 (47%), Gaps = 10/382 (2%)
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
R ++ E + L MVR G+ PD L K+++ ++ + + + G +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVF 159
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAM 278
N+++ + K + A ++ M +D +VT+N +I C G ++ A K + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
+ +P ++T+ ILI + G D A+ LM +M S GL PD++T++++I G ++G
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
A +++R + L G EP+ I+ ++ +V+T + L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 399 IDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
I + G +E A + +M E+ D YS++ +I +C G A E M
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
P++V +N ++ ++G DQAL++F ++ + G N +S+N++ + SG K +A+
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG-CSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 515 QIFRRMQFFQIAPNSVTVLSIL 536
+ M I P+ +T S++
Sbjct: 459 HMILEMMSNGIDPDEITYNSMI 480
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 224/481 (46%), Gaps = 19/481 (3%)
Query: 53 FMDAQLNQL----CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL 108
F D Q+ ++ C +G +++ +L+++ +G I L++ I +
Sbjct: 87 FRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 109 HARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGA-CSR 163
+ G + F L++ + K + +A +V D MR ++ T++ MIG+ CSR
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
K + + + ++ P +++A G ++ + + G+ +
Sbjct: 207 GK-LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
N+I+ K G + A ++ ++++ E D +++N ++ G E+ K M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
E +P +VT++ILI + + G+ + A++L++ M+ GLTPD Y++ +I+ F ++GR
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
A++ L M+ G P+ + EI G ++ + + N++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 400 DMYSKCGD-LEAAQRIFDMM---YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
GD + A I +MM + D ++N++I C G +A+EL + M+ +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQ 515
P+VVT+N ++ G+ ++ + A+++ + + +G + N ++ LI G +G + +AM+
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG-CRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 516 I 516
+
Sbjct: 565 L 565
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/580 (21%), Positives = 246/580 (42%), Gaps = 106/580 (18%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V ++S+Y K G +S A KVFD+M ERN +++ +I S+ ++ +F +M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM-CSSIRVNNSIMAVYAKCGEMGF 239
G+LP++ + +L +C D+ G +H +++++G+ + V ++ +Y + +
Sbjct: 110 GYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM--------------------- 278
A+++F+ M + TWN +++ G +++ +F +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 279 --------------QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
++G++ + N LI++Y + G +A + + S+ D+ +
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW----DIVS 283
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+++I + AL L M G PN T +IHG+ +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH--AGFCGKA 442
K ++ GN+LID Y+KCG+LE ++ FD + ++++ WN ++ GY + C
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC--- 400
Query: 443 YELFMKMQDSDSPPNVVTWNA---------------------------LITGYMQSGAED 475
LF++M P T++ +++ M+S A++
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 476 Q-------------------ALDLFKRI-EKDGKIKRNV-----------ASWNSLIAGF 504
Q L++ I + G+ +V SWN IA
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNL-VSE 563
+S ++ +++F+ M I P+ T +SIL + L IH + + ++
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD 580
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
V N+LID Y K G++ ++F+ K++I+W ++S
Sbjct: 581 TFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/539 (21%), Positives = 224/539 (41%), Gaps = 67/539 (12%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQ--SCIDRDCIEVGRELHARIGLVG-NVNPF 121
G L + + L G+ + +++ +L+ SC+ +++ ++LH G +
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD--LDISKQLHCSATKKGLDCEIS 251
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V L+S Y KCG+ A ++F + ++ +W+A+I A ++ ++ + + LF M HG
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F P++ +L L GR IH + I++G + I + N+++ YAKCG + ++
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS----- 296
F + +++ V WNA+++G+ N D F M + G P T++ + S
Sbjct: 372 LCFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTE 430
Query: 297 -------YNQLGRCD---IAVDLMRKMESFGLTPD---VYTWSS---------MISGFTQ 334
++G D + LMR L D + W+S +++G
Sbjct: 431 LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYS 490
Query: 335 KGRTYH--------------------------------ALDLLRKMLLSGVEPNSITVXX 362
+ YH ++L + ML S + P+ T
Sbjct: 491 RRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVS 550
Query: 363 XXXXXXXXXXXXXXXEIHGIGVKMSL-VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER 421
IHG+ K D N LIDMY KCG + + ++F+ E+
Sbjct: 551 ILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK 610
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
++ +W +I G+ +A E F + P+ V++ +++T G + + LF
Sbjct: 611 NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLF 670
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
+++ KD ++ + + + ++G +A + R M F AP T L FA
Sbjct: 671 QKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 198/515 (38%), Gaps = 117/515 (22%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCS----SIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
+L C K + +H+++I +CS + V N+I+++Y K GE+ A K+F M
Sbjct: 18 LLNVCRKAPSFARTKALHALSIT--LCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA-------SYNQL 300
ER+ V++N II G+ + GD+++A F M+ G P T + L++ + QL
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQL 135
Query: 301 ----------------GRCDIA----VDLMRKMES-FGLTP--DVYTWSSMISGFTQKGR 337
G C + +DL+ E F P + TW+ M+S +G
Sbjct: 136 HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGF 195
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
+ R+++ G + ++H K L ++ NS
Sbjct: 196 LKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNS 255
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
LI Y KCG+ A+R+F D+ SWN II + KA +LF+ M + PN
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 458 -----------------------------------VVTWNALITGYMQSGAEDQALDLFK 482
+V NALI Y + G + + F
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 483 RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA--PNSVTVLSILPAFA 540
I +N+ WN+L++G+ KD + + +Q Q+ P T + L +
Sbjct: 376 YIR-----DKNIVCWNALLSGY---ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKS-- 425
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL-------------------- 580
+++++H +R V + L+ SYAK+ +
Sbjct: 426 --CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 581 ----MYSRR--------IFDGLPLKDIISWNIMLS 603
+YSRR + L D +SWNI ++
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 190/435 (43%), Gaps = 37/435 (8%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMI-GACSREKSWEEVVDLFYDMVR 179
F++ KL+ Y+K +A K+FDEM RN+ TW+ +I G R+ L + +
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 180 HGFLPDEFL----LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
D L +++ C +++ G +H + ++ G+ SS + S++ Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 236 EMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG------------- 282
+ A+++F+++ +RD V WNA+++ + NG I++A M +
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL 251
Query: 283 -----VEPGLVTWNILI------------ASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
+E G IL A N + + D ES + +V +W
Sbjct: 252 LSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-VVRNVVSW 310
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
++MI GF Q G A+ L +MLL ++P+ +T ++ + K
Sbjct: 311 NAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK 370
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYEL 445
D + NSLI YS+ G+L A F + E D+ SW ++IG GF ++ ++
Sbjct: 371 KGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQM 430
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F M P+ +T+ +++ G + L FKR+ + KI+ + LI
Sbjct: 431 FESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLG 489
Query: 506 QSGQKDKAMQIFRRM 520
++G D+A + M
Sbjct: 490 RAGFIDEASDVLNSM 504
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 44/367 (11%)
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
D++Q + M ++G+ L N L+ +Y ++ D A L +M ++ TW+
Sbjct: 54 DVKQEHGF---MVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMP----LRNIVTWN 106
Query: 327 SMISGFTQK-GRTYHALDL----LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
+I G Q+ G T H L L ++L + V + ++ ++H
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ VK L SL+ Y KCG + A+R+F+ + +RD+ WN ++ Y G +
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 442 AYELFMKMQDSDSPP---NVVTWNALITG-YMQSGAEDQALDLFK--------------- 482
A+ L +K+ SD + T+++L++ ++ G + A+ LFK
Sbjct: 227 AFGL-LKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI-LFKVSYQFDIPVATALLN 284
Query: 483 -----------RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
R + + RNV SWN++I GF Q+G+ +AM++F +M + P+ +T
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
S+L + A A ++K++ ++ +SV+N LI SY+++GNL + F +
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 592 LKDIISW 598
D++SW
Sbjct: 405 EPDLVSW 411
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 191/445 (42%), Gaps = 58/445 (13%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELH---ARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVF 143
+++M L++ C D ++ G +LH + GL + P T LV Y KCG + EAR+VF
Sbjct: 143 VSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP--STSLVHFYGKCGLIVEARRVF 200
Query: 144 DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV--RHGFLPDEFLLPKILQACGKCGD 201
+ + +R+L W+A++ + +E L M ++ F D F +L AC
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----R 256
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
+E G+ IH++ + I V +++ +YAK + A++ F+SM R+ V+WNA+I G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTW------------------------------- 290
F QNG+ +A + F M E ++P +T+
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 291 ----NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
N LI+SY++ G A+ + PD+ +W+S+I G +L +
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIRE----PDLVSWTSVIGALASHGFAEESLQMFE 432
Query: 347 KMLLSGVEPNSIT---VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
M L ++P+ IT V + K+ D+ T LID+
Sbjct: 433 SM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYT--CLIDLLG 489
Query: 404 KCGDLEAAQRIFDMM-YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
+ G ++ A + + M E ++ GG C+ ++ + K P V ++
Sbjct: 490 RAGFIDEASDVLNSMPTEPSTHALAAFTGG-CNIHEKRESMKWGAKKLLEIEPTKPVNYS 548
Query: 463 ALITGYMQSGAEDQALDLFKRIEKD 487
L Y+ G +QA L KR ++
Sbjct: 549 ILSNAYVSEGHWNQAALLRKRERRN 573
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 147/289 (50%), Gaps = 9/289 (3%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNP 120
NG + +A +L + ++ R T+ +LL +C IE G+++HA + V +
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDI 276
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V T L++MY+K HLS+AR+ F+ M RN+ +W+AMI ++ E + LF M+
Sbjct: 277 PVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PDE +L +C K + + + ++ + G + V NS+++ Y++ G + A
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
F S+ E D V+W ++I +G E++ + F++M ++ ++P +T+ ++++ +
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHG 455
Query: 301 GRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
G + ++M E + + + ++ +I + G A D+L M
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ-SGQKDKAMQI---- 516
N L+ Y + D A LF D RN+ +WN LI G +Q G + +
Sbjct: 75 NKLLQAYTKIREFDDADKLF-----DEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCY 129
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
R+ F ++ + V+ + ++ + K ++HC +++ L S S L+ Y K
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLSQEI 606
G ++ +RR+F+ + +D++ WN ++S +
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYV 219
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 217/497 (43%), Gaps = 67/497 (13%)
Query: 107 ELHARIGLVG---NVNPFVE----TKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWS 155
EL IGL G PF +KL+S +K ++M NL+T++
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
+I R + L M++ G+ PD L +L G R+ +VA+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN-----GFCHGNRISDAVALVD 172
Query: 216 GMCS------SIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQN 265
M ++ I ++ + A L M +R D VT+ A++ G C+
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLH-NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
GD + A + M+ +E +V ++ +I S + D A++L +ME+ G+ P+V T+
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
SS+IS GR A LL M+ + PN +T
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF------------------------- 326
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGK 441
++LID + K G L A+++++ M +R ++++++++I G+C G+
Sbjct: 327 ----------SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A ++ M D PNVVT+N LI G+ ++ D+ ++LF+ + + G + N ++ +LI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG-NTVTYTTLI 435
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
GF Q+ D A +F++M + PN +T +L K + R +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 562 SEISVSNILIDSYAKSG 578
+I NI+I+ K+G
Sbjct: 496 PDIYTYNIMIEGMCKAG 512
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 204/458 (44%), Gaps = 35/458 (7%)
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMCSSIRV 223
++ + LF M + P K+L A K + G + + I H + +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY--- 116
Query: 224 NNSIMAVYAKCGEMGFAK----KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
N ++ + +C + A K+ K E D VT N+++ GFC I A D M
Sbjct: 117 -NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTY 339
E G +P VT+ LI + AV L+ +M G PD+ T+ ++++G ++G T
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 340 HALDLLRKMLLSGVEPN----SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
AL+LL KM + +E N S + E+ GV+ +V+T
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR----PNVITY 291
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
+SLI G A R+ M ER ++ +++ +I + G KA +L+ +M
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 452 SDSPPNVVTWNALITGYM---QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
PN+ T+++LI G+ + G Q L+L I KD NV ++N+LI GF ++
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--IRKD--CLPNVVTYNTLINGFCKAK 407
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSN 568
+ DK M++FR M + N+VT +++ F + + + + I N
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 569 ILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
IL+D K+G L + +F+ L DI ++NIM+
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 177/398 (44%), Gaps = 50/398 (12%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+++ LN C +SDAVA++D + E G K +T+ L+ + L R+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 114 LVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G P + T +V+ K G A + ++M E N+ +S +I + + +
Sbjct: 211 QRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ ++LF +M G P+ ++ G + S I + ++ +++
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K G++ A+KL++ M +R + T++++I GFC + +A++ + M +
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + + R D ++L R+M GL + T++++I GF Q +A
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ ++M+ GV PN +LT N L+D
Sbjct: 450 VFKQMVSVGVHPN-----------------------------------ILTYNILLDGLC 474
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAG 437
K G L A +F+ + E D+Y++N +I G C AG
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 139/294 (47%), Gaps = 15/294 (5%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDR---DCIEVGRELHAR 111
A +N LC G A+ +L+ + + + Y ++ S C R D + + E+ +
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 112 IGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSW 167
G+ NV + + L+S G S+A ++ +M ER NL T+SA+I A ++
Sbjct: 283 -GVRPNVITY--SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
+ L+ +M++ P+ F ++ L + + + IR ++ N++
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + K + +LF+ M +R ++VT+ +I GF Q D + A+ F M GV
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
P ++T+NIL+ + G+ A+ + ++ + PD+YT++ MI G + G+
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
LC+ G SDA +L + E+ +T+ L+ + + + + +L+ + + +++P
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDP 356
Query: 121 --FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLF 174
F + L++ + L EA+++ + M + N+ T++ +I + K ++ ++LF
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
+M + G + + ++ + D + +++ + G+ +I N ++ K
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 235 GEMGFAKKLF----KSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
G++ A +F +S E D T+N +I G C+ G + YF A
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 9/300 (3%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPF 121
S+ P+ +++ + + +G K +T+ LL++C + GR++ + G + + +
Sbjct: 91 SDSPV-ESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVY 149
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V L+ +Y C S+ARKVFDEM ERN+ +W++++ A V + F +M+
Sbjct: 150 VGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKR 209
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F PDE + +L ACG G+L G+L+HS + + + R+ +++ +YAK G + +A+
Sbjct: 210 FCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA-MQEEGVEPGLVTWNILIASYNQL 300
+F+ M +++ TW+A+I G Q G E+A + F M+E V P VT+ ++ + +
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 301 GRCDIAVDLMRKMESF-GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G D +ME + P + + +M+ + GR A D ++KM EP+++
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM---PFEPDAVV 384
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 187/439 (42%), Gaps = 85/439 (19%)
Query: 107 ELHARIGLVGNVN-PFVETKLV--SMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR 163
++H +I L N F+ ++LV S S L+ AR + + TW+ + S
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
S E + ++ +M R G P++ P +L+AC L GR I ++HG + V
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N+++ +Y C K+ D ARK FD M E V
Sbjct: 151 GNNLIHLYGTCK---------KTSD----------------------ARKVFDEMTERNV 179
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMIS---GFTQKGRTYH 340
V+WN ++ + + G+ ++ + +M PD T ++S G G+ H
Sbjct: 180 ----VSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVH 235
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
+ ++R++ L + G +L+D
Sbjct: 236 SQVMVRELEL----------------------------------------NCRLGTALVD 255
Query: 401 MYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVV 459
MY+K G LE A+ +F+ M +++V++W+ +I G GF +A +LF KM ++S PN V
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
T+ ++ +G D F +EK KIK + + +++ ++G+ ++A ++
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 520 MQFFQIAPNSVTVLSILPA 538
M F P++V ++L A
Sbjct: 376 MPF---EPDAVVWRTLLSA 391
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+V N LI Y A +F D +RNV SWNS++ +++G+ + +
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVF-----DEMTERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 517 FRRMQFFQIAPNSVTVLSILPAFA-NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYA 575
F M + P+ T++ +L A NL GK V H + R L + L+D YA
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACGGNLSLGKLV---HSQVMVRELELNCRLGTALVDMYA 258
Query: 576 KSGNLMYSRRIFDGLPLKDIISWNIML 602
KSG L Y+R +F+ + K++ +W+ M+
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMI 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%)
Query: 495 ASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCC 554
++WN L G+ S +++ ++ M+ I PN +T +L A A+ + ++I
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 555 ALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L+ ++ V N LI Y +R++FD + ++++SWN +++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 220/502 (43%), Gaps = 61/502 (12%)
Query: 39 NYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCID 98
N ++ S P+ + +L +L S+++++ S+ GS ++ +L+SC
Sbjct: 10 NSAVAAVASTPW----NVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCAS 65
Query: 99 RDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFT--WS 155
G++LH + G PFV T L+SMY KCG +++ARKVF+E + + + ++
Sbjct: 66 LSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYN 125
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
A+I + + +F M G D + ++ C L GR +H ++
Sbjct: 126 ALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG 185
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYF 275
G+ S + V NS + +Y KCG + ++LF M + +TWNA+I+G+ QNG + +
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
+ M+ GV P T +++S LG I ++ + +ES G P+V+ ++ IS + +
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 336 GRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
G +L + + + P V +++
Sbjct: 306 G------NLAKARAVFDIMP---------------------------------VKSLVSW 326
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQ- 450
++I Y G E +FD M +R D + ++ H+G K ELF M+
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKR--IEKDGKIKRNVASWNSLIAGFLQSG 508
+ P ++ L+ ++G D+A++ + +E DG A W +L+
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG------AVWGALLGACKIHK 440
Query: 509 QKDKAMQIFRRMQFFQIAPNSV 530
D A F ++ F+ PN++
Sbjct: 441 NVDMAELAFAKVIEFE--PNNI 460
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 42/315 (13%)
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
W+ + + ++ L R ML SG P++ + ++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS--WNTIIGGYCHAGFCGKA 442
K + +LI MY KCG + A+++F+ + S +N +I GY A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 443 YELFMKMQDSDSPPNVVT--------------W---------------------NALITG 467
+F +M+++ + VT W N+ IT
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
YM+ G+ + LF + G I +WN++I+G+ Q+G ++++ +M+ + P
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLI-----TWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
+ T++S+L + A+L A K E+ V + VSN I YA+ GNL +R +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 588 DGLPLKDIISWNIML 602
D +P+K ++SW M+
Sbjct: 316 DIMPVKSLVSWTAMI 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
++ P V+T ALI+ Y + G A +F+ + ++ +N+LI+G+ + +
Sbjct: 85 ETEPFVLT--ALISMYCKCGLVADARKVFEENPQSSQLS---VCYNALISGYTANSKVTD 139
Query: 513 AMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
A +FRRM+ ++ +SVT+L ++P + +H ++ L SE++V N I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 573 SYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
Y K G++ RR+FD +P+K +I+WN ++S
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 197/455 (43%), Gaps = 64/455 (14%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGR---ELHARIGLVGN 117
LCS G A +++ + QG TY +L + +E+ E R GLV +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDL 173
V + T +V + K G + +ARK F+EMRE N+ T++A+I A + K +L
Sbjct: 518 V--YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F M+ G LP+ ++ K G +E + I MC S V + M
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVE-----KACQIFERMCGSKDVPDVDM----- 625
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
+ K+ + + + VT+ A++ GFC++ +E+ARK DAM EG EP + ++ L
Sbjct: 626 -----YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
I ++G+ D A ++ +M G +YT+SS+I + + R A +L KML +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
PN V+ +ID K G + A +
Sbjct: 741 APN-----------------------------------VVIYTEMIDGLCKVGKTDEAYK 765
Query: 414 IFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
+ MM E+ +V ++ +I G+ G EL +M PN VT+ LI
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
++GA D A +L + + K + A + +I GF
Sbjct: 826 KNGALDVAHNLLEEM-KQTHWPTHTAGYRKVIEGF 859
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 201/502 (40%), Gaps = 59/502 (11%)
Query: 49 PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRE 107
P PK ++ ++ C++G S A +L + + G + Y L+ S C D+D +
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL----- 424
Query: 108 LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR---- 163
C L A K + EM + + + +R
Sbjct: 425 ------------------------NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
+E+ + +M+ GF+PD K+L +E L+ R G+ + +
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQ 279
++ + K G + A+K F M E + VT+ A+I + + + A + F+ M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 280 EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM----------------ESFGLTPDVY 323
EG P +VT++ LI + + G+ + A + +M + P+V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
T+ +++ GF + R A LL M + G EPN I E+
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFC 439
+ + T +SLID Y K + A ++ M E +V + +I G C G
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
+AY+L M++ PNVVT+ A+I G+ G + L+L +R+ G + N ++
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG-VAPNYVTYRV 819
Query: 500 LIAGFLQSGQKDKAMQIFRRMQ 521
LI ++G D A + M+
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMK 841
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 219/519 (42%), Gaps = 36/519 (6%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+P F ++ LC +A+ L+ + +TY LL C+++ + +
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 108 LHARIGLVGNV-NPFVETKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGA-C 161
+ + + G +P + LV Y G S A K+ +M + ++ +IG+ C
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 162 SREKSWE-EVVDL----FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG 216
+ S +++DL + +M+ G + ++ + + G E + I G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 217 MCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQAR 272
+ ++ +M A LF+ M D T+ ++ FC+ G IEQAR
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 273 KYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGF 332
K+F+ M+E G P +VT+ LI +Y + + A +L M S G P++ T+S++I G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 333 TQKGRTYHALDLLRKMLLS----------------GVEPNSITVXXXXXXXXXXXXXXXX 376
+ G+ A + +M S PN +T
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGG 432
++ + + ++LID K G L+ AQ + M E +Y+++++I
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
Y A ++ KM ++ PNVV + +I G + G D+A L + +E+ G +
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG-CQP 777
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
NV ++ ++I GF G+ + +++ RM +APN VT
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/558 (20%), Positives = 219/558 (39%), Gaps = 66/558 (11%)
Query: 50 YPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH 109
+ +F++ + + C NG S A+ L L + + TY L+Q+ + D ++ +H
Sbjct: 199 FGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIH 258
Query: 110 ARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFD-EMRERNLFTWSAMIGACSREKSW 167
+ L ++ F K G EA + + E + ++ +I +
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
EE +D M LP+ +L C L + + ++ + G S ++ NS+
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 228 MAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGD------IEQARKYFDA 277
+ Y G+ +A KL K M + V +N +I C + D ++ A K +
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
M GV + + G+ + A ++R+M G PD T+S +++ +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
A L +M G LV DV T
Sbjct: 499 MELAFLLFEEMKRGG-----------------------------------LVADVYTYTI 523
Query: 398 LIDMYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
++D + K G +E A++ F+ M E +V ++ +I Y A A ELF M
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRI---------------EKDGKIKRNVASWN 498
PN+VT++ALI G+ ++G ++A +F+R+ D + NV ++
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
+L+ GF +S + ++A ++ M PN + +++ + + +E+
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 559 NLVSEISVSNILIDSYAK 576
+ + + LID Y K
Sbjct: 704 GFPATLYTYSSLIDRYFK 721
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 179/420 (42%), Gaps = 51/420 (12%)
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA----KCGEM 237
F P ++QA K L++ LIH R +++R++ + +A K G+
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIH----REMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 238 GFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA- 295
A L ++ + D+V + +I+G C+ E+A + + M+ P +VT++ L+
Sbjct: 287 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Query: 296 --SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
+ QLGRC +++M ME G P ++S++ + G +A LL+KM+ G
Sbjct: 347 CLNKKQLGRCKRVLNMMM-ME--GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS-KCGDLEAAQ 412
P + V ++L G+ D S C L+ A+
Sbjct: 404 MPGYV------------------------------VYNILIGSICGDKDSLNCDLLDLAE 433
Query: 413 RIFDMMYERDVYSWNTIIGGY----CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
+ + M V + + C AG KA+ + +M P+ T++ ++
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ + A LF+ +++ G + +V ++ ++ F ++G ++A + F M+ PN
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
VT +++ A+ E+ L + I + LID + K+G + + +IF+
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 137/350 (39%), Gaps = 24/350 (6%)
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
N ++ C+NG A + +++ P T+N LI ++ + R D A + R+M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
L D +T + G+ AL L+ P+++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ-----RIFDMMYERDVYS----W 426
+ S + +V+T ++L+ CG L Q R+ +MM Y +
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLL-----CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
N+++ YC +G AY+L KM P V +N LI G + + DL EK
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLLDLAEK 434
Query: 487 ------DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
+ N + +S +G+ +KA + R M P++ T +L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
N + + R LV+++ I++DS+ K+G + +R+ F+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 148/276 (53%), Gaps = 5/276 (1%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSE 138
S V P T+ ++++SC D + +G+ +H + G ++ +V+ LV+ YSKCG +
Sbjct: 101 SNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEG 160
Query: 139 ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK 198
AR+VFD M E+++ W++++ + +E + +FY M GF PD +L AC +
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 199 CGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAI 258
G + G +H I G+ ++++ +++ +Y++CG++G A+++F M E + W A+
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAM 280
Query: 259 ITGFCQNGDIEQARKYFDAMQEE-GVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESF 316
I+ + +G +QA + F+ M+++ G P VT+ ++++ G + + ++M +S+
Sbjct: 281 ISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSY 340
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
L P V M+ + G A + ++ +G
Sbjct: 341 RLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATG 376
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 173/417 (41%), Gaps = 72/417 (17%)
Query: 106 RELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
+++HA + + G + + TKL+++ ++ +F + + F ++++I + S+
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
+ V + M+ P + ++++C L G+ +H A+ G V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
+++ Y+KCG D+E AR+ FD M E+ +
Sbjct: 146 AALVTFYSKCG-------------------------------DMEGARQVFDRMPEKSI- 173
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
V WN S++SGF Q G A+ +
Sbjct: 174 ---VAWN-----------------------------------SLVSGFEQNGLADEAIQV 195
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+M SG EP+S T +H + L +V G +LI++YS+
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP-PNVVTWNA 463
CGD+ A+ +FD M E +V +W +I Y G+ +A ELF KM+D P PN VT+ A
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+++ +G ++ ++KR+ K ++ V ++ ++G D+A + ++
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PD + ++S+I ++ H + R+ML S V P++ T +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H V D +L+ YSKCGD+E A+++FD M E+ + +WN+++ G+ G
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAE-----------DQALD--------- 479
+A ++F +M++S P+ T+ +L++ Q+GA + LD
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 480 --LFKRIEKDGKIKR--------NVASWNSLIAGFLQSGQKDKAMQIFRRMQ-FFQIAPN 528
L+ R GK + NVA+W ++I+ + G +A+++F +M+ PN
Sbjct: 250 INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 529 SVTVLSILPAFAN 541
+VT +++L A A+
Sbjct: 310 NVTFVAVLSACAH 322
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
NG +A+ + + E G + T+++LL +C + +G +H I G ++N +
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH-G 181
T L+++YS+CG + +AR+VFD+M+E N+ W+AMI A ++ V+LF M G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIR-HGMCSSIRVNNSIMAVYAKCGEMGFA 240
+P+ +L AC G +E GR ++ + + + + + ++ + + G + A
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 241 KKLFKSMDERDSVT----WNAIITGFCQ 264
K +D T W A++ G C+
Sbjct: 366 YKFIHQLDATGKATAPALWTAML-GACK 392
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
G +CHA G + +++ AL+T Y + G + A +F R+ +
