Miyakogusa Predicted Gene
- Lj2g3v2197630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2197630.1 Non Chatacterized Hit- tr|C5YIN1|C5YIN1_SORBI
Putative uncharacterized protein Sb07g027350
OS=Sorghu,26.77,8e-18,SUBFAMILY NOT NAMED,NULL; CGI-12
PROTEIN-RELATED,NULL; seg,NULL; Mitochondrial termination factor
re,CUFF.38722.1
(521 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02990.1 | Symbols: | Mitochondrial transcription terminatio... 629 e-180
AT2G44020.1 | Symbols: | Mitochondrial transcription terminatio... 409 e-114
AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription ter... 139 5e-33
AT4G38160.1 | Symbols: pde191 | Mitochondrial transcription term... 132 7e-31
AT4G38160.2 | Symbols: pde191 | Mitochondrial transcription term... 132 8e-31
AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription term... 131 9e-31
AT1G78930.1 | Symbols: | Mitochondrial transcription terminatio... 101 1e-21
AT4G14605.1 | Symbols: | Mitochondrial transcription terminatio... 99 5e-21
AT5G55580.1 | Symbols: | Mitochondrial transcription terminatio... 86 6e-17
AT2G34620.1 | Symbols: | Mitochondrial transcription terminatio... 79 7e-15
AT2G03050.1 | Symbols: EMB93, SOLDAT10 | Mitochondrial transcrip... 71 2e-12
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 68 2e-11
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 68 2e-11
AT3G18870.1 | Symbols: | Mitochondrial transcription terminatio... 65 9e-11
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active... 64 3e-10
AT2G36000.1 | Symbols: | Mitochondrial transcription terminatio... 61 2e-09
AT2G36000.2 | Symbols: | Mitochondrial transcription terminatio... 61 2e-09
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 60 4e-09
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 60 5e-09
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 52 1e-06
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 51 2e-06
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 51 2e-06
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 50 3e-06
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 49 8e-06
>AT4G02990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:1322158-1323783 FORWARD
LENGTH=541
Length = 541
Score = 629 bits (1622), Expect = e-180, Method: Compositional matrix adjust.
Identities = 326/523 (62%), Positives = 392/523 (74%), Gaps = 25/523 (4%)
Query: 1 MSFSGELTKPSFSIGQTEMPILTFGHSKLGATLALRLPCNCFRR--MGLITKLQYSVTNS 58
+ F TKP F + E P S+ + CN +R G+ +Q ++ N
Sbjct: 3 IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62
Query: 59 VLASRTVDSPGSK----------------RDSGPVSRRRGGPSSLYVRPSLSDMKKDKAV 102
+SR++DSP + +D G S+ SLY RPSL DM K+KA
Sbjct: 63 RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSK------SLYSRPSLLDMNKEKAA 116
Query: 103 MREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLVLGCSVK 162
R KVYEFLRGIG+VPDELDGLELPVT DVM+ERV+FLH LGLTIEDINNYPLVLGCSVK
Sbjct: 117 NRAKVYEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVK 176
Query: 163 KNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVL 222
KNM+PVLD+LGKLGVRKSTFT+FL+RYPQ +G+DI+P+D+PRVL
Sbjct: 177 KNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVL 236
Query: 223 ERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLES 282
ERYPE+LGFKLEGTMSTSVAYL+GIGV RRE+GG+LTRYPEILGMRV R+IKP VEYLE
Sbjct: 237 ERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEV 296
Query: 283 LGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLK 342
LGIPRLA ARLIE RP+ILGF LD+ VKPNV+ L++FNVR TSLPS+IAQYP+IIG DLK
Sbjct: 297 LGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLK 356
Query: 343 QKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMI 402
KL QR +L S + L+PED G ++E+MPQ VSLS P+L H+DFL CGFS Q +M+
Sbjct: 357 PKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMV 416
Query: 403 VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLK 462
+GCPQ+LAL++ IMKLSF++F EM RPL+DLV FPAFFTYGLEST+KPRHK + KKG+K
Sbjct: 417 IGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIK 476
Query: 463 CSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEP-SFDMNSLMQP 504
CSL+WMLNCS+EKFEQRM YDTID+EE+E +P SFDMN+LMQP
Sbjct: 477 CSLAWMLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQP 519
>AT2G44020.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:18217737-18219260 REVERSE
LENGTH=507
Length = 507
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 283/402 (70%), Gaps = 2/402 (0%)
