Miyakogusa Predicted Gene
- Lj2g3v2171880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2171880.1 Non Chatacterized Hit- tr|D7LYB7|D7LYB7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,58.21,8e-18,seg,NULL; DUF3133,Protein of unknown function
DUF3133; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.38808.1
(1099 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05190.1 | Symbols: | Protein of unknown function (DUF3133) ... 99 2e-20
AT3G56410.1 | Symbols: | Protein of unknown function (DUF3133) ... 70 7e-12
AT3G56410.2 | Symbols: | Protein of unknown function (DUF3133) ... 70 7e-12
AT1G01440.1 | Symbols: | Protein of unknown function (DUF3133) ... 66 2e-10
AT3G61670.1 | Symbols: | Protein of unknown function (DUF3133) ... 58 3e-08
AT2G46380.1 | Symbols: | Protein of unknown function (DUF3133) ... 57 1e-07
AT4G01090.1 | Symbols: | Protein of unknown function (DUF3133) ... 55 4e-07
>AT5G05190.1 | Symbols: | Protein of unknown function (DUF3133) |
chr5:1541853-1543875 FORWARD LENGTH=615
Length = 615
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%)
Query: 867 FREKPSLTRRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVLKFSL 926
RE+ + +RH RP AGGAPFV+CY CS+ LQLP DFL+FKR L+CG C VL+FSL
Sbjct: 479 LRERQRVAKRHVRPTAGGAPFVSCYSCSENLQLPVDFLIFKRKHHLLRCGTCTTVLRFSL 538
Query: 927 QNRSHIV 933
Q+R+H+V
Sbjct: 539 QSRNHLV 545
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 1 MSGESAPKPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQAKKR 44
M+ ++ K RLV CPKC ++L E D VY+CGGC ILQAK+R
Sbjct: 1 MASQTGQKIRLVRCPKCLKILQEDEDVPVYQCGGCSAILQAKRR 44
>AT3G56410.1 | Symbols: | Protein of unknown function (DUF3133) |
chr3:20916320-20920877 REVERSE LENGTH=1488
Length = 1488
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 864 RSYFREKPSLTRRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVLK 923
+ Y RE+ + +RH P AGGAPF TC C +LLQLP KR +++CG C VLK
Sbjct: 312 KRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLK 371
Query: 924 FSLQNRSHIVSYAPNGL--GPKSSDLNDQNEMIDGSHPHSESHANHCHSSNADPISYSDD 981
FS++ ++ V +P+ + G +D N S H E + + H + D DD
Sbjct: 372 FSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLD-----DD 426
Query: 982 YDNSVVKS 989
++ KS
Sbjct: 427 SGETICKS 434
>AT3G56410.2 | Symbols: | Protein of unknown function (DUF3133) |
chr3:20916320-20921134 REVERSE LENGTH=1535
Length = 1535
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 864 RSYFREKPSLTRRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVLK 923
+ Y RE+ + +RH P AGGAPF TC C +LLQLP KR +++CG C VLK
Sbjct: 359 KRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLK 418
Query: 924 FSLQNRSHIVSYAPNGL--GPKSSDLNDQNEMIDGSHPHSESHANHCHSSNADPISYSDD 981
FS++ ++ V +P+ + G +D N S H E + + H + D DD
Sbjct: 419 FSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLD-----DD 473
Query: 982 YDNSVVKS 989
++ KS
Sbjct: 474 SGETICKS 481
>AT1G01440.1 | Symbols: | Protein of unknown function (DUF3133) |
chr1:159935-162219 REVERSE LENGTH=664
Length = 664
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 840 FTTSKPVHGRETKSCDQRLRAPEMRSYFREKPSLT-RRHCRPVAGGAPFVTCYKCSKLLQ 898
F+ VH R D + R Y ++ S T R C P+AGGAPF+ C+ C +LL
Sbjct: 232 FSPHGGVHTRWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLY 291
Query: 899 LPADFLLFKRVCSELKCGECQEVLKFSLQNRSHIVS 934
+P LL + +++CG C EV+ F + ++ + S
Sbjct: 292 VPKKKLLGQERQQKMQCGACSEVITFRVVDKKLVFS 327
>AT3G61670.1 | Symbols: | Protein of unknown function (DUF3133) |
chr3:22819052-22821870 FORWARD LENGTH=790
Length = 790
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 793 FHCYPQE-WQCSGEFPPHV-----LYQHEELYRPHPGHNXXXXXXXXXXXXQWFTTSKPV 846
+HCY + W+ S P Y HE + P HN + +
Sbjct: 331 YHCYDNKYWRGSAPVVPDAPYNAGFYPHESVMGFAPPHNPRT----------YGSRGLQP 380
Query: 847 HGRETKSCDQRLRAPEMRSYFREKP-----SLTRRHCRPVAGGAPFVTCYKCSKLLQLPA 901
HGR + +M + R +P S RH RP+AGGAPF+TC C +LLQLP
Sbjct: 381 HGRWPSN----FSDAQMDALSRIRPPKVVLSGGSRHIRPLAGGAPFITCQNCFELLQLPK 436
Query: 902 DFLLFKRVCSELKCGECQEVLKFSLQNRSHIVS 934
+ +++CG C ++ S+ N ++S
Sbjct: 437 KPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLS 469
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 8 KPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQAKKRRSRAVNSESSSLQTDATPTNASN 67
K RLV CPKC LL E D ++CGGC T+L+AK + A + S++ A P +AS+
Sbjct: 6 KVRLVRCPKCENLLSEPEDSPFFQCGGCFTVLRAKTKEREADSVSVKSVEDTAKPVSASS 65
Query: 68 P 68
P
Sbjct: 66 P 66
>AT2G46380.1 | Symbols: | Protein of unknown function (DUF3133) |
chr2:19039377-19042171 FORWARD LENGTH=768
Length = 768
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 876 RHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVLKFSLQNRSHIVSY 935
R +PVAGGAPF+ C C KLL+LP R ++CG C V+ +S ++ I+S
Sbjct: 376 RLIQPVAGGAPFINCINCFKLLKLPEKIDSATRKKQRMRCGACSCVIDYSFVDKKLILST 435
Query: 936 AP 937
P
Sbjct: 436 DP 437
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 1 MSGESAPKPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQAKKR 44
M+ S + RLV CPKC+ LL E D ++CGGCGT+L AK +
Sbjct: 1 MAESSTIEARLVRCPKCKNLLQEPKDCPFFQCGGCGTVLCAKNK 44
>AT4G01090.1 | Symbols: | Protein of unknown function (DUF3133) |
chr4:470834-473248 REVERSE LENGTH=714
Length = 714
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 864 RSYFREKPSLT-RRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVL 922
R Y ++ S T R C P+AGGAPF+ C+ C +LL LP LL + +L+CG C EV+
Sbjct: 295 RGYVKKAVSDTGVRRCHPLAGGAPFIACHSCFELLYLPKKKLLSQERLHKLQCGACSEVI 354
Query: 923 KFSLQNRSHIVSYAPNGLGPKSSDLNDQN 951
F++ +R + S P S ++ D+N
Sbjct: 355 SFTIVDRKLVFSSGNEETKPVSLEVEDRN 383