Sbjct: 128 GVHCHAVVSGFGLDTYVQA-------------ALVTFYSKCGDMEGARQVFDRMPE---- 170
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+++ +WNSL++GF Q+G D+A+Q+F +M+ P+S T +S+L A A A
Sbjct: 171 -KSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
+H + L + + LI+ Y++ G++ +R +FD + ++ +W M+S
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
+RRM ++P++ T S++ + A+L A + K +HC A+ + V L+ Y+K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
G++ +R++FD +P K I++WN ++S
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVS 181
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 169/400 (42%), Gaps = 44/400 (11%)
Query: 126 LVSMYSKCGHLSE---ARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
L S CG LS A +VF ++ N+ ++AMI S E + F M G
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
DE+ +L++C DL G+ +H IR G ++ ++ +Y G MG
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG---- 154
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
A+K FD M E V V WN++I + G
Sbjct: 155 ---------------------------DAQKVFDEMSERNV----VVWNLMIRGFCDSGD 183
Query: 303 CDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXX 362
+ + L ++M + +W+SMIS ++ GR AL+L +M+ G +P+ TV
Sbjct: 184 VERGLHLFKQMSE----RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 239
Query: 363 XXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT-GNSLIDMYSKCGDLEAAQRIFDMMYER 421
IH L D +T GN+L+D Y K GDLEAA IF M R
Sbjct: 240 VLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 299
Query: 422 DVYSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
+V SWNT+I G G +LF M ++ PN T+ ++ +G ++ +L
Sbjct: 300 NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 359
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
F + + K++ + +++ +SG+ +A + + M
Sbjct: 360 FGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 27 EFIASTRVHANSNYVSMSIRSLPYPKFM--DAQLNQLCSNGPLSDAVAILDSLAEQGSKV 84
FI+ +NS+Y + + P + +A + GP ++++ S+ +G
Sbjct: 41 HFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWA 100
Query: 85 RPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVF 143
TY LL+SC + G+ +H + G + + +V +Y+ G + +A+KVF
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 144 DEMRERNLFTWSAMI-GACSREK-----------------SW-------------EEVVD 172
DEM ERN+ W+ MI G C SW E ++
Sbjct: 161 DEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE 220
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS-IRVNNSIMAVY 231
LF +M+ GF PDE + +L G L+TG+ IHS A G+ I V N+++ Y
Sbjct: 221 LFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFY 280
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-VEPGLVTW 290
K G++ A +F+ M R+ V+WN +I+G NG E FDAM EEG V P T+
Sbjct: 281 CKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
Query: 291 NILIASYNQLGRCDIAVDLMR-KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
++A + G+ + +L ME F L + +M+ ++ GR A L+ M
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 138/316 (43%), Gaps = 45/316 (14%)
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N+L+A + + D ++ S P+V +++MI ++ G +L M
Sbjct: 36 NLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKS 95
Query: 351 SGVEPNSITVXXXXXXXXXXXXXXXXXEIHG--IGVKMSLVDDVLTGNSLIDMYSKCGDL 408
G+ + T +HG I + + G ++++Y+ G +
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRM 153
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
AQ++FD M ER NVV WN +I G+
Sbjct: 154 GDAQKVFDEMSER-----------------------------------NVVVWNLMIRGF 178
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
SG ++ L LFK++ + R++ SWNS+I+ + G+ +A+++F M P+
Sbjct: 179 CDSGDVERGLHLFKQMSE-----RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 529 SVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE-ISVSNILIDSYAKSGNLMYSRRIF 587
TV+++LP A+L K IH A L + I+V N L+D Y KSG+L + IF
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 588 DGLPLKDIISWNIMLS 603
+ ++++SWN ++S
Sbjct: 294 RKMQRRNVVSWNTLIS 309
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 221/530 (41%), Gaps = 76/530 (14%)
Query: 12 SRPPLSI-PSYSASQFEFIASTRVHANSNYVSM---SIRSLPYPKFMDAQLNQ-LCSNGP 66
S PP I P+Y F+ + + S V++ SI S K + QL Q LC G
Sbjct: 4 SHPPQVIQPTYHT--VNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGK 61
Query: 67 LSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETK 125
L A+ +L Q S TY L+ C R + +H I G + +PF+ TK
Sbjct: 62 LKQAIRVLS----QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATK 117
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ MYS G + ARKVFD+ R+R ++ W+A+ A + EEV+ L++ M R G D
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESD 177
Query: 186 EFLLPKILQAC--GKC--GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F +L+AC +C L G+ IH+ R G S + + +++ +YA+ G + +A
Sbjct: 178 RFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYAS 237
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE-------------------- 281
+F M R+ V+W+A+I + +NG +A + F M E
Sbjct: 238 YVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297
Query: 282 -----------------GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
G++ L + L+ Y + G+ ++ + +M DV +
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD----RDVVS 353
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI----- 379
W+S+IS + G A+ + +ML +G P +T +
Sbjct: 354 WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 380 --HGIGVKMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTIIGGYCHA 436
HGI ++ ++D+ + L EAA+ + DM E W +++G C
Sbjct: 414 RDHGIKPQIEHY------ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS-CRI 466
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
+ E + + P N + L Y AE Q D KR++K
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIY----AEAQMWDEVKRVKK 512
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 37/375 (9%)
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P + ++ CG L +H + +G + ++ +Y+ G + +A+K+
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 244 FKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI-------AS 296
F +R WNA+ G E+ + M GVE T+ ++ +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 297 YNQLGRC-DIAVDLMRKMES-------------------------FGLTP--DVYTWSSM 328
N L + +I L R+ S FG P +V +WS+M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVE--PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
I+ + + G+ + AL R+M+ + PNS+T+ IHG ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
L + ++L+ MY +CG LE QR+FD M++RDV SWN++I Y G+ KA ++F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQ 506
+M + + P VT+ +++ G ++ LF+ + +D IK + + ++ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 507 SGQKDKAMQIFRRMQ 521
+ + D+A ++ + M+
Sbjct: 435 ANRLDEAAKMVQDMR 449
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 36/250 (14%)
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKM 449
D LI MYS G ++ A+++FD +R +Y WN + AG + L+ KM
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 450 QDSDSPPNVVTWNALITG---------YMQSGAEDQA-----------------LDLFKR 483
+ T+ ++ ++ G E A +D++ R
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 484 IE--------KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM--QFFQIAPNSVTVL 533
G RNV SW+++IA + ++G+ +A++ FR M + +PNSVT++
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 534 SILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK 593
S+L A A+L A ++ K IH LRR L S + V + L+ Y + G L +R+FD + +
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 594 DIISWNIMLS 603
D++SWN ++S
Sbjct: 350 DVVSWNSLIS 359
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 198/454 (43%), Gaps = 93/454 (20%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMN----------LLQSCIDRDCIEVGRELHA-- 110
+ LS +++L S ++ +V P Y N +LQ C + + H
Sbjct: 30 NTSSLSRNISVLASYDQE--EVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKI 87
Query: 111 -RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
RI L G+V L++ YSKCG + AR+VFD M ER+L +W+ MIG +R + E
Sbjct: 88 IRIDLEGDVTLL--NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESE 145
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACG-KCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
+D+F +M GF EF + +L ACG C LE +L H ++++ + ++ V +++
Sbjct: 146 ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALL 204
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+YAKCG + A ++F+SM ++ SVTW++++ G+ QN + E+A + Q +E
Sbjct: 205 DLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQF 264
Query: 289 TWNILIASYNQLGR----------------------CDIAVDLMRKM----ESFGLTPDV 322
T + +I + + L AVD+ K ES+ + +V
Sbjct: 265 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 324
Query: 323 YT-----WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXX 377
W+++ISGF + R + L KM G+ PN +T
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF----------------- 367
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-----DVYSWNTIIGG 432
+SL+ + G +E +R F +M +V ++ ++
Sbjct: 368 ------------------SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 409
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
AG +AYEL ++ P W +L+
Sbjct: 410 LGRAGLLSEAYEL---IKSIPFDPTASIWGSLLA 440
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 193/445 (43%), Gaps = 42/445 (9%)
Query: 178 VRHGFLPDEF----LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
V G +EF L+ +ILQ C + G + + H IR + + + N ++ Y+K
Sbjct: 49 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 108
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
CG + A+++F M ER V+WN +I + +N +A F M+ EG + T + +
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 294 IAS--------------------------------YNQLGRCDIAVDLMRKMESFGLTPD 321
+++ + +C + D ++ ES
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V TWSSM++G+ Q AL L R+ +E N T+ ++H
Sbjct: 229 V-TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ K +V +S +DMY+KCG L + IF + E+++ WNTII G+ +
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE 347
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
LF KMQ PN VT+++L++ +G ++ FK + + NV ++ ++
Sbjct: 348 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 407
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL----VAGKKVKEIHC-CAL 556
++G +A ++ + + F A ++L+ + NL VA +K+ E+ A
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467
Query: 557 RRNLVSEISVSNILIDSYAKSGNLM 581
L+S I +N + AKS L+
Sbjct: 468 NHVLLSNIYAANKQWEEIAKSRKLL 492
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 40/259 (15%)
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
HG +++ L DV N LI+ YSKCG +E A+++FD M ER + SWNT+IG Y
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 440 GKAYELFMKMQDSDSP-----------------------------------PNVVTWNAL 464
+A ++F++M++ N+ AL
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ Y + G A+ +F+ ++ + +W+S++AG++Q+ ++A+ ++RR Q
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSV-----TWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
+ N T+ S++ A +NL A + K++H + S + V++ +D YAK G+L S
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 585 RIFDGLPLKDIISWNIMLS 603
IF + K++ WN ++S
Sbjct: 319 IIFSEVQEKNLELWNTIIS 337
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/536 (23%), Positives = 228/536 (42%), Gaps = 69/536 (12%)
Query: 29 IASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPIT 88
+ S V N VS SI ++ LC G L +A + D + E+G + T
Sbjct: 255 VMSKEVTCAPNSVSYSI-----------LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 89 YMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
Y L+++ DR G + +A +FDEM
Sbjct: 304 YTVLIKALCDR----------------------------------GLIDKAFNLFDEMIP 329
Query: 149 R----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
R N+ T++ +I R+ EE + MV+ P ++ K G +
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIIT 260
+ +V + ++R N +M + G+ A L K M + D V++N +I
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
G C+ G + A K +M +EP +T+ +I ++ + G+ D+A + M G++
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV--EPNSITVXXXXXXXXXXXXXXXXXE 378
D T +++I G + G+T AL +L ++ + P+S+ V E
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE----E 565
Query: 379 IHGIGV--KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGG 432
+ +G K+ LV V+T +L+D + GD+ + RI ++M +VY + II G
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 433 YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
C G +A +L MQDS PN VT+ ++ GY+ +G D+AL+ + + + G +
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG-YEL 684
Query: 493 NVASWNSLIAGFL--QSGQKDKAMQIFRRMQFFQIAPNSVT-VLSILPAFANLVAG 545
N ++SL+ GF+ Q G + + + P + ++S++ ++G
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG 740
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 203/469 (43%), Gaps = 25/469 (5%)
Query: 143 FDEMRE-----RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACG 197
FDE+RE N +S+++ + ++ + M GF+ I+ A
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER-----DS 252
K G E + S ++ G + S++ + + + A K+F M + +S
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
V+++ +I G C+ G +E+A D M E+G +P T+ +LI + G D A +L +
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M G P+V+T++ +I G + G+ A + RKM+ + P+ IT
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD----LEAAQRIFDMMYERDVYSWNT 428
E+ + K + +V T N L++ + G + +R+ D D+ S+N
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I G C G AY+L M D P+ +T+ A+I + + G D A + + G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI--APNSVTVLSILPAFANLVAGK 546
I + + +LI G + G+ A+ I + +I P+S+ V+ L G
Sbjct: 507 -ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI-----LDMLSKGC 560
Query: 547 KVKEIHCCALRRN---LVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
KVKE + N LV + L+D +SG++ S RI + + L
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 49/330 (14%)
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
+ M+ +G G++ + ++ + + G + A M K+ G D + +S++ GF +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 335 KGRTYHAL---DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
AL D++ K + PNS++ IHG+
Sbjct: 243 GLNLRDALKVFDVMSKEVTCA--PNSVSYSIL---------------IHGL--------- 276
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFM 447
+ G LE A + D M E+ ++ +I C G KA+ LF
Sbjct: 277 -----------CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
+M PNV T+ LI G + G ++A + +++ KD +I +V ++N+LI G+ +
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-RIFPSVITYNALINGYCKD 384
Query: 508 GQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA--LRRNLVSEIS 565
G+ A ++ M+ PN T ++ + GK K +H L L +I
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV--GKPYKAVHLLKRMLDNGLSPDIV 442
Query: 566 VSNILIDSYAKSGNLMYSRRIFDGLPLKDI 595
N+LID + G++ + ++ + DI
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 187/408 (45%), Gaps = 18/408 (4%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
N++T++ MI +E ++ M G P ++Q G +E RLI
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQN 265
S G ++ N I++ C E G A ++ + M E DSV++N +I G N
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWM--CNE-GRASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
GD+E A Y D M ++G+ P T+N LI + + A L+R++ G+ D T+
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
+ +I+G+ Q G A L +M+ G++P T E+ V
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS-------WNTIIGGYCHAGF 438
+ D++ N+L+D + G+++ R F ++ E D+ S +N ++ G C G
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMD---RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+A EL +M+ P+ +++N LI+GY + G A + + G + ++N
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG-FNPTLLTYN 576
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
+L+ G ++ + + A ++ R M+ I PN + S++ A +NL A K
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKK 624
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 197/460 (42%), Gaps = 46/460 (10%)
Query: 140 RKVFDEM-------RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKI 192
R +FDE+ ++ + ++ C + + +E ++ FY M GF P I
Sbjct: 137 RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHI 196
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
L + +E + ++ R + S++
Sbjct: 197 LTLLSRLNRIENAWVFYADMYRMEIKSNV------------------------------- 225
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
T+N +I C+ G +++A+ + M+ G++P +VT+N L+ ++ GR + A ++ +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M+S G PD+ T++ ++S +GR A ++LR+M G+ P+S++
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNT 428
VK +V T N+LI +EAA+ + + E+ D ++N
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I GYC G KA+ L +M P T+ +LI + +A +LF+++ G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+K ++ N+L+ G G D+A + + M I P+ VT ++ ++
Sbjct: 463 -MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
+E+ RR + + N LI Y+K G+ ++ + D
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 179/435 (41%), Gaps = 51/435 (11%)
Query: 43 MSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI 102
M I+S Y + +N LC G L A L + G K +TY L+Q
Sbjct: 219 MEIKSNVYT--FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG------- 269
Query: 103 EVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMI 158
+S G + AR + EM+ + ++ T++ ++
Sbjct: 270 ---------------------------FSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 159 GACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC 218
E EV+ +M G +PD +++ C GDLE ++ GM
Sbjct: 303 SWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKY 274
+ N+++ ++ A+ L + + E+ DSVT+N +I G+CQ+GD ++A
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
D M +G++P T+ LI + + A +L K+ G+ PD+ ++++ G
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
G A LL++M + + P+ +T E+ G + + D ++
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N+LI YSK GD + A + D M + + ++N ++ G A EL +M+
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 451 DSDSPPNVVTWNALI 465
PN ++ ++I
Sbjct: 600 SEGIVPNDSSFCSVI 614
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 230/522 (44%), Gaps = 61/522 (11%)
Query: 38 SNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPI--TYMNLLQS 95
+ YVS+S P + + L +S A+++ +G K +P TY +++
Sbjct: 155 NTYVSVS------PAVLSELVKALGRAKMVSKALSVF--YQAKGRKCKPTSSTYNSVILM 206
Query: 96 CIDRDCIEVGRELHARIGLVGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMRERNL-- 151
+ E E++ + G+ P + L+S Y K G A ++FDEM++ +
Sbjct: 207 LMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQP 266
Query: 152 --FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
++ ++G + E+ +DLF +M R G P + ++++ GK G ++ +
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITG-FCQ 264
+R G+ + N++M + K G + +F M V++N +I F
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
+ + +FD M+ + V P T++ILI Y + R + A+ L+ +M+ G P
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+ S+I+ K + Y A + L K L S V
Sbjct: 447 YCSLINALG-KAKRYEAANELFKELKENFGNVSSRVYAV--------------------- 484
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCG 440
+I + KCG L A +F+ M + DVY++N ++ G AG
Sbjct: 485 -------------MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSL 500
+A L KM+++ ++ + N ++ G+ ++G +A+++F+ I+ G IK + ++N+L
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG-IKPDGVTYNTL 590
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL 542
+ F +G ++A ++ R M+ +++T SIL A N+
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 172/374 (45%), Gaps = 36/374 (9%)
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLM 310
D++T++A+I+ + + G + A + FD M++ ++P + L+ Y ++G+ + A+DL
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 311 RKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
+M+ G +P VYT++ +I G + GR A + ML G+ P+ V
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD---VVFLNNLMNIL 348
Query: 371 XXXXXXXEIHGIGVKMSL---VDDVLTGNSLID-MYSKCGDLEAAQRIFDMMYERDV--- 423
E+ + +M + V++ N++I ++ + FD M V
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 424 -YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK 482
++++ +I GYC KA L +M + PP + +LI ++ + A +LFK
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 483 RIEKD-GKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
++++ G + V + +I F + G+ +A+ +F M+ P+ +++
Sbjct: 469 ELKENFGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 542 LVAG---------KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPL 592
AG +K++E C A +I+ NI+++ +A++G + +F+ +
Sbjct: 527 --AGMINEANSLLRKMEENGCRA-------DINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 593 KDI----ISWNIML 602
I +++N +L
Sbjct: 578 SGIKPDGVTYNTLL 591
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 196/423 (46%), Gaps = 31/423 (7%)
Query: 205 GRLIHSVAIRHGMCSSIRVN------NSIMAVYAKCGEMGFAKKLFKSMDER----DSVT 254
G+L ++ + M S +VN N+I+ +K G + K+L M + + VT
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 255 WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKME 314
+N ++ G+C+ G +++A + + M++ V P L T+NILI G ++LM M+
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 315 SFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT-------VXXXXXXX 367
S L PDV T++++I G + G + A L+ +M GV+ N +T +
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DV 423
++HG D++T ++LI Y K GDL A + M ++ +
Sbjct: 398 AVTRKVKELVDMHGFS------PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
+ NTI+ C +A+ L + VT+ LI G+ + ++AL+++
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV 543
++K KI V+++NSLI G G+ + AM+ F + + P+ T SI+ +
Sbjct: 512 MKK-VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 544 AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK---DIISWNI 600
+K E + +++ + + NIL++ K G + F+ L + D +++N
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630
Query: 601 MLS 603
M+S
Sbjct: 631 MIS 633
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 216/490 (44%), Gaps = 56/490 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGREL---HARI 112
+N C G L DA+ +L+ + + KV P +TY +L++ + + +EL +
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSE-FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWE 168
GLV N + LV Y K G L EA ++ + M++ N+ T++ +I S
Sbjct: 270 GLVPNRVTY--NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMR 327
Query: 169 EVVDLFYDMVRHGFLPDEFLLPKILQACGKCG-DLETGRLI--------------HSVAI 213
E ++L M PD ++ C + G LE +L+ H++++
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 214 R---------------------HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER-- 250
+ HG I ++++ Y K G++ A ++ + M ++
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 251 --DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
+++T N I+ C+ +++A ++ + G VT+ LI + + + + A++
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
+ +M+ +TP V T++S+I G G+T A++ ++ SG+ P+ T
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER---DVYS 425
E + +K S D T N L++ K G E A F+ + E D +
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT 627
Query: 426 WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIE 485
+NT+I +C +AY+L +M++ P+ T+N+ I+ M+ G + +L K+
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687
Query: 486 -KDGKIKRNV 494
K G +KR++
Sbjct: 688 GKFGSMKRDL 697
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 85/372 (22%)
Query: 228 MAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQ---NGDIEQARKYFDAMQE 280
++ Y G+ A ++F+ M + + +T N ++ G + + I AR+ FD M +
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTY 339
GV + T+N+L+ Y G+ + A+ ++ +M S F + PD T+++++ ++KGR
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 340 HALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLI 399
+LL M +G+ PN +T N+L+
Sbjct: 258 DLKELLLDMKKNGLVPNRVTY-----------------------------------NNLV 282
Query: 400 DMYSKCGDLEAAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
Y K G L+ A +I ++M + +V ++N +I G C+AG + EL M+
Sbjct: 283 YGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 456 PNVVTWNALITGYMQSGAEDQALDLFKRIEKDG--------------------------K 489
P+VVT+N LI G + G +A L +++E DG K
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 490 IKR---------NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
+K ++ ++++LI +L+ G A+++ R M I N++T+ +IL A
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA-- 460
Query: 541 NLVAGKKVKEIH 552
L +K+ E H
Sbjct: 461 -LCKERKLDEAH 471
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 408 LEAAQRIFDMMYERDVYSWNTIIGG---YCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
L+ Q++ + + ++ + NT++ G Y + A E+F M NV T+N L
Sbjct: 151 LQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVL 210
Query: 465 ITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+ GY G + AL + +R+ + K+ + ++N+++ + G+ ++ M+
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG 270
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
+ PN VT +++ + L + K+ +I + N++ ++ NILI+ +G++
Sbjct: 271 LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGL 330
Query: 585 RIFDGLP-LK---DIISWNIML 602
+ D + LK D++++N ++
Sbjct: 331 ELMDAMKSLKLQPDVVTYNTLI 352
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/603 (21%), Positives = 269/603 (44%), Gaps = 78/603 (12%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCI---EVGRELHARIGLVGNVNPFVET 124
+AV I + +G++ + + +Q+ C D + ++ RE+ ++G+ + + T
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY--T 314
Query: 125 KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
++ + K G++ EA +V DEM ++ ++++ + + +DLF M
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA------KC 234
G PD+ + +++ C ++E + I + S+R+ S + V+ K
Sbjct: 375 GLAPDKVMFSVMVEWF--CKNMEMEKAIEF----YMRMKSVRIAPSSVLVHTMIQGCLKA 428
Query: 235 GEMGFAKKLFKSMDER---DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
A ++F E N I FC+ G ++ A + M+++G+EP +V +N
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
++ ++ ++ D+A + +M GL P+ +T+S +I GF + +A D++ +M S
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG-NSLIDMYSKCGDLEA 410
E N + E+ +K T NS+ID + K GD ++
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 411 AQRIFDMMYER----DVYSWNTIIGGYCHA------------------------------ 436
A + M E +V ++ ++I G+C +
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 437 GFCGK-----AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIK 491
GFC K AY LF ++ + PNV +N+LI+G+ G D A+DL+K++ DG I
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG-IS 727
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN----LVAGKK 547
++ ++ ++I G L+ G + A ++ + I P+ + + ++ + L A K
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787
Query: 548 VKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS----WNIMLS 603
++E+ ++++ + + + +I + + GNL + R+ D + K I+ +N+++S
Sbjct: 788 LEEMK----KKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Query: 604 QEI 606
+
Sbjct: 844 GRV 846
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 235/546 (43%), Gaps = 76/546 (13%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFY 175
P+V L S+ + + EA++++++M + T ++ A RE+ EE V +F
Sbjct: 205 PYVNNVLSSLV-RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFR 263
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
++ G PD L +QA K DL L+ + + G+ +S S++ + K
Sbjct: 264 RVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKE 323
Query: 235 GEMGFAKKLFKSMDE-------RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
G M A ++ MDE + +++ G+C+ ++ +A F+ M+EEG+ P
Sbjct: 324 GNMEEAVRV---MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG---------------- 331
V +++++ + + + A++ +M+S + P +MI G
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Query: 332 ------------------FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
F ++G+ A L+ M G+EPN +
Sbjct: 441 SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTI 429
I ++ L + T + LID + K D + A + + M +E + +NTI
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 430 IGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
I G C G KA E+ + ++ + ++N++I G+++ G D A++ ++ + ++G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG--- 545
K NV ++ SLI GF +S + D A+++ M+ ++ + LPA+ L+ G
Sbjct: 621 K-SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD-------LPAYGALIDGFCK 672
Query: 546 ----KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL-----MYSRRIFDGLPLKDII 596
K + L+ +SV N LI + G + +Y + + DG+ D+
Sbjct: 673 KNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC-DLF 731
Query: 597 SWNIML 602
++ M+
Sbjct: 732 TYTTMI 737
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 158/383 (41%), Gaps = 89/383 (23%)
Query: 139 ARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ 194
AR +F EM E+ L FT+S +I + K + D+ M F +E + I+
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 195 ACGKCGDLETGRLIHSVAI---RHGM-CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
K G + + I R+ M C+S NSI+ + K G+ A + ++ M E
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY---NSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 251 ---------------------------------------DSVTWNAIITGFCQNGDIEQA 271
D + A+I GFC+ D++ A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
F + E G+ P + +N LI+ + LG+ D A+DL +KM + G++ D++T+++MI G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
+ G A DL ++L G+ P+ I +H +
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEI--------------------LHMV--------- 770
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYS----WNTIIGGYCHAGFCGKAYELFM 447
L++ SK G A ++ + M ++DV ++T+I G+ G +A+ L
Sbjct: 771 ------LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHD 824
Query: 448 KMQDSDSPPNVVTWNALITGYMQ 470
+M + + +N L++G ++
Sbjct: 825 EMLEKGIVHDDTVFNLLVSGRVE 847
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 162/384 (42%), Gaps = 33/384 (8%)
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW----NAIITGFCQNGDIE 269
R G + R N ++ Y + M +A F M +R V + N +++ ++ I+
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLID 221
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
+A++ ++ M GV VT +L+ + + + + AV + R++ S G PD +S +
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 330 SGFTQKGRTYHALDLLRKM-----LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+ ALDLLR+M + + E + + E+ G G+
Sbjct: 282 QAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI 341
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCG 440
MS V+ SL++ Y K +L A +F+ M E D ++ ++ +C
Sbjct: 342 PMS----VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEME 397
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW--- 497
KA E +M+M+ P+ V + +I G +++ + + AL++F + SW
Sbjct: 398 KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF---------NDSFESWIAH 448
Query: 498 ----NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
N + F + G+ D A + M+ I PN V +++ A + + I
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 554 CALRRNLVSEISVSNILIDSYAKS 577
L + L +ILID + K+
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKN 532
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 104/240 (43%), Gaps = 9/240 (3%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL-HARIGLVGNVNPFVE 123
G AV ++E G +T+ +L+ + +++ E+ H + ++
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
L+ + K + A +F E+ E N+ ++++I + +DL+ MV
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G D F ++ K G++ ++S + G+ ++ ++ +K G+
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 240 AKKLFKSMDERDS----VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
A K+ + M ++D + ++ +I G + G++ +A + D M E+G+ +N+L++
Sbjct: 784 ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 204/481 (42%), Gaps = 56/481 (11%)
Query: 127 VSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
+ + K G + A K F E+ L T+++MIG + +E V++F + ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 183 LPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
+P + ++ G G + + G S+ N I+ K G++ A K
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 243 LFKSMDERDSV----TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
+F+ M ++D+ T+N +I C+ G ++ A + D+MQ+ G+ P + T NI++
Sbjct: 365 VFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+ + D A + +M+ TPD T+ S+I G + GR A + KML S NSI
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
+I+ + + D+ N+ +D K G+ E + +F+ +
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 419 YER---------------------------------------DVYSWNTIIGGYCHAGFC 439
R D ++N +I G+C G
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
KAY+L +M+ P VVT+ ++I G + D+A LF+ K +I+ NV ++S
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSS 662
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN-------LVAGKKVKEIH 552
LI GF + G+ D+A I + + PN T S+L A LV + +KE+
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 553 C 553
C
Sbjct: 723 C 723
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 203/485 (41%), Gaps = 65/485 (13%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQG--SKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
++ LC G L A + DS+ + G VR + M +DR C ++L +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM------VDRLC--KSQKLDEACAMF 435
Query: 116 GNVNPFVET-------KLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSRE 164