Query: 97 KKDKAVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLV 156
KK+K V R K+ ++L+G+G++ DEL+ +ELP T++VM ERV+FL LGLTI+DIN YPL+
Sbjct: 76 KKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINEYPLM 135
Query: 157 LGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPN 216
LGCSV+KN+IPVL +L K+G+ +S +F++ YPQ G+D+
Sbjct: 136 LGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQ 195
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
D+ VL +YPELLGFKLEGTMSTSVAYL+ IGV R++G ++T+YP +LGMRVG +IKP
Sbjct: 196 DLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPL 255
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDI 336
V+YL S+G+P+ VAR++E R YI+G+ L+E VKPNV L F V++ LP +IAQYP I
Sbjct: 256 VDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQI 315
Query: 337 IGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQ 396
+G +K K+ Q+ + L +DPE F R+VEKMPQ+VSL ++ ++FL F +
Sbjct: 316 LGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVE 375
Query: 397 QMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMV 456
+ KM+V CPQ+L + +MK S+ F+ EMGRP+++LV +P +FTY LES IKPR++ +
Sbjct: 376 DIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKL 435
Query: 457 AKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEPSFDM 498
KG++ SL+W LNCS+++FE+R+ + ID + P+FDM
Sbjct: 436 QSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDM 475
>AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription
termination factor family protein | chr2:9270886-9273307
FORWARD LENGTH=641
Length = 641
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 178/357 (49%), Gaps = 6/357 (1%)
Query: 129 TVDVMRERVDFLHSLGLTIEDINNYPLVLGCSV----KKNMIPVLDFLGKLGVRKSTFTQ 184
+D +R +++L S+ + E I L G ++ ++ + ++++L GVR+
Sbjct: 241 NLDSIRIMIEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGY 300
Query: 185 FLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYL 244
+ R P+ + M + ND ++ YP+++GF M + YL
Sbjct: 301 VVGRCPELLSFSMEEVKSRVDFFLK-MGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYL 359
Query: 245 IGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFG 304
G+ E+G +L P ++G + KP V+Y LGIP+ + R++ +P +
Sbjct: 360 KEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCID 419
Query: 305 LDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFG 364
L++ + P V+ L+E + ++ +++ ++P ++ L +K+ L + + +D G
Sbjct: 420 LEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIG 479
Query: 365 RIVEKMPQVVSLSSGPLLM-HVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFF 423
+++ P ++ S G L ++ + G Q+G+MI P LL +++ ++ + +
Sbjct: 480 KVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYL 539
Query: 424 HMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSNEKFEQRM 480
M RPL+DL+ FP FF+Y LE I PRH ++ + + L +ML C++E+FE+R+
Sbjct: 540 RRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRV 596
>AT4G38160.1 | Symbols: pde191 | Mitochondrial transcription
termination factor family protein |
chr4:17902412-17903413 FORWARD LENGTH=333
Length = 333
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 143/276 (51%), Gaps = 3/276 (1%)
Query: 213 IRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRV 272
I+ +P ++ R P++L +L+ + V L +G RE+ +T++P IL V
Sbjct: 54 IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113
Query: 273 IKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSL-PSVIA 331
+ P + + ++LG+P + ++I P ++ + +D K+ V L + + + V+
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173
Query: 332 QYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLM-HVDFLKD 390
+ P ++G + ++L L S + L + +V PQ++ +L + D+LK+
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233
Query: 391 CGFSSQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
CGF Q+ M+ G PQ+L + N ++ F MGR ++++ ++P FF +GL+ +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293
Query: 450 KPRHKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTI 485
+ R K+V K + CSL ML+C+ +KF ++ + +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 131 DVMRERVDFLHSLGLTIED------INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQ 184
DV E D+L ++ + I++ ++ P +L + + +IP+++ L LG
Sbjct: 39 DVASENWDYLSNI-VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVAS 97
Query: 185 FLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYL 244
+ ++P + + + + +++ P L+ + ++ ++ V++L
Sbjct: 98 AITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFL 157
