Miyakogusa Predicted Gene

Lj2g3v2256380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2256380.1 tr|E1ZFM4|E1ZFM4_CHLVA Expressed protein
OS=Chlorella variabilis GN=CHLNCDRAFT_57943 PE=4
SV=1,25.59,0.00000000006,seg,NULL; FAMILY NOT NAMED,NULL;
Hap2_elong,Histone acetylation protein 2,CUFF.38779.1
         (374 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18410.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   333   1e-91
AT2G18410.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   256   2e-68

>AT2G18410.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Histone acetylation protein 2
           (InterPro:IPR019519); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr2:7990768-7992588 FORWARD LENGTH=374
          Length = 374

 Score =  333 bits (854), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 186/365 (50%), Positives = 239/365 (65%), Gaps = 20/365 (5%)

Query: 1   MAESICRTLRDGALEGELAPTLTITDSLTSPLASDVFXXXXXXXXXXXIASKSHSQFRSG 60
           MAESI R LRDG  EGELAP LTI +++ SP   DV            +A KS SQ   G
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQ---G 57

Query: 61  IVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLGWKEKPRKSQNVTNPSHQ 120
           +V++  SR+PS Y  L K KGI +SSS+  WI ILDCYTDPLGW ++   S +  +   +
Sbjct: 58  LVLITFSRSPSFYLQLLKQKGIVVSSSSK-WIRILDCYTDPLGWIDQSSTSFSEGSSLIK 116

Query: 121 VSLATTSYKTVKDLDKLFSVITELGRGLIGENKARFCVAIDSLSELLRHASLQSVAGLLS 180
           +      +K V DL KLFS I E GR L+G  K RFCVAIDS++ELLRH+++  V+GLL+
Sbjct: 117 L------HKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLT 170

Query: 181 NLRSHDQISSIFGLLHSDLHEERAAAVLEYMSSMVASVAPLHHSA--ERGNLENSLS-EQ 237
           +LRSH QISS+F  L++DLH+E+    LEY+S+M A++ PL  S+  +R  LEN  S  Q
Sbjct: 171 DLRSHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQ 230

Query: 238 NFTKGRLNVRFKRRNGRVRVTCEEFKVEAGGISLTSVSSADGATVA--GLLPKVQFNLQL 295
           +F KGR +VRFK R GRVRV  EE+ V+  GI+ + +SS D    A   LLPKVQFNLQL
Sbjct: 231 DFGKGRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQL 290

Query: 296 SEKEKTDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEM-----GE 350
           SEKE+ ++ KVVLPFEHQ  G+  +IYDGRRSL D   E  P+SS + +   +     GE
Sbjct: 291 SEKERVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGE 350

Query: 351 IIYFR 355
           IIYFR
Sbjct: 351 IIYFR 355


>AT2G18410.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; Has
           35333 Blast hits to 34131 proteins in 2444 species:
           Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
           991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
           (source: NCBI BLink). | chr2:7990768-7992203 FORWARD
           LENGTH=306
          Length = 306

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/296 (48%), Positives = 190/296 (64%), Gaps = 15/296 (5%)

Query: 1   MAESICRTLRDGALEGELAPTLTITDSLTSPLASDVFXXXXXXXXXXXIASKSHSQFRSG 60
           MAESI R LRDG  EGELAP LTI +++ SP   DV            +A KS SQ   G
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQ---G 57

Query: 61  IVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLGWKEKPRKSQNVTNPSHQ 120
           +V++  SR+PS Y  L K KGI +SSS+  WI ILDCYTDPLGW ++   S +  +   +
Sbjct: 58  LVLITFSRSPSFYLQLLKQKGIVVSSSSK-WIRILDCYTDPLGWIDQSSTSFSEGSSLIK 116

Query: 121 VSLATTSYKTVKDLDKLFSVITELGRGLIGENKARFCVAIDSLSELLRHASLQSVAGLLS 180
           +      +K V DL KLFS I E GR L+G  K RFCVAIDS++ELLRH+++  V+GLL+
Sbjct: 117 L------HKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLT 170

Query: 181 NLRSHDQISSIFGLLHSDLHEERAAAVLEYMSSMVASVAPLHHSA--ERGNLENSLS-EQ 237
           +LRSH QISS+F  L++DLH+E+    LEY+S+M A++ PL  S+  +R  LEN  S  Q
Sbjct: 171 DLRSHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQ 230

Query: 238 NFTKGRLNVRFKRRNGRVRVTCEEFKVEAGGISLTSVSSADGATVA--GLLPKVQF 291
           +F KGR +VRFK R GRVRV  EE+ V+  GI+ + +SS D    A   LLPK  +
Sbjct: 231 DFGKGRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKASY 286