Miyakogusa Predicted Gene

Lj2g3v2207710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2207710.1 Non Chatacterized Hit- tr|D5A8X5|D5A8X5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,51.14,2e-18,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; no description,NULL;
HMA,Heav,CUFF.38730.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27590.1 | Symbols:  | Heavy metal transport/detoxification s...   130   5e-31
AT4G27590.2 | Symbols:  | Heavy metal transport/detoxification s...   125   1e-29
AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    58   3e-09
AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    58   3e-09
AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    56   1e-08
AT1G06330.1 | Symbols:  | Heavy metal transport/detoxification s...    56   1e-08
AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    55   2e-08
AT3G56891.1 | Symbols:  | Heavy metal transport/detoxification s...    53   9e-08
AT1G29100.1 | Symbols:  | Heavy metal transport/detoxification s...    50   7e-07
AT4G08570.1 | Symbols:  | Heavy metal transport/detoxification s...    49   1e-06
AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper chape...    49   2e-06

>AT4G27590.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr4:13771224-13771790 FORWARD
           LENGTH=156
          Length = 156

 Score =  130 bits (326), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/157 (48%), Positives = 91/157 (57%), Gaps = 22/157 (14%)

Query: 30  MANMQIVPAYKNIVEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWG 89
           M ++QIVP Y N VEAQYVEMMVPLYSYGCEKKVK++LS LKGIYSV VD+  QKVTVWG
Sbjct: 1   MGDLQIVPVY-NKVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVWG 59

Query: 90  ICNKYDVLETVRSKRKGACFWN------------------QEDNVV---LENXXXXXXXX 128
           ICNK DVL  V+ KRK A FWN                  +ED ++    +         
Sbjct: 60  ICNKLDVLAMVKKKRKEARFWNVEEEENNNPESVDDCIVVKEDTIIKTSFDTDKSSAFYT 119

Query: 129 XXXXXXHKDFKRSLSLTKVRTLSLKAWKKVFARSYSF 165
                     +  +SL +  + + KA KKVF RS SF
Sbjct: 120 YSTTPPRFSIRPPMSLIRTSSFTWKAVKKVFTRSLSF 156


>AT4G27590.2 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr4:13771224-13772594 FORWARD
           LENGTH=332
          Length = 332

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)

Query: 30  MANMQIVPAYKNIVEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWG 89
           M ++QIVP Y N VEAQYVEMMVPLYSYGCEKKVK++LS LKGIYSV VD+  QKVTVWG
Sbjct: 1   MGDLQIVPVY-NKVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVWG 59

Query: 90  ICNKYDVLETVRSKRKGACFW 110
           ICNK DVL  V+ KRK A FW
Sbjct: 60  ICNKLDVLAMVKKKRKEARFW 80


>AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:585713-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 40  KNIVEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLET 99
           KN    Q V + V L+  GC  KVKK LS LKG+ S N+DF  +KVTV G      VL +
Sbjct: 244 KNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLAS 303

Query: 100 VRSKRKGACFWNQ 112
           + SK K A FW +
Sbjct: 304 I-SKVKNAQFWPE 315


>AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:584486-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 40  KNIVEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLET 99
           KN    Q V + V L+  GC  KVKK LS LKG+ S N+DF  +KVTV G      VL +
Sbjct: 244 KNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLAS 303

Query: 100 VRSKRKGACFWNQ 112
           + SK K A FW +
Sbjct: 304 I-SKVKNAQFWPE 315


>AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=259
          Length = 259

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 43  VEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRS 102
            + Q V + V L+  GCE KV+K L+ ++G+ S N+DF  +KVTV G     ++L+++ S
Sbjct: 178 TDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSI-S 236

Query: 103 KRKGACFW 110
           K K A FW
Sbjct: 237 KVKNAQFW 244


>AT1G06330.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr1:1931671-1932266 REVERSE
           LENGTH=159
          Length = 159

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 41  NIVEAQYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETV 100
           N+++ Q +EM V +   GCE +VK +L  ++G+ +V +D  QQKVTV G  ++  VL+ V
Sbjct: 6   NLIQLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKV 65

Query: 101 RSKRKGACFW 110
           R   + A  W
Sbjct: 66  RKTGRRAELW 75


>AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=258
          Length = 258

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 46  QYVEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRSKRK 105
           Q V + V L+  GCE KV+K L+ ++G+ S N+DF  +KVTV G     ++L+++ SK K
Sbjct: 180 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSI-SKVK 238

Query: 106 GACFW 110
            A FW
Sbjct: 239 NAQFW 243


>AT3G56891.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:21064199-21064922 REVERSE
           LENGTH=166
          Length = 166

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 43/63 (68%)

Query: 48  VEMMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRSKRKGA 107
           VE++V +   GCEKKV++++S L G+ +V +D  +QKVTV G  ++ +VL+ V+   + A
Sbjct: 18  VELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTA 77

Query: 108 CFW 110
            +W
Sbjct: 78  EYW 80


>AT1G29100.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr1:10169084-10169619 FORWARD
           LENGTH=141
          Length = 141

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 50  MMVPLYSYGCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRS-KRKGAC 108
           M VP+   GCE KV+K+L  + G++ V +D  QQ+VTV G   +  VL+  R+  ++  C
Sbjct: 1   MEVPMDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKRDIC 60

Query: 109 FW 110
            W
Sbjct: 61  LW 62


>AT4G08570.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr4:5455123-5455975 REVERSE
           LENGTH=150
          Length = 150

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%)

Query: 58  GCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRSKRKGACFW 110
           GCE+K+K  LS +KG+ SV+VD   QKVTV G  +   VLE  +S +K    W
Sbjct: 39  GCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTKKKVELW 91


>AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper
           chaperone protein | chr3:19845199-19846583 FORWARD
           LENGTH=247
          Length = 247

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 3/68 (4%)

Query: 46  QYVEMMVPLYSY--GCEKKVKKSLSPLKGIYSVNVDFCQQKVTVWGICNKYDVLETVRSK 103
           Q V + V L+ +  GC+ KVKK LS ++G+ S N+DF  +KVTV G     +VL  + SK
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCL-SK 226

Query: 104 RKGACFWN 111
            K A FW 
Sbjct: 227 VKNAQFWT 234