++ V T L+ K G + +A KV+++M + N ++++I
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVN 224
E+ ++ DM+ PD LL + K G+ E GR + R
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQE 280
+ ++ K G +LF SM E+ D+ +N +I GFC+ G + +A + + M+
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
+G EP +VT+ +I ++ R D A L + +S + +V +SS+I GF + GR
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
A +L +++ G+ PN + T NSL+D
Sbjct: 676 AYLILEELMQKGLTPN-----------------------------------LYTWNSLLD 700
Query: 401 MYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
K ++ A F M E + ++ +I G C KA+ + +MQ P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+ +++ +I+G ++G +A LF R + +G + + A +N++I G + A +
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVP-DSACYNAMIEGLSNGNRAMDAFSL 819
Query: 517 FRRMQ 521
F +
Sbjct: 820 FEETR 824
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 211/493 (42%), Gaps = 17/493 (3%)
Query: 63 SNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV 122
S G +A ++L+ +GS I Y N + +C+ R +V L + + P +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAY-NCILTCL-RKMGKVDEALKVFEEMKKDAAPNL 377
Query: 123 ETK--LVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEVVDLFYD 176
T L+ M + G L A ++ D M++ LF T + M+ + + +E +F +
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
M PDE ++ GK G ++ ++ + ++ V S++ + G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 237 MGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
K++K M + D N + + G+ E+ R F+ ++ P +++I
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI + G + +L M+ G D ++ +I GF + G+ A LL +M G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
EP +T + + +V+ +SLID + K G ++ A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 413 RIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
I + + ++ ++Y+WN+++ A +A F M++ PN VT+ LI G
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 469 MQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
+ ++A ++ ++K G +K + S+ ++I+G ++G +A +F R + P+
Sbjct: 738 CKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 529 SVTVLSILPAFAN 541
S +++ +N
Sbjct: 797 SACYNAMIEGLSN 809
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 209/502 (41%), Gaps = 82/502 (16%)
Query: 115 VGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRE---RNLFT-WSAMIGACSREKSWE 168
V P V T ++V K L E V MR+ R F+ ++ +IGA S +
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 169 EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
++ LF M G+ P L +++ K GR+ ++++ M SS
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAK-----EGRVDSALSLLDEMKSS-------- 232
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
S+D D V +N I F + G ++ A K+F ++ G++P V
Sbjct: 233 -----------------SLDA-DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+ +I + R D AV++ +E P Y +++MI G+ G+ A LL +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
G P+ V+ N ++ K G +
Sbjct: 335 RAKGSIPS-----------------------------------VIAYNCILTCLRKMGKV 359
Query: 409 EAAQRIFDMMYER---DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
+ A ++F+ M + ++ ++N +I C AG A+EL MQ + PNV T N ++
Sbjct: 360 DEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKI-KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ 524
+S D+A +F+ E D K+ + ++ SLI G + G+ D A +++ +M
Sbjct: 420 DRLCKSQKLDEACAMFE--EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 525 IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
NS+ S++ F N + +I+ + +N ++ + N +D K+G R
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 585 RIFDGLPLK----DIISWNIML 602
+F+ + + D S++I++
Sbjct: 538 AMFEEIKARRFVPDARSYSILI 559
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 44/310 (14%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
T+ +L++C G+++H +I G G+V +V L+ +Y CG L ARKVFD
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDV--YVNNGLIHLYGSCGCLDLARKVFD 210
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
EM ER+L +W++MI A R ++ + LF +M R F PD + + +L AC G L
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSL 269
Query: 205 GRLIHSVAIRH---GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
G H+ +R + + V NS++ +Y KCG + A+++F+ M +RD +WNA+I G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 262 FCQNGDIEQARKYFDAM--QEEGVEPGLVTWNILIASYNQLGRCDIA---VDLMRK---- 312
F +G E+A +FD M + E V P VT+ L+ + N G + D+M +
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 313 ---MESFG-----------------------LTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+E +G + PD W S++ +KG + + +
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 347 KMLLSGVEPN 356
+ ++ E N
Sbjct: 450 RNIIGTKEDN 459
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 192/450 (42%), Gaps = 89/450 (19%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSW-EEVVDLFYDMVR 179
F+ K++ + S ++ A +VFD + + F W+ +I AC+ + S EE L+ M+
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 180 HG-FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
G PD+ P +L+AC G+ +H ++HG + VNN ++ +Y CG
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--- 200
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
C ++ ARK FD M E LV+WN +I +
Sbjct: 201 ------------------------C----LDLARKVFDEMPERS----LVSWNSMIDALV 228
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMIS-----GFTQKGRTYHALDLLRKMLLSGV 353
+ G D A+ L R+M+ PD YT S++S G G HA LLRK
Sbjct: 229 RFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAF-LLRKC----- 281
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
+ V M DVL NSLI+MY KCG L A++
Sbjct: 282 ---------------------------DVDVAM----DVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 414 IFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD--SDSPPNVVTWNALITGYMQS 471
+F M +RD+ SWN +I G+ G +A F +M D + PN VT+ L+
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G ++ F + +D I+ + + ++ ++G +A+ + M + P++V
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM---PMKPDAVI 427
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLV 561
S+L A A ++ E + RN++
Sbjct: 428 WRSLLDACCKKGASVELSE----EIARNII 453
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 46/245 (18%)
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH-AGFCGKAYELFMKM-QDSDSP 455
++ + S D+ A R+FD + + WNT+I H +A+ L+ KM + +S
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 148
Query: 456 PNVVTW-----------------------------------NALITGYMQSGAEDQALDL 480
P+ T+ N LI Y G D A +
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
F D +R++ SWNS+I ++ G+ D A+Q+FR MQ P+ T+ S+L A A
Sbjct: 209 F-----DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACA 262
Query: 541 NLVAGKKVKEIHCCALRR---NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIIS 597
L + H LR+ ++ ++ V N LI+ Y K G+L + ++F G+ +D+ S
Sbjct: 263 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS 322
Query: 598 WNIML 602
WN M+
Sbjct: 323 WNAMI 327
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 205/484 (42%), Gaps = 50/484 (10%)
Query: 133 CGH--LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLP 190
CG L EA ++ ++ T+ +I CS+ ++ EE + + GF+P +
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 191 KILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER 250
++L+ KCG L R + +CS N ++ YA+ G + A+KLF M E+
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSW----NVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 251 DSVTWNAIITGFCQNGDIEQARKYFDAMQE------------------------------ 280
DS +W A++TG+ + E+A + MQ
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 281 ------EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
G++ V W+ L+ Y + G D A ++ K+ + DV +W+SMI + +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFK 296
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
R L +++ S PN T ++HG ++
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
+SL+DMY+KCG++E+A+ + D + D+ SW ++IGG G +A + F + S +
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
P+ VT+ +++ +G ++ L+ F I + ++ + L+ +SG+ ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSY 574
+ M +VL + N+ ++ + N V+ ++++NI Y
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANI----Y 532
Query: 575 AKSG 578
A +G
Sbjct: 533 AAAG 536
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 228/559 (40%), Gaps = 89/559 (15%)
Query: 17 SIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDS 76
++ S+ AS F + N + + L ++ LC L +AV +L
Sbjct: 20 NLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLG- 78
Query: 77 LAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV-ETKLVSMYSKCGH 135
+ K TY NL+Q C +E G+++H I G V V +L+ MY+KCG
Sbjct: 79 ---RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGS 135
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH----------GFL-- 183
L +ARKVFDEM R+L +W+ M+ + EE LF +M G++
Sbjct: 136 LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 184 --PDEFLL------------PKILQAC--------GKCGDLETGRLIHSVAIRHGMCSSI 221
P+E L+ P I KC + G+ IH +R G+ S
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC--IRRGKEIHGHIVRAGLDSDE 253
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN--------------GD 267
+ +S+M +Y KCG + A+ +F + E+D V+W ++I + ++ G
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 268 IEQARKYF---------DAMQEE------------GVEPGLVTWNILIASYNQLGRCDIA 306
E+ +Y D EE G +P + L+ Y + G + A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 307 VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXX 366
++ PD+ +W+S+I G Q G+ AL +L SG +P+ +T
Sbjct: 374 KHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 367 XXXXXXXXXXXE-IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF-DMMYERDVY 424
E + I K L L+D+ ++ G E + + +M + +
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF 489
Query: 425 SWNTIIGG---YCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLF 481
W +++GG Y + +A + K++ P N VT+ + Y +G ++ +
Sbjct: 490 LWASVLGGCSTYGNIDLAEEAAQELFKIE----PENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 482 KRIEKDGKIKRNVASWNSL 500
KR+++ G KR +SW +
Sbjct: 546 KRMQEIGVTKRPGSSWTEI 564
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 70/281 (24%)
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFM 447
V ++ N L+ MY+KCG L A+++FD M RD+ SWN ++ GY G +A +LF
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS----------- 496
+M + DS +W A++TGY++ ++AL L+ +++ + N+ +
Sbjct: 176 EMTEKDS----YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAV 231
Query: 497 ------------------------WNSLIAGFLQSGQKDKAMQIFRRM------------ 520
W+SL+ + + G D+A IF ++
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 521 -QFFQIA------------------PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLV 561
++F+ + PN T +L A A+L + K++H R
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 562 SEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
S+ L+D Y K GN+ ++ + DG P D++SW ++
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI 392
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 397 SLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
+LI + S+ LE +++ + + + + WN ++ Y G A ++F +M +
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
D + +WN ++ GY + G ++A LF D +++ SW +++ G+++ Q ++
Sbjct: 150 D----LCSWNVMVNGYAEVGLLEEARKLF-----DEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 513 AMQIFRRMQFFQIA-PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILI 571
A+ ++ MQ + PN TV + A A + ++ KEIH +R L S+ + + L+
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 572 DSYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQ 604
D Y K G + +R IFD + KD++SW M+ +
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 176/424 (41%), Gaps = 37/424 (8%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V L+S+Y+KCG L +A K+FDEM R++ + + + R + E L M+ G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
D L +L C ++IH++AI G I V N ++ Y KCG +
Sbjct: 152 GF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW----------- 290
+F M R+ +T A+I+G +N E + F M+ V P VT+
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 291 --------NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT------------WSSMIS 330
+ L+ Y I LM G D +T + ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 331 GFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD 390
G Q G A+ +ML +GVE ++ V ++H + +K
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
+ N LI+MYSKCGDL +Q +F M +R+ SWN++I + G A +L+ +M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI-----AGFL 505
+ P VT+ +L+ G D+ +L +++ I+ + +I AG L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 506 QSGQ 509
+ +
Sbjct: 511 KEAK 514
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 186/461 (40%), Gaps = 92/461 (19%)
Query: 219 SSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+++ V NS++++YAKCG++ A KLF M RD ++ N + GF +N + E M
Sbjct: 88 NALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM 147
Query: 279 QEEG----------------VEPGLVT------------------WNILIASYNQLGRCD 304
G E LVT N LI SY + G C
Sbjct: 148 LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCG-CS 206
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
++ R + +V T +++ISG + L L M V PNS+T
Sbjct: 207 VS---GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVY 424
+IH + K + ++ ++L+DMYSKCG +E A IF+ E D
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDS--DSPPNVVTW--------------------- 461
S I+ G G +A + F++M + + NVV+
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 462 ------------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
N LI Y + G + +F+R+ K RN SWNS+IA F + G
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK-----RNYVSWNSMIAAFARHGH 438
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKK-------VKEIHCCALRRNLVS 562
A++++ M ++ P VT LS+L A +++ K +KE+H R +
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498
Query: 563 EISVSNILIDSYAKSGNLMYSRRIFDGLPLK-DIISWNIML 602
I ID ++G L ++ D LPLK D W +L
Sbjct: 499 CI------IDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 133/252 (52%), Gaps = 2/252 (0%)
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPF-VETKLVSMYSKCGHLSEARKVFDE 145
+TY++ L +C I G+++HA + G + +E+ L+ MYSKCG + +A +F+
Sbjct: 257 VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Query: 146 MRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG 205
E + + + ++ ++ S EE + F M++ G D ++ +L L G
Sbjct: 317 TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQN 265
+ +HS+ I+ + VNN ++ +Y+KCG++ ++ +F+ M +R+ V+WN++I F ++
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDVYT 324
G A K ++ M V+P VT+ L+ + + +G D +L+ +M E G+ P
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH 496
Query: 325 WSSMISGFTQKG 336
++ +I + G
Sbjct: 497 YTCIIDMLGRAG 508
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 153/380 (40%), Gaps = 57/380 (15%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V KL++ Y KCG R VFD M RN+ T +A+I + E+ + LF M R
Sbjct: 192 VGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL 251
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P+ L AC + G+ IH++ ++G+ S + + +++M +Y+KCG + A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP---------------- 285
+F+S E D V+ I+ G QNG E+A ++F M + GVE
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 286 --GL-----------------VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
GL N LI Y++ G + + R+M + +W+
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK----RNYVSWN 427
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX-------XXXXXXXEI 379
SMI+ F + G AL L +M V+P +T E+
Sbjct: 428 SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEV 487
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGGYCHAGF 438
HGI + +IDM + G L+ A+ D + + D W ++G G
Sbjct: 488 HGIEPRTEHY------TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGD 541
Query: 439 CG----KAYELFMKMQDSDS 454
A +LF DS S
Sbjct: 542 TEVGEYAAEQLFQTAPDSSS 561
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 161/379 (42%), Gaps = 47/379 (12%)
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
G C + I + ++F+ + + LV WN L++ Y + G+ A+ L +M
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMP----MR 119
Query: 321 DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIH 380
DV + + + GF + T LL++ML SG ++ T+ IH
Sbjct: 120 DVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLTIVLSVCDTPEFCLVTKMIH 178
Query: 381 GIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCG 440
+ + ++ GN LI Y KCG + + +FD M R+V + +I G
Sbjct: 179 ALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHE 238
Query: 441 KAYELFMKMQDSDSPPNVVTW-----------------------------------NALI 465
LF M+ PN VT+ +AL+
Sbjct: 239 DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
Y + G+ + A +F+ + ++ V ++ G Q+G +++A+Q F RM +
Sbjct: 299 DMYSKCGSIEDAWTIFESTTEVDEVSMTV-----ILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 526 APNSVTVLSILP-AFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSR 584
++ V ++L +F + G K++H ++R V+N LI+ Y+K G+L S+
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLG-KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 585 RIFDGLPLKDIISWNIMLS 603
+F +P ++ +SWN M++
Sbjct: 413 TVFRRMPKRNYVSWNSMIA 431
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 431 GGYCHAGFCGKAYEL----FMKMQDSDSPPN-VVTWNALITGYMQSGAEDQALDLFKRIE 485
G + H G C A + F + D+D N +V WN+L++ Y + G A+ LF
Sbjct: 58 GWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLF---- 113
Query: 486 KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM---QFFQIAPNSVTVLSI--LPAFA 540
D R+V S N + GFL++ + + + +RM F A ++ VLS+ P F
Sbjct: 114 -DEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTI-VLSVCDTPEFC 171
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNI 600
+ K IH A+ EISV N LI SY K G + R +FDG+ +++I+
Sbjct: 172 LVT-----KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTA 226
Query: 601 MLS 603
++S
Sbjct: 227 VIS 229
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 207/493 (41%), Gaps = 44/493 (8%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
LP + + L L + ++ A A+ +++ E G IT+ +L SC
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF---------- 249
Query: 108 LHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSR 163
K G L K++ EM+ RN+ T++ +I S+
Sbjct: 250 ------------------------KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSK 285
Query: 164 EKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRV 223
EE DM R GF + +++ K G + + + G+ +
Sbjct: 286 NGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTST 345
Query: 224 NNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
N + G + A++L SM D V++N ++ G+ + G +A FD ++ +
Sbjct: 346 YNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P +VT+N LI + G + A L +M + + PDV T+++++ GF + G A +
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS-LVDDVLTGNSLIDMY 402
+ +ML G++P+ +H V D+ N ID
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 403 SKCGDL----EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNV 458
K G+L E ++IF + D ++ T+I GY G A L+ +M P+V
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
+T+ LI G+ ++G +QA ++K G ++ NV + N+L+ G ++G D+A +
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRG-VRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 519 RMQFFQIAPNSVT 531
+M+ I PN +
Sbjct: 645 KMEEEGIPPNKYS 657
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 181/415 (43%), Gaps = 12/415 (2%)
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F M+R GFLP +L+ + ++ I HG+ ++ N+++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 234 CGEMGFAKKLFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G++ K++ M R+ VT+N +I GF +NG +E+AR++ M+ G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+N LI Y + G D A + +M + G+ P T++ I GR A +LL M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
V + + ++ + S+V T N+LID + G+LE
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV----TYNTLIDGLCESGNLE 426
Query: 410 AAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
AQR+ + M + DV ++ T++ G+ G A E++ +M P+ +
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
G ++ G D+A L + + ++ +N I G + G KA++ R++ +
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 526 APNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
P+ VT +++ + K + ++ LR+ L + +LI +AK+G L
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 198/446 (44%), Gaps = 20/446 (4%)
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
++ M+ HG +P +L +C K GDLE I R + S N ++ ++
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 233 KCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
K G+M A++ M ++N +I G+C+ G + A D M G+ P
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T+NI I + GR D A +L+ M + PDV ++++++ G+ + G+ A L +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
+ P+ +T + + DV+T +L+ + K G+L
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 409 EAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSD-SPPNVVTWNA 463
A ++D M + D Y++ T G G KA+ L +M +D P++ +N
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
I G + G +A++ ++I + G + +V ++ ++I G+L++GQ A ++ M
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV-TYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
++ P+ +T ++ A ++ + +R + + N L+ K+GN+ +
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 584 RRIF-----DGLPLKDIISWNIMLSQ 604
R +G+P + S+ +++S+
Sbjct: 640 YRYLCKMEEEGIP-PNKYSYTMLISK 664
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 65/352 (18%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL----VG 116
LC G + DA +L S+A ++Y L+ I ++G+ + A + G
Sbjct: 353 LCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYI-----KMGKFVEASLLFDDLRAG 403
Query: 117 NVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEV 170
+++P + T L+ + G+L A+++ +EM + +F T++ ++ + +
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHS--VAIRH------------- 215
+++ +M+R G PD + + GD + +H VA H
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 216 GMCSSIRVNNSIMAV------------------------YAKCGEMGFAKKLFKSMDER- 250
G+C +V N + A+ Y + G+ A+ L+ M +
Sbjct: 524 GLC---KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 251 ---DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV 307
+T+ +I G + G +EQA +Y M++ GV P ++T N L+ + G D A
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 308 DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+ KME G+ P+ Y+++ +IS + + L ++ML +EP+ T
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 142/622 (22%), Positives = 255/622 (40%), Gaps = 100/622 (16%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRE 107
+PY +D LC + +AV I LA + K +TY L+ E+G E
Sbjct: 263 VPYNVLIDG----LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 108 L-HARIGLVGNVNPFVETKLVSMYSKCGHLSEA----RKVFDEMRERNLFTWSAMIGACS 162
+ + L + + + LV K G + EA ++V D NLF ++A+I +
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ + + E LF M + G P++ ++ + G L+T + G+ S+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 223 VNNSIMAVYAKCGEM----GFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQAR------ 272
NS++ + K G++ GF ++ E VT+ +++ G+C G I +A
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 273 -----------------------------KYFDAMQEEGVEPGLVTWNILIASYNQLGRC 303
K F+ M E V+P VT+N++I Y + G
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 304 DIAVDLMRKMESFGLTPDVYTW-----------------------------------SSM 328
A + +++M G+ PD Y++ + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPN----SITVXXXXXXXXXXXXXXXXXEIHGIGV 384
+ GF ++G+ AL + ++M+ GV+ + + + E+H G+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCG 440
K DDV+ S+ID SK GD + A I+D+M + ++ +I G C AGF
Sbjct: 679 K---PDDVIY-TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED--QALDLFKRIEKDGKIKRNVASWN 498
+A L KMQ S PN VT+ + + G D +A++L I K + N A++N
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKG--LLANTATYN 791
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
LI GF + G+ ++A ++ RM ++P+ +T +++ KK E+ +
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 559 NLVSEISVSNILIDSYAKSGNL 580
+ + N LI +G +
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEM 873
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 178/386 (46%), Gaps = 11/386 (2%)
Query: 153 TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVA 212
T SA++ + + + ++LF DMV G PD ++ ++++ + DL + + +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGE----MGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
G +I N ++ K + +G K L + D VT+ ++ G C+ +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
E + D M P + L+ + G+ + A++L++++ FG++P+++ ++++
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 329 ISGFTQKGRTYHALDLL-RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
I KGR +H +LL +M G+ PN +T G V
Sbjct: 374 IDSLC-KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQ----RIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
L V NSLI+ + K GD+ AA+ + + E V ++ +++GGYC G KA
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
L+ +M P++ T+ L++G ++G A+ LF + + +K N ++N +I G
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEG 551
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNS 529
+ + G KA + + M I P++
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDT 577
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 160/412 (38%), Gaps = 89/412 (21%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG----- 116
C G +S A L + E+G + P TY + I C+ G+ A++ + G
Sbjct: 553 CEEGDMSKAFEFLKEMTEKG--IVPDTYS--YRPLIHGLCL-TGQASEAKVFVDGLHKGN 607
Query: 117 -NVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVV 171
+N T L+ + + G L EA V EM +R +L + +I + K +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
L +M G PD+ + ++ A K GD + I + I G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP------------ 715
Query: 232 AKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
+ VT+ A+I G C+ G + +A MQ P VT+
Sbjct: 716 -------------------NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 292 ILIASYNQLGRCDI--AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+ + G D+ AV+L + GL + T++ +I GF ++GR A +L+ +M+
Sbjct: 757 CFLDILTK-GEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
GV P D +T ++I+ + D++
Sbjct: 815 GDGVSP-----------------------------------DCITYTTMINELCRRNDVK 839
Query: 410 AAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN 457
A +++ M E+ D ++NT+I G C AG GKA EL +M PN
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/571 (20%), Positives = 241/571 (42%), Gaps = 43/571 (7%)
Query: 29 IASTRVHANSNYVSMSIRSLPYPKFMD--AQLNQLCSNGPLSDAVAILDSLAEQGSKVRP 86
++ ++ S +S+ + P P + +N C G + A + + ++G +
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDE 145
I Y L+ + +G +L ++ G ++ V + + +Y K G L+ A V+
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 146 MR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
M N+ T++ +I ++ E ++ +++ G P ++ KCG+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
L +G A+Y +MG+ D V + ++ G
Sbjct: 442 LRSG----------------------FALYEDMIKMGYPP---------DVVIYGVLVDG 470
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
+ G + A ++ M + + +V +N LI + +L R D A+ + R M +G+ PD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V T+++++ +GR AL L +M G+EP+++ ++
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAG 437
+ + + D+ N +I + KC +E A + F+ + E D+ ++NT+I GYC
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
+A +F ++ + PN VT LI ++ D A+ +F + + G K N ++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTY 709
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALR 557
L+ F +S + + ++F MQ I+P+ V+ I+ + I A+
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
L+ ++ ILI Y K G L+ + +++
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 204/443 (46%), Gaps = 39/443 (8%)
Query: 180 HGFLPDE-FLLPKILQACGKCGDLETGRLIHSVAIRHGMCS-----------SIRVNNSI 227
HGF+ D F ++ +A L+ RL+ R G+ S I V + +
Sbjct: 220 HGFVLDALFCKGEVTKA------LDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRL 273
Query: 228 MAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
+++ CG + VT+ +I GFC+ G++++A F M++ G+EP L
Sbjct: 274 LSLVLDCGP------------APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
+ ++ LI Y + G + L + G+ DV +SS I + + G A + ++
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGD 407
ML G+ PN +T ++G +K + ++T +SLID + KCG+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 408 LEAAQRIFD----MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
L + +++ M Y DV + ++ G G A +KM NVV +N+
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
LI G+ + D+AL +F+ + G IK +VA++ +++ + G+ ++A+ +F RM
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
+ P+++ +++ AF + ++ R + ++I+V N++I K + +
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 584 RRIF----DGLPLKDIISWNIML 602
+ F +G DI+++N M+
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMI 643
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/549 (22%), Positives = 230/549 (41%), Gaps = 46/549 (8%)
Query: 1 MEKCLIILPTKSRPPLSIPSYSASQF--EFIASTRVHANSNYVSMSIRSLPYPKFMDAQ- 57
++K L I ++ + IP S + I S RV +++ R P + A
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 58 --LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
L+ L G ++ A+ + E+G +V ++ +L+ + D IEV
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVA---------- 270
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
++L+S+ CG N+ T+ +I + + DLF
Sbjct: 271 --------SRLLSLVLDCGPAP------------NVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M + G PD ++ K G L G + S A+ G+ + V +S + VY K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 236 EMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
++ A ++K M + VT+ +I G CQ+G I +A + + + G+EP +VT++
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
LI + + G L M G PDV + ++ G +++G HA+ KML
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
+ N + ++ + + DV T +++ + G LE A
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 412 Q----RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
R+F M E D ++ T+I +C +LF MQ + ++ N +I
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
+ + A F + +GK++ ++ ++N++I G+ + D+A +IF ++ P
Sbjct: 611 LFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 528 NSVTVLSIL 536
N+VT L+IL
Sbjct: 670 NTVT-LTIL 677
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 153/380 (40%), Gaps = 19/380 (5%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGL 114
++ C G L A+ + + + G + Y L+ + G LHA + +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ-----GLMLHAMRFSVKM 487
Query: 115 VGN---VNPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
+G +N V L+ + + EA KVF M + ++ T++ ++ E
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
EE + LF+ M + G PD ++ A K G + + R+ + + I V N +
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 228 MAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + KC + A K F ++ E D VT+N +I G+C +++A + F+ ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
P VT ILI + D A+ + M G P+ T+ ++ F++ +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
L +M G+ P+ ++ I + L+ DV+ LI Y
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 404 KCGDLEAAQRIFDMMYERDV 423
K G L A +++ M V
Sbjct: 788 KVGRLVEAALLYEHMLRNGV 807
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 37/238 (15%)
Query: 126 LVSMYSKCGHLSEARKVFDEM----RERNLFTWSAMI-GACSREKSWEEVVDLFYDMVRH 180
++ + KC + +A K F+ + E ++ T++ MI G CS + +E +F +
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR-LDEAERIFELLKVT 665
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
F P+ L LIH + + M +IR+ SIMA E G
Sbjct: 666 PFGPNTVTLTI---------------LIHVLCKNNDMDGAIRMF-SIMA------EKG-- 701
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
+ ++VT+ ++ F ++ DIE + K F+ MQE+G+ P +V+++I+I +
Sbjct: 702 -------SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
GR D A ++ + L PDV ++ +I G+ + GR A L ML +GV+P+ +
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 169/402 (42%), Gaps = 40/402 (9%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACS---REKSWEEVVDLFYDMVRH 180
K + S GHL A VF N + + MI A S + + ++ +
Sbjct: 51 AKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWAL 110
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
PD F P +L+ + D+ GR IH + G SS+ V ++ +Y CG +G
Sbjct: 111 CAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLG-- 168
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
ARK FD M + V WN L+A Y ++
Sbjct: 169 -----------------------------DARKMFDEMLVKDVN----VWNALLAGYGKV 195
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
G D A L+ M + + +W+ +ISG+ + GR A+++ ++ML+ VEP+ +T+
Sbjct: 196 GEMDEARSLLEMMPCW--VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
I + V N++IDMY+K G++ A +F+ + E
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
R+V +W TII G G +A +F +M + PN VT+ A+++ G D L
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
F + I N+ + +I ++G+ +A ++ + M F
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 35/316 (11%)
