Miyakogusa Predicted Gene
- Lj2g3v2277520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2277520.1 tr|Q76EX8|Q76EX8_SOYBN Microsomal omega-3 fatty
acid desaturase OS=Glycine max GN=Fan PE=2 SV=1,80.71,0,seg,NULL;
FA_desaturase,Fatty acid desaturase, type 1; DUF3474,Protein of
unknown function DUF3474; ,CUFF.38784.1
(431 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 | chr5:166... 535 e-152
AT3G11170.1 | Symbols: FAD7, FADD | fatty acid desaturase 7 | ch... 530 e-151
AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 | chr2:127... 525 e-149
AT5G05580.2 | Symbols: FAD8 | fatty acid desaturase 8 | chr5:166... 459 e-129
AT2G29980.2 | Symbols: FAD3 | fatty acid desaturase 3 | chr2:127... 367 e-101
AT3G12120.2 | Symbols: FAD2 | fatty acid desaturase 2 | chr3:386... 211 9e-55
AT3G12120.1 | Symbols: FAD2 | fatty acid desaturase 2 | chr3:386... 211 9e-55
AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase ... 102 6e-22
>AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 |
chr5:1664331-1666345 FORWARD LENGTH=435
Length = 435
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 245/350 (70%), Positives = 281/350 (80%)
Query: 77 FDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHFDSWFFWPLY 136
FDP APPPF +A+IRAAIPKHCWVKNPW S+SYV+RD +F++W WPLY
Sbjct: 81 FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLY 140
Query: 137 WILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTHHQNHG 196
W QGTMFWALFVLGHDCGHGSFS+ P LNS+ GH+LHSSILVP+HGWRISHRTHHQNHG
Sbjct: 141 WFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHG 200
Query: 197 HVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKEGSHFNPYSNLF 256
HVE DESW PL E IYK+L+ T+ RFT+PFPM YP YLW RSPGK+GSH++P S+LF
Sbjct: 201 HVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLF 260
Query: 257 TPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDFVTYLHHHGY 316
P E+K+V ST CW M MLK+YG+PY IFVMWLDFVTYLHHHG+
Sbjct: 261 LPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGH 320
Query: 317 KQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQMPHYHLVEATQAA 376
+ KLPWYRGKEWSYLRGGLTT+DRDYGW+NNIHHDIGTHVIHHLFPQ+PHYHLVEAT+AA
Sbjct: 321 EDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAA 380
Query: 377 KPVLGEYYREPEKSAPIPFHLIKYLILSFRVDHFVSDTGDIVYYQHDPHL 426
KPVLG+YYREP+ S P+P HL+ LI S + DHFVSDTGD+VYY+ DP L
Sbjct: 381 KPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKL 430
>AT3G11170.1 | Symbols: FAD7, FADD | fatty acid desaturase 7 |
chr3:3499959-3502126 FORWARD LENGTH=446
Length = 446
Score = 530 bits (1365), Expect = e-151, Method: Compositional matrix adjust.
Identities = 243/355 (68%), Positives = 285/355 (80%)
Query: 77 FDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHFDSWFFWPLY 136
FDP APPPF +A+IRAAIPKHCWVKNPW+SLSYV+RD + ++W WPLY
Sbjct: 88 FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLY 147
Query: 137 WILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTHHQNHG 196
W+ QGTMFWALFVLGHDCGHGSFS+ P LNS+VGH+LHSSILVP+HGWRISHRTHHQNHG
Sbjct: 148 WLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 207
Query: 197 HVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKEGSHFNPYSNLF 256
HVE DESW P++EKIY +LD TRF RFT+P M YP YLW RSPGK+GSH++P S+LF
Sbjct: 208 HVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLF 267
Query: 257 TPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDFVTYLHHHGY 316
P ERK+V ST CW M MLK+YG+PY I VMWLDFVTYLHHHG+
Sbjct: 268 LPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGH 327
Query: 317 KQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQMPHYHLVEATQAA 376
+ KLPWYRGKEWSYLRGGLTT+DRDYG +NNIHHDIGTHVIHHLFPQ+PHYHLVEAT+AA
Sbjct: 328 EDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAA 387
Query: 377 KPVLGEYYREPEKSAPIPFHLIKYLILSFRVDHFVSDTGDIVYYQHDPHLYHKTE 431
