Miyakogusa Predicted Gene

Lj2g3v2234090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2234090.1 tr|F6KKF6|F6KKF6_MALDO Transcriptional regulator
superman OS=Malus domestica GN=SUP5a PE=2 SV=1,38.46,1e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no description,Zinc finger
C2H2-type/integrase DNA-,gene.g43153.t1.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:28561...    69   2e-12
AT5G43540.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    64   4e-11
AT3G53820.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    64   6e-11
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |...    62   2e-10
AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    62   3e-10
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin...    60   7e-10
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup...    60   7e-10
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |...    59   2e-09
AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers superfam...    57   6e-09
AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    56   1e-08
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260...    47   8e-06
AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    47   9e-06
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016...    47   1e-05

>AT3G09290.1 | Symbols: TAC1 | telomerase activator1 |
          chr3:2856141-2856659 FORWARD LENGTH=172
          Length = 172

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 3/57 (5%)

Query: 2  SSEVSGEDHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQE 58
          S  +S   H G    +D+    RSY C+FC RGF+NAQALGGHMNIHR+DRAK +Q+
Sbjct: 14 SDSISKNSHQG---VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67


>AT5G43540.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:17496993-17497406 FORWARD LENGTH=137
          Length = 137

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 8/72 (11%)

Query: 26  YDCTFCKRGFTNAQALGGHMNIHRKDRA-KGKQEQTPNPFSS-------IQGKFTNYEQS 77
           Y+CTFCKRGFTNAQALGGHMNIHR+DR  K K +   +   S       +      YEQ 
Sbjct: 35  YECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTHRCFHVASDLGGYEQV 94

Query: 78  YSSMTLPFTSEF 89
            S +    TS +
Sbjct: 95  DSVVLRTTTSNY 106


>AT3G53820.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
          protein | chr3:19938706-19939134 FORWARD LENGTH=142
          Length = 142

 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQ 57
          R Y C FC+RGF+NAQALGGHMNIHRKDRAK +Q
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQ 52


>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
          chr2:15827706-15828620 REVERSE LENGTH=304
          Length = 304

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 35/44 (79%), Gaps = 3/44 (6%)

Query: 17 EDTAGT---KRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQ 57
          +D AG+    RSY C+FC+R F +AQALGGHMN+HR+DRA+ KQ
Sbjct: 27 DDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70


>AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr4:9906918-9907532 FORWARD LENGTH=204
          Length = 204

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 76/175 (43%), Gaps = 22/175 (12%)

Query: 19  TAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQ----GKFTN- 73
           T    RSY C FC+R F +AQALGGHMN+HR+DRA  +  Q     ++ +    G   N 
Sbjct: 39  TTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNS 98

Query: 74  YEQSYSSMTLPFTSEFQN-KPLSH-YSIREPQ----RNRDMYFHPPPTQLAPLHL-CEFQ 126
                 + TL   S   N + LSH Y ++ P      + DM      T   P +L     
Sbjct: 99  CAPPLPTTTLIIQSTASNIEGLSHFYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSML 158

Query: 127 NKKSDQPVHFNQGFWGADLSLQTGSNHVGHNASQVRRGNQKDSEVDLELRLGHDP 181
           N   + P    +   G D S+ +     G +            E+DLELRLGH P
Sbjct: 159 NSPVEVPPRLIEYSTGDDESIGSMKEATGTSV----------DELDLELRLGHHP 203


>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
          fingers superfamily protein | chr3:8242504-8243118
          FORWARD LENGTH=204
          Length = 204

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 31/36 (86%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
          RSY C+FCKR F +AQALGGHMN+HR+DRA+ + +Q
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80


>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
          superfamily protein | chr5:1828426-1829106 REVERSE
          LENGTH=226
          Length = 226

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQG 69
          RSY C+FC R F +AQALGGHMN+HR+DRA+ KQ Q+ +P S+ Q 
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ-QSLSPSSTDQA 97


>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
          chr2:17658150-17658794 FORWARD LENGTH=214
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 10/66 (15%)

Query: 2  SSEVSGEDHHGD------HQNEDTAGT----KRSYDCTFCKRGFTNAQALGGHMNIHRKD 51
          + E  GED +GD      H     AG      ++Y C+FC+R F +AQALGGHMN+HR+D
Sbjct: 15 TQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRD 74

Query: 52 RAKGKQ 57
          RAK +Q
Sbjct: 75 RAKLRQ 80


>AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers
          superfamily protein | chr3:8250579-8251097 FORWARD
          LENGTH=172
          Length = 172

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 3/47 (6%)

Query: 11 HGDHQNEDTAGT---KRSYDCTFCKRGFTNAQALGGHMNIHRKDRAK 54
          H D Q +  +G+   +R+YDC  CKRGFTN QALGGH NIHR++R +
Sbjct: 3  HRDKQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERER 49


>AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr1:25621678-25622412 REVERSE LENGTH=244
          Length = 244

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 23  KRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQGKFTNYEQSYSSMT 82
           +R Y+C +C R F N+QALGGH N H+K+R + K+ Q      +    F+N   +   + 
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQL-QATRNAAANFSNAGSASQFLR 128

Query: 83  LPFTSEFQNKP--LSHYSIREPQRNRDMYF-HPPPTQLAPLHLCEFQN 127
            P  S F   P  LS  ++ +P     MY     P+QL   H C  Q+
Sbjct: 129 NPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQD 176


>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
          chr1:8726009-8726638 REVERSE LENGTH=209
          Length = 209

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 2  SSEVSGEDHHGDHQNEDTAGTK-----RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGK 56
          S+ VS +    D  N+DT  TK     R + C +C+R F ++QALGGH N H+++R   K
Sbjct: 30 SNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 89

Query: 57 Q 57
          +
Sbjct: 90 R 90


>AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:335630-336277 FORWARD LENGTH=215
          Length = 215

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 24  RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           R + CTFCK+ F+ +QALGGH N H+++R+  K+ +
Sbjct: 65  RVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRK 100


>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
           chr1:25016644-25017237 FORWARD LENGTH=197
          Length = 197

 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 17/91 (18%)

Query: 24  RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQGKFTNYEQSYSSMTL 83
           R Y+C +C R F N+QALGGH N H+K+R   K+ Q       +  +      ++   T 
Sbjct: 39  RKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQM------LATRGLPRHHNFHPHTN 92

Query: 84  PFTSEFQNKPLSHYSIREPQRNRDMYFHPPP 114
           P  S F   PL H  + +P        HPPP
Sbjct: 93  PLLSAF--APLPHL-LSQP--------HPPP 112