Query: 68 SDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKL 126
S A+ + L +K T+ +L+ + + GR++H ++ + G + + V T L
Sbjct: 98 SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGL 157
Query: 127 VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSR--------------------EKS 166
+ MY CG L +ARK+FDEM +++ W+A++ + E S
Sbjct: 158 IQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVS 217
Query: 167 W-------------EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
W E +++F M+ PDE L +L AC G LE G I S
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARK 273
GM ++ +NN+++ +YAK G + A +F+ ++ER+ VTW II G +G +A
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 274 YFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGF 332
F+ M + GV P VT+ ++++ + +G D+ L M S +G+ P++ + MI
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 333 TQKGRTYHALDLLRKM 348
+ G+ A ++++ M
Sbjct: 398 GRAGKLREADEVIKSM 413
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 320 PDVYTWSSMISGFT---QKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
P+ Y ++MI + + A+ + RK+ +P++ T
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHA 436
+IHG V V LI MY CG L A+++FD M +DV
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV------------- 182
Query: 437 GFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVAS 496
NV WNAL+ GY + G D+A L + + RN S
Sbjct: 183 --------------------NV--WNALLAGYGKVGEMDEARSLLEMMPC---WVRNEVS 217
Query: 497 WNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCAL 556
W +I+G+ +SG+ +A+++F+RM + P+ VT+L++L A A+L + + + I
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 557 RRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
R + +S++N +ID YAKSGN+ + +F+ + +++++W +++
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 131/259 (50%), Gaps = 6/259 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFV 122
+G S+A+ + + + + +T + +L +C D +E+G + + + G N +
Sbjct: 228 SGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSL 287
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
++ MY+K G++++A VF+ + ERN+ TW+ +I + E + +F MV+ G
Sbjct: 288 NNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGV 347
Query: 183 LPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P++ IL AC G ++ G RL +S+ ++G+ +I ++ + + G++ A
Sbjct: 348 RPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREAD 407
Query: 242 KLFKSMD-ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS-YNQ 299
++ KSM + ++ W +++ + D+E + + + +EP +L+A+ Y+
Sbjct: 408 EVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK--LEPNNSGNYMLLANLYSN 465
Query: 300 LGRCDIAVDLMRKMESFGL 318
LGR D + + M+ G+
Sbjct: 466 LGRWDESRMMRNMMKGIGV 484
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM--YERDVYSWNTIIGGYCHAGFCGKAYEL 445
LV DV N+L+ Y K G+++ A+ + +MM + R+ SW +I GY +G +A E+
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 446 FMKMQDSDSPPNVVTW-----------------------------------NALITGYMQ 470
F +M + P+ VT NA+I Y +
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
SG +ALD+F+ + + RNV +W ++IAG G +A+ +F RM + PN V
Sbjct: 298 SGNITKALDVFECVNE-----RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 531 TVLSILPAFANLV---AGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
T ++IL A +++ GK++ + + + I +ID ++G L + +
Sbjct: 353 TFIAILSACSHVGWVDLGKRL--FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 588 DGLPLK 593
+P K
Sbjct: 411 KSMPFK 416
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 228/513 (44%), Gaps = 25/513 (4%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCI-DRDCIEVGRELHARIGLVG 116
L G L A L + E G + +Y L+ + R C E E++ R+ L G
Sbjct: 160 FKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE-AMEVYRRMILEG 218
Query: 117 NVNPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEV 170
P ++T L+ K + + EM + N++T++ I R E
Sbjct: 219 -FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNN-SIMA 229
++ M G PD ++ A L+ + + ++ G RV +++
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE-KMKTGRHKPDRVTYITLLD 336
Query: 230 VYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
++ ++ K+ + M++ D VT+ ++ C+ G+ +A D M+++G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
L T+N LI ++ R D A++L MES G+ P YT+ I + + G + AL+
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK-MSLVDDVLTGNSLIDMYSK 404
KM G+ PN + +I G+K + LV D +T N ++ YSK
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 405 CGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
G+++ A ++ M E DV N++I A +A+++FM+M++ P VVT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+N L+ G ++G +A++LF+ + + G N ++N+L ++ + A+++ +M
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
P+ T +I+ LV +VKE C
Sbjct: 635 MDMGCVPDVFTYNTII---FGLVKNGQVKEAMC 664
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 133/572 (23%), Positives = 255/572 (44%), Gaps = 63/572 (11%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
++ LC G +A LD + +QG TY L+ + ++ EL + +G
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG- 428
Query: 118 VNPFVETKLV--SMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVV 171
V P T +V Y K G A + F++M+ + N+ +A + + ++ E
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
+FY + G +PD +++ K G+++ + S + +G + V NS++
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 232 AKCGEMGFAKKLFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
K + A K+F M E VT+N ++ G +NG I++A + F+ M ++G P
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
+T+N L + +A+ ++ KM G PDV+T++++I G + G+ A+ +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDV--LTGNSLIDMYSKC 405
M V P+ +T+ + G+ VK SL++D + N L + +
Sbjct: 669 M-KKLVYPDFVTLCTL---------------LPGV-VKASLIEDAYKIITNFLYNCADQP 711
Query: 406 GDLEAAQRIFDMMYERDV-----YSWNTIIGGYCHAG---------------FCGKAYEL 445
+L I ++ E + +S + G C G A L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 446 FMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
F K +D P + T+N LI G +++ + A D+F +++ G I +VA++N L+ +
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP-DVATYNFLLDAY 830
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
+SG+ D+ ++++ M + N++T ++ + LV V + L +L+S+
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVI---SGLVKAGNVDD--ALDLYYDLMSDR 885
Query: 565 SVSNI------LIDSYAKSGNLMYSRRIFDGL 590
S LID +KSG L ++++F+G+
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 168/385 (43%), Gaps = 53/385 (13%)
Query: 133 CGH--LSEARKVFDEMR-----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
C H +S AR +F++ + L T++ +IG E D+F + G +PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
+L A GK G ++ ++ H ++ +N +++ K G + A L+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 246 S-MDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
M +RD + T+ +I G ++G + +A++ F+ M + G P +NILI + +
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITV 360
G D A L ++M G+ PD+ T+S ++ GR L +++ SG+ P
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP----- 994
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
DV+ N +I+ K LE A +F+ M
Sbjct: 995 ------------------------------DVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 421 R-----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
D+Y++N++I AG +A +++ ++Q + PNV T+NALI GY SG +
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 476 QALDLFKRIEKDGKIKRNVASWNSL 500
A +++ + G N ++ L
Sbjct: 1085 HAYAVYQTMVTGG-FSPNTGTYEQL 1108
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/570 (21%), Positives = 238/570 (41%), Gaps = 40/570 (7%)
Query: 65 GPLSDAVAILDSLAEQGSK-VRP------ITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
G D+V+ L++ + +K + P + +L ++ DR+ ++ L IGLV +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK-DIGLVPD 502
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDL 173
+ ++ YSK G + EA K+ EM E ++ +++I + +E +
Sbjct: 503 SVTY--NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F M P +L GK G ++ + ++ G + N++ K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 234 CGEMGFA-KKLFKSMDE---RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
E+ A K LFK MD D T+N II G +NG +++A +F M++ V P VT
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT 679
Query: 290 WNILIASYNQLGRCDIAVDLMRK-MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
L+ + + A ++ + + P W +I + +A+ ++
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 349 LLSGV--EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCG 406
+ +G+ + +SI V + + + T N LI +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 407 DLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
+E AQ +F + DV ++N ++ Y +G + +EL+ +M + N +T N
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
+I+G +++G D ALDL+ + D ++ LI G +SG+ +A Q+F M
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE-----ISVSNILIDSYAKS 577
+ PN ++ F GK + CAL + +V E + ++L+D
Sbjct: 920 YGCRPNCAIYNILINGF-----GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 578 G----NLMYSRRIFDGLPLKDIISWNIMLS 603
G L Y + + + D++ +N++++
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 212/528 (40%), Gaps = 57/528 (10%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
L L NG + +A+ + + + ++G IT+ L D + + ++ ++ +G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 118 V-NPFVETKLVSMYSKCGHLSEARKVFDEMRE---------------------------- 148
V + F ++ K G + EA F +M++
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 149 ------------RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL--PDEFLLPKILQ 194
NLF W +IG+ E + V +V +G D L+P I
Sbjct: 700 ITNFLYNCADQPANLF-WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 195 ACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER--- 250
+C K ++ R L G+ + N ++ + + A+ +F +
Sbjct: 759 SC-KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 251 -DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
D T+N ++ + ++G I++ + + M E +T NI+I+ + G D A+DL
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 310 MRK-MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
M +P T+ +I G ++ GR Y A L ML G PN
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 369 XXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVY 424
+ VK + D+ T + L+D G ++ F + E DV
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 425 SWNTIIGGYCHAGFCGKAYELFMKMQDSDS-PPNVVTWNALITGYMQSGAEDQALDLFKR 483
+N II G + +A LF +M+ S P++ T+N+LI +G ++A ++
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
I++ G ++ NV ++N+LI G+ SG+ + A +++ M +PN+ T
Sbjct: 1058 IQRAG-LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 169/414 (40%), Gaps = 48/414 (11%)
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF-KSMDERDSVTWNAIITGFCQN 265
L+H+ + M ++RV+ K EM + L K + +RD+ T+ I
Sbjct: 114 LVHTTETCNYMLEALRVD-------GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVK 166
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G ++QA M+E G ++N LI + C A+++ R+M G P + T+
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVK 385
SS++ G ++ + LL++M G++PN T EI
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM--------------------------- 418
DV+T LID L+ A+ +F+ M
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 419 ------------YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
+ DV ++ ++ C AG G+A++ M+D PN+ T+N LI
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
G ++ D AL+LF +E G +K ++ I + +SG A++ F +M+ IA
Sbjct: 407 GLLRVHRLDDALELFGNMESLG-VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
PN V + L + A ++ K+I LV + N+++ Y+K G +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 201/456 (44%), Gaps = 65/456 (14%)
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMCS-SIR 222
++ + LF DMV+ P K+L A K + G + ++ I H + + SI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 223 VN--------NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKY 274
+N + +A+ K ++G+ + VT N+++ GFC I +A
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSI---------VTLNSLLNGFCHGNRISEAVAL 167
Query: 275 FDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQ 334
D M E G +P VT+ L+ Q + AV L+ +M G PD+ T+ ++I+G +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 335 KGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
+G AL+LL KM +E DV+
Sbjct: 228 RGEPDLALNLLNKMEKGKIEA-----------------------------------DVVI 252
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N++ID K ++ A +F+ M + DV+++N +I C+ G A L M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
+ + P++V +NALI +++ G +A L+ + K +V ++N+LI GF + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
++ M++FR M + N+VT +++ F + + + + +I NIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 571 IDSYAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
+D +GN+ + +F+ + + DI+++ M+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 211/493 (42%), Gaps = 87/493 (17%)
Query: 54 MDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIG 113
+++ LN C +S+AVA++D + E G + +T+ L+ + L R+
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM- 206
Query: 114 LVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
+V P + T +++ K G A + ++M E ++ ++ +I + K
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
++ DLF M G PD F N +
Sbjct: 267 DDAFDLFNKMETKGIKPDVF-----------------------------------TYNPL 291
Query: 228 MAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAM-QEEG 282
++ G A +L M E+ D V +NA+I F + G + +A K +D M + +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
P +V +N LI + + R + +++ R+M GL + T++++I GF Q +A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMY 402
+ ++M+ GV P D++T N L+D
Sbjct: 412 MVFKQMVSDGVHP-----------------------------------DIMTYNILLDGL 436
Query: 403 SKCGDLEAAQRIFDMMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNV 458
G++E A +F+ M +RD + ++ T+I C AG ++LF + PNV
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 459 VTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFR 518
VT+ +++G+ + G +++A LF +++DG + N ++N+LI L+ G + + ++ +
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP-NSGTYNTLIRARLRDGDEAASAELIK 555
Query: 519 RMQFFQIAPNSVT 531
M+ A ++ T
Sbjct: 556 EMRSCGFAGDAST 568
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 205/465 (44%), Gaps = 68/465 (14%)
Query: 107 ELHARIGLVGNV---NPF---VE-TKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWS 155
+L IGL G++ PF VE +KL+S +K + ++M+ NL+T+S
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 156 AMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
I R + + M++ G+ P L +L G C R+ +VA+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN--GFC---HGNRISEAVALVD 169
Query: 216 GMCS------SIRVNNSIMAVYA--KCGE-MGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
M ++ + ++ K E + +++ + D VT+ A+I G C+ G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
+ + A + M++ +E +V +N +I + D A DL KME+ G+ PDV+T++
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM 386
+IS GR A LL ML + P
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINP------------------------------- 318
Query: 387 SLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-----DVYSWNTIIGGYCHAGFCGK 441
D++ N+LID + K G L A++++D M + DV ++NT+I G+C +
Sbjct: 319 ----DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
E+F +M N VT+ LI G+ Q+ D A +FK++ DG + ++ ++N L+
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPDIMTYNILL 433
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
G +G + A+ +F MQ + + VT +++ A AGK
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK--AGK 476
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 203/471 (43%), Gaps = 18/471 (3%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLF 174
N + + ++ + + LS A + +M + ++ T ++++ E V L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
MV G+ PD ++ + + + G + +++ K
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 235 GEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
GE A L M+ E D V +N II G C+ ++ A F+ M+ +G++P + T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
N LI+ GR A L+ M + PD+ ++++I F ++G+ A L +M+
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 351 SG-VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
S P+ + E+ + LV + +T +LI + + D +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 410 AAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
AQ +F M D+ ++N ++ G C+ G A +F MQ D ++VT+ +I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
++G + DLF + G +K NV ++ ++++GF + G K++A +F M+
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 526 APNSVTVLSILPAFA----NLVAGKKVKEIHCCALRRNLVSEISVSNILID 572
PNS T +++ A + + +KE+ C + + V+N+L D
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 162/344 (47%), Gaps = 37/344 (10%)
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
Q+ ++ A F M + P +V ++ L+++ ++ + D+ + L +M++ G++ ++Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 324 TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIG 383
T+S I+ F ++ + AL +L KM+ G P+ +T+
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN---------------------- 149
Query: 384 VKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAY 443
SL++ GN + + + ++ +M Y+ D ++ T++ G +A
Sbjct: 150 ---SLLNGFCHGNRISEAVA------LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
L +M P++VT+ A+I G + G D AL+L ++EK GKI+ +V +N++I G
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYNTIIDG 259
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
+ D A +F +M+ I P+ T ++ N + L +N+ +
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 564 ISVSNILIDSYAKSGNLMYSRRIFDGLP-----LKDIISWNIML 602
+ N LID++ K G L+ + +++D + D++++N ++
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 11/287 (3%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP 120
LC+ G SDA +L + E+ + + L+ + + + +L+ + + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 121 FV--ETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLF 174
V L+ + K + E +VF EM +R N T++ +I + + + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKC 234
MV G PD +L G++ET ++ + M I +++ K
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 235 GEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTW 290
G++ LF S+ + + VT+ +++GFC+ G E+A F M+E+G P T+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 291 NILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
N LI + + G + +L+++M S G D T+ +++ GR
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGR 580
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 146/276 (52%), Gaps = 10/276 (3%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
TY L+++ + +G +H+ R G + +V+ L+ +Y+ CG ++ A KVFD
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLI--YVQNSLLHLYANCGDVASAYKVFD 180
Query: 145 EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET 204
+M E++L W+++I + EE + L+ +M G PD F + +L AC K G L
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 205 GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQ 264
G+ +H I+ G+ ++ +N ++ +YA+CG + AK LF M +++SV+W ++I G
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 265 NGDIEQARKYFDAMQE-EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM-ESFGLTPDV 322
NG ++A + F M+ EG+ P +T+ ++ + + G + R+M E + + P +
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 323 YTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+ M+ + G+ A + ++ M + +PN +
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPM---QPNVV 393
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 179/396 (45%), Gaps = 43/396 (10%)
Query: 136 LSEARKVFDEMRER-NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL-PDEFLLPKIL 193
+S A KVF ++ + N+F W+ +I + + L+ +M G + PD P ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV 253
+A D+ G IHSV IR G S I V NS++ +YA CG++ A K+F M E+D V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 254 TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM 313
WN++I GF +NG E+A + M +G++P T L+++ ++G + + M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 314 ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXX 373
GLT ++++ + ++ + + GR A L +M V+ NS++
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSL---------- 294
Query: 374 XXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGY 433
I G+ V G I+++ +E+ + + ++ I+
Sbjct: 295 -----IVGLAVNG-------FGKEAIELFKY---MESTEGLLPCE-----ITFVGILYAC 334
Query: 434 CHAGFCGKAYELFMKMQDS-DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKR 492
H G + +E F +M++ P + + ++ ++G +A + K + ++
Sbjct: 335 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM----PMQP 390
Query: 493 NVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
NV W +L+ G D A F R+Q Q+ PN
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPN 424
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 41/371 (11%)
Query: 206 RLIHSVAIRHGMCSSIRVNNSIMAVY----AKCGEMGFAKKLFKSMDERDSV-TWNAIIT 260
R IH+ +IRHG+ S + Y M +A K+F +++ +V WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 261 GFCQNGDIEQARKYFDAMQEEG-VEPGLVTWNILIASYN-----QLGRCDIAV------- 307
G+ + G+ A + M+ G VEP T+ LI + +LG +V
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 308 -----------------DLMRKMESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKM 348
D+ + F P D+ W+S+I+GF + G+ AL L +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
G++P+ T+ +H +K+ L ++ + N L+D+Y++CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 409 EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP-PNVVTWNALITG 467
E A+ +FD M +++ SW ++I G GF +A ELF M+ ++ P +T+ ++
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
G + + F+R+ ++ KI+ + + ++ ++GQ KA + + M + P
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQP 390
Query: 528 NSVTVLSILPA 538
N V ++L A
Sbjct: 391 NVVIWRTLLGA 401
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 42/229 (18%)
Query: 411 AQRIFDMMYER-DVYSWNTIIGGYCHAGFCGKAYELFMKMQ-------DSDSPPNVV--- 459
A ++F + + +V+ WNT+I GY G A+ L+ +M+ D+ + P ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 460 --------------------------TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
N+L+ Y G A +F ++ + ++
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-----KD 186
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHC 553
+ +WNS+I GF ++G+ ++A+ ++ M I P+ T++S+L A A + A K +H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 554 CALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
++ L + SN+L+D YA+ G + ++ +FD + K+ +SW ++
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 173/350 (49%), Gaps = 19/350 (5%)
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIITGFCQNGDIEQARKYFDAMQE 280
NSIM+ Y K G + AK F ++ + V + N +I G C G I +A + M +
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
GVEP VT+NIL ++ LG A +++R M GL+PDV T++ ++ G Q G
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 341 ALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS---LVDDVLTGNS 397
L LL+ ML G E NSI E + +M L D++ +
Sbjct: 346 GLVLLKDMLSRGFELNSII--PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
+I K G + A ++D M ++ + + ++ G C G +A L + S
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
++V +N +I GY +SG ++AL+LFK + + G I +VA++NSLI G+ ++ +A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKTQNIAEA 522
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
+I ++ + +AP+ V+ +++ A+AN K + E LRR + +E
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE-----LRREMKAE 567
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 211/506 (41%), Gaps = 66/506 (13%)
Query: 135 HLSEARKVFD---EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
H E K++D E++++N T+S ++ R++ E+ V P
Sbjct: 168 HFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD--- 248
I+ K G ++ + ++ G+ S+ +N ++ G + A +L M+
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 249 -ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV 307
E DSVT+N + GF G I A + M ++G+ P ++T+ IL+ QLG D+ +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 308 DLMRKMESFGLTPD-VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN----SITVXX 362
L++ M S G + + S M+SG + GR AL L +M G+ P+ SI +
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 363 XXXXXXXXXXXXXXXEI-----------HG---IGV--------KMSLVD---------D 391
E+ HG +G+ SL+D D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFM 447
++ N +ID Y+K G +E A +F ++ E V ++N++I GYC +A ++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
++ P+VV++ L+ Y G +L + ++ +G NV +++ + G +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRG 586
Query: 508 GQK------------DKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKEIH 552
+ +K Q R M+ I P+ + T++ L +L EI
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI- 645
Query: 553 CCALRRNLVSEISVSNILIDSYAKSG 578
RNL + + NILIDS G
Sbjct: 646 --MKSRNLDASSATYNILIDSLCVYG 669
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 188/458 (41%), Gaps = 28/458 (6%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N LC G +++A+ + + + G + +TY N+L + G R L
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTY-NILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 118 VNPFVETKLVSMYSKC--GHLSEARKVFDEMRER-----NLFTWSAMIGACSREKSWEEV 170
++P V T + + +C G++ + +M R ++ S M+ + +E
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ LF M G PD ++ K G + ++ + + R + +++
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 231 YAKCGEMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
+ G + A+ L S+ + D V +N +I G+ ++G IE+A + F + E G+ P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+ T+N LI Y + A ++ ++ +GL P V ++++++ + G T +L R
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV----KMSLVD--------DVLT 394
+M G+ P ++T + + K L D D +T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N++I + L A ++M R++ ++N +I C G+ KA +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+ + + + LI + G + A+ LF ++ G
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 131/315 (41%), Gaps = 29/315 (9%)
Query: 46 RSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG 105
R LP + A L LC G L +A ++LDSL G + + Y ++ CIE
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 106 RELHARIGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIG 159
EL ++ + + P V T L+ Y K +++EARK+ D ++ L +++ ++
Sbjct: 488 LELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 160 A---CSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK------CGDLETGRLIHS 210
A C KS +E L +M G P I + + C + R+
Sbjct: 547 AYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 211 V--AIR----HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD----SVTWNAIIT 260
+R G+ N+I+ + + A + M R+ S T+N +I
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP 320
C G I +A + ++QE+ V + LI ++ G ++AV L ++ G
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 321 DVYTWSSMISGFTQK 335
+ +S++I+ ++
Sbjct: 724 SIRDYSAVINRLCRR 738
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 149/366 (40%), Gaps = 42/366 (11%)
Query: 278 MQEEGV-----EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP------------ 320
+QEEG GLV W++L+ ++L D ++ +++KM+ L
Sbjct: 111 LQEEGTFRKWESTGLV-WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 321 -------DVY---------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
DVY T+S+++ G ++ + A+ LR + P+ ++
Sbjct: 170 RETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMM---YE 420
+K LV V + N LI+ G + EA + DM E
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
D ++N + G+ G A+E+ M D P+V+T+ L+ G Q G D L L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
K + G ++ + +++G ++G+ D+A+ +F +M+ ++P+ V ++
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL----PLKDII 596
L ++ + ++ L+ + G L+ +R + D L DI+
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 597 SWNIML 602
+NI++
Sbjct: 470 LYNIVI 475
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIITGFCQNGDIEQARKYFDAMQE 280
NSIM+ Y K G + AK F ++ + V + N +I G C G I +A + M +
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 281 EGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYH 340
GVEP VT+NIL ++ LG A +++R M GL+PDV T++ ++ G Q G
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 341 ALDLLRKMLLSGVE-----PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTG 395
L LL+ ML G E P S+ + ++ G L D++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG----LSPDLVAY 401
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQD 451
+ +I K G + A ++D M ++ + + ++ G C G +A L +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
S ++V +N +I GY +SG ++AL+LFK + + G I +VA++NSLI G+ ++
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKTQNIA 520
Query: 512 KAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSE 563
+A +I ++ + +AP+ V+ +++ A+AN K + E LRR + +E
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE-----LRREMKAE 567
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 211/506 (41%), Gaps = 66/506 (13%)
Query: 135 HLSEARKVFD---EMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPK 191
H E K++D E++++N T+S ++ R++ E+ V P
Sbjct: 168 HFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD--- 248
I+ K G ++ + ++ G+ S+ +N ++ G + A +L M+
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 249 -ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV 307
E DSVT+N + GF G I A + M ++G+ P ++T+ IL+ QLG D+ +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 308 DLMRKMESFGLTPD-VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN----SITVXX 362
L++ M S G + + S M+SG + GR AL L +M G+ P+ SI +
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 363 XXXXXXXXXXXXXXXEI-----------HG---IGV--------KMSLVD---------D 391
E+ HG +G+ SL+D D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFM 447
++ N +ID Y+K G +E A +F ++ E V ++N++I GYC +A ++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
++ P+VV++ L+ Y G +L + ++ +G NV +++ + G +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRG 586
Query: 508 GQK------------DKAMQIFRRMQFFQIAPNSV---TVLSILPAFANLVAGKKVKEIH 552
+ +K Q R M+ I P+ + T++ L +L EI
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI- 645
Query: 553 CCALRRNLVSEISVSNILIDSYAKSG 578
RNL + + NILIDS G
Sbjct: 646 --MKSRNLDASSATYNILIDSLCVYG 669
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 163/351 (46%), Gaps = 43/351 (12%)
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
++K + +++ T++ ++ G C+ +E A + + + + P +V++N +++ Y +LG
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 303 CDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXX 362
D+A + GL P VY+ + +I+G G AL+L M GVEP+S+T
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT--- 294
Query: 363 XXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD 422
+ I K G L+ M S G E + + D D
Sbjct: 295 -----------------YNILAK---------GFHLLGMIS--GAWEVIRDMLDKGLSPD 326
Query: 423 VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPN-VVTWNALITGYMQSGAEDQALDLF 481
V ++ ++ G C G L M N ++ + +++G ++G D+AL LF
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 482 KRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
+++ DG + ++ +++ +I G + G+ D A+ ++ M +I PNS T ++L
Sbjct: 387 NQMKADG-LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC- 444
Query: 542 LVAGKKVKEIHCCALRRNLVS-----EISVSNILIDSYAKSGNLMYSRRIF 587
+K + +L +L+S +I + NI+ID YAKSG + + +F
Sbjct: 445 ----QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 188/458 (41%), Gaps = 28/458 (6%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N LC G +++A+ + + + G + +TY N+L + G R L
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTY-NILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 118 VNPFVETKLVSMYSKC--GHLSEARKVFDEMRER-----NLFTWSAMIGACSREKSWEEV 170
++P V T + + +C G++ + +M R ++ S M+ + +E
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
+ LF M G PD ++ K G + ++ + + R + +++
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 231 YAKCGEMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPG 286
+ G + A+ L S+ + D V +N +I G+ ++G IE+A + F + E G+ P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 287 LVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLR 346
+ T+N LI Y + A ++ ++ +GL P V ++++++ + G T +L R
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 347 KMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV----KMSLVD--------DVLT 394
+M G+ P ++T + + K L D D +T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N++I + L A ++M R++ ++N +I C G+ KA +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+ + + + LI + G + A+ LF ++ G
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 23/312 (7%)
Query: 46 RSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG 105
R LP + A L LC G L +A ++LDSL G + + Y ++ CIE
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 106 RELHARIGLVGNVNPFVET--KLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIG 159
EL ++ + + P V T L+ Y K +++EARK+ D ++ L +++ ++
Sbjct: 488 LELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 160 ACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGK------CGDLETGRLIHSV-- 211
