Miyakogusa Predicted Gene
- Lj2g3v2219770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2219770.1 Non Chatacterized Hit- tr|B9T1U7|B9T1U7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,77.78,2e-17,UBA-like,UBA-like; DUF1296,Protein of unknown function
DUF1296; APOPTOSIS INHIBITOR 5-RELATED,NULL,CUFF.38736.1
(91 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13222.1 | Symbols: GIP1 | GBF-interacting protein 1 | chr3:4... 70 3e-13
AT3G07660.1 | Symbols: | Kinase-related protein of unknown func... 70 3e-13
AT1G55820.1 | Symbols: | Kinase-related protein of unknown func... 61 2e-10
AT1G29370.1 | Symbols: | Kinase-related protein of unknown func... 57 3e-09
AT1G29350.1 | Symbols: | Kinase-related protein of unknown func... 57 3e-09
AT3G13990.2 | Symbols: | Kinase-related protein of unknown func... 53 4e-08
AT3G13990.1 | Symbols: | Kinase-related protein of unknown func... 53 4e-08
AT4G18150.1 | Symbols: | Kinase-related protein of unknown func... 50 4e-07
>AT3G13222.1 | Symbols: GIP1 | GBF-interacting protein 1 |
chr3:4251287-4254206 REVERSE LENGTH=567
Length = 567
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 4 GGFRASIPNSVKKTIQNIKEITG-NHSDEDIYAMLKECSMDPNETTQKLL 52
GG R SIP + +TIQNI+E+TG HSDEDI+++ KEC DP+ETTQKLL
Sbjct: 8 GGSRVSIPADLLQTIQNIREVTGKQHSDEDIFSVFKECFSDPHETTQKLL 57
>AT3G07660.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr3:2445275-2450372 REVERSE
LENGTH=841
Length = 841
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 1 MSGGGFRASIPNSVKKTIQNIKEIT-GNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
M G G R SI + +K IQNIKE T GN+S+++I AML EC+MDP+ET Q+LLLQ
Sbjct: 1 MVGSGARVSISATTRKMIQNIKETTAGNYSEDEIIAMLHECNMDPDETAQRLLLQ 55
>AT1G55820.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr1:20864397-20867418 FORWARD
LENGTH=575
Length = 575
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 GGGFRASIPNSVKKTIQNIKEITG-NHSDEDIYAMLKECSMDPNETTQKLLL 53
GG R SIP ++KT+Q I+E TG HSDEDI+A+ K+ DP+ET QKLL
Sbjct: 6 GGSSRVSIPYHLRKTLQKIREYTGKQHSDEDIFAVYKDSFNDPHETAQKLLF 57
>AT1G29370.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr1:10278080-10283024 REVERSE
LENGTH=831
Length = 831
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 3 GGGFRA---SIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
GGG R IP+ +K +Q++ EI N + +IYAMLKEC+MDPNET +LL Q
Sbjct: 7 GGGARKGIQDIPSGSRKIVQSLTEIV-NSPEAEIYAMLKECNMDPNETVSRLLSQ 60
>AT1G29350.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr1:10268761-10273613 REVERSE
LENGTH=831
Length = 831
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 3 GGGFRA---SIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
GGG R IP+ +K +Q++ EI N + +IYAMLKEC+MDPNET +LL Q
Sbjct: 7 GGGARKGIQDIPSGSRKIVQSLTEIV-NSPEAEIYAMLKECNMDPNETVSRLLSQ 60
>AT3G13990.2 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr3:4625708-4630383 REVERSE
LENGTH=847
Length = 847
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 2 SGGGFRASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
+ G + + KK IQ+IKE+ +HSD DIY LKE +MD NE +KL+ Q
Sbjct: 7 TSGNRGVGLDDEAKKMIQSIKEVVDSHSDADIYTALKEANMDANEAVEKLIHQ 59
>AT3G13990.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr3:4625708-4630383 REVERSE
LENGTH=848
Length = 848
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 2 SGGGFRASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
+ G + + KK IQ+IKE+ +HSD DIY LKE +MD NE +KL+ Q
Sbjct: 7 TSGNRGVGLDDEAKKMIQSIKEVVDSHSDADIYTALKEANMDANEAVEKLIHQ 59
>AT4G18150.1 | Symbols: | Kinase-related protein of unknown
function (DUF1296) | chr4:10050211-10053790 FORWARD
LENGTH=758
Length = 758
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 1 MSGGGFRAS-----IPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
M GGG S +P S +K IQ++KEI S+ +IYAML EC M+P+E +LL Q
Sbjct: 1 MGGGGGSVSNANGGVPASSRKVIQDLKEIV-ECSELEIYAMLVECDMNPDEAVNRLLSQ 58