Query: 245 IGIGVGRREL-GGVLTRYPEILGMRVGRVIKPFVEYLE-SLGIPRLAVARLIENRPYILG 302
+G+ + + G VL + P ++G V + ++P E+L+ S+G+ + ++ N P +L
Sbjct: 158 ASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLC 217
Query: 303 FGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
+++ +KPN L+E + + +++ YP I+ +K L
Sbjct: 218 RDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSL 260
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 137 VDFLHSLGLTIED----INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQX 192
V+ L SLG + I +P +L SV++ + P+L F LGV ++ + + P+
Sbjct: 82 VECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRL 141
Query: 193 XXXXXXXXXXXXXXXXEGMDIRPND-IPRVLERYPELLGFKLEGTMSTSVAYL-IGIGVG 250
+ + + I +VL + P L+G+ ++ + + +L +G+
Sbjct: 142 ISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLS 201
Query: 251 RRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVK 310
+ V+ +P++L V +++KP +YL+ G +A ++ P IL + ++
Sbjct: 202 EDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQ 261
Query: 311 PNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
P ++ L + R +A YP+ LK+K+
Sbjct: 262 PRIRFLVQVMGRGM---DEVASYPEFFHHGLKKKV 293
>AT4G38160.2 | Symbols: pde191 | Mitochondrial transcription
termination factor family protein |
chr4:17902412-17903784 FORWARD LENGTH=363
Length = 363
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 143/276 (51%), Gaps = 3/276 (1%)
Query: 213 IRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRV 272
I+ +P ++ R P++L +L+ + V L +G RE+ +T++P IL V
Sbjct: 54 IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113
Query: 273 IKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSL-PSVIA 331
+ P + + ++LG+P + ++I P ++ + +D K+ V L + + + V+
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173
Query: 332 QYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLM-HVDFLKD 390
+ P ++G + ++L L S + L + +V PQ++ +L + D+LK+
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233
Query: 391 CGFSSQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
CGF Q+ M+ G PQ+L + N ++ F MGR ++++ ++P FF +GL+ +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293
Query: 450 KPRHKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTI 485
+ R K+V K + CSL ML+C+ +KF ++ + +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 131 DVMRERVDFLHSLGLTIED------INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQ 184
DV E D+L ++ + I++ ++ P +L + + +IP+++ L LG
Sbjct: 39 DVASENWDYLSNI-VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVAS 97
Query: 185 FLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYL 244
+ ++P + + + + +++ P L+ + ++ ++ V++L
Sbjct: 98 AITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFL 157
Query: 245 IGIGVGRREL-GGVLTRYPEILGMRVGRVIKPFVEYLE-SLGIPRLAVARLIENRPYILG 302
+G+ + + G VL + P ++G V + ++P E+L+ S+G+ + ++ N P +L
Sbjct: 158 ASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLC 217
Query: 303 FGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
+++ +KPN L+E + + +++ YP I+ +K L
Sbjct: 218 RDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSL 260
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 137 VDFLHSLGLTIED----INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQX 192
V+ L SLG + I +P +L SV++ + P+L F LGV ++ + + P+
Sbjct: 82 VECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRL 141
Query: 193 XXXXXXXXXXXXXXXXEGMDIRPND-IPRVLERYPELLGFKLEGTMSTSVAYL-IGIGVG 250
+ + + I +VL + P L+G+ ++ + + +L +G+
Sbjct: 142 ISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLS 201
Query: 251 RRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVK 310
+ V+ +P++L V +++KP +YL+ G +A ++ P IL + ++
Sbjct: 202 EDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQ 261
Query: 311 PNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
P ++ L + R +A YP+ LK+K+
Sbjct: 262 PRIRFLVQVMGRGM---DEVASYPEFFHHGLKKKV 293
>AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription
termination factor family protein |
chr4:17902412-17903904 FORWARD LENGTH=378
Length = 378
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 143/276 (51%), Gaps = 3/276 (1%)
Query: 213 IRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRV 272
I+ +P ++ R P++L +L+ + V L +G RE+ +T++P IL V
Sbjct: 54 IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113
Query: 273 IKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSL-PSVIA 331
+ P + + ++LG+P + ++I P ++ + +D K+ V L + + + V+