A + + + + +L +M G P I + + C + R+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 212 AIR----HGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD----SVTWNAIITGFC 263
+R G+ N+I+ + + A + M R+ S T+N +I C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 264 QNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVY 323
G I +A + ++QE+ V + LI ++ G ++AV L ++ G +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 324 TWSSMISGFTQK 335
+S++I+ ++
Sbjct: 727 DYSAVINRLCRR 738
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 149/366 (40%), Gaps = 42/366 (11%)
Query: 278 MQEEGV-----EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP------------ 320
+QEEG GLV W++L+ ++L D ++ +++KM+ L
Sbjct: 111 LQEEGTFRKWESTGLV-WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 321 -------DVY---------TWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
DVY T+S+++ G ++ + A+ LR + P+ ++
Sbjct: 170 RETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMM---YE 420
+K LV V + N LI+ G + EA + DM E
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 421 RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDL 480
D ++N + G+ G A+E+ M D P+V+T+ L+ G Q G D L L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 481 FKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFA 540
K + G ++ + +++G ++G+ D+A+ +F +M+ ++P+ V ++
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 541 NLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL----PLKDII 596
L ++ + ++ L+ + G L+ +R + D L DI+
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 597 SWNIML 602
+NI++
Sbjct: 470 LYNIVI 475
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 139/642 (21%), Positives = 257/642 (40%), Gaps = 86/642 (13%)
Query: 1 MEKCLIILPTKSRPPLSIPSYSASQF--EFIASTRVHANSNYVSMSIRSLPYPKFMDAQ- 57
++K L I ++ + IP S + I S RV +++ R P + A
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 58 --LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLV 115
L+ L G ++ A+ + E+G +V ++ +L+ + D IEV
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVA---------- 270
Query: 116 GNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFY 175
++L+S+ CG N+ T+ +I + + DLF
Sbjct: 271 --------SRLLSLVLDCGPAP------------NVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG 235
M + G PD ++ K G L G + S A+ G+ + V +S + VY K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 236 EMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
++ A ++K M + VT+ +I G CQ+G I +A + + + G+EP +VT++
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA---------- 341
LI + + G L M G PDV + ++ G +++G HA
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 342 -------------------------LDLLRKMLLSGVEPNSIT------VXXXXXXXXXX 370
L + R M + G++P+ T V
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSW 426
++ + + + D+ N +I + KC +E A + F+ + E D+ ++
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
NT+I GYC +A +F ++ + PN VT LI ++ D A+ +F + +
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 487 DGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGK 546
G K N ++ L+ F +S + + ++F MQ I+P+ V+ I+
Sbjct: 671 KGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 547 KVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
+ I A+ L+ ++ ILI Y K G L+ + +++
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/531 (19%), Positives = 221/531 (41%), Gaps = 61/531 (11%)
Query: 29 IASTRVHANSNYVSMSIRSLPYPKFMD--AQLNQLCSNGPLSDAVAILDSLAEQGSKVRP 86
++ ++ S +S+ + P P + +N C G + A + + ++G +
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 87 ITYMNLLQSCIDRDCIEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDE 145
I Y L+ + +G +L ++ G ++ V + + +Y K G L+ A V+
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 146 MR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
M N+ T++ +I ++ E ++ +++ G P ++ KCG+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCG----EMGFAKKLFKSMDERDSVTWNA 257
L +G ++ I+ G + + ++ +K G M F+ K+ + V +N+
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN-------------------ILIASYN 298
+I G+C+ ++A K F M G++P + T+ I + ++
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 299 QLGR---------CDIAVDLMRKMESF-------------GLTPDVYTWSSMISGFTQKG 336
+ R C++ + L+ K + PD+ T+++MI G+
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
R A + + ++ PN++T+ + I + + +T
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDS 452
L+D +SK D+E + ++F+ M E+ + S++ II G C G +A +F + D+
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 453 DSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGK-----IKRNVASWN 498
P+VV + LI GY + G +A L++ + ++G ++R ++ +N
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 792
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 173/405 (42%), Gaps = 44/405 (10%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQA 195
L ARK+FD + F ++ +I A E + L+ + G P I A
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 196 CGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTW 255
RL+HS R G S +++ YAK G + A+++F M +RD W
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
NA+ITG+ + GD++ A + FD+M + V +W +I
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNV----TSWTTVI--------------------- 186
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL-SGVEPNSITVXXXXXXXXXXXXXX 374
SGF+Q G AL + M V+PN ITV
Sbjct: 187 --------------SGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 375 XXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM-YERDVYSWNTIIGGY 433
+ G + D++ N+ I+MYSKCG ++ A+R+F+ + +R++ SWN++IG
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRN 493
G +A LF +M P+ VT+ L+ + G + +LFK +E+ KI
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 494 VASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
+ + +I + G+ +A + + M + P++V ++L A
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGA 394
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 35/278 (12%)
Query: 106 RELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
R LH++ G + F T L++ Y+K G L AR+VFDEM +R++ W+AMI R
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 165 KSWEEVVDLFYDMVRHG-----------------------FL---------PDEFLLPKI 192
+ ++LF M R FL P+ + +
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM-DERD 251
L AC G+LE GR + A +G +I V N+ + +Y+KCG + AK+LF+ + ++R+
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
+WN++I +G ++A F M EG +P VT+ L+ + G +L +
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 312 KMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
ME ++P + + MI + G+ A DL++ M
Sbjct: 342 SMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM 379
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 413 RIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
+ F +E D + T+I Y G A +F +M D P WNA+ITGY + G
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP----VWNAMITGYQRRG 162
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAPNSVT 531
A++LF D ++NV SW ++I+GF Q+G +A+++F M+ + + PN +T
Sbjct: 163 DMKAAMELF-----DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHIT 217
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL- 590
V+S+LPA ANL + + + A I V N I+ Y+K G + ++R+F+ L
Sbjct: 218 VVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG 277
Query: 591 PLKDIISWNIML 602
+++ SWN M+
Sbjct: 278 NQRNLCSWNSMI 289
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 54/256 (21%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
DV N++I Y + GD++AA +FD M ++V SW T+I G+ G +A ++F+ M+
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 451 -DSDSPPNVVT-----------------------------------WNALITGYMQSGAE 474
D PN +T NA I Y + G
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 475 DQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLS 534
D A LF+ + +RN+ SWNS+I G+ D+A+ +F +M P++VT +
Sbjct: 267 DVAKRLFEELGN----QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVG 322
Query: 535 ILPAFAN---LVAG----KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
+L A + +V G K ++E+H + ++ +ID + G L + +
Sbjct: 323 LLLACVHGGMVVKGQELFKSMEEVH------KISPKLEHYGCMIDLLGRVGKLQEAYDLI 376
Query: 588 DGLPLK-DIISWNIML 602
+P+K D + W +L
Sbjct: 377 KTMPMKPDAVVWGTLL 392
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 51/362 (14%)
Query: 225 NSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVE 284
NS+++ +CG+M A KLF M ER V+W A++ G ++G ++QA + F M +
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT- 159
Query: 285 PGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDL 344
WN ++ Y Q G+ D A+ L ++M +V +W++MI G Q R+ ALDL
Sbjct: 160 ---AAWNSMVHGYLQFGKVDDALKLFKQMPG----KNVISWTTMICGLDQNERSGEALDL 212
Query: 345 LRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+ ML ++ S ++HG+ +K+ + + SLI Y+
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 405 CGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW--- 461
C + ++++FD V W ++ GY A +F M + PN T+
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 462 --------------------------------NALITGYMQSGAEDQALDLFKRIEKDGK 489
N+L+ Y SG + A+ +F +I
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI----- 387
Query: 490 IKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN---LVAGK 546
K+++ SWNS+I G Q G+ A IF +M P+ +T +L A ++ L G+
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 547 KV 548
K+
Sbjct: 448 KL 449
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 213/502 (42%), Gaps = 74/502 (14%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
TK+++ Y++ L +A +FDEM R++ +W++MI C V LF +M +
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV 129
Query: 184 PDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKK 242
++ C + G ++ RL + + ++ NS++ Y + G++ A K
Sbjct: 130 S----WTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALK 180
Query: 243 LFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM------------------------ 278
LFK M ++ ++W +I G QN +A F M
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 279 -----------------QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
EE V L+T A+ ++G RK+ +
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLIT---FYANCKRIGDS-------RKVFDEKVHEQ 290
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHG 381
V W++++SG++ + AL + ML + + PN T E+HG
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ VK+ L D GNSL+ MYS G++ A +F ++++ + SWN+II G G
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKD-GKIKRNVASWNSL 500
A+ +F +M + P+ +T+ L++ G ++ LF + I R + + +
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCM 470
Query: 501 IAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA---FANLVAGKKVKEIHCCALR 557
+ + G+ +A ++ RM + PN + L++L A +++ G+K A
Sbjct: 471 VDILGRCGKLKEAEELIERM---VVKPNEMVWLALLSACRMHSDVDRGEKA-----AAAI 522
Query: 558 RNLVSEISVSNILIDS-YAKSG 578
NL S+ S + +L+ + YA +G
Sbjct: 523 FNLDSKSSAAYVLLSNIYASAG 544
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 52/312 (16%)
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
+LI ++ R D A ++ ++ S P V ++ MI+G+T+ R AL+L +M
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEM--- 92
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
P V DV++ NS+I +CGD+ A
Sbjct: 93 ---P---------------------------------VRDVVSWNSMISGCVECGDMNTA 116
Query: 412 QRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
++FD M ER V SW ++ G +G +A LF +M D+ WN+++ GY+Q
Sbjct: 117 VKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA----AWNSMVHGYLQF 172
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT 531
G D AL LFK++ +NV SW ++I G Q+ + +A+ +F+ M I S
Sbjct: 173 GKVDDALKLFKQMP-----GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 532 VLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP 591
++ A AN A ++H ++ + E VS LI YA + SR++FD
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 592 LKDIISWNIMLS 603
+ + W +LS
Sbjct: 288 HEQVAVWTALLS 299
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 140/281 (49%), Gaps = 8/281 (2%)
Query: 82 SKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-NPFVETKLVSMYSKCGHLSEAR 140
S RP T ++ +C + +G ++H I +G + +V L++ Y+ C + ++R
Sbjct: 223 STSRPFTC--VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 141 KVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
KVFDE + W+A++ S K E+ + +F M+R+ LP++ L +C G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIIT 260
L+ G+ +H VA++ G+ + V NS++ +Y+ G + A +F + ++ V+WN+II
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 261 GFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF--GL 318
G Q+G + A F M EP +T+ L+++ + G + L M S +
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
+ ++ M+ + G+ A +L+ +M+ V+PN +
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMV 498
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 170/414 (41%), Gaps = 30/414 (7%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVET 124
G ++ AV + D + E+ +++ ++ C ++ L ++ P +T
Sbjct: 111 GDMNTAVKLFDEMPERS----VVSWTAMVNGCFRSGKVDQAERLFYQM-------PVKDT 159
Query: 125 ----KLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V Y + G + +A K+F +M +N+ +W+ MI + + E +DLF +M+R
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
++ AC G +H + I+ G V+ S++ YA C +G +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
+K+F W A+++G+ N E A F M + P T+ + S + L
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 301 GRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML-LSGVEPNSIT 359
G D ++ GL D + +S++ ++ G A+ + K+ S V NSI
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM- 418
V I G ++++ D +T L+ S CG LE +++F M
Sbjct: 400 VGCAQHGRGKWAFV-----IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMS 454
Query: 419 -----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
+R + + ++ G CGK E ++ PN + W AL++
Sbjct: 455 SGINHIDRKIQHYTCMVDIL---GRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 159/393 (40%), Gaps = 77/393 (19%)
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A+++F + + +ITG+ ++ + A FD M V V+WN +I+ +
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISGCVE 109
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G + AV L +M V +W++M++G + G+ A L +M P
Sbjct: 110 CGDMNTAVKLFDEMPE----RSVVSWTAMVNGCFRSGKVDQAERLFYQM------P---- 155
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
V D NS++ Y + G ++ A ++F M
Sbjct: 156 -----------------------------VKDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 420 ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ----DSDSPPNVVTWNA------------ 463
++V SW T+I G G+A +LF M S S P A
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 464 -----LITGYMQSGAEDQALDLF----KRIEK-----DGKIKRNVASWNSLIAGFLQSGQ 509
+ G++ +L F KRI D K+ VA W +L++G+ + +
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNI 569
+ A+ IF M I PN T S L + + L KE+H A++ L ++ V N
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 570 LIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
L+ Y+ SGN+ + +F + K I+SWN ++
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RI 112
A L+ N DA++I + T+ + L SC ++ G+E+H ++
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVD 172
GL + FV LV MYS G++++A VF ++ ++++ +W+++I C++ +
Sbjct: 356 GL--ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH---SVAIRHGMCSSIRVNNSIMA 229
+F M+R PDE +L AC CG LE GR + S I H + I+ ++
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTCMVD 472
Query: 230 VYAKCGEMGFAKKLFKSMDER-DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
+ +CG++ A++L + M + + + W A+++ + D+++ K A+ +
Sbjct: 473 ILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSS-A 531
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK---------GRTY 339
+ +L Y GR L KM+ G+ + +I G + R Y
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIY 591
Query: 340 HALDLLRKML 349
L+ LR+ L
Sbjct: 592 EKLEFLREKL 601
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 131/240 (54%), Gaps = 5/240 (2%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
+V+ L+ +Y+ CG ++ A KVFD+M E++L W+++I + EE + L+ +M
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 181 GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA 240
G PD F + +L AC K G L G+ +H I+ G+ ++ +N ++ +YA+CG + A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 241 KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQE-EGVEPGLVTWNILIASYNQ 299
K LF M +++SV+W ++I G NG ++A + F M+ EG+ P +T+ ++ + +
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 300 LGRCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
G + R+M E + + P + + M+ + G+ A + ++ M + +PN +
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM---QPNVV 260
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 142/340 (41%), Gaps = 74/340 (21%)
Query: 200 GDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
D+ G IHSV IR G S I V NS++ +YA CG
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------------ 37
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
D+ A K FD M E+
Sbjct: 38 -------DVASAYKVFDKMPEK-------------------------------------- 52
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
D+ W+S+I+GF + G+ AL L +M G++P+ T+ +
Sbjct: 53 -DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 111
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H +K+ L ++ + N L+D+Y++CG +E A+ +FD M +++ SW ++I G GF
Sbjct: 112 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 171
Query: 440 GKAYELFMKMQDSDSP-PNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+A ELF M+ ++ P +T+ ++ G + + F+R+ ++ KI+ + +
Sbjct: 172 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 231
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPA 538
++ ++GQ KA + + M + PN V ++L A
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGA 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
N+L+ Y G A +F ++ + +++ +WNS+I GF ++G+ ++A+ ++ M
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPE-----KDLVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 522 FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLM 581
I P+ T++S+L A A + A K +H ++ L + SN+L+D YA+ G +
Sbjct: 82 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 141
Query: 582 YSRRIFDGLPLKDIISWNIML 602
++ +FD + K+ +SW ++
Sbjct: 142 EAKTLFDEMVDKNSVSWTSLI 162
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/555 (21%), Positives = 231/555 (41%), Gaps = 19/555 (3%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVG----RELHARIG 113
L+ C G A+ +LD + +G TY L+ + I G R++ R+
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 114 LVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEE 169
+ N L++ +S G + A ++ +EM L T++A+I E +++E
Sbjct: 335 ---HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 170 VVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA 229
+ +FY M G P E +L K + + R + R+G+C ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 230 VYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEP 285
K G + A L M + D VT++A+I GFC+ G + A++ + G+ P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 286 GLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLL 345
+ ++ LI + ++G A+ + M G T D +T++ +++ + G+ A + +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 346 RKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKC 405
R M G+ PN+++ + K+ T SL+ K
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 406 GDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW 461
G L A++ ++ D +NT++ C +G KA LF +M P+ T+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 462 NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
+LI+G + G A+ K E G + N + + G ++GQ + +M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 522 FFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLM 581
P+ VT +++ ++ + +K ++ +N ++ NIL+ Y+K ++
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 582 YSRRIFDGLPLKDII 596
S ++ + L I+
Sbjct: 812 TSFLLYRSIILNGIL 826
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 209/487 (42%), Gaps = 64/487 (13%)
Query: 105 GRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSRE 164
R + + L+ + FV L++ Y C N + +I RE
Sbjct: 131 ARHILKELSLMSGKSSFVFGALMTTYRLC--------------NSNPSVYDILIRVYLRE 176
Query: 165 KSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG-DLETGRLIHSVAIRHGMCSSIRV 223
++ +++F M +GF P + IL + K G D+ + + ++ +C +
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM-LKRKICPDVAT 235
Query: 224 NNSIMAVYAKCGEMGFAK------KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDA 277
N ++ V C E F K K+ KS VT+N ++ +C+ G + A + D
Sbjct: 236 FNILINVL--CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 278 MQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGR 337
M+ +GV+ + T+N+LI + R L+R M + P+ T++++I+GF+ +G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 338 TYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNS 397
A LL +ML G+ PN +T N+
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTF-----------------------------------NA 378
Query: 398 LIDMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSD 453
LID + G+ + A ++F MM + + S+ ++ G C A +M+M+ +
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 454 SPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKA 513
+T+ +I G ++G D+A+ L + KDG I ++ ++++LI GF + G+ A
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG-IDPDIVTYSALINGFCKVGRFKTA 497
Query: 514 MQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
+I R+ ++PN + +++ + K+ I+ + + N+L+ S
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 574 YAKSGNL 580
K+G +
Sbjct: 558 LCKAGKV 564
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 183/449 (40%), Gaps = 27/449 (6%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRD----CIEVGRELHARIG 113
L +C +G L+ AV++ + ++ TY +L+ + I +E AR
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR-- 717
Query: 114 LVGNV--NPFVETKLVSMYSKCGHLSEA---RKVFDEM-RERNLFTWSAMIGACSREKSW 167
GNV N + T V K G R+ D + ++ T +AMI SR
Sbjct: 718 --GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
E+ DL +M P+ +L K D+ T L++ I +G+ +S+
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 228 MAVYAKCGEMGFAKKLFKSM----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV 283
+ + + K+ K+ E D T+N +I+ C NG+I A M G+
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
T + +++ N+ R + ++ +M G++P+ + +I+G + G A
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ +M+ + P ++ + +KM LV + + +L+ +
Sbjct: 956 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015
Query: 404 KCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K G++ A + +M + D+ S+N +I G C G A+EL+ +M+ N
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075
Query: 460 TWNALITGYMQ-----SGAEDQALDLFKR 483
T+ ALI G + SGA+ DL R
Sbjct: 1076 TYKALIRGLLARETAFSGADIILKDLLAR 1104
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 197/480 (41%), Gaps = 44/480 (9%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGR 106
LP D +N ++G A ++ D + + G TY +LL+ C E +
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 107 ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMI-GAC 161
L + + V+ + L++ K G+L++A +F EM +R++ +T++++I G C
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 162 SREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSI 221
+ K+ ++ R LP+ K++ C G + G+ + R M
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPN-----KVMYTCFVDGMFKAGQWKAGIYFREQM---- 750
Query: 222 RVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+G D VT NA+I G+ + G IE+ M +
Sbjct: 751 -------------DNLGHTP---------DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
P L T+NIL+ Y++ + L R + G+ PD T S++ G +
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 342 LDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDM 401
L +L+ + GVE + T ++ + + + D T ++++ +
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 402 YSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKM-QDSDSPP 456
++ + ++ + M ++ + + +I G C G A+ + +M PP
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
NV +A++ + G D+A L + + K K+ +AS+ +L+ ++G +A+++
Sbjct: 969 NVAE-SAMVRALAKCGKADEATLLLRFMLK-MKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 166/393 (42%), Gaps = 45/393 (11%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACSREKSWE--EVVDLFYDMVRHGF-LPDEFLLPKI 192
LS AR +FD N ++A++ A S F MV P+ F+ P +
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 193 LQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA-KCGEMGFAKKLFKSMDERD 251
L++ + L+H+ + G + V +++ YA + A++LF M ER+
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
V+W A+++G+ ++GDI A F+ M E V +WN ++A+ Q G AV L R
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVSLFR 248
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
+M + P + PN +TV
Sbjct: 249 RMIN---EPS-------------------------------IRPNEVTVVCVLSACAQTG 274
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIG 431
IH + L DV NSL+D+Y KCG+LE A +F M ++ + +WN++I
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 432 GYCHAGFCGKAYELF---MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+ G +A +F MK+ +D P+ +T+ L+ G + F +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
I+ + + LI ++G+ D+A+++ M+
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 28/349 (8%)
Query: 17 SIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFMDAQLNQLCSNGPLSDAVA---I 73
S+P +++S F F R+ N RS+P P L L S LS A + +
Sbjct: 101 SLPLHASSAFSFF---RLMVN--------RSVPRPNHFIYPL-VLKSTPYLSSAFSTPLV 148
Query: 74 LDSLAEQGSKVRPITYMNLLQSCIDR-DCIEVGRELHARIGLVGNVNPFVETKLVSMYSK 132
L + G + + LL S I + R+L + N T ++S Y++
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS---ERNVVSWTAMLSGYAR 205
Query: 133 CGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH-GFLPDEFLLPK 191
G +S A +F++M ER++ +W+A++ AC++ + E V LF M+ P+E +
Sbjct: 206 SGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD 251
+L AC + G L+ + IH+ A R + S + V+NS++ +Y KCG + A +FK ++
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQE---EGVEPGLVTWNILIASYNQLGRCDIA-- 306
WN++I F +G E+A F+ M + ++P +T+ L+ + G
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 307 -VDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
DLM FG+ P + + +I + GR AL+++ M + E
Sbjct: 386 YFDLMTN--RFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 6/157 (3%)
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQS 507
++ D S NVV+W A+++GY +SG A+ LF+ + + R+V SWN+++A Q+
Sbjct: 183 QLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE-----RDVPSWNAILAACTQN 237
Query: 508 GQKDKAMQIFRRM-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISV 566
G +A+ +FRRM I PN VTV+ +L A A + K IH A RR+L S++ V
Sbjct: 238 GLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFV 297
Query: 567 SNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
SN L+D Y K GNL + +F K + +WN M++
Sbjct: 298 SNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHA-- 110
+A L NG +AV++ + + S +RP +T + +L +C +++ + +HA
Sbjct: 228 NAILAACTQNGLFLEAVSLFRRMINEPS-IRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 111 -RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEE 169
R L +V FV LV +Y KCG+L EA VF +++L W++MI + EE
Sbjct: 287 YRRDLSSDV--FVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEE 344
Query: 170 VVDLFYDMVR---HGFLPDEFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNN 225
+ +F +M++ + PD +L AC G + GR + R G+ I
Sbjct: 345 AIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG 404
Query: 226 SIMAVYAKCGEMGFAKKLFKSMDER-DSVTWNAIITGFCQNGDIEQA 271
++ + + G A ++ +M + D W +++ +G ++ A
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 183/359 (50%), Gaps = 27/359 (7%)
Query: 16 LSIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPK--FMDAQLNQLCSNGPLSD---A 70
LS +Y S+ ++ST +Y +R +P P + ++ + SN + A
Sbjct: 37 LSHHTYPLSKLLHLSST---VCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLA 93
Query: 71 VAILDS-LAEQGSKVRP--ITYMNLLQ-SCIDRDCIEVGRELHARI-GLVGNVNP--FVE 123
++ D L+ + + VRP TY +L + S D GR LHA + + VN FV+
Sbjct: 94 FSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQ 153
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREK---SWEEVVDLFYDM-VR 179
LV Y+ CG L EAR +F+ +RE +L TW+ ++ A + + S EEV+ LF M VR
Sbjct: 154 AALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR 213
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
P+E L ++++C G+ G H +++ + + V S++ +Y+KCG + F
Sbjct: 214 ----PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSF 269
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A+K+F M +RD +NA+I G +G ++ + + ++ +G+ P T+ + I++ +
Sbjct: 270 ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 300 LGRCDIAVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
G D + + M++ +G+ P V + ++ + GR A + ++KM V+PN+
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM---PVKPNA 385
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 199/511 (38%), Gaps = 101/511 (19%)
Query: 90 MNLLQSCIDRDCIEVGRELHARI---GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEM 146
+NL+ C ++ +++HA+I GL + P +KL+ + S LS A + ++
Sbjct: 13 LNLISKC---KSLQNLKQIHAQIITIGLSHHTYPL--SKLLHLSSTVC-LSYALSILRQI 66
Query: 147 RERNLFTWSAMIGA--CSREKSWEEVVDLFYDMV---RHGFL-PDEFLLPKILQACGKCG 200
++F ++ +I + + + + YD + R F+ P+EF P + +A G
Sbjct: 67 PNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDA 126
Query: 201 DLET-GRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAII 259
GR +H+ ++ F D A++
Sbjct: 127 QWHRHGRALHAHVLK-----------------------------FLEPVNHDRFVQAALV 157
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
+ G + +AR F+ ++E
Sbjct: 158 GFYANCGKLREARSLFERIRE--------------------------------------- 178
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
PD+ TW+++++ + ++L + V PN +++
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWA 238
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFC 439
H +K +L + G SLID+YSKCG L A+++FD M +RDV +N +I G GF
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 440 GKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNS 499
+ EL+ + P+ T+ I+ SG D+ L +F ++ I+ V +
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC 358
Query: 500 LIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRN 559
L+ +SG+ ++A + ++M + PN+ S L + + H R
Sbjct: 359 LVDLLGRSGRLEEAEECIKKM---PVKPNATLWRSFLGS----------SQTHGDFER-- 403
Query: 560 LVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
EI++ ++L + SGN + I+ G+
Sbjct: 404 --GEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
AL+ Y G +A LF+RI + ++A+WN+L+A + S + D ++
Sbjct: 155 ALVGFYANCGKLREARSLFERIREP-----DLATWNTLLAAYANSEEIDSDEEVLLLFMR 209
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEI--HCCALRRNLVSEISVSNILIDSYAKSGNL 580
Q+ PN +++++++ + ANL G+ V+ + H L+ NL V LID Y+K G L
Sbjct: 210 MQVRPNELSLVALIKSCANL--GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 581 MYSRRIFDGLPLKDIISWNIML 602
++R++FD + +D+ +N M+
Sbjct: 268 SFARKVFDEMSQRDVSCYNAMI 289
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 217/490 (44%), Gaps = 27/490 (5%)
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFY 175
P+V L ++ + L+EA++++ M + + T ++ A RE+ E +++
Sbjct: 199 PYVNRTLSALVQR-NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 176 DMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMC-SSIRVNNSIMAVYAKC 234
+ G PD L +QAC K DL + +C S S++ K
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 235 GEMGFAKKLFKSMDERDSVTWN-----AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G M A +L M D ++ N ++ITG C+N D+ A FD M++EG P VT
Sbjct: 318 GNMDDAIRLKDEM-LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+++LI + + G + A++ +KME GLTP V+ ++I G+ + + AL L +
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436
Query: 350 LSGVEP----NSI-TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSK 404
+G+ N+I + E GIG + ++V+ G + +
Sbjct: 437 ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG------HCR 490
Query: 405 CGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVT 460
+++ A+ +F + E+ + Y+++ +I G A E+ M S+ N V
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 461 WNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ +I G + G +A +L + ++ ++ + S+NS+I GF + G+ D A+ + M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 521 QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
I+PN +T S++ + E+ + + +I LID + K N+
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 581 MYSRRIFDGL 590
+ +F L
Sbjct: 671 ESASALFSEL 680
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 240/511 (46%), Gaps = 29/511 (5%)
Query: 118 VNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDL 173
+N T L++ + K L A +FD+M + N T+S +I + E+ ++
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
+ M G P F + I+Q K E + + G+ +++ V N+I++ K
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCK 455
Query: 234 CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G+ A +L M+ R + V++N ++ G C+ +++ AR F + E+G++P T
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
++ILI + A++++ M S + + + ++I+G + G+T A +LL M+
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 350 ------LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+S + NSI + E+ G G+ +V+T SL++
