Miyakogusa Predicted Gene

Lj2g3v2220800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2220800.1 Non Chatacterized Hit- tr|I1MB77|I1MB77_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.98,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; seg,NULL;
RNase_E_G,RNA-binding pr,CUFF.38737.1
         (749 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04270.2 | Symbols: RNEE/G | RNAse E/G-like | chr2:1475753-14...   855   0.0  
AT2G04270.1 | Symbols: RNEE/G | RNAse E/G-like | chr2:1474961-14...   852   0.0  
AT2G04270.5 | Symbols: RNEE/G | RNAse E/G-like | chr2:1474961-14...   852   0.0  
AT2G04270.4 | Symbols: RNEE/G | RNAse E/G-like | chr2:1476506-14...   837   0.0  
AT2G04270.3 | Symbols: RNEE/G | RNAse E/G-like | chr2:1476506-14...   702   0.0  

>AT2G04270.2 | Symbols: RNEE/G | RNAse E/G-like |
           chr2:1475753-1480014 FORWARD LENGTH=871
          Length = 871

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/762 (59%), Positives = 550/762 (72%), Gaps = 38/762 (4%)

Query: 7   KDSHSTTILSENYQPLEEPWLLQSTPSVIXXXXXXXXXXXXXXXXTAKEQVKLVD----- 61
           ++S+ + + S+NYQP+EEPWL+Q + ++                    E     D     
Sbjct: 126 ENSNLSALFSDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDDNENNLNTDEQNHQ 185

Query: 62  -TEKLLPEESSNIISKDPVSTIILINSSICTMQRIAXXXXXXXXXXXXXXXKSNVQCDSV 120
            TE LLP+        + ++T ILINSSICT+QRIA               K+NVQCDSV
Sbjct: 186 LTETLLPD--GGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSV 243

Query: 121 YVGVITKLVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVD---LKGKND 177
           Y+GVITK VPHMGGAFVNIG++R + MDIK  + PFIFPPF   +KK   D   +   ND
Sbjct: 244 YLGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMND 303

Query: 178 HIYSATDISDGTSDIHSEDGCLNAVHNDYDEH-------EGDEDSYISEVLEENVNGSMV 230
            I +  +I   + D  +    L+   ND  E          +++ ++S+ L   VNG++V
Sbjct: 304 -IPAPHEIEHASYDFEAS-SLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVV 361

Query: 231 XXXXXXXXXXXXXGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRV-ASGENKW 289
                          + H+ +E  +S+ S   N SV           + ++V +S +NKW
Sbjct: 362 NHGAVEVG-----SENGHIPMERGHSADSLDSNASV----------AKASKVMSSKDNKW 406

Query: 290 TQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLK 349
            QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVL+ RC +IGVSKKISGVERTRLK
Sbjct: 407 IQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLK 466

Query: 350 VIAKRLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAV 409
           VIAK LQP+GFGLTVRTVAAGHS EELQKDL+GLL TWKNI + AKSAALAADEGVEGA+
Sbjct: 467 VIAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAI 526

Query: 410 PVILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVTNYLQEIAPDLCDRVELYDKKVP 469
           P +LHRAMGQTLSVVQDYFN+ V+KMVVDSPRT++EVT+YLQ++APDLC+RVEL+DK +P
Sbjct: 527 PALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIP 586

Query: 470 LFDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAILEV 529
           LFD ++IE E++ ILSKRVPL+NGGSL+IEQTEALVSIDVNGGHGM G G SQ+KAILEV
Sbjct: 587 LFDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEV 646

Query: 530 NLTAAKQIARELXXXXXXXXXXXXFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRH 589
           NL AA+QIARE+            FIDM DE NKRLVYEEVKKA ERDRS+VKVSELSRH
Sbjct: 647 NLAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRH 706

Query: 590 GLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRFLATMDCKADPGN 649
           GLMEITRKRVRPSVTFMISEPC+CCHATGRVEALET+FSKIEQ+ICR LA M+ + D  N
Sbjct: 707 GLMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLEN 766

Query: 650 PKSWPKFILRVDHHMCEYLTSGRKTRLAILSSSLKVWILLKVARGFTRGAFEVKPFADDK 709
           PKSWP+FILRVD HM  +LT+G++TRLAILSSSLKVWILLKVAR FTRG FEVKPF D+K
Sbjct: 767 PKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEK 826

Query: 710 -VGKNQNQVALSILRSSEARTKKPG-QNLTLVQVKKSKARGK 749
            V + Q+QVA+S+L+ ++A     G + LTL+ +KK K  GK
Sbjct: 827 TVNERQHQVAISLLKKADAIADSSGKKKLTLIPIKKEKTSGK 868