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173
Query: 332 QYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLM-HVDFLKD 390
+ P ++G + ++L L S + L + +V PQ++ +L + D+LK+
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233
Query: 391 CGFSSQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
CGF Q+ M+ G PQ+L + N ++ F MGR ++++ ++P FF +GL+ +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293
Query: 450 KPRHKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTI 485
+ R K+V K + CSL ML+C+ +KF ++ + +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 131 DVMRERVDFLHSLGLTIED------INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQ 184
DV E D+L ++ + I++ ++ P +L + + +IP+++ L LG
Sbjct: 39 DVASENWDYLSNI-VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVAS 97
Query: 185 FLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYL 244
+ ++P + + + + +++ P L+ + ++ ++ V++L
Sbjct: 98 AITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFL 157
Query: 245 IGIGVGRREL-GGVLTRYPEILGMRVGRVIKPFVEYLE-SLGIPRLAVARLIENRPYILG 302
+G+ + + G VL + P ++G V + ++P E+L+ S+G+ + ++ N P +L
Sbjct: 158 ASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLC 217
Query: 303 FGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
+++ +KPN L+E + + +++ YP I+ +K L
Sbjct: 218 RDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSL 260
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 137 VDFLHSLGLTIED----INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQX 192
V+ L SLG + I +P +L SV++ + P+L F LGV ++ + + P+
Sbjct: 82 VECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRL 141
Query: 193 XXXXXXXXXXXXXXXXEGMDIRPND-IPRVLERYPELLGFKLEGTMSTSVAYL-IGIGVG 250
+ + + I +VL + P L+G+ ++ + + +L +G+
Sbjct: 142 ISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLS 201
Query: 251 RRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVK 310
+ V+ +P++L V +++KP +YL+ G +A ++ P IL + ++
Sbjct: 202 EDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQ 261
Query: 311 PNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
P ++ L + R +A YP+ LK+K+
Sbjct: 262 PRIRFLVQVMGRGM---DEVASYPEFFHHGLKKKV 293
>AT1G78930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29678285-29680648 REVERSE
LENGTH=591
Length = 591
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 162/329 (49%), Gaps = 5/329 (1%)
Query: 150 INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXE 209
+ ++P +L S + +M P+++FL +G+ K + L YP E
Sbjct: 249 LESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAME 308
Query: 210 GMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRV 269
+ + D ++L +YP +L ++ S ++ V + ++ + R+P +LG
Sbjct: 309 KVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCSA 368
Query: 270 GRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSV 329
++ V+ + LG+ + ++I P +L E +K V LE+ ++ + +
Sbjct: 369 SN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKV-VCFLEDLGFQKEIVGQI 426
Query: 330 IAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQ-VVSLSSGPLLMHVDFL 388
+ + P+I G + +K L ++ + + + F RI++K P+ ++ + +L + +L
Sbjct: 427 LCRCPEIFGCSI-EKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYL 485
Query: 389 KDCGFSSQQMGKMIVGCPQLLALDIN-IMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLES 447
+ G S +++ MI +L I+ +++ F+F M +P+ +++ +P +F+Y LE
Sbjct: 486 MEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEK 545
Query: 448 TIKPRHKMVAKKGLKCSLSWMLNCSNEKF 476
IKPR +++ + ++C+L ML ++E+F
Sbjct: 546 RIKPRFRVLKGRNIECTLQEMLGKNDEEF 574
>AT4G14605.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:8378815-8380564 FORWARD
LENGTH=493
Length = 493
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 135/264 (51%), Gaps = 10/264 (3%)
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
I + ++ + L+G + V +L+ +G+ + ++ +L + P+I G+ + +KP
Sbjct: 212 QIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPT 271
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDI 336
+ +LE+LGI + A++I P IL + +K+ V+ L + + + ++ + P+I
Sbjct: 272 MAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNI 330
Query: 337 IGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHV-DFLKDCGFSS 395
+ ++ KL R + L+ D ++ + PQ LS L V +F + GF
Sbjct: 331 MSYSVEDKL---RPTMEYFRSLN-VDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGL 386
Query: 396 QQMGKMI--VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH 453
++G MI G +L N+M +D+F M P +LV FP FF Y L+ IKPR+