Sbjct: 576 EEKRLCVSCMSYNSI-IDGFFKEGEMDSAVAAYEEMCGNGIS----PNVITYTSLMNGLC 630
Query: 404 KCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVV 459
K ++ A + D M + D+ ++ +I G+C A LF ++ + P+
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRR 519
+N+LI+G+ G ALDL+K++ KDG ++ ++ ++ +LI G L+ G A +++
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 520 MQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGN 579
MQ + P+ + I+ + KV ++ + N+ + + N +I + + GN
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 580 LMYSRRIFDGLPLKDII----SWNIMLSQEI 606
L + R+ D + K I+ +++I++S ++
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 222/508 (43%), Gaps = 59/508 (11%)
Query: 62 CSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHAR---IGLVGNV 118
C N L A+ + D + ++G +T+ L++ +E E + + +GL +V
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 119 --------------------------------NPFVETKLVSMYSKCGHLSEARKVFDEM 146
N FV ++S K G EA ++ +M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 147 RER----NLFTW-SAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD 201
R N+ ++ + M+G C R+K+ + +F +++ G P+ + ++ C + D
Sbjct: 470 ESRGIGPNVVSYNNVMLGHC-RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 202 LETGRLIHSVAIRHGMCSSIRVN----NSIMAVYAKCGEMGFAKKLFKSMDERDSV---- 253
+ + + H S+I VN +I+ K G+ A++L +M E +
Sbjct: 529 EQNALEV----VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 254 -TWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
++N+II GF + G+++ A ++ M G+ P ++T+ L+ + R D A+++ +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M++ G+ D+ + ++I GF ++ A L ++L G+ P+
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE----RDVYSWNT 428
+++ +K L D+ T +LID K G+L A ++ M D +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
I+ G G K ++F +M+ ++ PNV+ +NA+I G+ + G D+A L + G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQI 516
I + A+++ L++G + + Q +A +
Sbjct: 825 -ILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 28/293 (9%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI--------EVGRELH 109
+N LC G S A +L ++ E+ L SC+ + I E+ +
Sbjct: 555 INGLCKVGQTSKARELLANMIEEK---------RLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 110 ARIGLVGN-VNPFV--ETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACS 162
A + GN ++P V T L++ K + +A ++ DEM+ + ++ + A+I
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ + E LF +++ G P + + ++ G++ ++ ++ G+ +
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+++ K G + A +L+ M D + + I+ G + G + K F+ M
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
++ V P ++ +N +IA + + G D A L +M G+ PD T+ ++SG
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 125/274 (45%), Gaps = 6/274 (2%)
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
E +S +N ++ + ++ + A + M E V P N +++ Q A +
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXX 368
L +M + G+ D T ++ ++ + AL++L + + G EP+S+
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 369 XXXXXXXXXE-IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DV 423
+ + K V T S+I K G+++ A R+ D M +V
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 424 YSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKR 483
+ ++I G+C A LF KM+ PN VT++ LI + ++G ++AL+ +K+
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 484 IEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIF 517
+E G + +V +++I G+L+ + ++A+++F
Sbjct: 400 MEVLG-LTPSVFHVHTIIQGWLKGQKHEEALKLF 432
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 118/282 (41%), Gaps = 44/282 (15%)
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML--------------LS--- 351
L+ +SFG + ++ +++ +++ +T HA+D++ +ML LS
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 352 ------------------GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVL 393
GV+ +++T E+ ++ D L
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 394 TGNSLIDMYSKCGDLEAAQRIFDMMYERDV-----YSWNTIIGGYCHAGFCGKAYELFMK 448
+ + K DL A + M E+ + ++ ++I G A L +
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
M NVV +LITG+ ++ AL LF ++EK+G N +++ LI F ++G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP-SPNSVTFSVLIEWFRKNG 388
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+ +KA++ +++M+ + P+ V +I+ + + G+K +E
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGW---LKGQKHEE 427
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 7/272 (2%)
Query: 82 SKVRP--ITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHL 136
S VRP T +L++C + G +H ++G ++ FV + LV MY G L
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSL--FVSSALVIMYVDMGKL 185
Query: 137 SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQAC 196
ARK+FD+M R+ ++AM G ++ + +F +M GF D ++ +L AC
Sbjct: 186 LHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMAC 245
Query: 197 GKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWN 256
G+ G L+ G+ +H IR C + + N+I +Y KC + +A +F +M RD ++W+
Sbjct: 246 GQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWS 305
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
++I G+ +GD+ + K FD M +EG+EP VT+ ++++ G + + R M+ +
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEY 365
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+ P++ ++S+ ++ G A L M
Sbjct: 366 NIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 181/435 (41%), Gaps = 79/435 (18%)
Query: 119 NPFVETKLVSMYSKCGHL-SEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM 177
N + +KLV YSK HL + VF M RN+F+W+ +IG SR + +DLF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 178 VRHGFL-PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
R + PD+F LP IL+AC + ++G LIH + C +
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVL----------------------CLK 162
Query: 237 MGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIAS 296
+GF+ LF S +A++ + G + ARK FD M
Sbjct: 163 LGFSSSLFVS---------SALVIMYVDMGKLLHARKLFDDMP----------------- 196
Query: 297 YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
D +++M G+ Q+G L + R+M SG +
Sbjct: 197 ----------------------VRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
S+ + +HG ++ + GN++ DMY KC L+ A +F
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 417 MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQ 476
M RDV SW+++I GY G +++LF +M PN VT+ +++ G ++
Sbjct: 295 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVT---VL 533
+ L+ R+ ++ I + + S+ ++G ++A + M + P+ VL
Sbjct: 355 SW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAVMGAVL 410
Query: 534 SILPAFANLVAGKKV 548
S + N+ G++V
Sbjct: 411 SGCKVYGNVEVGERV 425
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 42/252 (16%)
Query: 388 LVDDVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELF 446
L +V+ + L+ YSK L + +F M R+++SWN IIG + +GF K+ +LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 447 MKM-QDSDSPPNVVTW-----------------------------------NALITGYMQ 470
++M ++S P+ T +AL+ Y+
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 471 SGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSV 530
G A LF D R+ + ++ G++Q G+ + +FR M + A +SV
Sbjct: 182 MGKLLHARKLF-----DDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSV 236
Query: 531 TVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
++S+L A L A K K +H +RR +++ N + D Y K L Y+ +F +
Sbjct: 237 VMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNM 296
Query: 591 PLKDIISWNIML 602
+D+ISW+ ++
Sbjct: 297 SRRDVISWSSLI 308
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 180/386 (46%), Gaps = 9/386 (2%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
++ ++ A + + +E V+ M +G D + ++ +C L + +
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF----KSMDERDSVTWNAIITGFCQNGDIE 269
+ G SI S++ + +G A L KS E + V +N +I G C+NG++
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMI 329
A + + M+++G+ +VT+N L+ GR A ++R M + PDV T++++I
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 330 SGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLV 389
F ++G A +L ++M+ S V+PN++T + +
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 390 DDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYEL 445
+V+T N+LI + K ++ ++F M + D++++NT+I GYC G A ++
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 446 FMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFL 505
F M P+++T L+ G +G + AL F + + K + ++N +I G
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI-GIVAYNIMIHGLC 432
Query: 506 QSGQKDKAMQIFRRMQFFQIAPNSVT 531
++ + +KA ++F R+ + P++ T
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDART 458
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 193/442 (43%), Gaps = 81/442 (18%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVGN-- 117
C LS A+++L + + G + +T+ +LL C+ +G I +V +
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN---RIGDAFSLVILMVKSGY 172
Query: 118 -VNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVD 172
N V L+ K G L+ A ++ +EM ++ L T++ ++ W +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 173 LFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA 232
+ DM++ PD ++ K G+L+ + ++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY----------------------- 269
Query: 233 KCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNI 292
K++ +S + ++VT+N+II G C +G + A+K FD M +G P +VT+N
Sbjct: 270 --------KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 293 LIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
LI+ + + D + L ++M G D++T++++I G+ Q G+ ALD+ M+
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 353 VEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQ 412
V P+ IT +HG+ V G++E+A
Sbjct: 382 VTPDIIT---------------HCILLHGLCVN--------------------GEIESAL 406
Query: 413 RIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGY 468
FD M E + Y ++N +I G C A KA+ELF ++ P+ T+ +I G
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 469 MQSGAEDQALDLFKRIEKDGKI 490
++G +A +L +R++++G I
Sbjct: 467 CKNGPRREADELIRRMKEEGII 488
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 161/359 (44%), Gaps = 25/359 (6%)
Query: 260 TGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLT 319
TGF + E A F M P +V + L+ + L R + + +KME +G++
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 320 PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI 379
D+Y+++ +I F + R AL +L KM+ G EP+ +T +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 380 HGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCH 435
+ VK +V+ N+LID K G+L A + + M ++ DV ++NT++ G C+
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 436 AGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA 495
+G A + M P+VVT+ ALI +++ G D+A +L+K + + NV
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV- 282
Query: 496 SWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLV---AGKKVKEIH 552
++NS+I G G+ A + F M PN VT +++ F G K+ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 553 CCALRRNLVSEISVSNILIDSYAKSGNL---------MYSRRIFDGLPLKDIISWNIML 602
C ++I N LI Y + G L M SRR+ DII+ I+L
Sbjct: 343 SC---EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV-----TPDIITHCILL 393
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 11/348 (3%)
Query: 17 SIPSYSASQFEFIASTRVHANSNYVSMSIRSLPYPKFM--DAQLNQLCSNGPLSDAVAIL 74
SI ++ + F R+ + V + ++S P + + ++ LC NG L+ A+ +L
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 75 DSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGRELHARIGLVGNVNPFVETKLVSMYSKC 133
+ + ++G +TY LL C + R L + N + T L+ ++ K
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 134 GHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLL 189
G+L EA++++ EM + N T++++I + F M G P+
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 190 PKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE 249
++ K ++ G + G + I N+++ Y + G++ A +F M
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 250 R----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
R D +T ++ G C NG+IE A FD M+E G+V +NI+I + + +
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 306 AVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
A +L ++ G+ PD T++ MI G + G A +L+R+M G+
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 201/453 (44%), Gaps = 58/453 (12%)
Query: 167 WEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLET----GRLIHSVAIRHGMCSSIR 222
+ + + LF DM LP ++L A K E R + + I H + S
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF-- 117
Query: 223 VNNSIMAVYAKCGEMGFA----KKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+++ + +C + A K+ K E VT+ +++ GFC +A D +
Sbjct: 118 --TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
G EP +V +N +I S + G+ + A+D+++ M+ G+ PDV T++S+I+ G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
+ +L M+ G+ P DV+T ++L
Sbjct: 236 GVSARILSDMMRMGISP-----------------------------------DVITFSAL 260
Query: 399 IDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
ID+Y K G L A++ ++ M +R ++ ++N++I G C G +A ++ +
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
PN VT+N LI GY ++ D + + + +DG + + ++N+L G+ Q+G+ A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG-VDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
++ RM + P+ T +L + GK + + + +V I+ NI+I
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY-NIIIKG 438
Query: 574 YAKSGNLMYSRRIFDGLPLK----DIISWNIML 602
K+ + + +F L LK D+I++ M+
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 165/374 (44%), Gaps = 47/374 (12%)
Query: 126 LVSMYSKCGHLSEARKVFDEM----RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
LV+ + EA + D++ E N+ ++ +I + + +D+ M + G
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
PD ++ G I S +R G+ + ++++ VY K G++ AK
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 242 KLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
K + M +R + VT+N++I G C +G +++A+K + + +G P VT+N LI Y
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNS 357
+ R D + ++ M G+ D +T++++ G+ Q G+ A +L +M+ GV P
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP-- 392
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL-EAAQRIFD 416
D+ T N L+D G + +A R+ D
Sbjct: 393 ---------------------------------DMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 417 MMYERDVY---SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGA 473
+ + V ++N II G C A A+ LF + P+V+T+ ++ G +
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL 479
Query: 474 EDQALDLFKRIEKD 487
+A +L+++++K+
Sbjct: 480 WREAHELYRKMQKE 493
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 176/410 (42%), Gaps = 48/410 (11%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
T L+ + +C LS A +M E ++ T+ +++ + E + L +V
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G+ P+ + I+ + + G + T + + G+ + NS++ G G
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 240 AKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
+ ++ M D +T++A+I + + G + +A+K ++ M + V P +VT+N LI
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
G D A ++ + S G P+ T++++I+G+ + R + +L M GV+
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD- 356
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
D T N+L Y + G AA+++
Sbjct: 357 ----------------------------------GDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 416 DMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
M D+Y++N ++ G C G GKA +Q S + ++T+N +I G ++
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
+ A LF + G + +V ++ +++ G + +A +++R+MQ
Sbjct: 443 DKVEDAWYLFCSLALKG-VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 20/332 (6%)
Query: 35 HANSNYVSMS----IRSLPY-PKFM--DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPI 87
H N Y +MS I L Y P + + ++ LC G ++ A+ +L + + G + +
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 88 TYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFD 144
TY +L+ V + + R+G+ +V F + L+ +Y K G L EA+K ++
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITF--SALIDVYGKEGQLLEAKKQYN 278
Query: 145 EMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCG 200
EM +R N+ T++++I +E + +V GF P+ ++ K
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Query: 201 DLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM----DERDSVTWN 256
++ G I V R G+ N++ Y + G+ A+K+ M D T+N
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Query: 257 AIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESF 316
++ G C +G I +A + +Q+ G++T+NI+I + + + A L +
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
G++PDV T+ +M+ G +K A +L RKM
Sbjct: 459 GVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 181/415 (43%), Gaps = 49/415 (11%)
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITG 261
LE G L+ ++++R +C+S A G + ++L + S+ +N +T
Sbjct: 22 LEKGNLVTALSLR--ICNS----------RAFSGRSDYRERLRSGLH---SIKFNDALTL 66
Query: 262 FCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPD 321
FC M E P +V ++ L+ + +L + + + L R +E G++ D
Sbjct: 67 FCD-------------MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD 113
Query: 322 VYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT----VXXXXXXXXXXXXXXXXX 377
+Y+++++I F + R AL L KM+ G EP+ +T V
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD 173
Query: 378 EIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGY 433
+I G+G + +V+ N++ID + G + A + M + DV ++N++I
Sbjct: 174 QIVGLGYE----PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 434 CHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK--DGKIK 491
H+G G + + M P+V+T++ALI Y G E Q L+ K+ + +
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVY---GKEGQLLEAKKQYNEMIQRSVN 286
Query: 492 RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEI 551
N+ ++NSLI G G D+A ++ + PN+VT +++ + +I
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 552 HCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGL----PLKDIISWNIML 602
C R + + N L Y ++G + ++ + D+ ++NI+L
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 11/271 (4%)
Query: 93 LQSC-IDRDCIEVGRELHA---RIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRE 148
++SC ++RD G H + G + +V ++ + LV +Y G + A KVF+EM E
Sbjct: 127 VRSCGLNRD-FRTGSGFHCLALKGGFISDV--YLGSSLVVLYRDSGEVENAYKVFEEMPE 183
Query: 149 RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLI 208
RN+ +W+AMI ++E + + L+ M + P+++ +L AC G L GR +
Sbjct: 184 RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV 243
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDI 268
H + G+ S + ++NS++++Y KCG++ A ++F +D V+WN++I G+ Q+G
Sbjct: 244 HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLA 303
Query: 269 EQARKYFDAMQ-EEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSS 327
QA + F+ M + G +P +T+ +++S G M GL P++ +S
Sbjct: 304 MQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSC 363
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
++ + G AL+L+ M + +PNS+
Sbjct: 364 LVDLLGRFGLLQEALELIENMPM---KPNSV 391
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 164/402 (40%), Gaps = 78/402 (19%)
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R G+ D + L +++CG D TG H +A++ G S + + +S++ +Y
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY------- 165
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
RDS G++E A K F+ M E
Sbjct: 166 -----------RDS-------------GEVENAYKVFEEMPER----------------- 184
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSI 358
+V +W++MISGF Q+ R L L KM S +PN
Sbjct: 185 ----------------------NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDY 222
Query: 359 TVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM 418
T +H + M L + NSLI MY KCGDL+ A RIFD
Sbjct: 223 TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF 282
Query: 419 YERDVYSWNTIIGGYCHAGFCGKAYELF-MKMQDSDSPPNVVTWNALITGYMQSGAEDQA 477
+DV SWN++I GY G +A ELF + M S + P+ +T+ +++ +G +
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 478 LDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILP 537
F + + G +K + ++ L+ + G +A+++ M + PNSV S+L
Sbjct: 343 RKFFNLMAEHG-LKPELNHYSCLVDLLGRFGLLQEALELIENM---PMKPNSVIWGSLL- 397
Query: 538 AFANLVAGKKVKEIHCCALRRNLVSEISVSNI-LIDSYAKSG 578
F+ V G I R L + + +++ L + YA G
Sbjct: 398 -FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVG 438
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 32/256 (12%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
H + +K + DV G+SL+ +Y G++E A ++F+ M ER+V SW +I G+
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQA-----------LDLFKRIE-- 485
+L+ KM+ S S PN T+ AL++ SGA Q L + I
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 486 ------KDGKIK-----------RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQ-IAP 527
K G +K ++V SWNS+IAG+ Q G +A+++F M P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
+++T L +L + + K+ ++ L E++ + L+D + G L + +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 588 DGLPLK-DIISWNIML 602
+ +P+K + + W +L
Sbjct: 382 ENMPMKPNSVIWGSLL 397
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
+V ++L+ Y SG + A +F+ + + RNV SW ++I+GF Q + D +++
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPE-----RNVVSWTAMISGFAQEWRVDICLKL 208
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
+ +M+ PN T ++L A A + + +HC L L S + +SN LI Y K
Sbjct: 209 YSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK 268
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
G+L + RIFD KD++SWN M++
Sbjct: 269 CGDLKDAFRIFDQFSNKDVVSWNSMIA 295
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 5/286 (1%)
Query: 240 AKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
A L M E + II G C+ GD E A M+E ++ +V +N +I +
Sbjct: 29 ALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCK 88
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
G A +L +M G+ PDV T+S MI F + GR A LLR M+ + P+ +T
Sbjct: 89 DGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVT 148
Query: 360 VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY 419
EI+G ++ + +T NS+ID + K L A+R+ D M
Sbjct: 149 FSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMA 208
Query: 420 ER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+ DV +++T+I GYC A E+F +M N VT+ LI G+ Q G D
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
Query: 476 QALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQ 521
A DL + G + N ++ S++A + KA I +Q
Sbjct: 269 AAQDLLNVMISSG-VAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSK-----VRPITYMNLLQSCIDRDCIEVGRELHARI 112
+N LC G + A+A++D + E+G + + + M +S ++ + E H +
Sbjct: 17 MNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALN--LLSKMEETHIKA 74
Query: 113 GLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWE 168
+V + ++ K GH A+ +F EM ++ +F T+S MI + R W
Sbjct: 75 HVV------IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 169 EVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIM 228
+ L DM+ PD ++ A K G + I+ +R G+ +
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT-------- 180
Query: 229 AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLV 288
++T+N++I GFC+ + A++ D+M + P +V
Sbjct: 181 -----------------------TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 289 TWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
T++ LI Y + R D +++ +M G+ + T++++I GF Q G A DLL M
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Query: 349 LLSGVEPNSIT 359
+ SGV PN IT
Sbjct: 278 ISSGVAPNYIT 288
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 143/319 (44%), Gaps = 14/319 (4%)
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS-IRVNNSIMAVYAKCG 235
MV G PD ++ G C + GR++ ++A+ M + +I+ K G
Sbjct: 1 MVETGCRPDVVTFTTLMN--GLCCE---GRVLQALALVDRMVEEGHQPYGTIINGLCKMG 55
Query: 236 EMGFAKKLFKSMDERD----SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWN 291
+ A L M+E V +NAII C++G A+ F M ++G+ P ++T++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
+I S+ + GR A L+R M + PDV T+S++I+ ++G+ A ++ ML
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
G+ P +IT + S DV+T ++LI+ Y K ++
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 412 QRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
IF M+ R + ++ T+I G+C G A +L M S PN +T+ +++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 468 YMQSGAEDQALDLFKRIEK 486
+A + + ++K
Sbjct: 296 LCSKKELRKAFAILEDLQK 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
M G PDV T++++++G +GR AL L+ +M+ G +P +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNT 428
++ +K +V N++ID K G AQ +F M+++ DV +++
Sbjct: 61 LNLLSKMEETHIKAHVV----IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I +C +G A +L M + P+VVT++ALI ++ G +A +++ + + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+ ++NS+I GF + + + A ++ M +P+ VT +++ +
Sbjct: 177 IFPTTI-TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
EI C RR +V+ LI + + G+L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
DV+T +L++ G + A + D M E + TII G C G A L KM+
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
++ +VV +NA+I + G A +LF + G I +V +++ +I F +SG+
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG-IFPDVITYSGMIDSFCRSGRW 127
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNIL 570
A Q+ R M QI P+ VT +++ A + +EI+ LRR + N +
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 571 IDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
ID + K L ++R+ D + K D+++++ +++
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 43/373 (11%)
Query: 120 PFVETKL-VSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMV 178
PFV L S S G + A K ++ + + W+ +I S ++ E+ + ++ M+
Sbjct: 41 PFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQML 100
Query: 179 RHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMG 238
R G LPD P ++++ + + + G +H ++ G+ + + N+++ +Y
Sbjct: 101 RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGS----- 155
Query: 239 FAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYN 298
F+ D ARK FD M + LVTWN ++ +Y
Sbjct: 156 -----FR---------------------DQASARKLFDEMPHKN----LVTWNSILDAYA 185
Query: 299 QLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV-EPNS 357
+ G A + +M DV TWSSMI G+ ++G AL++ +M+ G + N
Sbjct: 186 KSGDVVSARLVFDEMSE----RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 358 ITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF-- 415
+T+ +H + + L V+ SLIDMY+KCG + A +F
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 416 DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAED 475
+ E D WN IIGG GF ++ +LF KM++S P+ +T+ L+ G
Sbjct: 302 ASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Query: 476 QALDLFKRIEKDG 488
+A FK +++ G
Sbjct: 362 EAWHFFKSLKESG 374
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 3/226 (1%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF-LP 184
++ Y+K G + AR VFDEM ER++ TWS+MI + + + +++F M+R G
Sbjct: 180 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 239
Query: 185 DEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+E + ++ AC G L G+ +H + + ++ + S++ +YAKCG +G A +F
Sbjct: 240 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF 299
Query: 245 --KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGR 302
S+ E D++ WNAII G +G I ++ + F M+E ++P +T+ L+A+ + G
Sbjct: 300 YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGL 359
Query: 303 CDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
A + ++ G P ++ M+ ++ G A D + +M
Sbjct: 360 VKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 45/321 (14%)
Query: 284 EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALD 343
E V+ + ++ + G D A + K+ P Y W+ +I GF+ ++
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD----PPNYGWNFVIRGFSNSRNPEKSIS 94
Query: 344 LLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYS 403
+ +ML G+ P+ +T +H VK L D+ N+LI MY
Sbjct: 95 VYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYG 154
Query: 404 KCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNA 463
D +A+++FD M +++ +WN+I+ Y +G A +F +M + D VVTW++
Sbjct: 155 SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD----VVTWSS 210
Query: 464 LITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFF 523
+I GY++ G ++AL++F ++ + G K
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSK-------------------------------- 238
Query: 524 QIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYS 583
N VT++S++ A A+L A + K +H L +L + + LID YAK G++ +
Sbjct: 239 ---ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 584 RRIFDGLPLK--DIISWNIML 602
+F +K D + WN ++
Sbjct: 296 WSVFYRASVKETDALMWNAII 316
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 85/392 (21%)
Query: 198 KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYA--KCGEMGFAKKLFKSMDERDSVTW 255
+C + IH++ I G+ + ++ A G++ +A K + + + W
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 256 NAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES 315
N +I GF + + E++ + M G+ P +T+ L+ S ++L + L +
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 316 FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXX 375
GL D++ +++I + A L +M P+
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEM------PHK------------------ 172
Query: 376 XXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCH 435
+++T NS++D Y+K GD+ +A+ +FD M ERDV +W+++I GY
Sbjct: 173 ---------------NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVK 217
Query: 436 AGFCGKAYELF---MKMQDSDS---------------------------------PPNVV 459
G KA E+F M+M S + P V+
Sbjct: 218 RGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVI 277
Query: 460 TWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVA-SWNSLIAGFLQSGQKDKAMQIFR 518
+LI Y + G+ A +F R +K A WN++I G G +++Q+F
Sbjct: 278 LQTSLIDMYAKCGSIGDAWSVFYR----ASVKETDALMWNAIIGGLASHGFIRESLQLFH 333
Query: 519 RMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+M+ +I P+ +T L +L A ++ G VKE
Sbjct: 334 KMRESKIDPDEITFLCLLAACSH---GGLVKE 362
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 219/473 (46%), Gaps = 12/473 (2%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
++S+Y + G A ++F ++E ++ ++ ++ E + + ++ DM R G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
F P+ F +L+A K ++ + + G C ++++ + G + +
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
+L + + SV +NA+I G C+ D + A + M E+G+ P +++++ LI G
Sbjct: 237 ELAERFEPVVSV-YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 302 RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS-GVEPNSITV 360
+ ++A + +M G P++YT SS++ G +G T+ ALDL +M+ G++PN +
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 361 XXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYE 420
+ ++ ++ T SLI+ ++K G L+ A I++ M
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 421 R----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQ 476
+V + ++ C +A L M + P+V T+NA I G +G D
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 477 ALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSIL 536
A +F+++E+ + N+ ++N L+ G ++ + ++A + R + + +S T ++L
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 537 PAFANL-VAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFD 588
N + G ++ + + EI++ N++I +Y K G + ++ D
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITM-NMIILAYCKQGKAERAAQMLD 587
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 197/482 (40%), Gaps = 55/482 (11%)
Query: 139 ARKVFDEMRERNLF-----TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKIL 193
A F + NLF T+ MI + + + V L M GF E L ++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 194 QACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD----E 249
+ G E + G S+++ N ++ + +++ M E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDL 309
+ T+N ++ C+N ++ A+K M +G P V++ +I+S ++G +L
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 310 MRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX 369
+ E P V ++++I+G ++ A +L+R+M+ G+ PN
Sbjct: 239 AERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN------------- 280
Query: 370 XXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYS 425
V++ ++LI++ G +E A M +R ++Y+
Sbjct: 281 ----------------------VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 426 WNTIIGGYCHAGFCGKAYELFMKM-QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRI 484
++++ G G A +L+ +M + PNVV +N L+ G+ G +A+ +F +
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 485 EKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVA 544
E+ G N+ ++ SLI GF + G D A+ I+ +M PN V +++ A
Sbjct: 379 EEIG-CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 545 GKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLSQ 604
K+ + + + N + N I +G L ++ ++F + + NI+
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 605 EI 606
E+
Sbjct: 498 EL 499
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 184/459 (40%), Gaps = 47/459 (10%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
L LC N + A +L ++ +G ++Y ++ S + ++ GREL R V +
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS 247
Query: 118 V-------------------------------NPFVETKLVSMYSKCGHLSEARKVFDEM 146
V N + L+++ G + A +M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 147 RER----NLFTWSAMIGACSREKSWEEVVDLFYDMVR-HGFLPDEFLLPKILQACGKCGD 201