>AT2G04270.1 | Symbols: RNEE/G | RNAse E/G-like |
           chr2:1474961-1480014 FORWARD LENGTH=996
          Length = 996

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/762 (59%), Positives = 550/762 (72%), Gaps = 38/762 (4%)

Query: 7   KDSHSTTILSENYQPLEEPWLLQSTPSVIXXXXXXXXXXXXXXXXTAKEQVKLVD----- 61
           ++S+ + + S+NYQP+EEPWL+Q + ++                    E     D     
Sbjct: 251 ENSNLSALFSDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDDNENNLNTDEQNHQ 310

Query: 62  -TEKLLPEESSNIISKDPVSTIILINSSICTMQRIAXXXXXXXXXXXXXXXKSNVQCDSV 120
            TE LLP+        + ++T ILINSSICT+QRIA               K+NVQCDSV
Sbjct: 311 LTETLLPD--GGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSV 368

Query: 121 YVGVITKLVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVD---LKGKND 177
           Y+GVITK VPHMGGAFVNIG++R + MDIK  + PFIFPPF   +KK   D   +   ND
Sbjct: 369 YLGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMND 428

Query: 178 HIYSATDISDGTSDIHSEDGCLNAVHNDYDEH-------EGDEDSYISEVLEENVNGSMV 230
            I +  +I   + D  +    L+   ND  E          +++ ++S+ L   VNG++V
Sbjct: 429 -IPAPHEIEHASYDFEAS-SLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVV 486

Query: 231 XXXXXXXXXXXXXGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRV-ASGENKW 289
                          + H+ +E  +S+ S   N SV           + ++V +S +NKW
Sbjct: 487 NHGAVEVG-----SENGHIPMERGHSADSLDSNASV----------AKASKVMSSKDNKW 531

Query: 290 TQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLK 349
            QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVL+ RC +IGVSKKISGVERTRLK
Sbjct: 532 IQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLK 591

Query: 350 VIAKRLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAV 409
           VIAK LQP+GFGLTVRTVAAGHS EELQKDL+GLL TWKNI + AKSAALAADEGVEGA+
Sbjct: 592 VIAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAI 651

Query: 410 PVILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVTNYLQEIAPDLCDRVELYDKKVP 469
           P +LHRAMGQTLSVVQDYFN+ V+KMVVDSPRT++EVT+YLQ++APDLC+RVEL+DK +P
Sbjct: 652 PALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIP 711

Query: 470 LFDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAILEV 529
           LFD ++IE E++ ILSKRVPL+NGGSL+IEQTEALVSIDVNGGHGM G G SQ+KAILEV
Sbjct: 712 LFDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEV 771

Query: 530 NLTAAKQIARELXXXXXXXXXXXXFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRH 589
           NL AA+QIARE+            FIDM DE NKRLVYEEVKKA ERDRS+VKVSELSRH
Sbjct: 772 NLAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRH 831

Query: 590 GLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRFLATMDCKADPGN 649
           GLMEITRKRVRPSVTFMISEPC+CCHATGRVEALET+FSKIEQ+ICR LA M+ + D  N
Sbjct: 832 GLMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLEN 891

Query: 650 PKSWPKFILRVDHHMCEYLTSGRKTRLAILSSSLKVWILLKVARGFTRGAFEVKPFADDK 709
           PKSWP+FILRVD HM  +LT+G++TRLAILSSSLKVWILLKVAR FTRG FEVKPF D+K
Sbjct: 892 PKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEK 951

Query: 710 -VGKNQNQVALSILRSSEARTKKPG-QNLTLVQVKKSKARGK 749
            V + Q+QVA+S+L+ ++A     G + LTL+ +KK K  GK
Sbjct: 952 TVNERQHQVAISLLKKADAIADSSGKKKLTLIPIKKEKTSGK 993


>AT2G04270.5 | Symbols: RNEE/G | RNAse E/G-like |
           chr2:1474961-1480014 FORWARD LENGTH=1001
          Length = 1001

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/762 (59%), Positives = 550/762 (72%), Gaps = 38/762 (4%)

Query: 7   KDSHSTTILSENYQPLEEPWLLQSTPSVIXXXXXXXXXXXXXXXXTAKEQVKLVD----- 61
           ++S+ + + S+NYQP+EEPWL+Q + ++                    E     D     
Sbjct: 256 ENSNLSALFSDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDDNENNLNTDEQNHQ 315

Query: 62  -TEKLLPEESSNIISKDPVSTIILINSSICTMQRIAXXXXXXXXXXXXXXXKSNVQCDSV 120
            TE LLP+        + ++T ILINSSICT+QRIA               K+NVQCDSV
Sbjct: 316 LTETLLPD--GGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSV 373