Sbjct: 387 DEIGIMISRYGALYTFSLKENVMP-KWDYFQT-MDYPKSELVKFPQFFGYSLQERIKPRY 444
Query: 454 KMVAKKGLKCSLSWMLNCSNEKFE 477
++V + G++ L+ +L+ S +FE
Sbjct: 445 ELVQRSGVRLLLNQVLSLSGIEFE 468
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 160 SVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIP 219
S+ + PV++FL LG+ KS L + PQ E + I N
Sbjct: 227 SLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWA 286
Query: 220 RVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEY 279
+++ R+P +L + + ST V +L G+ ++G +LTR P I+ V ++P +EY
Sbjct: 287 KIISRFPAILTYSRQKLTST-VEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEY 345
Query: 280 LESLGIPRLAVARLIENRPYILGFGLDEKVKPNVK--------------------SLEEF 319
SL + VA L+ P G ++ +KP + +L F
Sbjct: 346 FRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTF 402
Query: 320 NVRRTSLP------------SVIAQYPDIIGTDLKQKL-----LNQRS----VLNSVLDL 358
+++ +P S + ++P G L++++ L QRS +LN VL L
Sbjct: 403 SLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 462
Query: 359 DPEDF 363
+F
Sbjct: 463 SGIEF 467
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 114/303 (37%), Gaps = 51/303 (16%)
Query: 58 SVLASR-TVDSPGSKRDSGPVSRRRGGPSSLYVRPSLSDMKKDKAVMREKVYEFLRGIGV 116
SVL R DS R VSR + +RP + D + E++ R
Sbjct: 164 SVLPPRGDTDSAADTRKLRAVSRVSELDTEGALRPQ-TLYLLDLGLNLEQIKTITRKFAA 222
Query: 117 VPD-ELDGLELPVTVDVMRERVDFLHSLGLTIEDINNY----PLVLGCSVKKNMIPVLDF 171
P LDG PV V+FL LG+ DI P + G S+ N+ P + F
Sbjct: 223 FPYYSLDGKIKPV--------VEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAF 274
Query: 172 LGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXE-GM------------------- 211
L LG+ K+ + + + R+P + G+
Sbjct: 275 LETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYS 334
Query: 212 ---DIRPN---------DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLT 259
+RP D+ +L R P+ G +E + + + G G E+G +++
Sbjct: 335 VEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMIS 394
Query: 260 RYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEF 319
RY + + + P +Y +++ P+ + + P G+ L E++KP + ++
Sbjct: 395 RYGALYTFSLKENVMPKWDYFQTMDYPKSELVKF----PQFFGYSLQERIKPRYELVQRS 450
Query: 320 NVR 322
VR
Sbjct: 451 GVR 453
>AT5G55580.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:22515601-22517408 FORWARD
LENGTH=496
Length = 496
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 166 IPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERY 225
+P+LD+L G+++S F Q +R+ M ++ ER
Sbjct: 185 VPLLDYLSTFGLKESHFVQMYERH---------------------MPSLQINVFSAQER- 222
Query: 226 PELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGI 285
+ YL+ +GV R++ +L R P+IL V +K + +L LGI
Sbjct: 223 ---------------LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGI 267
Query: 286 PRLAVARLIENRPYILGFGLDEKVKPNVKSL-EEFNVRRTSLPSVIAQYPDIIGTDLKQK 344
P + +++ P + + ++ ++P ++ L EE ++ T + V+ P I+ L
Sbjct: 268 PNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDIT 327
Query: 345 LLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLS-SGPLLMHVDFLKDCGFSSQQMGKMIV 403
+ L+ L + ++V+K PQ++ S L ++FL+ G + + K++
Sbjct: 328 WNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLT 387
Query: 404 GCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAK 458
Q+L+L + + +K + + E+ + L +P + + L+ I+PRH+ + +
Sbjct: 388 SLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVE 443
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 126 LPVTVDVMRERVDFLHSLGLTIEDIN----NYPLVLGCSVKKNMIPVLDFLGKLGVRKST 181
L + V +ER+D+L S+G+ DI P +L +V+ N+ + FL LG+ S
Sbjct: 212 LQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSK 271
Query: 182 FTQFLQRYPQXXXXXXXXXXX-XXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTS 240
Q + P E + I+ D+ +V++ P++L +L+ T +T
Sbjct: 272 IGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTR 331
Query: 241 VAYLIG-IGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPY 299
+L +G R + ++ ++P++L + P + +L S+G+ + +++ +
Sbjct: 332 YMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQ 391
Query: 300 ILGFGLDEKVKPNVKSL-EEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
+L L++ +KP L E N + ++ +YP + L Q++
Sbjct: 392 VLSLSLEDNLKPKYMYLVNELN----NEVHILTKYPMYLSLSLDQRI 434
>AT2G34620.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:14577196-14578203 FORWARD
LENGTH=303
Length = 303
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 41/264 (15%)
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
D + L P L L+ S + +L G+ +L +L P+IL V + P