+R N++T S+++ C + + +DL+ M+R G P+ ++Q G+
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 202 LETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFA----KKLFKSMDERDSVTWNA 257
+ + S G +IR S++ +AK G + A K+ S + V +
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 258 IITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMES-F 316
++ C++ ++A + M +E P + T+N I GR D A + R+ME
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 317 GLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXX 376
P++ T++ ++ G + R A L R++ + GVE +S T
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 377 XEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM------YERDVYSWNTII 430
++ G + D +T N +I Y K G E A ++ D++ + DV S+ +I
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
G C + L +M + P++ TW+ LI ++
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 182/404 (45%), Gaps = 19/404 (4%)
Query: 152 FTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRL--IH 209
T++A+IGAC+R E+ ++L M + G+ D ++Q+ + +++ L ++
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQN 265
R + +++ N I+ +AK G+ A +L + T +II+ +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 266 GDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTW 325
G +A F+ +++ G++P +N L+ Y + G A ++ +ME G++PD +T+
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 326 SSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXX----XXXXXXXXEIHG 381
S +I + GR A +L++M V+PNS E+
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 382 IGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAG 437
IGVK D N +ID + K L+ A FD M E D +WNT+I +C G
Sbjct: 438 IGVK----PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 438 FCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW 497
A E+F M+ P T+N +I Y D L +++ G I NV +
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG-ILPNVVTH 552
Query: 498 NSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
+L+ + +SG+ + A++ M+ + P+S +++ A+A
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 173/411 (42%), Gaps = 56/411 (13%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
++S + G EA +F+E+R+ + ++A++ + ++ + +M + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMA-VYAKCGEMGFA 240
PDE ++ A G E+ R++ ++ ++ N+ + + + A + G
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIV----LKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 241 KKLFKSMDERDSVT-------WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNIL 293
+K F+ + E S+ +N +I F + ++ A FD M EG+EP VTWN L
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 294 IASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV 353
I + + GR +A ++ ME G P T++ MI+ + + R LL KM G+
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 354 EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQR 413
PN V+T +L+D+Y K G A
Sbjct: 546 LPN-----------------------------------VVTHTTLVDVYGKSGRFNDAIE 570
Query: 414 IFDMMYERDVYS----WNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYM 469
+ M + +N +I Y G +A F M P+++ N+LI +
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630
Query: 470 QSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
+ + +A + + ++++G +K +V ++ +L+ ++ + K ++ M
Sbjct: 631 EDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 171/377 (45%), Gaps = 25/377 (6%)
Query: 214 RHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKS--MDERDSVT---WNAIITGFCQNGDI 268
+H +C S + SI+ ++A +G ++KL+++ + ++ ++T +NA+I +N DI
Sbjct: 159 KHNLCFSYELLYSIL-IHA----LGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDI 213
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD--IAVDLMRKMESFGLTPDVYTWS 326
E+A M+++G + V ++++I S + + D + + L +++E L DV +
Sbjct: 214 EKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVN 273
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT----VXXXXXXXXXXXXXXXXXEIHGI 382
+I GF + G AL LL +G+ + T + E+
Sbjct: 274 DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS 333
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGF 438
G+K N+L+ Y K G L+ A+ + M +R D ++++ +I Y +AG
Sbjct: 334 GIK----PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
A + +M+ D PN ++ L+ G+ G + + K ++ G +K + +N
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG-VKPDRQFYN 448
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
+I F + D AM F RM I P+ VT +++ +E+ RR
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 559 NLVSEISVSNILIDSYA 575
+ + NI+I+SY
Sbjct: 509 GCLPCATTYNIMINSYG 525
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 146/357 (40%), Gaps = 54/357 (15%)
Query: 49 PYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGREL 108
P + +A L GPL DA +++ + ++G TY L+ + ++ GR
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN-----AGRWE 391
Query: 109 HARIGL----VGNVNP--FVETKLVSMYSKCGHLSEARKVFDEMR--------------- 147
ARI L G+V P FV ++L++ + G + +V EM+
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 148 ------------------------ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
E + TW+ +I + ++F M R G L
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
P ++ + G + + + G+ ++ + +++ VY K G A +
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 244 FKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
+ M + S +NA+I + Q G EQA F M +G++P L+ N LI ++ +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 300 LGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
R A +++ M+ G+ PDV T+++++ + + + +M++SG +P+
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLF----TWSAMIGACSREKSWEEVVDLFYDMVRHG 181
L+ + K G A ++F+ M R T++ MI + ++ W+++ L M G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
LP+ ++ GK G G+ S + N+++ YA+ G A
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 242 KLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASY 297
F+ M + + N++I F ++ +A M+E GV+P +VT+ L+ +
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Query: 298 NQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
++ + + +M G PD S + S +T A
Sbjct: 665 IRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 74 LDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETK----LVSM 129
LD+ ++ + TY+ +L S C+ +G+ +H GL+ + + L+ M
Sbjct: 192 LDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIH---GLILKRASLISLETGNALIDM 248
Query: 130 YSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDM-VRHGFLPDEFL 188
Y KC LS+A +VF E+ +++ +W++MI + +E +DLF M G PD +
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
L +L AC G ++ GR +H + G+ + +I+ +YAKCG + A ++F +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 249 ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
++ TWNA++ G +G ++ +YF+ M + G +P LVT+ + + G D
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 309 LMRKMES--FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
KM+S + L P + + MI + G AL+L++ M
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 173/426 (40%), Gaps = 76/426 (17%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIH 209
++FT+ + A CGK + G+ IH
Sbjct: 105 DMFTFPPVFKA-----------------------------------CGKFSGIREGKQIH 129
Query: 210 SVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIE 269
+ + G I V NS++ Y CGE A K+F M RD V+W IITGF + G +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLG---------------------------- 301
+A F M VEP L T+ ++ S ++G
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 302 ----RCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL-SGVEPN 356
+C+ D MR D +W+SMISG R+ A+DL M SG++P+
Sbjct: 247 DMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
+ +H + + D G +++DMY+KCG +E A IF+
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 417 MMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQ 476
+ ++V++WN ++GG G ++ F +M PN+VT+ A + +G D+
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 477 ALDLFKRIE-KDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSI 535
F +++ ++ + + + +I ++G D+A+++ + M + P+ +I
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM---PVKPDVRICGAI 482
Query: 536 LPAFAN 541
L A N
Sbjct: 483 LSACKN 488
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 201/483 (41%), Gaps = 67/483 (13%)
Query: 157 MIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHG 216
+I CS + ++++ ++ L D+ ++ K++ GK D + +S I H
Sbjct: 12 LISRCSSLRVFKQIQT---QLITRDLLRDDLIINKVVTFLGKSADFAS----YSSVILHS 64
Query: 217 MCSSIRV--NNSIMAVYAKCGE---MGFAKKLFKSMD-ERDSVTWNAIITGFCQNGDIEQ 270
+ S + N++++ YA C + FA K F S D T+ + + I +
Sbjct: 65 IRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIRE 124
Query: 271 ARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTP--DVYTWSSM 328
++ + + G + N L+ Y G A + FG P DV +W+ +
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV------FGEMPVRDVVSWTGI 178
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
I+GFT+ G ALD KM VEPN T IHG+ +K +
Sbjct: 179 ITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMK 448
+ + TGN+LIDMY KC L A R+F + ++D SWN++I G H +A +LF
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 449 MQDSDS-PPN------------------------------VVTWN-----ALITGYMQSG 472
MQ S P+ + W+ A++ Y + G
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTV 532
+ AL++F I +NV +WN+L+ G G ++++ F M PN VT
Sbjct: 356 YIETALEIFNGIR-----SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTF 410
Query: 533 LSILPAFANL-VAGKKVKEIHCCALRR-NLVSEISVSNILIDSYAKSGNLMYSRRIFDGL 590
L+ L A + + + + H R NL ++ +ID ++G L + + +
Sbjct: 411 LAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
Query: 591 PLK 593
P+K
Sbjct: 471 PVK 473
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 162/391 (41%), Gaps = 85/391 (21%)
Query: 250 RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL--VTWNILIASYNQLGRCDIAV 307
RD + N ++T ++ D + ++ + L ++N L++SY + + +
Sbjct: 36 RDDLIINKVVTFLGKSADFAS----YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTI 91
Query: 308 DLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXX 367
+ S G +PD++T+ + F G+ SG+
Sbjct: 92 FAYKTFVSNGFSPDMFTFPPV---FKACGK------------FSGIREGK---------- 126
Query: 368 XXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWN 427
+IHGI KM DD+ NSL+ Y CG+ A ++F M RDV SW
Sbjct: 127 ----------QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWT 176
Query: 428 TIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTW-------------------------- 461
II G+ G +A + F KM D PN+ T+
Sbjct: 177 GIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKR 233
Query: 462 ---------NALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDK 512
NALI Y++ A+ +F +EK K+ SWNS+I+G + + +
Sbjct: 234 ASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKV-----SWNSMISGLVHCERSKE 288
Query: 513 AMQIFRRMQFFQ-IAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILI 571
A+ +F MQ I P+ + S+L A A+L A + +H L + + + ++
Sbjct: 289 AIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIV 348
Query: 572 DSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
D YAK G + + IF+G+ K++ +WN +L
Sbjct: 349 DMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 44/309 (14%)
Query: 88 TYMNLLQSCIDRDCIEVGRELHARIGLVGNVNP-FVETKLVSMYSKCGHLSEARKVFDEM 146
T+ + ++C I G+++H + +G + +V+ LV Y CG A KVF EM
Sbjct: 108 TFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEM 167
Query: 147 RERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGR 206
R++ +W+ +I +R ++E +D F M P+ +L + G+ G L G+
Sbjct: 168 PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGK 224
Query: 207 LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNG 266
IH + ++ S+ N+++ +Y KC ++ A ++F ++++D V+WN++I+G
Sbjct: 225 GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 267 DIEQARKYFDAMQ-EEGVEP------------------------------GLVTWNILIA 295
++A F MQ G++P + W+ I
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 296 S-----YNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
+ Y + G + A+++ + S +V+TW++++ G G +L +M+
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRS----KNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 351 SGVEPNSIT 359
G +PN +T
Sbjct: 401 LGFKPNLVT 409
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
++ N+L+ Y G A +F + R+V SW +I GF ++G +A+
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPV-----RDVVSWTGIITGFTRTGLYKEALDT 194
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
F +M + PN T + +L + + K IH L+R + + N LID Y K
Sbjct: 195 FSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVK 251
Query: 577 SGNLMYSRRIFDGLPLKDIISWNIMLS 603
L + R+F L KD +SWN M+S
Sbjct: 252 CEQLSDAMRVFGELEKKDKVSWNSMIS 278
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 193/454 (42%), Gaps = 71/454 (15%)
Query: 133 CGHLSEARKVFDEMRERNLF-----TWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEF 187
C EA ++F+ + R F T+ A++ AC R KS V ++ M+ +GF P+++
Sbjct: 100 CNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQY 159
Query: 188 LLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
++ N I+ ++ KCG + A++LF +
Sbjct: 160 MM-----------------------------------NRILLMHVKCGMIIDARRLFDEI 184
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIA- 306
ER+ ++ +II+GF G+ +A + F M EE + T+ +++ + LG +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 307 ---------------------VDLMRKME-------SFGLTPDVYT--WSSMISGFTQKG 336
+D+ K +F P+ T W+++I+G+ G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
+ AL LL M SGV + T+ + H ++ +++
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
+L+D YSK G ++ A+ +FD + +++ SWN ++GGY + G A +LF KM ++ P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
N VT+ A+++ SG +Q ++F + + IK + +I + G D+A+
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
RR +L+ NL G+ V E
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAE 518
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 6/290 (2%)
Query: 65 GPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHA---RIGLVGNVNPF 121
G +A + + E+ S T+ +L++ I VG++LH ++G+V N F
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT--F 260
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG 181
V L+ MYSKCG + +AR F+ M E+ W+ +I + EE + L YDM G
Sbjct: 261 VSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG 320
Query: 182 FLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
D+F L +++ K LE + H+ IR+G S I N +++ Y+K G + A+
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 242 KLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLG 301
+F + ++ ++WNA++ G+ +G A K F+ M V P VT+ ++++ G
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 302 RCDIAVDLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLL 350
+ ++ M E G+ P ++ MI + G A+ +R+ L
Sbjct: 441 LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPL 490
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 158/341 (46%), Gaps = 41/341 (12%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGS-KVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
+Q+ +L +A + + L + S KV TY L+++CI I + ++ +
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 115 VG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDL 173
G ++ +++ M+ KCG + +AR++FDE+ ERNL+++ ++I ++ E +L
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 174 FYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
F M + +L+A G + G+ +H A++ G+ + V+ ++ +Y+K
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK 271
Query: 234 CGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGV---------- 283
CG++ A+ F+ M E+ +V WN +I G+ +G E+A M++ GV
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
Query: 284 -------------------------EPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGL 318
E +V L+ Y++ GR D A + K+
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPR--- 388
Query: 319 TPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSIT 359
++ +W++++ G+ GR A+ L KM+ + V PN +T
Sbjct: 389 -KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 30/237 (12%)
Query: 396 NSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSP 455
N ++ M+ KCG + A+R+FD + ER++YS+ +II G+ + G +A+ELF M + S
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 456 PNVVTWNALITG----------------YMQSGAEDQAL---DLFKRIEKDGKIK----- 491
T+ ++ ++ G D L K G I+
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 492 ------RNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAG 545
+ +WN++IAG+ G ++A+ + M+ ++ + T+ ++ L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 546 KKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIML 602
+ K+ H +R SEI + L+D Y+K G + +R +FD LP K+IISWN ++
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALM 398
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFV- 122
+G +A+ +L + + G + T +++ +E+ ++ HA + G + V
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 123 ETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGF 182
T LV YSK G + AR VFD++ +N+ +W+A++G + + V LF M+
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 183 LPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAK 241
P+ +L AC G E G + S++ HG+ ++ + + G + A
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 242 KLFKSMDERDSVT-WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQL 300
+ + +V W A++ ++E R + + G E L + ++ YN +
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEK-LGNYVVMYNMYNSM 541
Query: 301 GRCDIAVDLMRKMESFGLT 319
G+ A ++ +ES GL+
Sbjct: 542 GKTAEAAGVLETLESKGLS 560
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 449 MQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
M + P N ++ +++ G A LF I + RN+ S+ S+I+GF+ G
Sbjct: 149 MMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE-----RNLYSYYSIISGFVNFG 203
Query: 509 QKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSN 568
+A ++F+ M + T +L A A L + K++H CAL+ +V VS
Sbjct: 204 NYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSC 263
Query: 569 ILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
LID Y+K G++ +R F+ +P K ++WN +++
Sbjct: 264 GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIA 298
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 166/359 (46%), Gaps = 44/359 (12%)
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
VT +++ GFCQ ++A D+M G P +V +N +I + + A+++
Sbjct: 150 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 313 MESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXX 372
ME G+ D T++++ISG + GR A LLR M+ ++PN
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN---------------- 253
Query: 373 XXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNT 428
V+ +LID + K G+L A+ ++ M R +V+++N+
Sbjct: 254 -------------------VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 429 IIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+I G+C G G A +F M P+VVT+N LITG+ +S + + LF + G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 489 KIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKV 548
+ + ++N+LI G+ Q+G+ + A ++F RM ++P+ VT +L N +K
Sbjct: 355 LVG-DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 549 KEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
+ + + +I NI+I ++ L + +F L K D I++ M+S
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 192/436 (44%), Gaps = 48/436 (11%)
Query: 133 CGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFL 188
C +A +F EM + ++ ++ ++ ++ ++ V+ L++ M G D +
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMD 248
++ +C L + ++ G SI S++ + + A L SMD
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 249 E----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCD 304
+ V +N +I G C+N D+ A + F M+++G+ VT+N LI+ + GR
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 305 IAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXX 364
A L+R M + P+V ++++I F ++G A +L ++M+ V PN T
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 365 XXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF-DMMYER-- 421
+ + V DV+T N+LI + K +E ++F +M Y+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 422 -DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALD- 479
D +++NT+I GYC AG A ++F +M D P++VT+N L+ +G ++AL
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 480 ----------------------------------LFKRIEKDGKIKRNVASWNSLIAGFL 505
LF+ + + G +K + ++ ++I+G
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-VKPDAIAYITMISGLC 475
Query: 506 QSGQKDKAMQIFRRMQ 521
+ G + +A ++ RRM+
Sbjct: 476 RKGLQREADKLCRRMK 491
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 155/348 (44%), Gaps = 45/348 (12%)
Query: 150 NLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGD-LETGRLI 208
N+ ++ +I + + +++FY M + G D ++ G + RL+
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 209 HSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIITGFCQ 264
+ ++ + ++ +++ + K G + A+ L+K M R V T+N++I GFC
Sbjct: 243 RDM-VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 265 NGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYT 324
+G + A+ FD M +G P +VT+N LI + + R + + L +M GL D +T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 325 WSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGV 384
++++I G+ Q G+ A + +M+ GV P
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP----------------------------- 392
Query: 385 KMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCG 440
D++T N L+D G +E A + + + + D+ ++N II G C
Sbjct: 393 ------DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 441 KAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
+A+ LF + P+ + + +I+G + G + +A L +R+++DG
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 9/318 (2%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRD-CIEVGR 106
+P + +N LC N L++A+ + + ++G + +TY L+ + + R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 107 ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACS 162
L + + N T L+ + K G+L EAR ++ EM R N+FT++++I
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ +F MV G PD ++ K +E G + G+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAM 278
N+++ Y + G++ A+K+F M + D VT+N ++ C NG IE+A + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
Q+ ++ ++T+NI+I + + A L R + G+ PD + +MISG +KG
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 339 YHALDLLRKMLLSGVEPN 356
A L R+M G P+
Sbjct: 481 READKLCRRMKEDGFMPS 498
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 9/342 (2%)
Query: 269 EQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSM 328
+ A F M + P +V + ++ ++ + DI + L KME+ G++ D+Y+++ +
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 329 ISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSL 388
I F + R AL LL KM+ G P+ +T+ +
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 389 VDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYE 444
V +V+ N++I+ K DL A +F M ++ D ++NT+I G ++G A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 445 LFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGF 504
L M PNV+ + ALI +++ G +A +L+K + + + NV ++NSLI GF
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP-NVFTYNSLINGF 299
Query: 505 LQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEI 564
G A +F M P+ VT +++ F + ++ C + LV +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 565 SVSNILIDSYAKSGNLMYSRRIFDGL----PLKDIISWNIML 602
N LI Y ++G L ++++F+ + DI+++NI+L
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 115/230 (50%), Gaps = 17/230 (7%)
Query: 386 MSLVDDVLTGNSLIDMYSKCGDLEAAQ----RIFDMMYERDVYSWNTIIGGYCHAGFCGK 441
+ + D+ + LI + +C L A ++ + + + + +++ G+C +
Sbjct: 108 LGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 167
Query: 442 AYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLI 501
A L M PNVV +N +I G ++ + AL++F +EK G I+ + ++N+LI
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG-IRADAVTYNTLI 226
Query: 502 AGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAF---ANLVAGKKV-KEIHCCALR 557
+G SG+ A ++ R M +I PN + +++ F NL+ + + KE+ +R
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM----IR 282
Query: 558 RNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLK----DIISWNIMLS 603
R++V + N LI+ + G L ++ +FD + K D++++N +++
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 198/456 (43%), Gaps = 51/456 (11%)
Query: 67 LSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNVNPFVETKL 126
+ +A ++ + + ++ T L + ++ + +E R + GN++ +
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Query: 127 VSMYSKCGHLSEARKVF---DEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFL 183
+ Y + G+LSEA +VF E+ +R + ++ MI A KS E+ +LF M+ +G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 184 PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKL 243
PD+ ++Q GR G S ++++ + K G++ A+++
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 244 FKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
+K M E D V + +I F G+++QA Y +AM+E G+ V +N LI Y +
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 300 LGRCDIAVDLMRK-MESFGLT--PDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPN 356
+G D A + RK ++S T PDVYT + MI+ ++++ A + M G E N
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EAN 716
Query: 357 SITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFD 416
T ++ MY K G E A +I
Sbjct: 717 EFTFAM-----------------------------------MLCMYKKNGRFEEATQIAK 741
Query: 417 MMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSG 472
M E D S+N+++G + G +A E F +M S P+ T+ +L T M+ G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 473 AEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSG 508
+A+ + I K +IKR + W S ++ + G
Sbjct: 802 MSKKAVRKIEEIRKK-EIKRGLELWISTLSSLVGIG 836
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 203/474 (42%), Gaps = 41/474 (8%)
Query: 135 HLSEARKVFDEMR-----ERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLL 189
H A ++F+ + E N+ ++ M+ + W V L+ +M+R G P
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 190 PKILQACGKCGDLETGRLIHSVA-----IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
++ K G +H++ + GM ++ +Y K E A++ F
Sbjct: 226 GTLIDVYSK-----GGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFF 280
Query: 245 K--SMDER--------DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILI 294
K S DE S T+N +I + ++G I++A + F M EEG+ P VT+N +I
Sbjct: 281 KKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI 340
Query: 295 ASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVE 354
Y G+ LM+ M+ PD T++ +IS T+ A ++M G++
Sbjct: 341 HIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLK 399
Query: 355 PNSITVXXXXXXXXXXXXXXXXXEIHGIGVKM---SLVDDVLTGNSLIDMYSKCGDLEAA 411
P+ ++ E G+ +M ++ D T ++L MY + LE +
Sbjct: 400 PDPVSY---RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKS 456
Query: 412 QRIFDMMY-----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALIT 466
F + + YS N I Y G+ +A +F+ Q+ + V+ +N +I
Sbjct: 457 WSWFKRFHVAGNMSSEGYSAN--IDAYGERGYLSEAERVFICCQEVNK-RTVIEYNVMIK 513
Query: 467 GYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIA 526
Y S + ++A +LF+ + G + + ++N+L+ + K +M+
Sbjct: 514 AYGISKSCEKACELFESMMSYG-VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYV 572
Query: 527 PNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNL 580
+ + +++ +F L +E++ + N+ ++ V +LI+++A +GN+
Sbjct: 573 SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 116/546 (21%), Positives = 218/546 (39%), Gaps = 86/546 (15%)
Query: 42 SMSIRSLPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDC 101
+M + P + + ++ N + A A + + G K P++Y LL + R
Sbjct: 358 TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 102 IEVGRELHARIGLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGA 160
+E L A + ++ + ++ L MY V EM E+ +WS
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMY-----------VEAEMLEK---SWS----- 458
Query: 161 CSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSS 220
W + + +M G+ + + A G+ G L + +
Sbjct: 459 ------WFKRFHVAGNMSSEGYSAN-------IDAYGERGYLSEAERVFICCQEVNKRTV 505
Query: 221 IRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFD 276
I N I A Y A +LF+SM D T+N ++ + R Y +
Sbjct: 506 IEYNVMIKA-YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
M+E G + + +I+S+ +LG+ ++A ++ ++M + + PDV + +I+ F G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
A+ + M +G+ NS+ N
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIY-----------------------------------N 649
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYER-------DVYSWNTIIGGYCHAGFCGKAYELFMKM 449
SLI +Y+K G L+ A+ I+ + + DVY+ N +I Y KA +F M
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 450 QDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQ 509
+ N T+ ++ Y ++G ++A + K++ ++ KI + S+NS++ F G+
Sbjct: 710 KQR-GEANEFTFAMMLCMYKKNGRFEEATQIAKQM-REMKILTDPLSYNSVLGLFALDGR 767
Query: 510 KDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL----VAGKKVKEIHCCALRRNLVSEIS 565
+A++ F+ M I P+ T S+ L A +K++EI ++R L IS
Sbjct: 768 FKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWIS 827
Query: 566 VSNILI 571
+ L+
Sbjct: 828 TLSSLV 833
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 153/370 (41%), Gaps = 43/370 (11%)
Query: 192 ILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER- 250
++ GK G ++ + G+ + N+++ +Y G++G L K+M
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC 363
Query: 251 --DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVD 308
D+ T+N +I+ +N DIE+A YF M+++G++P V++ L+ +++ + A
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 309 LMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG---------------- 352
L+ +M+ + D YT S++ + + + ++ ++G
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGE 483
Query: 353 ----VEPNSITVXXXXXXXXXXXXXXXXXEIHGIG-------------VKMSLVDDVLTG 395
E + + + +GI + + D T
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 396 NSLIDMYSKCGDLEAAQRIF-----DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N+L+ + + D+ R + + Y D + +I + G A E++ +M
Sbjct: 544 NTLVQILAS-ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
+ + P+VV + LI + +G QA+ + +++ G I N +NSLI + + G
Sbjct: 603 EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG-IPGNSVIYNSLIKLYTKVGYL 661
Query: 511 DKAMQIFRRM 520
D+A I+R++
Sbjct: 662 DEAEAIYRKL 671
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 46/390 (11%)
Query: 136 LSEARKVFDEMRERNLFTWSAMIGACS-REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQ 194
+S A VF + + F ++ +I C+ E S F +M R PD P + +
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 195 ACG--KCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDS 252
AC K GDL + +H A+R G+ S + N+++ VY+ + A +LF +RD
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRD- 182
Query: 253 VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRK 312
+VT+N+LI + A +++R
Sbjct: 183 ----------------------------------VVTYNVLIDGLVK------AREIVRA 202
Query: 313 MESFGLTP--DVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
E F P D+ +W+S+ISG+ Q A+ L +M+ G++P+++ +
Sbjct: 203 RELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQS 262
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTII 430
IH + L D L+D Y+KCG ++ A IF++ ++ +++WN +I
Sbjct: 263 GDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMI 322
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
G G + F KM S P+ VT+ +++ G SG D+A +LF ++ +
Sbjct: 323 TGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDV 382
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRM 520
R + + + ++G ++A ++ +M
Sbjct: 383 NREMKHYGCMADLLGRAGLIEEAAEMIEQM 412
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L+ K + AR++FD M R+L +W+++I ++ E + LF +MV G PD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFK 245
+ L AC + GD + G+ IH R + + ++ YAKCG + A ++F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 246 SMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDI 305
++ TWNA+ITG +G+ E YF M G++P VT+ ++ + G D
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 306 AVDLMRKMES-FGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSG 352
A +L +M S + + ++ + M + G A +++ +M G
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 40/225 (17%)
Query: 379 IHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
+H ++ L+ D+ T N+LI +YS +++A ++FD +RDV
Sbjct: 139 LHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV--------------- 183
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
VT+N LI G +++ +A +LF D R++ SWN
Sbjct: 184 --------------------VTYNVLIDGLVKAREIVRARELF-----DSMPLRDLVSWN 218
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR 558
SLI+G+ Q +A+++F M + P++V ++S L A A +K K IH R+
Sbjct: 219 SLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRK 278
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
L + ++ L+D YAK G + + IF+ K + +WN M++
Sbjct: 279 RLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 69 DAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELH---ARIGLVGNVNPFVETK 125
+A+ + D + G K + ++ L +C + G+ +H R L ++ F+ T
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF--IDSFLATG 289
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
LV Y+KCG + A ++F+ ++ LFTW+AMI + + E VD F MV G PD