Query: 121 YVGVITKLVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVD---LKGKND 177
           Y+GVITK VPHMGGAFVNIG++R + MDIK  + PFIFPPF   +KK   D   +   ND
Sbjct: 374 YLGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMND 433

Query: 178 HIYSATDISDGTSDIHSEDGCLNAVHNDYDEH-------EGDEDSYISEVLEENVNGSMV 230
            I +  +I   + D  +    L+   ND  E          +++ ++S+ L   VNG++V
Sbjct: 434 -IPAPHEIEHASYDFEAS-SLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVV 491

Query: 231 XXXXXXXXXXXXXGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRV-ASGENKW 289
                          + H+ +E  +S+ S   N SV           + ++V +S +NKW
Sbjct: 492 NHGAVEVG-----SENGHIPMERGHSADSLDSNASV----------AKASKVMSSKDNKW 536

Query: 290 TQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLK 349
            QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVL+ RC +IGVSKKISGVERTRLK
Sbjct: 537 IQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLK 596

Query: 350 VIAKRLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAV 409
           VIAK LQP+GFGLTVRTVAAGHS EELQKDL+GLL TWKNI + AKSAALAADEGVEGA+
Sbjct: 597 VIAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAI 656

Query: 410 PVILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVTNYLQEIAPDLCDRVELYDKKVP 469
           P +LHRAMGQTLSVVQDYFN+ V+KMVVDSPRT++EVT+YLQ++APDLC+RVEL+DK +P
Sbjct: 657 PALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIP 716

Query: 470 LFDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAILEV 529
           LFD ++IE E++ ILSKRVPL+NGGSL+IEQTEALVSIDVNGGHGM G G SQ+KAILEV
Sbjct: 717 LFDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEV 776

Query: 530 NLTAAKQIARELXXXXXXXXXXXXFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRH 589
           NL AA+QIARE+            FIDM DE NKRLVYEEVKKA ERDRS+VKVSELSRH
Sbjct: 777 NLAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRH 836

Query: 590 GLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRFLATMDCKADPGN 649
           GLMEITRKRVRPSVTFMISEPC+CCHATGRVEALET+FSKIEQ+ICR LA M+ + D  N
Sbjct: 837 GLMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLEN 896

Query: 650 PKSWPKFILRVDHHMCEYLTSGRKTRLAILSSSLKVWILLKVARGFTRGAFEVKPFADDK 709
           PKSWP+FILRVD HM  +LT+G++TRLAILSSSLKVWILLKVAR FTRG FEVKPF D+K
Sbjct: 897 PKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEK 956

Query: 710 -VGKNQNQVALSILRSSEARTKKPG-QNLTLVQVKKSKARGK 749
            V + Q+QVA+S+L+ ++A     G + LTL+ +KK K  GK
Sbjct: 957 TVNERQHQVAISLLKKADAIADSSGKKKLTLIPIKKEKTSGK 998


>AT2G04270.4 | Symbols: RNEE/G | RNAse E/G-like |
           chr2:1476506-1480014 FORWARD LENGTH=713
          Length = 713

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/701 (62%), Positives = 525/701 (74%), Gaps = 32/701 (4%)

Query: 62  TEKLLPEESSNIISKDPVSTIILINSSICTMQRIAXXXXXXXXXXXXXXXKSNVQCDSVY 121
           TE LLP+        + ++T ILINSSICT+QRIA               K+NVQCDSVY
Sbjct: 29  TETLLPD--GGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSVY 86

Query: 122 VGVITKLVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVD---LKGKNDH 178
           +GVITK VPHMGGAFVNIG++R + MDIK  + PFIFPPF   +KK   D   +   ND 
Sbjct: 87  LGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMND- 145

Query: 179 IYSATDISDGTSDIHSEDGCLNAVHNDYDEH-------EGDEDSYISEVLEENVNGSMVX 231
           I +  +I   + D  +    L+   ND  E          +++ ++S+ L   VNG++V 
Sbjct: 146 IPAPHEIEHASYDFEAS-SLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVVN 204

Query: 232 XXXXXXXXXXXXGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRV-ASGENKWT 290
                         + H+ +E  +S+ S   N SV           + ++V +S +NKW 
Sbjct: 205 HGAVEVG-----SENGHIPMERGHSADSLDSNASV----------AKASKVMSSKDNKWI 249

Query: 291 QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLKV 350
           QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVL+ RC +IGVSKKISGVERTRLKV
Sbjct: 250 QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLKV 309