Sbjct: 68 DSGKALSLNPCLCSAPLDSIQSV-LHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPV 126
Query: 277 VEYLES-LGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPD 335
+L + L +P A R+I+ P +L +++++KP + L+ ++ L ++ Q P
Sbjct: 127 FMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLK--DLEALAYQDPI 184
Query: 336 IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSS 395
++ + ++ L+ + + FL+ GFS
Sbjct: 185 LLVSSVEHTLIPK------------------------------------LRFLESIGFSR 208
Query: 396 QQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHK 454
+ MI+ CP L I N K D+F E+ LE+L FP +F + LE IKPRH
Sbjct: 209 PEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHL 268
Query: 455 MVAKKGLKCSLSWMLNCSNEKFEQ 478
++GL+ LS ML ++E+FEQ
Sbjct: 269 ESMERGLELPLSLMLKSTDEEFEQ 292
>AT2G03050.1 | Symbols: EMB93, SOLDAT10 | Mitochondrial
transcription termination factor family protein |
chr2:900094-900945 REVERSE LENGTH=283
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 280 LESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSL-EEFNVRRTSLPSVIAQYPDIIG 338
L S G+ R AV R+++ P +L + ++ P ++ L E ++ +P I++ P ++
Sbjct: 71 LSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLI 130
Query: 339 TDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSG---PLLMHVDFLKD-CGFS 394
+ + +L + L ++ GR V L S L+ +++L++ GF+
Sbjct: 131 SSVDYQLRPALTFLKTL-----GFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFT 185
Query: 395 SQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH 453
+++ KM+V P LL + N + +FF EM +++L FP +F++ LE IKPRH
Sbjct: 186 REEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRH 245
Query: 454 KMVAKKGLKCSLSWMLNCSNEKFEQRM 480
+++ + G+ LS ML S+ +F +
Sbjct: 246 RLLKEHGILMPLSEMLKVSDGQFNHWL 272
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 47/314 (14%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ I ++ YP+LL E ++ + +L G E+ +++ PEILG + + I
Sbjct: 99 SQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISV 158
Query: 276 FVEY---------------------------------LESLGIP-RLAVARLIENRPYIL 301
+ ++ L LG+P +L + LI + +
Sbjct: 159 YYDFIKDTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVC 218
Query: 302 GFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPE 361
G EK + +K + E T+ S + +I + +K + ++ L L D
Sbjct: 219 G---KEKFEETLKKVVEMGFDPTT--SKFVEALQVI-YKMNEKTIEEKVHLYKSLGFDVG 272
Query: 362 DFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFD 421
D +K P + +S +L ++ GFS + KM+ P + L +K +
Sbjct: 273 DVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTE 332
Query: 422 FFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH---KMVAKKGLKC----SLSWMLNCSNE 474
F +M PL+ +V+ PA F Y LE I PR K + KGL S+S +L C+ +
Sbjct: 333 FLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQ 392
Query: 475 KFEQRMDYDTIDME 488
F R + +D +
Sbjct: 393 VFLNRYVANHVDKQ 406
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 47/314 (14%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ I ++ YP+LL E ++ + +L G E+ +++ PEILG + + I
Sbjct: 99 SQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISV 158
Query: 276 FVEY---------------------------------LESLGIP-RLAVARLIENRPYIL 301
+ ++ L LG+P +L + LI + +
Sbjct: 159 YYDFIKDTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVC 218
Query: 302 GFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPE 361
G EK + +K + E T+ S + +I + +K + ++ L L D
Sbjct: 219 G---KEKFEETLKKVVEMGFDPTT--SKFVEALQVI-YKMNEKTIEEKVHLYKSLGFDVG 272
Query: 362 DFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFD 421
D +K P + +S +L ++ GFS + KM+ P + L +K +
Sbjct: 273 DVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTE 332
Query: 422 FFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH---KMVAKKGLKC----SLSWMLNCSNE 474
F +M PL+ +V+ PA F Y LE I PR K + KGL S+S +L C+ +
Sbjct: 333 FLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQ 392
Query: 475 KFEQRMDYDTIDME 488
F R + +D +
Sbjct: 393 VFLNRYVANHVDKQ 406
>AT3G18870.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:6508515-6509339 REVERSE
LENGTH=274
Length = 274
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 329 VIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFL 388
+I P+I+ +D++ L R L + +L + R + V++ L + FL
Sbjct: 123 LIVNCPNILFSDVEYCL---RPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFL 179
Query: 389 KDCGFSSQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLES 447
K GF ++ ++ P + + + ++ F+F +M R LE+L FP +F + L