Sbjct: 290 LVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPD 349
Query: 186 EFLLPKILQACGKCGDLETGR-LIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+L C G ++ R L + + + ++ + + + G + A ++
Sbjct: 350 GVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMI 409
Query: 245 KSM-----DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQ 299
+ M + + W+ ++ G +G+IE A K + ++ E G V + +++ Y
Sbjct: 410 EQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV-YKVMVEMYAN 468
Query: 300 LGR 302
R
Sbjct: 469 AER 471
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 179/369 (48%), Gaps = 14/369 (3%)
Query: 164 EKSWEEVVDLF-YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
++SW+ +++F + +RH P+ ++ IL G+ I + A + ++
Sbjct: 168 QESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRA-EPTVGDRVQ 226
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQ--ARKYFD 276
V N++M VY++ G+ A++L +M +R D +++N +I ++G + A + D
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 277 AMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKG 336
++ G+ P +T+N L+++ ++ D AV + ME+ PD++T+++MIS + + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 337 RTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGN 396
A L ++ L G P+++T E++ KM D +T N
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 397 SLIDMYSKCGDLEAAQRIFDMM-----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQD 451
++I MY K G L+ A +++ M D ++ +I A +A L +M D
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 452 SDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKD 511
P + T++ALI GY ++G ++A D F + + G N+A ++ ++ L+ +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA-YSVMLDVLLRGNETR 525
Query: 512 KAMQIFRRM 520
KA ++R M
Sbjct: 526 KAWGLYRDM 534
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDL---F 174
V ++ +YS+ G S+A+++ D MR+R +L +++ +I A R KS +L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA--RLKSGGLTPNLAVEL 284
Query: 175 YDMVRH-GFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAK 233
DMVR+ G PD +L AC + +L+ + H + N++++VY +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 234 CGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
CG A++LF ++ + D+VT+N+++ F + + E+ ++ + MQ+ G +T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESF-GLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
+N +I Y + G+ D+A+ L + M+ G PD T++ +I + RT A L+ +M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 349 LLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDL 408
L G++P + T ++LI Y+K G
Sbjct: 465 LDVGIKPT-----------------------------------LQTYSALICGYAKAGKR 489
Query: 409 EAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNAL 464
E A+ F M D +++ ++ KA+ L+ M P+ + +
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 465 ITGYMQSGAEDQALDLFKRIEK 486
I G M+ D + +E+
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEE 571
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 188/447 (42%), Gaps = 28/447 (6%)
Query: 55 DAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCI--EVGRELHARI 112
+A + +G S A ++D++ ++G I++ L+ + + + + EL +
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 113 GLVG-NVNPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSW 167
G + L+S S+ +L A KVF++M + +L+T++AMI R
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 168 EEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSI 227
E LF ++ GF PD +L A + + E + ++ + G N+I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 228 MAVYAKCGEMGFAKKLFKSMD-----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
+ +Y K G++ A +L+K M D++T+ +I + +A M + G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
++P L T++ LI Y + G+ + A D M G PD +S M+ + T A
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 343 DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLIDM 401
L R M+ G P+ E ++ ++ D + L G + +++
Sbjct: 529 GLYRDMISDGHTPS--------YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEI 580
Query: 402 YS-----KCGDLEAAQRIFDMM--YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
S +C DL A Q + YE + + +I+G Y +G +A+EL +++ S
Sbjct: 581 SSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHAS 640
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLF 481
+ ALI + + ALD +
Sbjct: 641 GSKRLITEALIVLHCKVNNLSAALDEY 667
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 169/391 (43%), Gaps = 49/391 (12%)
Query: 213 IRHGMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER--DSV-TWNAIITGFCQNGDIE 269
+RH + R+ +I+ V + + A ++F + D V +NA++ + ++G
Sbjct: 183 LRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFS 242
Query: 270 QARKYFDAMQEEGVEPGLVTWNILIASYNQLG--RCDIAVDLMRKMESFGLTPDVYTWSS 327
+A++ DAM++ G P L+++N LI + + G ++AV+L+ + + GL PD T+++
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNT 302
Query: 328 MISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMS 387
++S ++ A+ + M +P
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQP-------------------------------- 330
Query: 388 LVDDVLTGNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAY 443
D+ T N++I +Y +CG A+R+F + + D ++N+++ + K
Sbjct: 331 ---DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 444 ELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAG 503
E++ +MQ + +T+N +I Y + G D AL L+K ++ + ++ LI
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 504 FLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRR----- 558
++ + +A + M I P T +++ +A ++ ++ C LR
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 559 NLVSEISVSNILIDSYAKSGNLMYSRRIFDG 589
NL + + +L + + +Y I DG
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 171/403 (42%), Gaps = 22/403 (5%)
Query: 154 WSAMIGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAI 213
+ ++ C + + E +F D+ G E + ++ K G ET + + A
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 214 RHGM---CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNG 266
G CS + + I+ Y K A+ + ++ + D TWN++++ + Q G
Sbjct: 744 TKGFHFACSPMYTD--IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 267 DIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWS 326
E+AR F+ M +G P + + NIL+ + GR + ++ +++ G +
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSIL 861
Query: 327 SMISGFTQKGRTYHALDLLRKMLLSGVEPN----SITVXXXXXXXXXXXXXXXXXEIHGI 382
M+ F + G + + M +G P + + E+
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 383 GVKMSLVDDVLTGNSLIDMYSKCGD----LEAAQRIFDMMYERDVYSWNTIIGGYCHAGF 438
K+ L NS++ MY+ D ++ QRI + E D ++NT+I YC
Sbjct: 922 NFKVELA----IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 439 CGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWN 498
+ Y L +M++ P + T+ +LI+ + + +QA LF+ + G +K + + ++
Sbjct: 978 PEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYH 1036
Query: 499 SLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFAN 541
+++ SG KA ++ + M+ I P T+ ++ ++++
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 168/394 (42%), Gaps = 19/394 (4%)
Query: 114 LVGNV-----NPFVET--KLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACS 162
+VGN+ P ++T L+S Y++CG AR +F+ M + + + ++ A
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC 833
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ EE+ + ++ GF + + +L A + G++ + I+S G +IR
Sbjct: 834 VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAM 278
+ ++ + K + A+ + M+E + WN+++ + D ++ + + +
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
+E G+EP T+N LI Y + R + LM++M + GL P + T+ S+IS F ++
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
A L ++L G++ + ++ + + + T + L
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 399 IDMYSKCGDLEAAQRIF----DMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
+ YS G+ + A+++ D E ++++I Y + E ++M+
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDG 488
P+ W + S + + + L K +E G
Sbjct: 1134 EPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 169/417 (40%), Gaps = 48/417 (11%)
Query: 124 TKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
T ++ Y K +A V +R+ +L TW++++ A ++ +E +F M+R
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G P + +L A G LE ++ G S ++ +A+ G +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 240 AKKLFKSMDERDSVT----WNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
KK++ SM + + +I C+ + A M+E + L WN ++
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEP 355
Y + V + ++++ GL PD T++++I + + R L+++M G++P
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 356 NSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIF 415
T SLI + K LE A+++F
Sbjct: 996 KLDTY-----------------------------------KSLISAFGKQKCLEQAEQLF 1020
Query: 416 DMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQS 471
+ + + D ++T++ +G KA +L M+++ P + T + L+ Y S
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS 1080
Query: 472 GAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPN 528
G +A + + KD +++ ++S+I +L+S + ++ M+ + P+
Sbjct: 1081 GNPQEAEKVLSNL-KDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 164/391 (41%), Gaps = 34/391 (8%)
Query: 213 IRHGMCSSIRVNNSIM-AVYAKCGEMGFAKKLFKSMDERDSVTWNAIITGFCQNGDIEQA 271
I H CS+ +N + + G + A K+F M E++ V W ++I G+ N D+ A
Sbjct: 19 ITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSA 78
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKM------------ESFGLT 319
R+YFD E + V WN +I+ Y ++G A L +M E +
Sbjct: 79 RRYFDLSPERDI----VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANI 134
Query: 320 PD---------------VYTWSSMISGFTQKGRTYHALDLLRKMLLSG-VEPNSITVXXX 363
D V++W+ +I G+ Q GR L ++M+ G V PN T+
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLV 194
Query: 364 XXXXXXXXXXXXXXEIHGIGVKMSLVD-DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERD 422
+H G + DV N+LIDMY KCG +E A +F + RD
Sbjct: 195 LSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRD 254
Query: 423 VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK 482
+ SWNT+I G G +A LF +M++S P+ VT+ ++ G + L F
Sbjct: 255 LISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFN 314
Query: 483 RIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANL 542
+ D I + ++ ++G +A++ +M A T+L + +
Sbjct: 315 SMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKV 374
Query: 543 VAGKKVKEIHCCALRRNLVSEISVSNILIDS 573
G+ E RN + + +SNI D+
Sbjct: 375 DIGEVALEELIKLEPRNPANFVMLSNIYGDA 405
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 391 DVLTGNSLIDMYSKCGDLEAAQRIFDMMYERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
+V+ S+I+ Y DL +A+R FD+ ERD+ WNT+I GY G +A LF +M
Sbjct: 58 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
D V++WN ++ GY G + +F D +RNV SWN LI G+ Q+G+
Sbjct: 118 CRD----VMSWNTVLEGYANIGDMEACERVF-----DDMPERNVFSWNGLIKGYAQNGRV 168
Query: 511 DKAMQIFRRM-QFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA--LRRNLVSEISVS 567
+ + F+RM + PN T+ +L A A L A K +H L N V +++V
Sbjct: 169 SEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKV-DVNVK 227
Query: 568 NILIDSYAKSGNLMYSRRIFDGLPLKDIISWNIMLS 603
N LID Y K G + + +F G+ +D+ISWN M++
Sbjct: 228 NALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 130 YSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHG-FLPDEFL 188
Y+ G + +VFD+M ERN+F+W+ +I ++ EV+ F MV G +P++
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 189 LPKILQACGKCGDLETGRLIHSVAIRHGMCS-SIRVNNSIMAVYAKCGEMGFAKKLFKSM 247
+ +L AC K G + G+ +H G + V N+++ +Y KCG + A ++FK +
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 248 DERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAV 307
RD ++WN +I G +G +A F M+ G+ P VT+ ++ + +G + +
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Query: 308 DLMRKM-ESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKM 348
M F + P++ ++ ++ G A++ + KM
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 181/446 (40%), Gaps = 59/446 (13%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRHGFLPD 185
L M G ++ A KVF EM E+N+ W++MI K DL P+
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNK------DLVSARRYFDLSPE 87
Query: 186 EFLLPKILQACGKCGDLETGRLIHSVAIRHGM-CSSIRVNNSIMAVYAKCGEMGFAKKLF 244
+ +L G +E G ++ + ++ M C + N+++ YA G+M +++F
Sbjct: 88 RDI---VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 245 KSMDERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG-VEPGLVTWNILIASYNQLGRC 303
M ER+ +WN +I G+ QNG + + F M +EG V P T +++++ +LG
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 304 DIAVDLMRKMESFGLTP--------------------------------DVYTWSSMISG 331
D + + E+ G D+ +W++MI+G
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSIT-VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVD 390
G AL+L +M SG+ P+ +T V + + S++
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 391 DVLTGNSLIDMYSKCGDL-EAAQRIFDMMYERDVYSWNTIIGG---YCHAGFCGKAYELF 446
++ ++D+ S+ G L +A + I M + D W T++G Y A E
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 447 MKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASW---NSLIAG 503
+K++ P N + L Y +G D A L + G K SW + +
Sbjct: 385 IKLE----PRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 504 FLQSGQK----DKAMQIFRRMQFFQI 525
F SG+K ++ +I R ++ F I
Sbjct: 441 FYSSGEKHPRTEELQRILRELKSFNI 466
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 64 NGPLSDAVAILDSLAEQGSKVRPITYMNL-LQSCIDRDCIEVGRELHARIGLVG--NVNP 120
NG +S+ + + ++GS V M L L +C + G+ +H +G V+
Sbjct: 165 NGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDV 224
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRERNLFTWSAMIGACSREKSWEEVVDLFYDMVRH 180
V+ L+ MY KCG + A +VF ++ R+L +W+ MI + E ++LF++M
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 181 GFLPDEFLLPKILQACGKCGDLETG-RLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G PD+ +L AC G +E G +S+ + I ++ + ++ G +
Sbjct: 285 GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQ 344
Query: 240 AKKLFKSMDER-DSVTWNAII 259
A + M + D+V W ++
Sbjct: 345 AVEFINKMPVKADAVIWATLL 365
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 204/440 (46%), Gaps = 16/440 (3%)
Query: 119 NPFVETKLVSMYSKCGHLSEARKVFDEMR----ERNLFTWSAMIGACSREKSWEEVVDLF 174
N + T ++S+ + G L + +VFDEM R++F+++A+I A R +E ++L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 175 YDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH-GMCSSIRVNNSIMAVYAK 233
M P ++ AC + G G L +RH G+ I N++++ A
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 234 CGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVT 289
G A+ +F++M++ D T++ ++ F + +E+ M G P + +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 290 WNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+N+L+ +Y + G A+ + +M++ G TP+ T+S +++ F Q GR L +M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 350 LSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLE 409
S +P++ T + V+ ++ D+ T +I K G E
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 410 AAQRIFDMMYERDVY----SWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALI 465
A++I M D+ ++ +I + A +A F M + S P++ T+++L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 466 TGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQI 525
+ + G ++ + R+ G I RN ++N+ I + Q G+ ++A++ + M+ +
Sbjct: 500 YSFARGGLVKESEAILSRLVDSG-IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 526 APNSVTVLSILP--AFANLV 543
P+ T+ ++L +FA LV
Sbjct: 559 DPDERTLEAVLSVYSFARLV 578
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 171/399 (42%), Gaps = 16/399 (4%)
Query: 101 CIEVGRELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSA 156
C+EV E+ ++ G+ +V F T L++ Y + G + ++ D M+ ++ T++
Sbjct: 160 CLEVFDEMPSQ-GVSRSV--FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 157 MIGACSREK-SWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRH 215
+I AC+R WE ++ LF +M G PD +L AC G + ++
Sbjct: 217 VINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG 276
Query: 216 GMCSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDE----RDSVTWNAIITGFCQNGDIEQA 271
G+ + + ++ + K + L M D ++N ++ + ++G I++A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 272 RKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISG 331
F MQ G P T+++L+ + Q GR D L +M+S PD T++ +I
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 332 FTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDD 391
F + G + L M+ +EP+ T +I +V
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 392 VLTGNSLIDMYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFM 447
+I+ + + E A F+ M+E + ++++++ + G ++ +
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 448 KMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEK 486
++ DS P N T+NA I Y Q G ++A+ + +EK
Sbjct: 517 RLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 170/380 (44%), Gaps = 46/380 (12%)
Query: 227 IMAVYAKCGEMGFAKKLFKSMDER-----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE 281
+ +A G+ + +LFK M + + + +I+ + G +++ + FD M +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 282 GVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHA 341
GV + ++ LI +Y + GR + +++L+ +M++ ++P + T++++I+ + G +
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 342 L-DLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLID 400
L L +M G++P D++T N+L+
Sbjct: 231 LLGLFAEMRHEGIQP-----------------------------------DIVTYNTLLS 255
Query: 401 MYSKCGDLEAAQRIFDMMYE----RDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPP 456
+ G + A+ +F M + D+ +++ ++ + K +L +M S P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 457 NVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQI 516
++ ++N L+ Y +SG+ +A+ +F +++ G N +++ L+ F QSG+ D Q+
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 517 FRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAK 576
F M+ P++ T ++ F K+V + + N+ ++ +I + K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 577 SGNLMYSRRIFDGLPLKDII 596
G +R+I + DI+
Sbjct: 435 GGLHEDARKILQYMTANDIV 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 183/450 (40%), Gaps = 28/450 (6%)
Query: 56 AQLNQLCSNGPLSDAVAILDSLAEQGSKVRP--ITYMNLLQSCIDRDCIEVGRELHARIG 113
A +N NG ++ +LD + + K+ P +TY ++ + C G + +G
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNE--KISPSILTYNTVINA-----CARGGLDWEGLLG 233
Query: 114 LVGN-----VNPFVET--KLVSMYSKCGHLSEARKVFDEMRE----RNLFTWSAMIGACS 162
L + P + T L+S + G EA VF M + +L T+S ++
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 163 REKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIR 222
+ + E+V DL +M G LPD +L+A K G ++ + G +
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 223 VNNSIMAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
+ ++ ++ + G ++LF M + D+ T+N +I F + G ++ F M
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
EE +EP + T+ +I + + G + A +++ M + + P ++ +I F Q
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
AL M G P+ T I V + + T N+
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 399 IDMYSKCGDLEAAQRIF-DMMYER---DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
I+ Y + G E A + + DM R D + ++ Y A + E F +M+ SD
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRI 484
P+++ + ++ Y ++ D +L + +
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 64/338 (18%)
Query: 58 LNQLCSNGPLSDAVA---ILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGL 114
L ++ S G L D + +L++ A+ GS + + +Q+ G
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA----------------GC 348
Query: 115 VGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEV 170
N N + + L++++ + G + R++F EM+ N T++ +I ++EV
Sbjct: 349 TPNANTY--SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 171 VDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAV 230
V LF+DMV PD I+ ACGK G E R I + + S + ++
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 231 YAKCGEMGFAKKLFKSMDE---------------------------------------RD 251
+ + A F +M E R+
Sbjct: 467 FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Query: 252 SVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
T+NA I + Q G E+A K + M++ +P T +++ Y+ D +
Sbjct: 527 RDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFE 586
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKML 349
+M++ + P + + M++ + + R +LL +ML
Sbjct: 587 EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 237/549 (43%), Gaps = 38/549 (6%)
Query: 61 LCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGNV-N 119
LC + + A + D + E+G K T+ L++ + G EL + G + N
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 120 PFVETKLVSMYSKCGHLSEARKVFDEMRERNL----FTWSAMIGACSREKSWEEVVDLFY 175
+ +VS + + G ++ K+ ++MRE L T+++ I A +E + +F
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 176 DMVRHGFL----PDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVY 231
DM +L P+ +L+ K G LE + + + +S++ N +
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 232 AKCGEMGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGL 287
+ G+ A+ + K M ++ ++N ++ G C+ G + A+ M+ GV P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 288 VTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRK 347
VT+ L+ Y +G+ D A L+++M P+ YT + ++ + GR A +LLRK
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 348 MLLSGVEPNSITVXXXXXXXXXXXXXXXXXEI-HGIGVKMSLVDDVLTGNSLIDMYSKCG 406
M G +++T EI G+ V S L GNS I +
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL-GNSYIGL----- 510
Query: 407 DLEAAQRIFDMMYER----DVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWN 462
+ D + E D+ +++T++ G C AG +A LF +M P+ V +N
Sbjct: 511 -------VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 463 ALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQF 522
I + + G A + K +EK G +++ ++NSLI G Q + + M+
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKG-CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 523 FQIAPNSVTVLSILPAFANLVAGKKVKEIHCC---ALRRNLVSEISVSNILIDSYAKSGN 579
I+PN T + A L G+KV++ +++N+ + LI+++ K +
Sbjct: 623 KGISPNICTYNT---AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 580 LMYSRRIFD 588
++ +F+
Sbjct: 680 FDMAQEVFE 688
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 203/483 (42%), Gaps = 89/483 (18%)
Query: 126 LVSMYSKCGHLSEARKVFDEMRER------NLFTWSAMIGACSREKSWEEVVDLFYDMVR 179
+VS+++K H+ +A F +R R +++ ++ ++ +C +E+ E V L+ DMV
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 180 HGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGEMGF 239
G P + +++A +C S V+
Sbjct: 141 CGIAPQTYTFNLLIRA---------------------LCDSSCVDA-------------- 165
Query: 240 AKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIA 295
A++LF M E+ + T+ ++ G+C+ G ++ + +AM+ GV P V +N +++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 296 SYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGV-- 353
S+ + GR D + ++ KM GL PD+ T++S IS ++G+ A + M L
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 354 --EPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
PNSIT N ++ + K G LE A
Sbjct: 286 LPRPNSITY-----------------------------------NLMLKGFCKVGLLEDA 310
Query: 412 QRIFDMMYERD----VYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
+ +F+ + E D + S+N + G G +A + +M D P++ ++N L+ G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
+ G A + ++++G + + ++ L+ G+ G+ D A + + M P
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNG-VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 528 NSVTVLSILPAFANLVAGKKVKEIHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIF 587
N+ T +L + + + +E+ + + NI++D SG L + I
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 588 DGL 590
G+
Sbjct: 490 KGM 492
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 186/476 (39%), Gaps = 42/476 (8%)
Query: 48 LPYPKFMDAQLNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQS-CIDRDCIEVGR 106
LP + ++ C G D+ +++ + E+G +T+ + + + C + ++ R
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 107 -----ELHARIGLVGNVNPFVETKLVSMYSKCGHLSEARKVFDEMRERN----LFTWSAM 157
EL +GL N ++ + K G L +A+ +F+ +RE + L +++
Sbjct: 274 IFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 158 IGACSREKSWEEVVDLFYDMVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGM 217
+ R + E + M G P + ++ K G L + I + R+G+
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 218 CSSIRVNNSIMAVYAKCGEMGFAKKLFKSMDERD----SVTWNAIITGFCQNGDIEQARK 273
C ++ Y G++ AK L + M + + T N ++ + G I +A +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 274 YFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFG---------------- 317
M E+G VT NI++ G D A+++++ M G
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 318 -------LTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXX 370
PD+ T+S++++G + GR A +L +M+ ++P+S+
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 371 XXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER----DVYSW 426
+ K + T NSLI + + D M E+ ++ ++
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 427 NTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFK 482
NT I C A L +M + PNV ++ LI + + D A ++F+
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 397 SLIDMYSKCGDLEAAQRIFDMMYER------DVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
S++ +++K ++ A F ++ R VY +N ++ L+ M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
P T+N LI S D A +LF + + G K N ++ L+ G+ ++G
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCKAGLT 198
Query: 511 DKAMQIFRRMQFFQIAPNSVTVLSILPAFA----NLVAGKKVKEIHCCALRRNLVSEISV 566
DK +++ M+ F + PN V +I+ +F N + K V+++ LV +I
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR----EEGLVPDIVT 254
Query: 567 SNILIDSYAKSGNLMYSRRIFD--------GLPLKDIISWNIML 602
N I + K G ++ + RIF GLP + I++N+ML
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 158/321 (49%), Gaps = 46/321 (14%)
Query: 220 SIRVNNSIMAVYAKCGEMGFAKKLFKSMDERDSV----TWNAIITGFCQNGDIEQARKYF 275
+IR N+++ + + + + LF + T+N +I C+ + E+AR +
Sbjct: 113 AIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172
Query: 276 DAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQK 335
D M +EG +P + +++ +I + G+ D A++L +M G+ PDV ++ +I GF ++
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 336 GRTYHALDLLRKMLL-SGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLT 394
A++L ++L S V PN V T
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPN-----------------------------------VKT 257
Query: 395 GNSLIDMYSKCGDLEAAQRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQ 450
N +I SKCG ++ +I++ M E+D+Y+++++I G C AG KA +F ++
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 451 DSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQK 510
+ + +VVT+N ++ G+ + G ++L+L++ +E + N+ S+N LI G L++G+
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKI 375
Query: 511 DKAMQIFRRMQFFQIAPNSVT 531
D+A I+R M A + T
Sbjct: 376 DEATMIWRLMPAKGYAADKTT 396
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 224/536 (41%), Gaps = 93/536 (17%)
Query: 121 FVETKLVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVVDLFYD 176
F + +++ +K G L +A ++FDEM ER ++ ++ +I +EK + ++L+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW-- 242
Query: 177 MVRHGFLPDEFLLPKI---------LQACGKCGDL------------ETGRLIHSVAIRH 215
L D + P + L CG+ D E +S I H
Sbjct: 243 ---DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI-H 298
Query: 216 GMCSSIRVN---------------------NSIMAVYAKCGEMGFAKKLFKSMDERDS-- 252
G+C + V+ N+++ + +CG++ + +L++ M+ ++S
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN 358
Query: 253 -VTWNAIITGFCQNGDIEQARKYFDAMQEEGVEPGLVTWNILIASYNQLGRCDIAVDLMR 311
V++N +I G +NG I++A + M +G T+ I I G + A+ +M+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 312 KMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLSGVEPNSITVXXXXXXXXXXX 371
++ES G DVY ++S+I +K R A +L+++M GVE N
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN--------------- 463
Query: 372 XXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAAQRIFDMMYER-DVYSWNTII 430
S V + L G + D S+ G+ R R V S+N +I
Sbjct: 464 ---------------SHVCNALIGGLIRD--SRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 431 GGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKI 490
G C AG G+A +M ++ P++ T++ L+ G + D AL+L+ + + G +
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG-L 565
Query: 491 KRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKE 550
+ +V N LI G G+ D AM + M+ N VT +++ F + +
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 551 IHCCALRRNLVSEISVSNILIDSYAKSGNLMYSRRIFDGLP----LKDIISWNIML 602
I + L +I N ++ + Y+ FD + +WNI++
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 201/491 (40%), Gaps = 83/491 (16%)
Query: 58 LNQLCSNGPLSDAVAILDSLAEQGSKVRPITYMNLLQSCIDRDCIEVGRELHARIGLVGN 117
+N L G L DA+ + D ++E+G Y L+ + + EL R+ +
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 118 VNPFVETK--LVSMYSKCGHLSEARKVFDEM----RERNLFTWSAMI-GAC--------- 161
V P V+T ++S SKCG + + K+++ M RE++L+T+S++I G C
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 162 -------SREKSWEEVV--DLFYDMVRHGFLPDEFLLPKILQACGKC----------GDL 202
R+ S + V + R G + + L +I++ G L
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLL 370
Query: 203 ETGRLIHSVAIR-------------------HGMCSSIRVNNSI------------MAVY 231
E G++ + I HG+C + VN ++ + VY
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 232 A---------KCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAM 278
A K + A L K M E +S NA+I G ++ + +A + M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 279 QEEGVEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRT 338
+ G P +V++NILI + G+ A +++M G PD+ T+S ++ G + +
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 339 YHALDLLRKMLLSGVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
AL+L + L SG+E + + + + +++T N+L
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 399 IDMYSKCGDLEAAQRIFDMMY----ERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
++ + K GD A I+ MY + D+ S+NTI+ G C A E F ++
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 455 PPNVVTWNALI 465
P V TWN L+
Sbjct: 671 FPTVYTWNILV 681
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 226/515 (43%), Gaps = 43/515 (8%)
Query: 118 VNPFVETK--LVSMYSKCGHLSEARKVFDEMRER----NLFTWSAMIGACSREKSWEEVV 171
V P ++T L+ M K +AR D M + ++F++S +I ++ ++ +
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 172 DLFYDMVRHGFLPDEFLLPKILQACGKCGDLETG-----RLIHSVAIRHGMCSSIRVNNS 226
+LF +M G PD ++ K D +T RL+ ++ +++ +N
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY----PNVKTHNI 260
Query: 227 IMAVYAKCGEMGFAKKLFKSMD----ERDSVTWNAIITGFCQNGDIEQARKYFDAMQEEG 282
+++ +KCG + K+++ M E+D T++++I G C G++++A F+ + E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 283 VEPGLVTWNILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHAL 342
+VT+N ++ + + G+ +++L R ME + ++ +++ +I G + G+ A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEAT 379
Query: 343 DLLRKMLLSGVEPNSIT----VXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSL 398
+ R M G + T + E+ G + DV S+
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL----DVYAYASI 435
Query: 399 IDMYSKCGDLEAAQRIFDMMYERDV----YSWNTIIGGYCHAGFCGKAYELFMKMQDSDS 454
ID K LE A + M + V + N +IGG G+A +M +
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 455 PPNVVTWNALITGYMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAM 514
P VV++N LI G ++G +A K + ++G K ++ +++ L+ G + + D A+
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENG-WKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 515 QIFRRMQFFQIAPNSVTVLSILPAFANLVAGKKVKEIHCCA--LRRNLVSEISVSNILID 572
+++ QF Q + ++ + GK + A RN + + N L++
Sbjct: 555 ELWH--QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 573 SYAKSGNLMYSRRIFD-----GLPLKDIISWNIML 602
+ K G+ + I+ GL DIIS+N ++
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQ-PDIISYNTIM 646
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 179/424 (42%), Gaps = 16/424 (3%)
Query: 122 VETKLVSMYSKCGHLSEARKVFDEMRE-----RNLFTWSAMIGACSREKSWEEVVDLFYD 176
V ++ Y K +A VF MRE + +++ ++ A K W +V LF
Sbjct: 80 VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAY 139
Query: 177 MVRHGFLPDEFLLPKILQACGKCGDLETGRLIHSVAIRHGMCSSIRVNNSIMAVYAKCGE 236
G P+ +++ K + E R + G + ++++ AK G+
Sbjct: 140 FETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 237 MGFAKKLFKSMDER----DSVTWNAIITGFCQNGDIEQARKYFDAMQEE-GVEPGLVTWN 291
+ A +LF M ER D +N +I GF + D + A + +D + E+ V P + T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 292 ILIASYNQLGRCDIAVDLMRKMESFGLTPDVYTWSSMISGFTQKGRTYHALDLLRKMLLS 351
I+I+ ++ GR D + + +M+ D+YT+SS+I G G A + ++
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 352 GVEPNSITVXXXXXXXXXXXXXXXXXEIHGIGVKMSLVDDVLTGNSLIDMYSKCGDLEAA 411
+ +T E+ I + V ++++ N LI + G ++ A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEA 378
Query: 412 QRIFDMM----YERDVYSWNTIIGGYCHAGFCGKAYELFMKMQDSDSPPNVVTWNALITG 467
I+ +M Y D ++ I G C G+ KA + +++ S +V + ++I
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 468 YMQSGAEDQALDLFKRIEKDGKIKRNVASWNSLIAGFLQSGQKDKAMQIFRRMQFFQIAP 527
+ ++A +L K + K G ++ N N+LI G ++ + +A R M P
Sbjct: 439 LCKKKRLEEASNLVKEMSKHG-VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 528 NSVT 531
V+
Sbjct: 498 TVVS 501