Miyakogusa Predicted Gene

Lj2g3v2183200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2183200.1 Non Chatacterized Hit- tr|D8S0M5|D8S0M5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.21,0.0000000008,seg,NULL; no description,NULL; C2 domain
(Calcium/lipid-binding domain, CaLB),C2
calcium/lipid-bindi,CUFF.38692.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40815.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   181   9e-46
AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    64   1e-10
AT3G04360.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    53   3e-07
AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    49   6e-06

>AT2G40815.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:17034736-17036110 REVERSE
           LENGTH=367
          Length = 367

 Score =  181 bits (458), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 134/220 (60%), Gaps = 26/220 (11%)

Query: 1   MAKIWVEICLISARGVKGP----PSLWKRQWYAVGWVDPSTKYCTKFDASGNANPVWRTK 56
           M KI VEIC+ISARG++       SL K QWYAVGW+DP  KYCT  DAS   NPVWRTK
Sbjct: 1   MGKILVEICMISARGLRVGIGIGSSLLKHQWYAVGWLDPEDKYCTTIDASRADNPVWRTK 60

Query: 57  FAVQVDSEVPNFKDLSLNVEVYSRDPVFFTEKLHGSATVLLKEFLA--KQLQSSGIPRNE 114
           FA  +D        L+L VEVYSR+P+F  ++LHGSATV LKEFL   KQ QSS     E
Sbjct: 61  FATLLDDSTIQDSKLALQVEVYSREPLFLRKRLHGSATVSLKEFLTKYKQQQSSSKAVIE 120

Query: 115 EVGSYQLRKKKSNKPSGFVDVSIRVFEDKEEVDSHPGEGGGILLSDHGNKGRFGQAYPHQ 174
           E GSYQLRK  S+KP GFVDVSIR+  ++E+     G+ GG++LS++ +    GQ Y   
Sbjct: 121 ETGSYQLRKTNSSKPQGFVDVSIRISAEREDFGGFTGDFGGVMLSNNSDYNTSGQDY--- 177

Query: 175 MAPASFHGPEKQAQINTPYSHPVPF-PANYSNPYVGGPSY 213
           MA +S +                PF P + SNP+   PSY
Sbjct: 178 MAGSSQY----------------PFAPMDQSNPFSVPPSY 201


>AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr4:506783-507535 REVERSE
           LENGTH=250
          Length = 250

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 6   VEICLISARGVKGPPSLWKR-QWYAVGWVDPSTKYCTKFDASGNANPVWRTKFAVQVDSE 64
           +EI LISA+G+K P    +R Q YA  WVD S+K  T+ D  G+ NP+W  KF  QV  E
Sbjct: 7   LEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVSPE 66

Query: 65  VPNFKDLSLNVEVYSRDPVFFTEKLHGSATVLLKEFL 101
             + +   +++E+Y+    +  + L G+   L+  FL
Sbjct: 67  FLSSETSGVSIEIYAVG--YLRDHLIGTVRFLVSNFL 101


>AT3G04360.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr3:1157025-1158200 REVERSE
           LENGTH=391
          Length = 391

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 6   VEICLISARGVKGPPSLWKRQWYAVGWV--DPSTKYCTKFDASGNANPVWRTKFAVQVDS 63
           +EI LISA+ +   P     + Y+V W+  DP  K  T+ D S  ANP+W  KF  +V+ 
Sbjct: 11  LEINLISAQDL--APVSRNMKTYSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFRVND 68

Query: 64  EVPNFKDLSLNVEVYSRDPVFFTEKLHGSATVLLKEFLA 102
           ++      ++ +E+Y+    +  + L G+  VLL +  A
Sbjct: 69  KILYVDASAIVIEIYA--AAWAKDALVGTVNVLLSDLFA 105


>AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:14119526-14121334 REVERSE
           LENGTH=602
          Length = 602

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 16/146 (10%)

Query: 6   VEICLISARGVKGPPSLWKRQWYAVGWVDPSTKYCTKFDASGNANPVWRTKFAVQVDSEV 65
           +E+ +ISA+ +   P   K + YAV WV    K  T+ D +G  NP W  KF  +V  + 
Sbjct: 10  LELNIISAQDLA--PVSRKMKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRVSEDF 67

Query: 66  PNFKDLSLNVEVYSRDPVFFTEKLHGSATVLLKEFLAKQLQSSGIPRNEEVG-------- 117
                 ++ VE+Y+    +F +   G+  VL+   +    +  G   NEE          
Sbjct: 68  LYADTSAVVVEIYALH--WFRDVHVGTVRVLISNLIPPN-RRPGYRSNEEYRRTPPPGMR 124

Query: 118 --SYQLRKKKSNKPSGFVDVSIRVFE 141
             + Q+R + S +P G +++ + + +
Sbjct: 125 FVALQVR-RPSGRPQGILNIGVGILD 149