Sbjct: 180 KSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGK 239
Query: 448 TIKPRHKMVAKKGLKCSLSWMLNCSNEKFEQRM 480
I+PRH + KK ++ SLS ML ++KF +
Sbjct: 240 RIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSKW 272
>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
| chr5:21988544-21990183 FORWARD LENGTH=500
Length = 500
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 256 GVLTRYPEILGMRVGRVIKPFVEYLESL-GIPRLAVARLIENRPYILGFGLDEKVKPNVK 314
G++ R P IL + + P V+++ +L G A ++ P IL + + E + V+
Sbjct: 233 GIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV-EHMNGQVE 291
Query: 315 SLEEF-NVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQV 373
L+ F + + ++ +P++I T ++KL + L D + + K P +
Sbjct: 292 FLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKEC-GFDSPGMFKFLSKAPLI 350
Query: 374 VSLSSGPLLMHVDFLKDCGF-----------------SSQQMGKMI-------------- 402
++LS L + FL G+ SS M ++I
Sbjct: 351 LALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDIL 410
Query: 403 ---VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAK- 458
PQ+L + ++ ++ MGR +E+L+ FPAF Y L+S IK R++ K
Sbjct: 411 AMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKS 470
Query: 459 KGLKCSLSWMLNCSNEKFEQRMD 481
+G SL+ +L S E+F + D
Sbjct: 471 RGENMSLNKLLTVSAERFSKAAD 493
>AT2G36000.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:15117181-15118182 FORWARD
LENGTH=333
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 243 YLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLES--LGIPRLAVARLIENRPYI 300
YL +G+ + ++ R+P +L + ++ V+Y+ + + RL+ P +
Sbjct: 79 YLDSLGI---DFLTLINRHPPLLSTALS-AVESVVDYMTTPPINFTLQDFRRLVSMCPEL 134
Query: 301 LGFGLDEKVKPNVKSL-EEFNVRRT-SLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDL 358
L L P + L E V L + + P ++ + +L L + L
Sbjct: 135 LTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGIL 194
Query: 359 DPEDFGRIVEKMPQVVSLS-SGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDI-NIM 416
DP K ++S S L+ +D+ + GFS + M PQL I
Sbjct: 195 DPH-------KHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENY 247
Query: 417 KLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSNEKF 476
+ + +EMGR + +++ FP +F++ LE+ IKPRH+ A KG++ L ML + F
Sbjct: 248 EPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307
Query: 477 EQRMD 481
++
Sbjct: 308 RDTLE 312
>AT2G36000.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:15117181-15118333 FORWARD
LENGTH=318
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 243 YLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLES--LGIPRLAVARLIENRPYI 300
YL +G+ + ++ R+P +L + ++ V+Y+ + + RL+ P +
Sbjct: 79 YLDSLGI---DFLTLINRHPPLLSTALS-AVESVVDYMTTPPINFTLQDFRRLVSMCPEL 134
Query: 301 LGFGLDEKVKPNVKSL-EEFNVRRT-SLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDL 358
L L P + L E V L + + P ++ + +L L + L
Sbjct: 135 LTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGIL 194
Query: 359 DPEDFGRIVEKMPQVVSLS-SGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDI-NIM 416
DP K ++S S L+ +D+ + GFS + M PQL I
Sbjct: 195 DPH-------KHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENY 247
Query: 417 KLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSNEKF 476
+ + +EMGR + +++ FP +F++ LE+ IKPRH+ A KG++ L ML + F
Sbjct: 248 EPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307
Query: 477 EQRMD 481
++
Sbjct: 308 RDTLE 312
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 110/285 (38%), Gaps = 45/285 (15%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ I ++ +P LL E +++ + +L IG EL ++ P+ILG R G+ +
Sbjct: 103 SQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSR 162
Query: 276 FVEY-----------------------------------LESLGIP-RLAVARLIENRPY 299
+ ++ L +G+P RL + LI +
Sbjct: 163 YYDFVKVIIEADKSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGD 222
Query: 300 ILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLD 359
+ G EK K ++K E T+ V A + L K + + L L
Sbjct: 223 VCG---KEKFKESLKKAVEIGFDPTTATFVKALN---VLYGLSDKGIENKFNACKRLGLA 276
Query: 360 PEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLS 419
+D + +K P +++ S + V+ GFS + M+ PQ + +MK
Sbjct: 277 VDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTK 336
Query: 420 FDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH---KMVAKKGL 461
+F EM PL+ + + P Y LE PR K++ KGL
Sbjct: 337 TEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGL 381