Query: 351 IAKRLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAVP 410
           IAK LQP+GFGLTVRTVAAGHS EELQKDL+GLL TWKNI + AKSAALAADEGVEGA+P
Sbjct: 310 IAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIP 369

Query: 411 VILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVTNYLQEIAPDLCDRVELYDKKVPL 470
            +LHRAMGQTLSVVQDYFN+ V+KMVVDSPRT++EVT+YLQ++APDLC+RVEL+DK +PL
Sbjct: 370 ALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPL 429

Query: 471 FDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAILEVN 530
           FD ++IE E++ ILSKRVPL+NGGSL+IEQTEALVSIDVNGGHGM G G SQ+KAILEVN
Sbjct: 430 FDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVN 489

Query: 531 LTAAKQIARELXXXXXXXXXXXXFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRHG 590
           L AA+QIARE+            FIDM DE NKRLVYEEVKKA ERDRS+VKVSELSRHG
Sbjct: 490 LAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRHG 549

Query: 591 LMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRFLATMDCKADPGNP 650
           LMEITRKRVRPSVTFMISEPC+CCHATGRVEALET+FSKIEQ+ICR LA M+ + D  NP
Sbjct: 550 LMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLENP 609

Query: 651 KSWPKFILRVDHHMCEYLTSGRKTRLAILSSSLKVWILLKVARGFTRGAFEVKPFADDK- 709
           KSWP+FILRVD HM  +LT+G++TRLAILSSSLKVWILLKVAR FTRG FEVKPF D+K 
Sbjct: 610 KSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEKT 669

Query: 710 VGKNQNQVALSILRSSEARTKKPG-QNLTLVQVKKSKARGK 749
           V + Q+QVA+S+L+ ++A     G + LTL+ +KK K  GK
Sbjct: 670 VNERQHQVAISLLKKADAIADSSGKKKLTLIPIKKEKTSGK 710


>AT2G04270.3 | Symbols: RNEE/G | RNAse E/G-like |
           chr2:1476506-1479445 FORWARD LENGTH=619
          Length = 619

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/591 (62%), Positives = 440/591 (74%), Gaps = 30/591 (5%)

Query: 62  TEKLLPEESSNIISKDPVSTIILINSSICTMQRIAXXXXXXXXXXXXXXXKSNVQCDSVY 121
           TE LLP+        + ++T ILINSSICT+QRIA               K+NVQCDSVY
Sbjct: 29  TETLLPD--GGFFQSESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSVY 86

Query: 122 VGVITKLVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVD---LKGKNDH 178
           +GVITK VPHMGGAFVNIG++R + MDIK  + PFIFPPF   +KK   D   +   ND 
Sbjct: 87  LGVITKFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMND- 145

Query: 179 IYSATDISDGTSDIHSEDGCLNAVHNDYDEH-------EGDEDSYISEVLEENVNGSMVX 231
           I +  +I   + D  +    L+   ND  E          +++ ++S+ L   VNG++V 
Sbjct: 146 IPAPHEIEHASYDFEAS-SLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVVN 204

Query: 232 XXXXXXXXXXXXGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRV-ASGENKWT 290
                         + H+ +E  +S+ S   N SV           + ++V +S +NKW 
Sbjct: 205 HGAVEVG-----SENGHIPMERGHSADSLDSNASV----------AKASKVMSSKDNKWI 249

Query: 291 QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLKV 350
           QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVL+ RC +IGVSKKISGVERTRLKV
Sbjct: 250 QVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLKV 309

Query: 351 IAKRLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAVP 410
           IAK LQP+GFGLTVRTVAAGHS EELQKDL+GLL TWKNI + AKSAALAADEGVEGA+P
Sbjct: 310 IAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIP 369

Query: 411 VILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVTNYLQEIAPDLCDRVELYDKKVPL 470
            +LHRAMGQTLSVVQDYFN+ V+KMVVDSPRT++EVT+YLQ++APDLC+RVEL+DK +PL
Sbjct: 370 ALLHRAMGQTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPL 429

Query: 471 FDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAILEVN 530
           FD ++IE E++ ILSKRVPL+NGGSL+IEQTEALVSIDVNGGHGM G G SQ+KAILEVN
Sbjct: 430 FDLYEIEEEIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVN 489

Query: 531 LTAAKQIARELXXXXXXXXXXXXFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRHG 590
           L AA+QIARE+            FIDM DE NKRLVYEEVKKA ERDRS+VKVSELSRHG
Sbjct: 490 LAAARQIAREIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRHG 549

Query: 591 LMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRFLATM 641
           LMEITRKRVRPSVTFMISEPC+CCHATGRVEALET+FSKIEQ+ICR L ++
Sbjct: 550 LMEITRKRVRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLVSV 600