KPVLG+YYREP+KS P+P HL++ L S + DH+VSD G++VYY+ DP+LY + +
Sbjct: 388 KPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442
>AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 |
chr2:12781787-12784946 REVERSE LENGTH=386
Length = 386
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/351 (70%), Positives = 281/351 (80%)
Query: 77 FDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHFDSWFFWPLY 136
FDPSA PPFKI +IRAAIPKHCWVK+P RS+SYV+RD + DSWF WPLY
Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLY 85
Query: 137 WILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTHHQNHG 196
W QGT+FWA+FVLGHDCGHGSFSD P LNS+VGHILHS ILVP+HGWRISHRTHHQNHG
Sbjct: 86 WAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHG 145
Query: 197 HVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKEGSHFNPYSNLF 256
HVE DESWVPL E++YK L TR +R+TVP PM YP+YL RSPGKEGSHFNPYS+LF
Sbjct: 146 HVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLF 205
Query: 257 TPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDFVTYLHHHGY 316
PSERK +A ST CW IM +LKVYGVPY+IFVMWLD VTYLHHHG+
Sbjct: 206 APSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGH 265
Query: 317 KQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQMPHYHLVEATQAA 376
+KLPWYRGKEWSYLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQ+PHYHLV+AT+AA
Sbjct: 266 DEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAA 325
Query: 377 KPVLGEYYREPEKSAPIPFHLIKYLILSFRVDHFVSDTGDIVYYQHDPHLY 427
K VLG YYREP+ S IP HL++ L+ S + DH+VSDTGDIV+Y+ DP LY
Sbjct: 326 KHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDLY 376
>AT5G05580.2 | Symbols: FAD8 | fatty acid desaturase 8 |
chr5:1664331-1666190 FORWARD LENGTH=382
Length = 382
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 238/298 (79%)
Query: 77 FDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHFDSWFFWPLY 136
FDP APPPF +A+IRAAIPKHCWVKNPW S+SYV+RD +F++W WPLY
Sbjct: 81 FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLY 140
Query: 137 WILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTHHQNHG 196
W QGTMFWALFVLGHDCGHGSFS+ P LNS+ GH+LHSSILVP+HGWRISHRTHHQNHG
Sbjct: 141 WFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHG 200
Query: 197 HVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKEGSHFNPYSNLF 256
HVE DESW PL E IYK+L+ T+ RFT+PFPM YP YLW RSPGK+GSH++P S+LF
Sbjct: 201 HVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLF 260
Query: 257 TPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDFVTYLHHHGY 316
P E+K+V ST CW M MLK+YG+PY IFVMWLDFVTYLHHHG+
Sbjct: 261 LPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGH 320
Query: 317 KQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQMPHYHLVEATQ 374
+ KLPWYRGKEWSYLRGGLTT+DRDYGW+NNIHHDIGTHVIHHLFPQ+PHYHLVEA Q
Sbjct: 321 EDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEAKQ 378
>AT2G29980.2 | Symbols: FAD3 | fatty acid desaturase 3 |
chr2:12782257-12784946 REVERSE LENGTH=288
Length = 288
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/250 (69%), Positives = 194/250 (77%)
Query: 77 FDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHFDSWFFWPLY 136
FDPSA PPFKI +IRAAIPKHCWVK+P RS+SYV+RD + DSWF WPLY
Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLY 85
Query: 137 WILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTHHQNHG 196
W QGT+FWA+FVLGHDCGHGSFSD P LNS+VGHILHS ILVP+HGWRISHRTHHQNHG
Sbjct: 86 WAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHG 145
Query: 197 HVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKEGSHFNPYSNLF 256
HVE DESWVPL E++YK L TR +R+TVP PM YP+YL RSPGKEGSHFNPYS+LF
Sbjct: 146 HVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLF 205
Query: 257 TPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDFVTYLHHHGY 316
PSERK +A ST CW IM +LKVYGVPY+IFVMWLD VTYLHHHG+