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 7/244 (2%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
I + + +P ++ + +E + + + IG LG +++ ++G+ + + + P
Sbjct: 86 TQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIP 145
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKV--KPNVKSLEEFNVRRTSLPSVIAQY 333
VE L+S+ P+ +I +R L D + PN+ LE + + L S++ +
Sbjct: 146 TVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQ 205
Query: 334 PDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGR-IVEKMPQVVSLSSGPLLMHVDFLKDCG 392
P I ++KL R ++ LDL R +V + + SLS V G
Sbjct: 206 PRIFNLS-EEKL---RGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANG 261
Query: 393 FSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
FS ++ +I P L+ + + L F+F+ MG E L P +Y LE + PR
Sbjct: 262 FSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPR 321
Query: 453 HKMV 456
K++
Sbjct: 322 LKVL 325
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
N++ V +++P L + E + L +G+ + E+ V+ +YPE +G +++K
Sbjct: 270 NEVWAVFKKWPFSLKYS-EKNIIQKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKS 328
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLP-SVIAQYP 334
+LE LG + V +I+ P +G D +VK EF V+ P V+A P
Sbjct: 329 VKTFLE-LGFTKDEVLMIIKRHPQCIGLAAD-----SVKKKTEFLVKTMGWPLKVVASTP 382
Query: 335 DIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLK 389
++G L++ +L + +V+ +++ ++ +MP + S+ + P L FLK
Sbjct: 383 IVLGFSLEKFVLPRCNVIKALMS------NGLIGEMPAISSVLTSPKL---KFLK 428
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 361 EDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSF 420
+D +++K PQ ++ S ++ ++ GFS ++ + PQ L L +K
Sbjct: 312 DDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKT 371
Query: 421 DFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSL-------SWMLNCSN 473
+F +M PL+ +V+ PA Y LE PR ++ K SL S +L C+N
Sbjct: 372 EFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTN 431
Query: 474 EKF 476
E+F
Sbjct: 432 EEF 434
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 44/301 (14%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRV------ 269
+ I ++ YP LL + + + L G E+ +++ P ILG +
Sbjct: 99 SQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVYYD 158
Query: 270 ---------------------GRVIKPFVEYLESLGIP-RLAVARLIENRPYILGFGLDE 307
G I+ V L LG+P RL + L+ + G E
Sbjct: 159 AVKDIIVADTSSSYELPQGSQGNKIRN-VSALRELGMPSRLLLPLLVSKSQPVCG---KE 214
Query: 308 KVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIV 367
++K + E T+ V+A + + +K + ++ V+ L +D I
Sbjct: 215 NFDASLKKVVEMGFDPTTTKFVLALR---MLYQMSEKTIEEKVVVFRSLGFTVDDVWEIF 271
Query: 368 EKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEM 427
+K P V+ +S +L + D G+S + M+ P + + +K +F +M
Sbjct: 272 KKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKM 331
Query: 428 GRPLEDLVTFPAFFTYGLESTIKPR--------HKMVAKKGLKC-SLSWMLNCSNEKFEQ 478
P LV P F Y +E I PR K + +KG + ++S +L+C++E F
Sbjct: 332 KWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLD 391
Query: 479 R 479
R
Sbjct: 392 R 392
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 366 IVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHM 425
+++K PQ + S +L ++ GFS + M+ PQ L L +K +F
Sbjct: 314 VLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVK 373
Query: 426 EMGRPLEDLVTFPAFFTYGLESTIKPR----HKMVAKKGLKCS------LSWMLNCSNEK 475
+M PL+D+V+ P Y LE PR +++K+ L + +S +L C++E
Sbjct: 374 KMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDEL 433
Query: 476 FEQRMDYDTIDME 488
F +R + D E
Sbjct: 434 FLKRYVRNHGDKE 446
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 23/251 (9%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRV--GRVI 273
++I ++ R P L + + ++ L +G+ +L +L P R+ I
Sbjct: 95 DEISKLFTRRPALQRANV-AQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRLVLDERI 153
Query: 274 KPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQY 333
F+E L S + R R+I P ++ + LD+K+KP ++ + + L +++
Sbjct: 154 NYFMEILGSKEVLR----RVIIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISR 209
Query: 334 PDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVE-KMPQVVSLSSGPLLMH-----VDF 387
P +I R+ N+ E G E KM + V++ G M V
Sbjct: 210 PTLIP----------RTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVSRMETIEEKVRN 259
Query: 388 LKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLES 447
L+ GFS +++ + CP LL+L + ++ + F M P +V P LES
Sbjct: 260 LEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLES 319
Query: 448 TIKPRHKMVAK 458
+KPR +V +
Sbjct: 320 RLKPRADLVKR 330