Miyakogusa Predicted Gene
- Lj2g3v2256320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2256320.1 Non Chatacterized Hit- tr|I1JHC6|I1JHC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25141
PE,95.05,0,Na_Ca_ex,Sodium/calcium exchanger membrane region; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.38772.1
(117 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38170.2 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |... 149 5e-37
AT2G38170.3 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |... 147 1e-36
AT2G38170.1 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |... 147 2e-36
AT3G51860.1 | Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation ... 145 5e-36
AT5G01490.1 | Symbols: CAX4, ATCAX4 | cation exchanger 4 | chr5:... 112 5e-26
AT1G55730.2 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1:... 96 3e-21
AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1:... 96 3e-21
AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 | chr3:... 96 5e-21
AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 | chr1:... 96 6e-21
>AT2G38170.2 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |
chr2:15990574-15993178 REVERSE LENGTH=392
Length = 392
Score = 149 bits (375), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 85/108 (78%), Gaps = 6/108 (5%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDAQXXXXX------XXKAVIGFWSAFTWLVGMTLVISLLS 54
ML++Y+AY+ FQL THR+LFDAQ AVI FWS F WLVGMTLVI+LLS
Sbjct: 244 MLISYIAYLVFQLWTHRQLFDAQEQEDEYDDDVEQETAVISFWSGFAWLVGMTLVIALLS 303
Query: 55 EYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLV 102
EYVV TIE ASD W +SVSFISIILLPIVGNAAEHAG++IFAFKNKLV
Sbjct: 304 EYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLV 351
>AT2G38170.3 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |
chr2:15990113-15993178 REVERSE LENGTH=475
Length = 475
Score = 147 bits (371), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 84/107 (78%), Gaps = 6/107 (5%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDAQXXX------XXXXKAVIGFWSAFTWLVGMTLVISLLS 54
ML++Y+AY+ FQL THR+LFDAQ AVI FWS F WLVGMTLVI+LLS
Sbjct: 244 MLISYIAYLVFQLWTHRQLFDAQEQEDEYDDDVEQETAVISFWSGFAWLVGMTLVIALLS 303
Query: 55 EYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
EYVV TIE ASD W +SVSFISIILLPIVGNAAEHAG++IFAFKNKL
Sbjct: 304 EYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKL 350
>AT2G38170.1 | Symbols: CAX1, ATCAX1, RCI4 | cation exchanger 1 |
chr2:15989429-15993178 REVERSE LENGTH=463
Length = 463
Score = 147 bits (370), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 84/107 (78%), Gaps = 6/107 (5%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDAQXXX------XXXXKAVIGFWSAFTWLVGMTLVISLLS 54
ML++Y+AY+ FQL THR+LFDAQ AVI FWS F WLVGMTLVI+LLS
Sbjct: 244 MLISYIAYLVFQLWTHRQLFDAQEQEDEYDDDVEQETAVISFWSGFAWLVGMTLVIALLS 303
Query: 55 EYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
EYVV TIE ASD W +SVSFISIILLPIVGNAAEHAG++IFAFKNKL
Sbjct: 304 EYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKL 350
>AT3G51860.1 | Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation
exchanger 3 | chr3:19239458-19242519 FORWARD LENGTH=459
Length = 459
Score = 145 bits (366), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 86/109 (78%), Gaps = 8/109 (7%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDAQX--------XXXXXXKAVIGFWSAFTWLVGMTLVISL 52
ML+AY+AY+ FQL THR+LF+AQ VIGFWS F WLVGMT+VI+L
Sbjct: 244 MLIAYIAYLIFQLWTHRQLFEAQQDDDDAYDDEVSVEETPVIGFWSGFAWLVGMTIVIAL 303
Query: 53 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
LSEYVV TIE ASDSWG+SVSFISIILLPIVGNAAEHAG+IIFAFKNKL
Sbjct: 304 LSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKL 352
>AT5G01490.1 | Symbols: CAX4, ATCAX4 | cation exchanger 4 |
chr5:195589-198465 FORWARD LENGTH=454
Length = 454
Score = 112 bits (280), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 12/113 (10%)
Query: 1 MLLAYVAYIFFQL------------KTHRRLFDAQXXXXXXXKAVIGFWSAFTWLVGMTL 48
ML+AY+A++ F L + D AVIG WSA WL+ MTL
Sbjct: 242 MLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTL 301
Query: 49 VISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
+++LLS+Y+V TI+ A+DSWG+SV FI IILLPIVGNAAEHAG++IFAF+NKL
Sbjct: 302 LVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKL 354
>AT1G55730.2 | Symbols: ATCAX5, CAX5 | cation exchanger 5 |
chr1:20831387-20833941 REVERSE LENGTH=441
Length = 441
Score = 96.3 bits (238), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDA--------QXXXXXXXKAVIGFWSAFTWLVGMTLVISL 52
ML+AY AY+FFQLK+ + + I W A WL +T +SL
Sbjct: 242 MLVAYAAYLFFQLKSQPSSYTPLTEETNQNEETSDDDEDPEISKWEAIIWLSILTAWVSL 301
Query: 53 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
LS Y+V IE AS SW I +SFIS+ILLPIVGNAAEHAG+I+FA K+KL
Sbjct: 302 LSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKL 350
>AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 |
chr1:20831387-20833941 REVERSE LENGTH=441
Length = 441
Score = 96.3 bits (238), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDA--------QXXXXXXXKAVIGFWSAFTWLVGMTLVISL 52
ML+AY AY+FFQLK+ + + I W A WL +T +SL
Sbjct: 242 MLVAYAAYLFFQLKSQPSSYTPLTEETNQNEETSDDDEDPEISKWEAIIWLSILTAWVSL 301
Query: 53 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
LS Y+V IE AS SW I +SFIS+ILLPIVGNAAEHAG+I+FA K+KL
Sbjct: 302 LSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKL 350
>AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 |
chr3:4315418-4317997 FORWARD LENGTH=441
Length = 441
Score = 95.9 bits (237), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 1 MLLAYVAYIFFQLKTHRRLFDA--------QXXXXXXXKAVIGFWSAFTWLVGMTLVISL 52
ML+AY AY+FFQLK+ + + I W A WL +T +SL
Sbjct: 242 MLIAYAAYLFFQLKSQSNSYSPLDEESNQNEETSAEDEDPEISKWEAIIWLSILTAWVSL 301
Query: 53 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
LS Y+V IE AS SW I ++FIS ILLPIVGNAAEHAG+I+FA K+KL
Sbjct: 302 LSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKL 350
>AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 |
chr1:20828118-20830595 REVERSE LENGTH=467
Length = 467
Score = 95.5 bits (236), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 1 MLLAYVAYIFFQLKTHRRLF-----DAQXXXXXXXKAVIGFWSAFTWLVGMTLVISLLSE 55
ML+AY AY+FFQLK+ + + I W A WL T +SLLS
Sbjct: 253 MLVAYAAYLFFQLKSQPSFYTEKTNQNEETSNDDEDPEISKWEAIIWLSIFTAWVSLLSG 312
Query: 56 YVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
Y+V IE S SW I +SFIS+ILLPIVGNAAEHAG+I+FA K+KL
Sbjct: 313 YLVDAIEGTSVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKL 358