Sbjct: 206 APSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGH 265
Query: 317 KQKLPWYRGK 326
+KLPWYRGK
Sbjct: 266 DEKLPWYRGK 275
>AT3G12120.2 | Symbols: FAD2 | fatty acid desaturase 2 |
chr3:3860592-3861743 REVERSE LENGTH=383
Length = 383
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 174/324 (53%), Gaps = 20/324 (6%)
Query: 79 PSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHF-------DSWF 131
P PPF + +++ AIP HC+ ++ RS SY++ D ++ S+
Sbjct: 25 PCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYL 84
Query: 132 FWPLYWILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTH 191
WPLYW QG + ++V+ H+CGH +FSD L+ VG I HS +LVP+ W+ SHR H
Sbjct: 85 AWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144
Query: 192 HQNHGHVEKDESWVPLTEKIYK-----SLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKE- 245
H N G +E+DE +VP + K + L R M TV F + +P+YL G+
Sbjct: 145 HSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPY 203
Query: 246 ---GSHFNPYSNLFTPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFV 302
HF P + ++ ER ++ +S + + M+ +YGVP +I
Sbjct: 204 DGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVN 263
Query: 303 MWLDFVTYLHHHGYKQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDI-GTHVIHHLF 361
+L +TYL H LP Y EW +LRG L TVDRDYG +N + H+I THV HHLF
Sbjct: 264 AFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321
Query: 362 PQMPHYHLVEATQAAKPVLGEYYR 385
MPHY+ +EAT+A KP+LG+YY+
Sbjct: 322 STMPHYNAMEATKAIKPILGDYYQ 345
>AT3G12120.1 | Symbols: FAD2 | fatty acid desaturase 2 |
chr3:3860592-3861743 REVERSE LENGTH=383
Length = 383
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 174/324 (53%), Gaps = 20/324 (6%)
Query: 79 PSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXXHF-------DSWF 131
P PPF + +++ AIP HC+ ++ RS SY++ D ++ S+
Sbjct: 25 PCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYL 84
Query: 132 FWPLYWILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHRTH 191
WPLYW QG + ++V+ H+CGH +FSD L+ VG I HS +LVP+ W+ SHR H
Sbjct: 85 AWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144
Query: 192 HQNHGHVEKDESWVPLTEKIYK-----SLDSLTRFMRFTVPFPMFVYPIYLWTRSPGKE- 245
H N G +E+DE +VP + K + L R M TV F + +P+YL G+
Sbjct: 145 HSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPY 203
Query: 246 ---GSHFNPYSNLFTPSERKEVAISTLCWVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFV 302
HF P + ++ ER ++ +S + + M+ +YGVP +I
Sbjct: 204 DGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVN 263
Query: 303 MWLDFVTYLHHHGYKQKLPWYRGKEWSYLRGGLTTVDRDYGWVNNIHHDI-GTHVIHHLF 361
+L +TYL H LP Y EW +LRG L TVDRDYG +N + H+I THV HHLF
Sbjct: 264 AFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321
Query: 362 PQMPHYHLVEATQAAKPVLGEYYR 385
MPHY+ +EAT+A KP+LG+YY+
Sbjct: 322 STMPHYNAMEATKAIKPILGDYYQ 345
>AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase 6 |
chr4:15057278-15059673 REVERSE LENGTH=448
Length = 448
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 130 WFFWPLYWILQGTMFWALFVLGHDCGHGSFSDSPTLNSLVGHILHSSILVPFHGWRISHR 189
W+ PL W GT FV+GHDC H SFS + + +VG + ++ P+ WR H
Sbjct: 149 WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHD 208
Query: 190 THHQNHGHVEKDESWVPLTEKIYKSLDSLTRFMRFTVPFPMFVY-PIYLWTRSPGKEGSH 248
HH + D +W P+ + ++S + MR + +F Y PI W H
Sbjct: 209 RHHAKTNMLVHDTAWQPVPPEEFES----SPVMRKAI---IFGYGPIRPWLSIAHWVNWH 261
Query: 249 FNPYSNLFTPSERKEVAISTLC-WVIMXXXXXXXXXXXXXXXMLKVYGVPYMIFVMWLDF 307
FN F SE V IS C + M +K + +P++ + W+
Sbjct: 262 FN--LKKFRASEVNRVKISLACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMST 319
Query: 308 VTYLHHHGYKQKLPWYRGKEWSYLRGGLT-TVDRDY-GWVNNIHHDIGTHVIHHLFPQMP 365
T +HH +P+ EW+ + L TV DY W+ + HDI H+ HH+ P++P
Sbjct: 320 FTMVHHTA--PHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIP 377
Query: 366 HYHLVEATQAAKPVLGEY 383
Y+L A ++ + G+Y
Sbjct: 378 SYNLRAAHESIQENWGKY 395