Miyakogusa Predicted Gene

Lj2g3v2184480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2184480.1 Non Chatacterized Hit- tr|E1ZAR5|E1ZAR5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.83,3e-16,RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP5,NULL;
OCTANOYLTRANSFERASE,NULL; RNase_P_Rpp14,Ribonuclease ,CUFF.38707.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04635.1 | Symbols: EMB1687 | ribonuclease P family protein /...   204   3e-53

>AT1G04635.1 | Symbols: EMB1687 | ribonuclease P family protein /
           Rpp14 family protein | chr1:1291350-1291805 FORWARD
           LENGTH=151
          Length = 151

 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 92/155 (59%), Positives = 126/155 (81%), Gaps = 5/155 (3%)

Query: 1   MVAFKNRYMVMEVFANPNNDQVG-GDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQ 59
           MV FKNRYM+MEVF +P+ D +G G P+I+TQFN++KAIKDSILVNFGECGL SSLGS Q
Sbjct: 1   MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60

Query: 60  VKYVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCE 119
           VKYVNPIT +CI+R+SRE+++ VW AIT+V+SIGN PV+ N+LD+SG ++AC+  ALKC+
Sbjct: 61  VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120

Query: 120 ESKFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           + KFEQ         S+++  ++N+ L++IK+LE+
Sbjct: 121 KEKFEQ----CSKSLSEEEIRQMNTSLEKIKLLEN 151